logo

Overview

ID MAG00002
Name BYD1_bin.11
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-39
Genus SCGC-AG-212-J23
Species
Assembly information
Completeness (%) 91.2
Contamination (%) 8.08
GC content (%) 68.0
N50 (bp) 12,642
Genome size (bp) 3,684,615

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3924

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10004742_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 456.0
BYD1_k127_10004742_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 434.0
BYD1_k127_10004742_2 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 452.0
BYD1_k127_10004742_3 Methionine aminopeptidase K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 419.0
BYD1_k127_10004742_4 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 395.0
BYD1_k127_10004742_5 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 376.0
BYD1_k127_10004742_6 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 359.0
BYD1_k127_10004742_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 310.0
BYD1_k127_10004742_8 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001619 259.0
BYD1_k127_10004742_9 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000001397 175.0
BYD1_k127_10026187_0 Transport permease protein K09688,K09690,K09692 - - 0.00000000000000000000000000000000000000000000000000000000002661 218.0
BYD1_k127_10026187_1 Wzt C-terminal domain K09691 - - 0.0000000000000000000000000000000000000000000000000000000004736 219.0
BYD1_k127_10026187_2 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000001824 98.0
BYD1_k127_1004308_0 Protein of unknown function (DUF521) K09123 - - 2.687e-201 637.0
BYD1_k127_1004308_1 Belongs to the IlvD Edd family - - - 9.919e-198 646.0
BYD1_k127_1004308_10 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000000000000000000000000000000000000000659 233.0
BYD1_k127_1004308_11 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000002216 230.0
BYD1_k127_1004308_12 COG1247 Sortase and related acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000005328 211.0
BYD1_k127_1004308_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000006018 156.0
BYD1_k127_1004308_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000001252 76.0
BYD1_k127_1004308_15 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000001566 81.0
BYD1_k127_1004308_16 - - - - 0.0000000000209 65.0
BYD1_k127_1004308_17 protein conserved in bacteria - - - 0.000000005706 59.0
BYD1_k127_1004308_18 Glycine zipper 2TM domain K04062 - - 0.000002815 55.0
BYD1_k127_1004308_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 599.0
BYD1_k127_1004308_3 Glucose inhibited division protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 562.0
BYD1_k127_1004308_4 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 448.0
BYD1_k127_1004308_5 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 373.0
BYD1_k127_1004308_6 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 350.0
BYD1_k127_1004308_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 288.0
BYD1_k127_1004308_8 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001061 289.0
BYD1_k127_1004308_9 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
BYD1_k127_10087470_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 8.779e-239 754.0
BYD1_k127_10087470_1 Belongs to the thiolase family K00626 - 2.3.1.9 5.296e-202 637.0
BYD1_k127_10087470_2 Thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000000000000000004113 177.0
BYD1_k127_10087470_3 Sulfite exporter TauE/SafE K07090 - - 0.0000000002473 66.0
BYD1_k127_10157382_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 358.0
BYD1_k127_10157382_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004255 304.0
BYD1_k127_10157382_2 Isochorismatase family K09020 - 3.5.1.110 0.0000000000000000000000000000000000000000000000000000000000000000001188 237.0
BYD1_k127_10157382_3 LemA family K03744 - - 0.0000000000000000000000326 108.0
BYD1_k127_10190354_0 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 1.63e-300 940.0
BYD1_k127_10190354_1 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 1.665e-289 901.0
BYD1_k127_10190354_2 hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 497.0
BYD1_k127_10190354_3 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 465.0
BYD1_k127_10190354_4 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 458.0
BYD1_k127_10190354_5 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001266 277.0
BYD1_k127_10190354_6 Cysteine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 262.0
BYD1_k127_10190354_7 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000001969 195.0
BYD1_k127_10190354_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000001163 159.0
BYD1_k127_10190354_9 - - - - 0.000000000000000000000000000000001565 136.0
BYD1_k127_10272693_0 Class II Aldolase and Adducin N-terminal domain - - - 1.479e-270 849.0
BYD1_k127_10272693_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.661e-205 658.0
BYD1_k127_10272693_10 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000004788 237.0
BYD1_k127_10272693_11 dna polymerase iii K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000006911 221.0
BYD1_k127_10272693_12 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000001155 216.0
BYD1_k127_10272693_13 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000005134 201.0
BYD1_k127_10272693_14 Fumarylacetoacetate (FAA) hydrolase family K01617 - 4.1.1.77 0.00000000000000000000000000000000000000000000000000741 195.0
BYD1_k127_10272693_15 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000001423 188.0
BYD1_k127_10272693_16 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000696 161.0
BYD1_k127_10272693_17 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.0000000000000000000000000000000000000002332 154.0
BYD1_k127_10272693_18 Protein of unknown function (DUF1178) - - - 0.00000000000000000000000000000000206 134.0
BYD1_k127_10272693_19 Domain of unknown function (DUF4936) - - - 0.0000007222 60.0
BYD1_k127_10272693_2 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 572.0
BYD1_k127_10272693_20 - - - - 0.00008419 48.0
BYD1_k127_10272693_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 569.0
BYD1_k127_10272693_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008343 452.0
BYD1_k127_10272693_5 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 396.0
BYD1_k127_10272693_6 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 379.0
BYD1_k127_10272693_7 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 296.0
BYD1_k127_10272693_8 Transcriptional regulatory protein, C terminal K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002003 277.0
BYD1_k127_10272693_9 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 GO:0000334,GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0044237,GO:0044248,GO:0051213,GO:0055114 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000004338 238.0
BYD1_k127_10281191_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 4.738e-237 741.0
BYD1_k127_10281191_1 Soluble lytic murein transglycosylase L domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 571.0
BYD1_k127_10281191_2 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 355.0
BYD1_k127_10281191_3 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 316.0
BYD1_k127_10281191_4 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001145 262.0
BYD1_k127_10281191_5 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001437 247.0
BYD1_k127_10281191_6 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.00000000000000000000000000000000000000000000000000006862 194.0
BYD1_k127_10281191_7 membrane - - - 0.0000000000003319 74.0
BYD1_k127_10281191_8 Protein of unknown function (DUF2877) - - - 0.000000002275 67.0
BYD1_k127_10281191_9 Protein of unknown function (DUF2905) - - - 0.0000005189 53.0
BYD1_k127_10282552_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.399e-201 637.0
BYD1_k127_10282552_1 Secretin and TonB N terminus short domain K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 575.0
BYD1_k127_10282552_2 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000002504 194.0
BYD1_k127_10282552_3 prepilin-type N-terminal cleavage methylation K02456 - - 0.0000000000000000000000000000000000000001043 165.0
BYD1_k127_10282552_4 - - - - 0.00000000000000000000000693 109.0
BYD1_k127_10282552_5 - - - - 0.0000000000000005439 84.0
BYD1_k127_10282552_6 Type II secretion system (T2SS), protein M subtype b - - - 0.00000000000000675 86.0
BYD1_k127_10304172_0 AMP-binding enzyme C-terminal domain K00666 - - 6.633e-256 809.0
BYD1_k127_10304172_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 7.335e-234 749.0
BYD1_k127_10304172_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 519.0
BYD1_k127_10304172_3 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 516.0
BYD1_k127_10304172_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 417.0
BYD1_k127_10304172_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 349.0
BYD1_k127_10304172_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001021 282.0
BYD1_k127_10304172_7 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007463 279.0
BYD1_k127_10304172_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000004491 229.0
BYD1_k127_10334349_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1385.0
BYD1_k127_10334349_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.175e-274 856.0
BYD1_k127_10334349_10 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009145 477.0
BYD1_k127_10334349_11 Mediates influx of magnesium ions K03284,K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 447.0
BYD1_k127_10334349_12 HD domain K13815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 419.0
BYD1_k127_10334349_13 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 404.0
BYD1_k127_10334349_14 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 399.0
BYD1_k127_10334349_15 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 386.0
BYD1_k127_10334349_16 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 381.0
BYD1_k127_10334349_17 Pfam Enoyl-CoA hydratase isomerase K13816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 345.0
BYD1_k127_10334349_18 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 319.0
BYD1_k127_10334349_19 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 302.0
BYD1_k127_10334349_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 2.188e-195 638.0
BYD1_k127_10334349_20 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 287.0
BYD1_k127_10334349_21 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001773 276.0
BYD1_k127_10334349_22 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000491 258.0
BYD1_k127_10334349_23 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000001618 243.0
BYD1_k127_10334349_24 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000004097 225.0
BYD1_k127_10334349_25 Helix-turn-helix domain protein - - - 0.00000000000000000000000000000000000000000000000000002684 196.0
BYD1_k127_10334349_26 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) - - - 0.00000000000000000000000000000000000000000000000001169 187.0
BYD1_k127_10334349_27 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000001187 183.0
BYD1_k127_10334349_28 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000004046 179.0
BYD1_k127_10334349_29 preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000000000006665 153.0
BYD1_k127_10334349_3 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 607.0
BYD1_k127_10334349_30 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000001295 140.0
BYD1_k127_10334349_31 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000433 98.0
BYD1_k127_10334349_32 FAD binding domain - - - 0.00000000000000000299 96.0
BYD1_k127_10334349_33 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000003096 73.0
BYD1_k127_10334349_34 Transcriptional regulator - - - 0.000000000153 69.0
BYD1_k127_10334349_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 578.0
BYD1_k127_10334349_5 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004825 597.0
BYD1_k127_10334349_6 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 550.0
BYD1_k127_10334349_7 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 544.0
BYD1_k127_10334349_8 Histidine Phosphotransfer domain K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 566.0
BYD1_k127_10334349_9 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 527.0
BYD1_k127_1033817_0 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000004558 212.0
BYD1_k127_1033817_1 2-Nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000001837 154.0
BYD1_k127_1033817_2 - - - - 0.00000000000005617 77.0
BYD1_k127_10340703_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 9.494e-281 871.0
BYD1_k127_10340703_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 4.028e-209 668.0
BYD1_k127_10340703_10 Sigma-54 interaction domain K07715 - - 0.0000000000000000003916 87.0
BYD1_k127_10340703_11 NfeD-like C-terminal, partner-binding - - - 0.000000000587 65.0
BYD1_k127_10340703_12 DNA-sulfur modification-associated - - - 0.00001521 57.0
BYD1_k127_10340703_13 Major Facilitator Superfamily - - - 0.00002502 56.0
BYD1_k127_10340703_14 - - - - 0.0002586 47.0
BYD1_k127_10340703_2 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 496.0
BYD1_k127_10340703_3 SMART band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 394.0
BYD1_k127_10340703_4 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007529 378.0
BYD1_k127_10340703_5 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 331.0
BYD1_k127_10340703_6 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 303.0
BYD1_k127_10340703_7 2-Keto-4-pentenoate hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000007535 224.0
BYD1_k127_10340703_8 Protein of unknown function (DUF1223) - - - 0.0000000000000000000000000000000000000000000000000000000000001096 224.0
BYD1_k127_10340703_9 Belongs to the LDH2 MDH2 oxidoreductase family K00073,K13574 - 1.1.1.350 0.00000000000000000000000000000001001 130.0
BYD1_k127_10348961_0 Metallopeptidase family M24 - - - 1.191e-205 652.0
BYD1_k127_10348961_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004832 378.0
BYD1_k127_10348961_10 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01032 - 2.8.3.6 0.00000000000000000001696 97.0
BYD1_k127_10348961_2 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01032 - 2.8.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009593 361.0
BYD1_k127_10348961_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 343.0
BYD1_k127_10348961_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 304.0
BYD1_k127_10348961_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008101 296.0
BYD1_k127_10348961_6 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000113 156.0
BYD1_k127_10348961_7 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.0000000000000000000000000000001436 126.0
BYD1_k127_10348961_8 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000002108 123.0
BYD1_k127_10348961_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000006507 98.0
BYD1_k127_10355176_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 8.269e-306 950.0
BYD1_k127_10355176_1 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 2.238e-262 854.0
BYD1_k127_10355176_10 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000007765 224.0
BYD1_k127_10355176_11 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000009631 208.0
BYD1_k127_10355176_12 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000005742 189.0
BYD1_k127_10355176_13 Yqey-like protein - - - 0.0000000000000000000000000000000000000000000000001771 180.0
BYD1_k127_10355176_14 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000005759 174.0
BYD1_k127_10355176_15 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000002982 128.0
BYD1_k127_10355176_16 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000003505 121.0
BYD1_k127_10355176_17 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.00000000000000000001387 91.0
BYD1_k127_10355176_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.384e-215 685.0
BYD1_k127_10355176_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 558.0
BYD1_k127_10355176_4 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005935 497.0
BYD1_k127_10355176_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 443.0
BYD1_k127_10355176_6 Tyrosine recombinase xerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 364.0
BYD1_k127_10355176_7 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 340.0
BYD1_k127_10355176_8 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000871 279.0
BYD1_k127_10355176_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000003299 228.0
BYD1_k127_10397351_0 4-hydroxyphenylacetate 3-hydroxylase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 587.0
BYD1_k127_10397351_1 Protein of unknown function (DUF2848) - - - 0.000000000000000000000000000000000000000000000000000000000000005618 222.0
BYD1_k127_10397351_2 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000007818 175.0
BYD1_k127_10434586_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 4.488e-223 713.0
BYD1_k127_10434586_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 332.0
BYD1_k127_10434586_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001735 280.0
BYD1_k127_1047197_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18902 - - 0.0 1351.0
BYD1_k127_1047197_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 437.0
BYD1_k127_1047197_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 385.0
BYD1_k127_1047197_3 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 312.0
BYD1_k127_1047197_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000146 137.0
BYD1_k127_1047197_5 response regulator, receiver - - - 0.00000000006546 70.0
BYD1_k127_10478766_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 2.335e-222 712.0
BYD1_k127_10478766_1 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000806 385.0
BYD1_k127_10478766_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008746 280.0
BYD1_k127_10478766_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007483 276.0
BYD1_k127_10478766_4 PFAM ADP-ribosylation Crystallin J1 - - - 0.00000000000000000000000000000000000000000000000000002039 197.0
BYD1_k127_10478766_5 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000002745 168.0
BYD1_k127_10478766_6 Protein chain release factor B K15034 - - 0.000000000000000000000000000000000000000001327 159.0
BYD1_k127_10478766_7 LemA family K03744 - - 0.0000000000000000000000000000000000009726 158.0
BYD1_k127_10478766_8 ribonuclease activity - GO:0005575,GO:0005576,GO:0006417,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 - 0.000000000000000000000000005615 114.0
BYD1_k127_10478766_9 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000000000000003558 78.0
BYD1_k127_1048625_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 2670.0
BYD1_k127_1048625_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000001974 218.0
BYD1_k127_1048625_2 BON domain K04065 - - 0.0000000000000000000000000000001114 128.0
BYD1_k127_1048625_3 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000002401 73.0
BYD1_k127_1048625_4 Crp Fnr family - - - 0.00000000000002527 73.0
BYD1_k127_10489426_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 4.781e-238 747.0
BYD1_k127_10489426_1 Peptidase M1 membrane alanine aminopeptidase - - - 5.108e-212 679.0
BYD1_k127_10489426_10 Pfam Hemerythrin HHE - - - 0.00000000003379 71.0
BYD1_k127_10489426_11 - - - - 0.0002689 46.0
BYD1_k127_10489426_2 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002473 463.0
BYD1_k127_10489426_3 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 391.0
BYD1_k127_10489426_4 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 409.0
BYD1_k127_10489426_5 Amidohydrolase K10220 - 4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 396.0
BYD1_k127_10489426_6 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 366.0
BYD1_k127_10489426_7 KR domain K07535 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 325.0
BYD1_k127_10489426_8 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002834 259.0
BYD1_k127_10489426_9 ferredoxin - - - 0.00000000000000000000000000000000004278 135.0
BYD1_k127_1050920_0 ribonuclease, Rne Rng family K08301 - - 8.998e-225 705.0
BYD1_k127_1050920_1 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 603.0
BYD1_k127_1050920_2 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 533.0
BYD1_k127_1050920_3 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000002801 225.0
BYD1_k127_1050920_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000001525 151.0
BYD1_k127_1050920_5 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000904 145.0
BYD1_k127_1050920_6 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000002043 129.0
BYD1_k127_10526306_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 464.0
BYD1_k127_10526306_1 histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 425.0
BYD1_k127_10526306_2 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 410.0
BYD1_k127_10526306_3 Rhodanese Homology Domain K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005021 405.0
BYD1_k127_10526306_4 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007242 268.0
BYD1_k127_10526306_5 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.00000000000000000000000000000000000000000000000000000000000007535 216.0
BYD1_k127_10543337_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1065.0
BYD1_k127_10543337_1 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.0 1026.0
BYD1_k127_10543337_10 Thioesterase - - - 0.00000000000000000000000000000000000003717 146.0
BYD1_k127_10543337_11 Forkhead associated domain - - - 0.0000000000000000000000000000000005098 146.0
BYD1_k127_10543337_2 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 559.0
BYD1_k127_10543337_3 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 521.0
BYD1_k127_10543337_4 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 491.0
BYD1_k127_10543337_5 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 316.0
BYD1_k127_10543337_6 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000001261 238.0
BYD1_k127_10543337_7 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000001367 205.0
BYD1_k127_10543337_8 NnrU protein - - - 0.0000000000000000000000000000000000000000000000201 179.0
BYD1_k127_10543337_9 Belongs to the globin family - - - 0.0000000000000000000000000000000000000002967 154.0
BYD1_k127_1056222_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.155e-249 778.0
BYD1_k127_1056222_1 Adenylate cyclase K01768 - 4.6.1.1 3.783e-223 705.0
BYD1_k127_1056222_10 Belongs to the PsiE family K13256 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000001505 195.0
BYD1_k127_1056222_11 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000009298 190.0
BYD1_k127_1056222_12 DsrE/DsrF-like family K06039 - - 0.00000000000000000000000000000002749 135.0
BYD1_k127_1056222_13 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000000000006015 134.0
BYD1_k127_1056222_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 547.0
BYD1_k127_1056222_3 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 385.0
BYD1_k127_1056222_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 375.0
BYD1_k127_1056222_5 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 309.0
BYD1_k127_1056222_6 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001825 304.0
BYD1_k127_1056222_7 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000008073 257.0
BYD1_k127_1056222_8 Acetolactate synthase small K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000099 253.0
BYD1_k127_1056222_9 transcriptional regulator, ArsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003141 266.0
BYD1_k127_10566928_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1048.0
BYD1_k127_10566928_1 Transcriptional regulatory protein, C terminal - - - 4.316e-282 880.0
BYD1_k127_10566928_10 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 464.0
BYD1_k127_10566928_11 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 434.0
BYD1_k127_10566928_12 two-component system sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 447.0
BYD1_k127_10566928_13 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 415.0
BYD1_k127_10566928_14 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 370.0
BYD1_k127_10566928_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009732 338.0
BYD1_k127_10566928_16 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 305.0
BYD1_k127_10566928_17 Uncharacterized conserved protein (DUF2183) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005521 278.0
BYD1_k127_10566928_18 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003359 267.0
BYD1_k127_10566928_19 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002475 256.0
BYD1_k127_10566928_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.412e-274 856.0
BYD1_k127_10566928_20 Bacterial periplasmic substrate-binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003829 258.0
BYD1_k127_10566928_21 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000002205 243.0
BYD1_k127_10566928_22 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000001735 237.0
BYD1_k127_10566928_23 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000000000003374 187.0
BYD1_k127_10566928_24 Cupin domain - - - 0.0000000000000000000000000000000000000000000000001336 179.0
BYD1_k127_10566928_25 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000001403 179.0
BYD1_k127_10566928_26 Branched-chain amino acid permease - - - 0.00000000000000000000000000000000000000000001292 170.0
BYD1_k127_10566928_27 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000001346 178.0
BYD1_k127_10566928_28 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.0000000000000000000000000000000000000156 150.0
BYD1_k127_10566928_29 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000001151 151.0
BYD1_k127_10566928_3 Insulinase (Peptidase family M16) K07263 - - 9.571e-268 852.0
BYD1_k127_10566928_30 Ring hydroxylating beta subunit K16320 - 1.14.12.1 0.000000000000000000000000000000000000229 149.0
BYD1_k127_10566928_31 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000000001549 127.0
BYD1_k127_10566928_32 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000001635 115.0
BYD1_k127_10566928_33 Acetyltransferase (GNAT) domain - - - 0.00000000000000000004069 102.0
BYD1_k127_10566928_34 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000001726 86.0
BYD1_k127_10566928_35 Domain of unknown function (DUF4398) - - - 0.000000000000009557 87.0
BYD1_k127_10566928_36 Branched-chain amino acid transport protein (AzlD) - - - 0.00000000000008508 82.0
BYD1_k127_10566928_37 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000002942 68.0
BYD1_k127_10566928_4 RecA-superfamily ATPases implicated in signal transduction K08482 - - 1.104e-206 653.0
BYD1_k127_10566928_5 Phospholipase D Transphosphatidylase K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 571.0
BYD1_k127_10566928_6 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 531.0
BYD1_k127_10566928_7 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 491.0
BYD1_k127_10566928_8 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 499.0
BYD1_k127_10566928_9 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit K16319,K18074 - 1.14.12.1,1.14.12.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 482.0
BYD1_k127_10596171_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1129.0
BYD1_k127_10596171_1 Belongs to the TPP enzyme family K01577 - 4.1.1.8 8.877e-310 957.0
BYD1_k127_10596171_10 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000000003788 157.0
BYD1_k127_10596171_11 CHASE2 K01768 - 4.6.1.1 0.000002452 51.0
BYD1_k127_10596171_12 crp fnr family K21564 - - 0.00007303 52.0
BYD1_k127_10596171_2 Tripartite tricarboxylate transporter TctA family K07793 - - 9.374e-245 767.0
BYD1_k127_10596171_3 CoA-transferase family III K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 569.0
BYD1_k127_10596171_4 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 442.0
BYD1_k127_10596171_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 403.0
BYD1_k127_10596171_6 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 368.0
BYD1_k127_10596171_7 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 340.0
BYD1_k127_10596171_8 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 333.0
BYD1_k127_10596171_9 (FHA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 304.0
BYD1_k127_10598230_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 501.0
BYD1_k127_10598230_1 Chitin synthase K14666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 462.0
BYD1_k127_10598230_2 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 322.0
BYD1_k127_10598230_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 316.0
BYD1_k127_10598230_4 Putative methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 321.0
BYD1_k127_10598230_5 Belongs to the FPP GGPP synthase family - - - 0.0000000000000000000000000000000000000000000000008617 192.0
BYD1_k127_10598230_6 Cold shock protein K03704 - - 0.0000000000000000000000000005937 114.0
BYD1_k127_10598230_7 Cytochrome P460 - - - 0.0000000002171 64.0
BYD1_k127_10687904_0 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004239 496.0
BYD1_k127_10687904_1 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 454.0
BYD1_k127_10687904_2 acid transport system permease K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 362.0
BYD1_k127_10687904_3 Alpha beta hydrolase fold - - - 0.0000000000000001012 80.0
BYD1_k127_10760756_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1174.0
BYD1_k127_10760756_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1012.0
BYD1_k127_10760756_10 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000001505 154.0
BYD1_k127_10760756_11 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000001717 126.0
BYD1_k127_10760756_12 Domain of unknown function (DUF4212) K14393 - - 0.000000000000000000000000000003336 123.0
BYD1_k127_10760756_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 1.426e-254 805.0
BYD1_k127_10760756_3 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 485.0
BYD1_k127_10760756_4 Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 389.0
BYD1_k127_10760756_5 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004917 280.0
BYD1_k127_10760756_6 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.000000000000000000000000000000000000000000000000000000000000000000001776 237.0
BYD1_k127_10760756_7 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000002851 232.0
BYD1_k127_10760756_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001383 234.0
BYD1_k127_10760756_9 LuxR family transcriptional regulator K13041 - - 0.00000000000000000000000000000000000000000000000000003083 205.0
BYD1_k127_10780980_0 Kef-type K transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 567.0
BYD1_k127_10780980_1 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000007069 232.0
BYD1_k127_10780980_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000003086 194.0
BYD1_k127_10780980_3 - - - - 0.00000000000000000000000000000000000000000001735 166.0
BYD1_k127_10780980_4 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000005112 152.0
BYD1_k127_10780980_5 Major Facilitator Superfamily - - - 0.000000006279 59.0
BYD1_k127_10780980_6 - - - - 0.00002976 46.0
BYD1_k127_10819188_0 FtsX-like permease family K02004 - - 4.797e-225 722.0
BYD1_k127_10819188_1 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.405e-221 700.0
BYD1_k127_10819188_10 membrane protein of uknown function UCP014873 - - - 0.000000002245 66.0
BYD1_k127_10819188_2 Amidohydrolase family - - - 3.648e-202 643.0
BYD1_k127_10819188_3 Epoxide hydrolase N terminus K01253 - 3.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 537.0
BYD1_k127_10819188_4 Thioredoxin-like K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006355 331.0
BYD1_k127_10819188_5 PFAM Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007351 258.0
BYD1_k127_10819188_6 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000003466 189.0
BYD1_k127_10819188_7 Belongs to the CinA family - - - 0.0000000000000000000000000000000000000000000000005153 181.0
BYD1_k127_10819188_8 thiolester hydrolase activity - - - 0.00000000000000000017 101.0
BYD1_k127_10819188_9 Rubrerythrin - - - 0.0000000000002498 76.0
BYD1_k127_10823247_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1011.0
BYD1_k127_10823247_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.178e-313 974.0
BYD1_k127_10823247_10 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000004775 231.0
BYD1_k127_10823247_11 Conserved TM helix - - - 0.000000000000000000000000000000000000000000000000000009831 207.0
BYD1_k127_10823247_12 MgtE intracellular N domain - - - 0.00000000000000000000000000000000000000001381 165.0
BYD1_k127_10823247_13 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000000008961 154.0
BYD1_k127_10823247_14 phosphohistidine phosphatase K08296 - - 0.00000000000000000000000000000001681 131.0
BYD1_k127_10823247_15 epimerase - - - 0.00000000000000000000000000000003068 138.0
BYD1_k127_10823247_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.926e-246 779.0
BYD1_k127_10823247_3 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 560.0
BYD1_k127_10823247_4 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 503.0
BYD1_k127_10823247_5 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 464.0
BYD1_k127_10823247_6 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 440.0
BYD1_k127_10823247_7 Nicotinamidase K08281 - 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 314.0
BYD1_k127_10823247_8 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
BYD1_k127_10823247_9 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000284 256.0
BYD1_k127_10823537_0 GMC oxidoreductase K00108 - 1.1.99.1 1.038e-218 725.0
BYD1_k127_10823537_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 551.0
BYD1_k127_10823537_2 helix_turn _helix lactose operon repressor K02529,K06145 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 297.0
BYD1_k127_10823537_3 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00003017 46.0
BYD1_k127_10825676_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1134.0
BYD1_k127_10825676_1 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1124.0
BYD1_k127_10825676_10 Thiosulfate-oxidizing multienzyme system protein SoxA K17222,K19713 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005507,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019538,GO:0020037,GO:0022900,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 292.0
BYD1_k127_10825676_11 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002564 271.0
BYD1_k127_10825676_12 cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000002752 236.0
BYD1_k127_10825676_13 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000003093 237.0
BYD1_k127_10825676_14 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000003152 199.0
BYD1_k127_10825676_15 - - - - 0.000000000000000000000000000000000000000000008311 164.0
BYD1_k127_10825676_16 Tfp pilus assembly protein, major pilin PilA K02650 - - 0.00000000000000000000000000000000000000000002053 168.0
BYD1_k127_10825676_17 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000006414 165.0
BYD1_k127_10825676_18 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000001165 134.0
BYD1_k127_10825676_19 DsrE/DsrF-like family - - - 0.000000000000000000000000005583 115.0
BYD1_k127_10825676_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 4.008e-257 826.0
BYD1_k127_10825676_20 oxidation protein K17227 - - 0.0000000000000000000000222 107.0
BYD1_k127_10825676_21 - - - - 0.00000000000000002698 82.0
BYD1_k127_10825676_3 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 6.31e-244 764.0
BYD1_k127_10825676_4 sulfate assimilation K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005861 547.0
BYD1_k127_10825676_5 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 486.0
BYD1_k127_10825676_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 419.0
BYD1_k127_10825676_7 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 405.0
BYD1_k127_10825676_8 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 377.0
BYD1_k127_10825676_9 abc transporter K02003,K05685 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 311.0
BYD1_k127_10858952_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 2.306e-279 867.0
BYD1_k127_10858952_1 Metallopeptidase family M24 - - - 3.304e-209 659.0
BYD1_k127_10858952_2 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009828 455.0
BYD1_k127_10858952_3 Belongs to the ABC transporter superfamily K05816 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015169,GO:0015399,GO:0015405,GO:0015430,GO:0015605,GO:0015711,GO:0015748,GO:0015794,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098656,GO:1901264,GO:1901505 3.6.3.20 0.0000007014 52.0
BYD1_k127_10869436_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 7.143e-238 746.0
BYD1_k127_10869436_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 1.097e-213 673.0
BYD1_k127_10869436_10 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000003721 212.0
BYD1_k127_10869436_11 PFAM Colicin V production protein K03558 - - 0.000000000000000000000000000000005893 138.0
BYD1_k127_10869436_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000005448 80.0
BYD1_k127_10869436_13 PFAM Sporulation domain protein K03749 - - 0.000000000000006162 81.0
BYD1_k127_10869436_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 550.0
BYD1_k127_10869436_3 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 561.0
BYD1_k127_10869436_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 477.0
BYD1_k127_10869436_5 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 475.0
BYD1_k127_10869436_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 447.0
BYD1_k127_10869436_7 LysM domain K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 422.0
BYD1_k127_10869436_8 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 355.0
BYD1_k127_10869436_9 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 329.0
BYD1_k127_10884692_0 Sulfatase - - - 1.272e-247 774.0
BYD1_k127_10884692_1 Sulfatase K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 522.0
BYD1_k127_10884692_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000002525 109.0
BYD1_k127_1099788_0 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 2.149e-238 744.0
BYD1_k127_1099788_1 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 3.472e-237 741.0
BYD1_k127_1099788_2 Protein of unknown function (DUF2891) - - - 0.000000000000000003572 85.0
BYD1_k127_11006359_0 Aldehyde dehydrogenase family K02618,K15514 - 1.2.1.77,1.2.1.91,3.3.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 578.0
BYD1_k127_11006359_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 352.0
BYD1_k127_11006359_2 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000002667 158.0
BYD1_k127_11006359_3 Histidine kinase K20974 - 2.7.13.3 0.0000000000000000000000000000000009045 132.0
BYD1_k127_11006359_4 - - - - 0.00000000000000000000005642 101.0
BYD1_k127_11006359_5 Histidine kinase A domain protein - - - 0.000000001173 62.0
BYD1_k127_11012264_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.144e-271 841.0
BYD1_k127_11012264_1 Heavy-metal-associated domain K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 587.0
BYD1_k127_11012264_10 Cytochrome oxidase maturation protein - - - 0.0000000001055 65.0
BYD1_k127_11012264_11 - - - - 0.00002242 48.0
BYD1_k127_11012264_12 Cbb3-type cytochrome oxidase component FixQ K00407 - - 0.000355 46.0
BYD1_k127_11012264_2 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 421.0
BYD1_k127_11012264_3 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 382.0
BYD1_k127_11012264_4 Belongs to the MenA family. Type 1 subfamily K02548 GO:0003674,GO:0003824,GO:0004659,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 374.0
BYD1_k127_11012264_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 360.0
BYD1_k127_11012264_6 Acyl-CoA synthetase (NDP forming) K09181 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 334.0
BYD1_k127_11012264_7 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003433 322.0
BYD1_k127_11012264_8 - - - - 0.00000000000000000000000000000000000000000003042 183.0
BYD1_k127_11012264_9 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000001383 149.0
BYD1_k127_11017934_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 437.0
BYD1_k127_11017934_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 404.0
BYD1_k127_11017934_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000000000001237 243.0
BYD1_k127_11017934_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000002314 194.0
BYD1_k127_1105348_0 Malic enzyme K00029 - 1.1.1.40 0.0 1041.0
BYD1_k127_1105348_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 6.16e-206 646.0
BYD1_k127_1105348_2 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 431.0
BYD1_k127_1105348_3 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 407.0
BYD1_k127_1105348_4 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006698 248.0
BYD1_k127_1105348_5 - - - - 0.0000000006649 70.0
BYD1_k127_1105348_6 Protein of unknown function (DUF2442) - - - 0.00000004356 65.0
BYD1_k127_1105348_7 Histone H1-like nucleoprotein HC2 K11275 - - 0.0000004443 56.0
BYD1_k127_11058216_0 COG0474 Cation transport ATPase K01537 - 3.6.3.8 0.0 1111.0
BYD1_k127_11058216_1 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 3.66e-241 779.0
BYD1_k127_11058216_10 Acyl-CoA synthetase (NDP forming) K09181 - - 0.00000000000000000000000000000000001206 142.0
BYD1_k127_11058216_11 Adenylylsulphate kinase K00860 - 2.7.1.25 0.000000000000000000000000009232 126.0
BYD1_k127_11058216_12 - - - - 0.00000000000000000000000009797 110.0
BYD1_k127_11058216_13 Belongs to the universal stress protein A family - - - 0.000001331 59.0
BYD1_k127_11058216_2 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 1.207e-213 685.0
BYD1_k127_11058216_3 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 397.0
BYD1_k127_11058216_4 (ABC) transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 367.0
BYD1_k127_11058216_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 366.0
BYD1_k127_11058216_6 Divalent cation transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009852 311.0
BYD1_k127_11058216_7 Formate nitrite K02598,K06212 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001199 251.0
BYD1_k127_11058216_8 ORF6N domain - - - 0.00000000000000000000000000000000000000000000001374 175.0
BYD1_k127_11058216_9 Helix-hairpin-helix domain K04477 - - 0.000000000000000000000000000000000000337 144.0
BYD1_k127_1106427_0 4-hydroxybenzoate K00481 GO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016709,GO:0018659,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.14.13.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 537.0
BYD1_k127_1106427_1 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 318.0
BYD1_k127_1106427_2 COG1943 Transposase and inactivated derivatives K07491 - - 0.000000000000000000000000000000000000000000000000000000000000002243 235.0
BYD1_k127_1106427_3 endoribonuclease L-PSP - - - 0.00000000004635 69.0
BYD1_k127_11064274_0 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 567.0
BYD1_k127_11064274_1 protein conserved in bacteria K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 500.0
BYD1_k127_11064274_2 Serine aminopeptidase, S33 - GO:0003674,GO:0003824,GO:0004301,GO:0005488,GO:0005515,GO:0016787,GO:0016801,GO:0016803,GO:0018742,GO:0042802,GO:0042803,GO:0046983 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005894 425.0
BYD1_k127_11064274_3 surface antigen K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 377.0
BYD1_k127_11064274_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 358.0
BYD1_k127_11064274_5 Lytic murein transglycosylase K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002759 308.0
BYD1_k127_11064274_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000002479 258.0
BYD1_k127_11064274_7 peptidase K06194 - - 0.000000000000000000000000000000000000000000000000000000000003504 228.0
BYD1_k127_11064274_8 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000906 93.0
BYD1_k127_11086352_0 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 383.0
BYD1_k127_11086352_1 PFAM Extradiol ring-cleavage dioxygenase, class III K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 361.0
BYD1_k127_11086352_2 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 304.0
BYD1_k127_11086352_3 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.000000000000000000000000000135 128.0
BYD1_k127_11086352_4 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 0.000000000000000000000000006308 119.0
BYD1_k127_11086352_5 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000002877 98.0
BYD1_k127_11086352_6 YCII-related domain - - - 0.00000000001409 65.0
BYD1_k127_11086352_7 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000001572 67.0
BYD1_k127_11253371_0 TRAP transporter, 4TM 12TM fusion protein - - - 4.786e-227 721.0
BYD1_k127_11253371_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 514.0
BYD1_k127_11253371_10 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000001991 203.0
BYD1_k127_11253371_11 acetyltransferase K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000000000000186 195.0
BYD1_k127_11253371_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000008162 180.0
BYD1_k127_11253371_13 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000003384 179.0
BYD1_k127_11253371_14 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000004742 168.0
BYD1_k127_11253371_15 alpha beta - - - 0.0000000000000000000000000000000000003623 151.0
BYD1_k127_11253371_16 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000006386 149.0
BYD1_k127_11253371_17 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000001342 114.0
BYD1_k127_11253371_2 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 491.0
BYD1_k127_11253371_3 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007843 478.0
BYD1_k127_11253371_4 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 295.0
BYD1_k127_11253371_5 TRAP transporter solute receptor TAXI family protein K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003829 269.0
BYD1_k127_11253371_6 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002988 269.0
BYD1_k127_11253371_7 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000005867 246.0
BYD1_k127_11253371_8 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000001093 244.0
BYD1_k127_11253371_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000211 220.0
BYD1_k127_11267083_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 575.0
BYD1_k127_11267083_1 response regulator K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000118 284.0
BYD1_k127_11267083_2 Histidine kinase K02484,K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002532 285.0
BYD1_k127_11267083_3 OmpA-like transmembrane domain - - - 0.00000000000000000000004276 106.0
BYD1_k127_11267083_4 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00004395 54.0
BYD1_k127_11292052_0 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 333.0
BYD1_k127_11292052_1 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000005533 237.0
BYD1_k127_11292052_2 Cupin 2, conserved barrel - - - 0.0000000000000000000000000000000000000000006929 167.0
BYD1_k127_11292052_3 Thioesterase - - - 0.000000000000000000000000000000001244 134.0
BYD1_k127_11292052_4 P-type ATPase K17686 - 3.6.3.54 0.000000000000001242 76.0
BYD1_k127_11292052_5 Heavy-metal-associated domain - - - 0.00000001359 60.0
BYD1_k127_11392249_0 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 374.0
BYD1_k127_11392249_1 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000002495 105.0
BYD1_k127_11392249_2 Protein of unknown function (DUF3293) - - - 0.0000001711 58.0
BYD1_k127_11397048_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 2.473e-315 981.0
BYD1_k127_11397048_1 DNA recombination protein, rmuC K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 432.0
BYD1_k127_11397048_2 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 3.1.3.12 0.000000000000000000000000000000000000000000000000000000005204 207.0
BYD1_k127_11397048_3 Psort location Cytoplasmic, score K00845,K00847 GO:0003674,GO:0003824,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019318,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.2,2.7.1.4 0.0000000000000000168 86.0
BYD1_k127_1141858_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1481.0
BYD1_k127_1141858_1 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 5.159e-237 747.0
BYD1_k127_1141858_10 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 342.0
BYD1_k127_1141858_11 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 312.0
BYD1_k127_1141858_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000323 322.0
BYD1_k127_1141858_13 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000577 274.0
BYD1_k127_1141858_14 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001572 268.0
BYD1_k127_1141858_15 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003614 281.0
BYD1_k127_1141858_16 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000008619 258.0
BYD1_k127_1141858_17 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002849 230.0
BYD1_k127_1141858_18 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000007131 227.0
BYD1_k127_1141858_19 Sulfatase-modifying factor enzyme 1 K11912 - 2.7.11.1 0.000000000000000000000000000000000000000000000000003793 192.0
BYD1_k127_1141858_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 8.806e-206 645.0
BYD1_k127_1141858_20 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000007467 182.0
BYD1_k127_1141858_21 COG0784 FOG CheY-like receiver - - - 0.0000000000000000000000000004576 117.0
BYD1_k127_1141858_22 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000003604 108.0
BYD1_k127_1141858_24 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000002604 76.0
BYD1_k127_1141858_3 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0000183,GO:0001302,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016874,GO:0016879,GO:0018130,GO:0019219,GO:0019222,GO:0019357,GO:0019358,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032502,GO:0034641,GO:0034654,GO:0040029,GO:0043094,GO:0043173,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046497,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0051276,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 586.0
BYD1_k127_1141858_4 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 556.0
BYD1_k127_1141858_5 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 477.0
BYD1_k127_1141858_6 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006049 381.0
BYD1_k127_1141858_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 349.0
BYD1_k127_1141858_8 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 362.0
BYD1_k127_1141858_9 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 343.0
BYD1_k127_11447515_0 D-galactarate dehydratase / Altronate hydrolase, C terminus K16846 - 4.4.1.24 5.61e-206 645.0
BYD1_k127_11447515_1 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006698 394.0
BYD1_k127_11447515_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00245 - 1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008079 359.0
BYD1_k127_11447515_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 353.0
BYD1_k127_11447515_4 SAF K16845 - 4.4.1.24 0.00000000000000000000000000000000000007938 150.0
BYD1_k127_11447515_5 succinate dehydrogenase K00246 - - 0.00000000000000000000000000000000004595 139.0
BYD1_k127_11447515_6 succinate dehydrogenase K00247 - - 0.0000000000000000000000000000004057 130.0
BYD1_k127_11447515_7 Tartrate K01677 - 4.2.1.2 0.00000000000000000000000629 109.0
BYD1_k127_11532347_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481 - - 3.475e-200 632.0
BYD1_k127_11532347_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 619.0
BYD1_k127_11532347_2 Sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 426.0
BYD1_k127_11532347_3 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 381.0
BYD1_k127_11534578_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 6.972e-199 634.0
BYD1_k127_11534578_1 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 518.0
BYD1_k127_11534578_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K07812 - 1.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008104 417.0
BYD1_k127_11534578_3 NADP transhydrogenase subunit alpha K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 319.0
BYD1_k127_11534578_4 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 295.0
BYD1_k127_11534578_5 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000001425 227.0
BYD1_k127_11534578_6 NAD(P) transhydrogenase, alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000001745 168.0
BYD1_k127_11534578_7 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000000000001999 151.0
BYD1_k127_11538215_0 PFAM Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 1.435e-257 805.0
BYD1_k127_11538215_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000001659 268.0
BYD1_k127_11538215_2 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000009917 246.0
BYD1_k127_11538215_3 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000001437 105.0
BYD1_k127_11538215_4 - - - - 0.000000000001299 70.0
BYD1_k127_11546900_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 531.0
BYD1_k127_11546900_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 329.0
BYD1_k127_11546900_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000006294 270.0
BYD1_k127_11546900_3 PFAM ABC transporter related K02049 - - 0.0000000000000000000000000000000000000000000000000000000000001202 218.0
BYD1_k127_11546900_4 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000001934 220.0
BYD1_k127_11546900_5 ABC transporter K15553 - - 0.000000000004406 79.0
BYD1_k127_11556065_0 Amidohydrolase family - - - 1.456e-256 800.0
BYD1_k127_11556065_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 4.933e-213 665.0
BYD1_k127_11556065_2 Phosphoenolpyruvate phosphomutase K20454 - 4.1.3.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 376.0
BYD1_k127_11556065_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 351.0
BYD1_k127_11556065_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 314.0
BYD1_k127_11715445_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007621 524.0
BYD1_k127_11715445_1 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 417.0
BYD1_k127_11715445_2 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007072 403.0
BYD1_k127_11715445_3 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 380.0
BYD1_k127_11715445_4 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004815 283.0
BYD1_k127_11715445_5 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003014 270.0
BYD1_k127_11746196_0 Bacterial extracellular solute-binding protein K02027 - - 1.926e-210 681.0
BYD1_k127_11746196_1 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 3.519e-196 632.0
BYD1_k127_11746196_10 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 406.0
BYD1_k127_11746196_11 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 382.0
BYD1_k127_11746196_12 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 371.0
BYD1_k127_11746196_13 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 368.0
BYD1_k127_11746196_14 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 364.0
BYD1_k127_11746196_15 LrgB-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 312.0
BYD1_k127_11746196_16 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004086 286.0
BYD1_k127_11746196_17 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003345 259.0
BYD1_k127_11746196_18 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001203 257.0
BYD1_k127_11746196_19 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005461 254.0
BYD1_k127_11746196_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 601.0
BYD1_k127_11746196_20 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001103 246.0
BYD1_k127_11746196_21 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003934 243.0
BYD1_k127_11746196_22 Protein of unknown function DUF126 K09128 - - 0.00000000000000000000000000000000000000000000000000001875 213.0
BYD1_k127_11746196_23 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000102 199.0
BYD1_k127_11746196_24 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000002094 177.0
BYD1_k127_11746196_25 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000000000000000000000007062 174.0
BYD1_k127_11746196_26 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000001112 181.0
BYD1_k127_11746196_27 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.00000000000000000000000000000000000000000004391 167.0
BYD1_k127_11746196_28 GntR family transcriptional regulator K03486,K03710 - - 0.000000000000000000000000000000000000000002155 165.0
BYD1_k127_11746196_29 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000009195 154.0
BYD1_k127_11746196_3 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 599.0
BYD1_k127_11746196_30 LrgA family - - - 0.0000000000000000000000000000435 120.0
BYD1_k127_11746196_31 COGs COG4446 conserved - - - 0.0000000000000000000000000005238 119.0
BYD1_k127_11746196_32 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000378 117.0
BYD1_k127_11746196_33 small protein containing a coiled-coil domain - - - 0.0000000000000003401 80.0
BYD1_k127_11746196_34 Methyl-accepting chemotaxis protein K03406 - - 0.0000000006833 72.0
BYD1_k127_11746196_4 TRAP transporter, 4TM 12TM fusion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 569.0
BYD1_k127_11746196_5 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 506.0
BYD1_k127_11746196_6 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 483.0
BYD1_k127_11746196_7 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 443.0
BYD1_k127_11746196_8 Binding-protein-dependent transport system inner membrane component K02026,K17323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 406.0
BYD1_k127_11746196_9 TOBE domain K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 418.0
BYD1_k127_11753410_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 7.817e-248 776.0
BYD1_k127_11753410_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 1.059e-240 757.0
BYD1_k127_11753410_10 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 421.0
BYD1_k127_11753410_11 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 397.0
BYD1_k127_11753410_12 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 387.0
BYD1_k127_11753410_13 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009817 326.0
BYD1_k127_11753410_14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002273 267.0
BYD1_k127_11753410_15 Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002145 269.0
BYD1_k127_11753410_16 Nitrile hydratase K01721,K20807 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000009923 260.0
BYD1_k127_11753410_17 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000000000000000168 216.0
BYD1_k127_11753410_18 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000000000000000003442 192.0
BYD1_k127_11753410_19 DsbA oxidoreductase - - - 0.00000000000000000000000000000000000000000000928 168.0
BYD1_k127_11753410_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 3.645e-195 631.0
BYD1_k127_11753410_20 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000000000000000001026 146.0
BYD1_k127_11753410_21 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000003121 101.0
BYD1_k127_11753410_22 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000001213 81.0
BYD1_k127_11753410_23 pilus assembly protein major pilin PilA K02650,K02655 - - 0.0000000000008573 77.0
BYD1_k127_11753410_26 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000008741 49.0
BYD1_k127_11753410_27 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0007284 46.0
BYD1_k127_11753410_3 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 557.0
BYD1_k127_11753410_4 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 536.0
BYD1_k127_11753410_5 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 494.0
BYD1_k127_11753410_6 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 515.0
BYD1_k127_11753410_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 470.0
BYD1_k127_11753410_8 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 449.0
BYD1_k127_11753410_9 Beta-lactamase domain protein K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 430.0
BYD1_k127_11758083_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 - 1.2.7.8 0.0 1592.0
BYD1_k127_11758083_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 7.82e-211 657.0
BYD1_k127_11758083_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000143 183.0
BYD1_k127_11758083_11 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000008929 167.0
BYD1_k127_11758083_12 pilus organization K07346 - - 0.000000000000000000000000000000000000000006059 163.0
BYD1_k127_11758083_13 Spore Coat Protein U domain - - - 0.0000000000000000008773 94.0
BYD1_k127_11758083_15 Cysteine-rich secretory protein family - - - 0.00003581 56.0
BYD1_k127_11758083_2 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 436.0
BYD1_k127_11758083_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 372.0
BYD1_k127_11758083_4 Outer membrane usher protein K07347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 352.0
BYD1_k127_11758083_5 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 313.0
BYD1_k127_11758083_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000153 266.0
BYD1_k127_11758083_7 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000006946 232.0
BYD1_k127_11758083_8 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000525 216.0
BYD1_k127_11758083_9 Domain of unknown function DUF108 K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000000000007267 213.0
BYD1_k127_11776815_0 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 480.0
BYD1_k127_11776815_1 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000046 271.0
BYD1_k127_11776815_2 Binding-protein-dependent transport system inner membrane component - - - 0.0002839 44.0
BYD1_k127_11809138_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 445.0
BYD1_k127_11809138_1 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000116 286.0
BYD1_k127_11809138_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000007543 241.0
BYD1_k127_11809138_3 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000006531 218.0
BYD1_k127_11898586_0 PFAM AMP-dependent synthetase and ligase K00666 - - 8.108e-302 954.0
BYD1_k127_11898586_1 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 7.063e-265 830.0
BYD1_k127_11898586_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009352 582.0
BYD1_k127_11898586_3 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 584.0
BYD1_k127_11898586_4 formate dehydrogenase, alpha subunit K00123,K22015 - 1.17.1.9,1.17.99.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000729 562.0
BYD1_k127_11898586_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 494.0
BYD1_k127_11898586_6 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 477.0
BYD1_k127_11898586_7 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005326 260.0
BYD1_k127_11898586_8 Protein of unknown function (DUF2889) - - - 0.000000000000000000000000000000000000000000000000000000639 196.0
BYD1_k127_11898586_9 DoxX family K15977 - - 0.00000000000000000000000000000000000000006054 155.0
BYD1_k127_12013017_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1212.0
BYD1_k127_12013017_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002937 597.0
BYD1_k127_12013017_10 Protein of unknown function (DUF3619) - - - 0.000000000000000002521 91.0
BYD1_k127_12013017_2 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 558.0
BYD1_k127_12013017_3 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 398.0
BYD1_k127_12013017_4 Permease, YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 377.0
BYD1_k127_12013017_5 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 378.0
BYD1_k127_12013017_6 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001232 243.0
BYD1_k127_12013017_7 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.00000000000000000000000000000000005749 153.0
BYD1_k127_12013017_8 RDD family - - - 0.0000000000000000000000000001618 120.0
BYD1_k127_12013017_9 Protein of unknown function (DUF3106) - - - 0.000000000000000000007263 102.0
BYD1_k127_12013353_0 AMP-binding enzyme K01895 - 6.2.1.1 4.581e-205 646.0
BYD1_k127_12013353_1 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003219 570.0
BYD1_k127_12013353_10 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002881 273.0
BYD1_k127_12013353_11 plastoquinol--plastocyanin reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005413 243.0
BYD1_k127_12013353_12 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase K01560 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000005569 203.0
BYD1_k127_12013353_13 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000005863 164.0
BYD1_k127_12013353_14 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000001185 140.0
BYD1_k127_12013353_15 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000008032 120.0
BYD1_k127_12013353_16 Cytochrome c - - - 0.0000000000000000000000000001096 118.0
BYD1_k127_12013353_17 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000008318 94.0
BYD1_k127_12013353_18 Uncharacterized ACR, COG1678 K07735 - - 0.0000004637 59.0
BYD1_k127_12013353_2 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 503.0
BYD1_k127_12013353_3 AAA domain (Cdc48 subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 484.0
BYD1_k127_12013353_4 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 400.0
BYD1_k127_12013353_5 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 357.0
BYD1_k127_12013353_6 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 323.0
BYD1_k127_12013353_7 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 300.0
BYD1_k127_12013353_8 Nudix N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003354 273.0
BYD1_k127_12013353_9 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001874 275.0
BYD1_k127_12034724_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1446.0
BYD1_k127_12034724_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1170.0
BYD1_k127_12034724_10 Bacterial periplasmic substrate-binding proteins K02030,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 379.0
BYD1_k127_12034724_11 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 391.0
BYD1_k127_12034724_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 365.0
BYD1_k127_12034724_13 ABC transporter permease K02029,K10003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 329.0
BYD1_k127_12034724_14 depolymerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 329.0
BYD1_k127_12034724_15 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 304.0
BYD1_k127_12034724_16 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008255 282.0
BYD1_k127_12034724_17 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001885 275.0
BYD1_k127_12034724_18 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001918 289.0
BYD1_k127_12034724_19 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001769 274.0
BYD1_k127_12034724_2 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 1.77e-300 949.0
BYD1_k127_12034724_20 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001858 255.0
BYD1_k127_12034724_21 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000001764 224.0
BYD1_k127_12034724_22 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000009793 213.0
BYD1_k127_12034724_23 2-phosphosulfolactate phosphatase activity K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000002645 211.0
BYD1_k127_12034724_24 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000003766 205.0
BYD1_k127_12034724_25 cyclic nucleotide binding K01420 - - 0.0000000000000000000000000000000000000000000000000000001155 207.0
BYD1_k127_12034724_26 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000001217 200.0
BYD1_k127_12034724_27 TIGRFAM amine acid ABC transporter, permease protein, 3-TM region, His Glu Gln Arg opine family K10002 - - 0.0000000000000000000000000000000000000000000000000000002565 196.0
BYD1_k127_12034724_28 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000003701 204.0
BYD1_k127_12034724_29 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000000000000000000007091 208.0
BYD1_k127_12034724_3 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.468e-279 868.0
BYD1_k127_12034724_30 NUDIX domain K08310 - 3.6.1.67 0.00000000000000000000000000000000000000000000000001483 185.0
BYD1_k127_12034724_31 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000396 157.0
BYD1_k127_12034724_32 Protein of unknown function (DUF2946) - - - 0.000000000000000000000000000000000005604 142.0
BYD1_k127_12034724_33 Guanyl-specific ribonuclease Sa - - - 0.00000000000000000000000000000007137 132.0
BYD1_k127_12034724_34 Putative regulatory protein - - - 0.00000000000000000000000002694 110.0
BYD1_k127_12034724_35 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000003034 87.0
BYD1_k127_12034724_36 Barstar (barnase inhibitor) - - - 0.0000000001673 71.0
BYD1_k127_12034724_4 Acetoacetyl-CoA synthase K01907 - 6.2.1.16 3.03e-247 779.0
BYD1_k127_12034724_5 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.599e-222 702.0
BYD1_k127_12034724_6 Aspartate ammonia-lyase K01744 - 4.3.1.1 1.505e-216 680.0
BYD1_k127_12034724_7 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 424.0
BYD1_k127_12034724_8 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 403.0
BYD1_k127_12034724_9 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 378.0
BYD1_k127_12076462_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.597e-216 679.0
BYD1_k127_12076462_1 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 503.0
BYD1_k127_12076462_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 288.0
BYD1_k127_12076462_3 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000001425 198.0
BYD1_k127_12076462_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000000001509 166.0
BYD1_k127_12076462_5 Uncharacterized ACR, COG1993 - - - 0.00000000000000000000000000000000004778 136.0
BYD1_k127_12082_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 8.921e-210 665.0
BYD1_k127_12082_1 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 399.0
BYD1_k127_12082_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 289.0
BYD1_k127_12082_3 Domain of unknown function (DUF4124) - - - 0.0000000000000000002748 89.0
BYD1_k127_12100277_0 PFAM Aldehyde dehydrogenase K00128 - 1.2.1.3 5.932e-195 616.0
BYD1_k127_12100277_1 Carbamoyl-phosphate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 570.0
BYD1_k127_12100277_2 Bacterial transcriptional repressor C-terminal K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001042 272.0
BYD1_k127_12100277_3 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000001813 217.0
BYD1_k127_12100277_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000003167 215.0
BYD1_k127_12100277_5 Bacterial-like globin - - - 0.0000000000000000000000000000000000000000000273 164.0
BYD1_k127_1253012_0 FtsX-like permease family K02004 - - 0.0 1081.0
BYD1_k127_1253012_1 COG2217 Cation transport ATPase K17686 - 3.6.3.54 8.131e-289 910.0
BYD1_k127_1253012_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 464.0
BYD1_k127_1253012_3 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009889 368.0
BYD1_k127_1253012_4 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 346.0
BYD1_k127_1253012_5 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 323.0
BYD1_k127_1253012_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000008534 201.0
BYD1_k127_1253012_7 PFAM Uncharacterised BCR, COG1937 K21600 - - 0.0000000000000000000000000000009095 127.0
BYD1_k127_1253012_8 Heavy metal transport detoxification protein K07213 - - 0.0000000000004087 83.0
BYD1_k127_1253012_9 - - - - 0.0000000001983 65.0
BYD1_k127_1254010_0 P-type ATPase' K01533 - 3.6.3.4 0.0 1035.0
BYD1_k127_1254010_1 TIGRFAM Glyceraldehyde-3-phosphate dehydrogenase, type II K00150 - 1.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 527.0
BYD1_k127_1254010_10 - - - - 0.0000003243 53.0
BYD1_k127_1254010_11 Protein of unknown function (DUF1622) - - - 0.00003421 49.0
BYD1_k127_1254010_12 PFAM glycosyl transferase family 35 K00688 - 2.4.1.1 0.0008282 42.0
BYD1_k127_1254010_2 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 376.0
BYD1_k127_1254010_3 glycoside hydrolase, family 65 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 390.0
BYD1_k127_1254010_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000004494 236.0
BYD1_k127_1254010_5 BON domain - - - 0.0000000000000000000000000000000000000000000000000008068 196.0
BYD1_k127_1254010_6 Major Facilitator Superfamily K08151 - - 0.00000000000000000000000000000000001826 152.0
BYD1_k127_1254010_7 - - - - 0.000000000000000000000002069 107.0
BYD1_k127_1254010_8 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.00000000000000000003912 96.0
BYD1_k127_1254010_9 Protein of unknown function (DUF1090) - - - 0.000000000000002933 83.0
BYD1_k127_1256238_0 Belongs to the IlvD Edd family - - - 5.051e-272 846.0
BYD1_k127_1256238_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 484.0
BYD1_k127_1256238_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 353.0
BYD1_k127_1256238_3 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000002433 187.0
BYD1_k127_1263709_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 522.0
BYD1_k127_1263709_1 Iron-containing alcohol dehydrogenase K13954,K19954 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009894 361.0
BYD1_k127_1263709_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 295.0
BYD1_k127_1263709_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001045 256.0
BYD1_k127_1267629_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1474.0
BYD1_k127_1267629_1 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005358 546.0
BYD1_k127_1267629_10 - - - - 0.0000568 48.0
BYD1_k127_1267629_2 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 423.0
BYD1_k127_1267629_3 4Fe-4S dicluster domain K00124,K07307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 401.0
BYD1_k127_1267629_4 formate dehydrogenase K00127 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 348.0
BYD1_k127_1267629_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.00000000000000000000000000000000000000000000000002359 186.0
BYD1_k127_1267629_6 Nitrate reductase delta subunit - - - 0.000000000000000000000000000000000000001185 160.0
BYD1_k127_1267629_7 Domain of unknown function (DUF1330) - - - 0.0000000000000000000001314 112.0
BYD1_k127_1267629_8 PFAM Dinitrogenase reductase ADP-ribosyltransferase K05951 - 2.4.2.37 0.000000000000000004119 87.0
BYD1_k127_1267629_9 - - - - 0.00000002589 64.0
BYD1_k127_1302229_0 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 442.0
BYD1_k127_1302229_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 331.0
BYD1_k127_1302229_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009161 228.0
BYD1_k127_1308097_0 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 6.115e-243 769.0
BYD1_k127_1308097_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 1.174e-234 735.0
BYD1_k127_1308097_10 PFAM CopG domain protein DNA-binding domain protein - - - 0.00000000000000004007 88.0
BYD1_k127_1308097_2 NADH ubiquinone plastoquinone (Complex I) - - - 1.21e-234 744.0
BYD1_k127_1308097_3 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 435.0
BYD1_k127_1308097_4 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 365.0
BYD1_k127_1308097_5 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 306.0
BYD1_k127_1308097_6 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002409 271.0
BYD1_k127_1308097_7 Rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000000000000000000003676 193.0
BYD1_k127_1308097_8 thioesterase - - - 0.000000000000000000000000000000004193 141.0
BYD1_k127_1308097_9 - - - - 0.000000000000000000000000000002176 131.0
BYD1_k127_1335956_0 Bacterial extracellular solute-binding protein K02027,K10236 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 394.0
BYD1_k127_1335956_1 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 319.0
BYD1_k127_1335956_2 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 327.0
BYD1_k127_1335956_3 Binding-protein-dependent transport system inner membrane component K02026,K10238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003518 296.0
BYD1_k127_1335956_4 Binding-protein-dependent transport system inner membrane component K02025,K10237,K15771 GO:0008150,GO:0040007,GO:0044110,GO:0044116,GO:0044117,GO:0044403,GO:0044419,GO:0051704 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004364 282.0
BYD1_k127_1335956_5 Thioredoxin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007031 265.0
BYD1_k127_1335956_6 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000000005302 159.0
BYD1_k127_1335956_7 - - - - 0.0000000000000000000000000000000000000001103 156.0
BYD1_k127_1366753_0 Tripartite tricarboxylate transporter TctA family K07793 - - 1.535e-223 711.0
BYD1_k127_1366753_1 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 445.0
BYD1_k127_1366753_11 PEP-CTERM motif - - - 0.0007487 49.0
BYD1_k127_1366753_2 Amino acid polyamine organocation transporter, APC superfamily K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 411.0
BYD1_k127_1366753_3 AIR synthase related protein, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005297 254.0
BYD1_k127_1366753_4 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000003606 199.0
BYD1_k127_1366753_5 AMP-binding enzyme K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000002874 186.0
BYD1_k127_1366753_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000004588 197.0
BYD1_k127_1366753_8 LysR family K04761 - - 0.00000000000000000000000000001688 121.0
BYD1_k127_1366753_9 Staphylococcal nuclease homologue - - - 0.0000000000007879 72.0
BYD1_k127_1443551_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 344.0
BYD1_k127_1443551_1 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009155 252.0
BYD1_k127_1443551_10 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000005864 154.0
BYD1_k127_1443551_12 DsrC like protein - - - 0.00000000000000000000000000000000004863 145.0
BYD1_k127_1443551_13 Sulfurtransferase TusA K04085 - - 0.000000000000000000000000000000001299 130.0
BYD1_k127_1443551_14 - - - - 0.000000000000000000000000000001411 124.0
BYD1_k127_1443551_15 - - - - 0.00000000000000000007956 90.0
BYD1_k127_1443551_16 Peptidase S24-like - - - 0.00000000000000000009681 92.0
BYD1_k127_1443551_17 - - - - 0.0000000000000000009512 95.0
BYD1_k127_1443551_18 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.000000000000000001437 89.0
BYD1_k127_1443551_19 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000003674 77.0
BYD1_k127_1443551_2 PKHD-type hydroxylase K07336 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000167 253.0
BYD1_k127_1443551_3 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004218 251.0
BYD1_k127_1443551_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000007332 233.0
BYD1_k127_1443551_5 - - - - 0.000000000000000000000000000000000000000000000000000000000002531 212.0
BYD1_k127_1443551_6 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000005645 205.0
BYD1_k127_1443551_7 Sulfurtransferase TusA - - - 0.000000000000000000000000000000000000000000000000000006793 194.0
BYD1_k127_1443551_8 TIGRFAM CRISPR-associated protein - - - 0.00000000000000000000000000000000000000000000000006299 193.0
BYD1_k127_1443551_9 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000001833 171.0
BYD1_k127_1481186_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.122e-227 718.0
BYD1_k127_1481186_1 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 2.203e-217 691.0
BYD1_k127_1481186_2 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 582.0
BYD1_k127_1481186_3 cytochrome d1, heme region K19345 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 512.0
BYD1_k127_1481186_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 497.0
BYD1_k127_1481186_5 2 iron, 2 sulfur cluster binding K00266,K00528,K02823 - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 453.0
BYD1_k127_1481186_6 COG1522 Transcriptional regulators - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008284 302.0
BYD1_k127_1481186_7 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001826 280.0
BYD1_k127_1481186_8 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.0000000000000000000000000000004061 125.0
BYD1_k127_1481443_0 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000225 300.0
BYD1_k127_1481443_1 cytochrome c biogenesis protein K06196 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002226 254.0
BYD1_k127_1481443_2 periplasmic protein thiol disulfide K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000003733 226.0
BYD1_k127_1481443_3 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000000000000001245 199.0
BYD1_k127_1481443_4 Protein of unknown function, DUF - - - 0.0000000000000000000000000000000000000001875 154.0
BYD1_k127_1481443_5 - - - - 0.00000000000000000000000000000000000000339 151.0
BYD1_k127_1481443_6 - - - - 0.00000000000000000000001151 111.0
BYD1_k127_1481443_7 LTXXQ motif family protein - - - 0.00000000000000000000005296 105.0
BYD1_k127_1481443_8 - - - - 0.000000000000000000005169 93.0
BYD1_k127_1481443_9 - - - - 0.000000004202 59.0
BYD1_k127_1493825_0 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 621.0
BYD1_k127_1493825_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 613.0
BYD1_k127_1493825_10 PFAM small multidrug resistance protein K11741 - - 0.0000000000000000000000000000000037 141.0
BYD1_k127_1493825_11 Belongs to the GST superfamily K11209 - - 0.0000000000000000000004162 96.0
BYD1_k127_1493825_12 alginic acid biosynthetic process K12287 - - 0.0000000000001631 79.0
BYD1_k127_1493825_2 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 409.0
BYD1_k127_1493825_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 363.0
BYD1_k127_1493825_4 membrane-bound metal-dependent K07038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 327.0
BYD1_k127_1493825_5 Protein of unknown function (DUF3750) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 291.0
BYD1_k127_1493825_6 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 289.0
BYD1_k127_1493825_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001146 227.0
BYD1_k127_1493825_8 RES domain - - - 0.0000000000000000000000000000000000000000003354 166.0
BYD1_k127_1493825_9 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000003319 132.0
BYD1_k127_1497609_0 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 588.0
BYD1_k127_1497609_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 497.0
BYD1_k127_1497609_2 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003619 469.0
BYD1_k127_1497609_3 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 456.0
BYD1_k127_1497609_4 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 406.0
BYD1_k127_1497609_5 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005841 376.0
BYD1_k127_1497609_6 Nucleotidyl transferase K15669 - 2.7.7.71 0.0000000000000000000000000000000000000000000000000000000000000003151 230.0
BYD1_k127_1497609_7 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000001189 228.0
BYD1_k127_1517147_0 ribosomal rna small subunit methyltransferase - - - 3.918e-203 642.0
BYD1_k127_1517147_1 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 601.0
BYD1_k127_1517147_10 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000003527 173.0
BYD1_k127_1517147_11 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000005954 159.0
BYD1_k127_1517147_12 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000001842 154.0
BYD1_k127_1517147_13 PFAM AMP-dependent synthetase and ligase K01911,K12508 - 6.2.1.26,6.2.1.34 0.00003453 46.0
BYD1_k127_1517147_2 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 557.0
BYD1_k127_1517147_3 C4-dicarboxylate ABC transporter permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 532.0
BYD1_k127_1517147_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 510.0
BYD1_k127_1517147_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 464.0
BYD1_k127_1517147_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 459.0
BYD1_k127_1517147_7 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 467.0
BYD1_k127_1517147_8 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 317.0
BYD1_k127_1517147_9 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001758 256.0
BYD1_k127_1520851_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.84e-260 816.0
BYD1_k127_1520851_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 336.0
BYD1_k127_1520851_2 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000291 198.0
BYD1_k127_1520851_3 protein conserved in bacteria K09790 - - 0.0000000000000000000000000000000001874 136.0
BYD1_k127_1541175_0 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 9.385e-201 634.0
BYD1_k127_1541175_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 456.0
BYD1_k127_1541175_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 334.0
BYD1_k127_1541175_3 PFAM histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001268 271.0
BYD1_k127_1541175_4 response regulator K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002947 266.0
BYD1_k127_1561909_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005752 550.0
BYD1_k127_1561909_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 402.0
BYD1_k127_1561909_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 343.0
BYD1_k127_1561909_3 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000008628 260.0
BYD1_k127_1561909_4 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000008325 195.0
BYD1_k127_1561909_5 OmpA family K03286 - - 0.0000000000000000000000000000000003844 141.0
BYD1_k127_1561909_6 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000004561 58.0
BYD1_k127_1566289_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.121e-279 878.0
BYD1_k127_1566289_1 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 3.068e-228 713.0
BYD1_k127_1566289_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 564.0
BYD1_k127_1566289_3 PFAM extracellular solute-binding protein family 1 K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 556.0
BYD1_k127_1566289_4 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 447.0
BYD1_k127_1566289_5 PFAM binding-protein-dependent transport systems inner membrane component K05814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 415.0
BYD1_k127_1566289_6 probably responsible for the translocation of the substrate across the membrane K05815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 405.0
BYD1_k127_1566289_7 Glycine cleavage T-protein C-terminal barrel domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 389.0
BYD1_k127_1566289_8 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 302.0
BYD1_k127_1566289_9 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002488 265.0
BYD1_k127_1572994_0 chain 5 L K00341 - 1.6.5.3 2.34e-243 762.0
BYD1_k127_1572994_1 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 8.84e-231 722.0
BYD1_k127_1572994_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 524.0
BYD1_k127_1572994_3 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000103 113.0
BYD1_k127_157783_0 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003683 284.0
BYD1_k127_157783_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009058 257.0
BYD1_k127_157783_2 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000008332 119.0
BYD1_k127_157783_3 serine threonine protein kinase K12132 - 2.7.11.1 0.00001036 48.0
BYD1_k127_1586984_0 AMP-binding enzyme K12508 - 6.2.1.34 7.515e-223 704.0
BYD1_k127_1586984_1 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 316.0
BYD1_k127_1586984_10 PFAM Appr-1-p processing domain protein - - - 0.0000000000000000000000000000000001834 140.0
BYD1_k127_1586984_11 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000004468 106.0
BYD1_k127_1586984_12 - - - - 0.0000000000000001721 81.0
BYD1_k127_1586984_13 2-Nitropropane dioxygenase - - - 0.00000000000034 73.0
BYD1_k127_1586984_2 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000007935 271.0
BYD1_k127_1586984_3 cysteine dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001865 259.0
BYD1_k127_1586984_4 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000028 266.0
BYD1_k127_1586984_5 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000006744 231.0
BYD1_k127_1586984_6 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000001033 237.0
BYD1_k127_1586984_7 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000286 211.0
BYD1_k127_1586984_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000001021 211.0
BYD1_k127_1586984_9 - - - - 0.000000000000000000000000000000000000000009563 163.0
BYD1_k127_1618575_0 ABC transporter transmembrane region K06147 - - 1.833e-242 762.0
BYD1_k127_1618575_1 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 551.0
BYD1_k127_1618575_10 Belongs to the peptidase S11 family K07258,K07262 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000005915 268.0
BYD1_k127_1618575_11 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000001754 227.0
BYD1_k127_1618575_2 L-lactate dehydrogenase K00101,K00104 - 1.1.2.3,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 542.0
BYD1_k127_1618575_3 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008831 399.0
BYD1_k127_1618575_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009027 357.0
BYD1_k127_1618575_5 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 345.0
BYD1_k127_1618575_6 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 334.0
BYD1_k127_1618575_7 Protein of unknown function (DUF3445) K22342 - 1.14.13.238 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 332.0
BYD1_k127_1618575_8 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 320.0
BYD1_k127_1618575_9 Domain of unknown function (DUF1974) K06445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 304.0
BYD1_k127_1649095_0 PrkA AAA domain K07180 - - 8.913e-321 992.0
BYD1_k127_1649095_1 FAD dependent oxidoreductase - - - 1.287e-197 621.0
BYD1_k127_1649095_10 - - - - 0.00000003378 64.0
BYD1_k127_1649095_2 SpoVR like protein K06415 - - 7.797e-194 614.0
BYD1_k127_1649095_3 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 506.0
BYD1_k127_1649095_4 Protein of unknown function (DUF444) K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 434.0
BYD1_k127_1649095_5 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 395.0
BYD1_k127_1649095_6 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 312.0
BYD1_k127_1649095_7 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009443 319.0
BYD1_k127_1649095_8 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000000000000000000000006224 125.0
BYD1_k127_1649095_9 - - - - 0.0000000000008189 74.0
BYD1_k127_1684390_0 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 571.0
BYD1_k127_1684390_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 398.0
BYD1_k127_1684390_2 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000392 233.0
BYD1_k127_1684390_3 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000001435 59.0
BYD1_k127_1716928_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 450.0
BYD1_k127_1716928_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 332.0
BYD1_k127_1716928_2 COG0017 Aspartyl asparaginyl-tRNA synthetases K01893 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 306.0
BYD1_k127_1716928_3 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000001892 234.0
BYD1_k127_1716928_4 metal-dependent hydrolase of the TIM-barrel fold K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000001248 229.0
BYD1_k127_1716928_5 Cell Wall Hydrolase - - - 0.0000000000000000000000000164 116.0
BYD1_k127_1735425_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 601.0
BYD1_k127_1735425_1 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000326 516.0
BYD1_k127_1735425_10 D-isomer specific 2-hydroxyacid dehydrogenase K12972 - 1.1.1.79,1.1.1.81 0.00000000000000000000000000000000000000000000000000001089 198.0
BYD1_k127_1735425_11 [2Fe-2S] binding domain K18029 - 1.17.2.1 0.000000000000000000000000000000000000000000000001648 188.0
BYD1_k127_1735425_12 - - - - 0.00000000000000000000000000000000271 136.0
BYD1_k127_1735425_13 Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols K04099,K04101 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0008198,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0036238,GO:0042537,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.57,1.13.11.8 0.00000000000000000000003747 110.0
BYD1_k127_1735425_14 Domain of unknown function (DUF4440) - - - 0.00000000000001418 87.0
BYD1_k127_1735425_2 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 488.0
BYD1_k127_1735425_3 FAD binding domain K00481 - 1.14.13.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 449.0
BYD1_k127_1735425_4 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 400.0
BYD1_k127_1735425_5 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 393.0
BYD1_k127_1735425_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 392.0
BYD1_k127_1735425_7 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 307.0
BYD1_k127_1735425_8 Aldolase/RraA K02553,K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 291.0
BYD1_k127_1735425_9 4,5-dihydroxyphthalate decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002763 248.0
BYD1_k127_1771793_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 1.243e-247 775.0
BYD1_k127_1771793_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 6.739e-220 696.0
BYD1_k127_1771793_10 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001863 286.0
BYD1_k127_1771793_11 Pfam:Kce - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005669 272.0
BYD1_k127_1771793_12 dehydratase K18290 - 4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000001598 261.0
BYD1_k127_1771793_13 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008956 241.0
BYD1_k127_1771793_14 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000006245 213.0
BYD1_k127_1771793_15 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000008279 181.0
BYD1_k127_1771793_16 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000002847 185.0
BYD1_k127_1771793_17 NIPSNAP - - - 0.0000000000000000000000000000000000000000002152 160.0
BYD1_k127_1771793_18 polar amino acid ABC transporter, inner membrane subunit K10002 - - 0.00000000000000000000000000000000000000001324 156.0
BYD1_k127_1771793_19 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000103 146.0
BYD1_k127_1771793_2 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 4.413e-209 656.0
BYD1_k127_1771793_20 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000004024 146.0
BYD1_k127_1771793_21 Redoxin domain protein - - - 0.0000000000000000000000000000003572 130.0
BYD1_k127_1771793_22 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000002079 128.0
BYD1_k127_1771793_23 Thioesterase superfamily - - - 0.0000000000000000000000000004583 127.0
BYD1_k127_1771793_24 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000004703 100.0
BYD1_k127_1771793_3 glycolate oxidase subunit GlcD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 518.0
BYD1_k127_1771793_4 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 464.0
BYD1_k127_1771793_5 ABC transporter K02028,K10004 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 407.0
BYD1_k127_1771793_6 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006617 412.0
BYD1_k127_1771793_7 Zinc-binding dehydrogenase K12957,K13953,K19961 - 1.1.1.1,1.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 400.0
BYD1_k127_1771793_8 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 322.0
BYD1_k127_1771793_9 Carboxylesterase family K01066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 316.0
BYD1_k127_1778853_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 2.164e-274 859.0
BYD1_k127_1778853_1 4Fe-4S dicluster domain - - - 3.12e-263 816.0
BYD1_k127_1778853_10 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 449.0
BYD1_k127_1778853_11 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 424.0
BYD1_k127_1778853_12 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 362.0
BYD1_k127_1778853_13 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 335.0
BYD1_k127_1778853_14 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 329.0
BYD1_k127_1778853_15 response regulator receiver K07684 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005293 248.0
BYD1_k127_1778853_16 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002843 243.0
BYD1_k127_1778853_17 TIGRFAM sulfur relay protein TusD DsrE K07235 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0019417,GO:0044237,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000744 223.0
BYD1_k127_1778853_18 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000000000000000000000000009927 201.0
BYD1_k127_1778853_19 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000966 201.0
BYD1_k127_1778853_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 594.0
BYD1_k127_1778853_20 Belongs to the DsrF TusC family K07236 - - 0.00000000000000000000000000000000000000000000000004171 181.0
BYD1_k127_1778853_21 Haem-degrading - - - 0.0000000000000000000000000000000000000000001245 176.0
BYD1_k127_1778853_22 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000004829 159.0
BYD1_k127_1778853_23 sulfur relay protein TusB DsrH K07237 - - 0.0000000000000000000000000000000002704 134.0
BYD1_k127_1778853_24 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000162 112.0
BYD1_k127_1778853_25 Rieske-like [2Fe-2S] domain K14750 - - 0.00000000000000000000000728 104.0
BYD1_k127_1778853_26 - - - - 0.00000000000000000000009534 107.0
BYD1_k127_1778853_27 PFAM biotin lipoate A B protein ligase - - - 0.0003158 49.0
BYD1_k127_1778853_3 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 576.0
BYD1_k127_1778853_4 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 552.0
BYD1_k127_1778853_5 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006091 505.0
BYD1_k127_1778853_6 PFAM Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 505.0
BYD1_k127_1778853_7 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 488.0
BYD1_k127_1778853_8 PFAM Glycosyl transferase, family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 460.0
BYD1_k127_1778853_9 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 449.0
BYD1_k127_1802594_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 527.0
BYD1_k127_1802594_1 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003328 518.0
BYD1_k127_1802594_2 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 381.0
BYD1_k127_1802594_3 Mota tolq exbb proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 299.0
BYD1_k127_1802594_4 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000124 282.0
BYD1_k127_1802594_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000791 249.0
BYD1_k127_1802594_6 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000002252 233.0
BYD1_k127_1802594_7 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000000005007 171.0
BYD1_k127_1802594_8 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.000000000000000000000000000006266 131.0
BYD1_k127_1802594_9 OmpA-like transmembrane domain - - - 0.0000000000000000000001796 106.0
BYD1_k127_1804135_0 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006907 247.0
BYD1_k127_1804135_1 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000143 189.0
BYD1_k127_1804135_2 3-Demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000003812 179.0
BYD1_k127_1804135_3 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.00000000000000000000000000000000000000000006511 176.0
BYD1_k127_1804135_4 YCII-related domain - - - 0.0000000000000000000000000000000000000000001271 169.0
BYD1_k127_1804135_5 YCII-related domain - - - 0.00000000000000000000000000000000000008352 145.0
BYD1_k127_1819403_0 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1189.0
BYD1_k127_1819403_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 8.099e-226 705.0
BYD1_k127_1819403_10 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 372.0
BYD1_k127_1819403_11 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007026 359.0
BYD1_k127_1819403_12 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 340.0
BYD1_k127_1819403_13 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 316.0
BYD1_k127_1819403_14 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 285.0
BYD1_k127_1819403_15 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000252 257.0
BYD1_k127_1819403_16 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003492 245.0
BYD1_k127_1819403_17 Ferritin-like domain K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000006466 237.0
BYD1_k127_1819403_18 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000005503 219.0
BYD1_k127_1819403_19 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000002316 219.0
BYD1_k127_1819403_2 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 2.492e-222 698.0
BYD1_k127_1819403_20 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000001282 188.0
BYD1_k127_1819403_21 TraB family K09973 - - 0.000000000000000000000000000000000000000000004745 186.0
BYD1_k127_1819403_22 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000008076 165.0
BYD1_k127_1819403_23 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000002457 162.0
BYD1_k127_1819403_24 Cold shock protein K03704 - - 0.00000000000000000000000000000000006365 136.0
BYD1_k127_1819403_25 - - - - 0.00000000000000000000000000000005808 130.0
BYD1_k127_1819403_26 Ribosomal L28 family K02902 - - 0.0000000000000000000000000001628 118.0
BYD1_k127_1819403_27 Cytochrome c, class I - - - 0.000000000000000000000000001257 115.0
BYD1_k127_1819403_28 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000002763 95.0
BYD1_k127_1819403_29 Protein of unknown function (DUF3108) - - - 0.00005426 53.0
BYD1_k127_1819403_3 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 3.083e-211 664.0
BYD1_k127_1819403_4 glycolate oxidase iron-sulfur subunit K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 554.0
BYD1_k127_1819403_5 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 536.0
BYD1_k127_1819403_6 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 522.0
BYD1_k127_1819403_7 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 474.0
BYD1_k127_1819403_8 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 434.0
BYD1_k127_1819403_9 FAD binding domain K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 409.0
BYD1_k127_1822092_0 chain 5 L K00341 - 1.6.5.3 4.394e-229 720.0
BYD1_k127_1822092_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 292.0
BYD1_k127_1822092_2 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000005049 238.0
BYD1_k127_1822092_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000003943 163.0
BYD1_k127_1823230_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 9.57e-294 914.0
BYD1_k127_1823230_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 509.0
BYD1_k127_1823230_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 451.0
BYD1_k127_1823230_3 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 417.0
BYD1_k127_1823230_4 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 405.0
BYD1_k127_1823230_5 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 309.0
BYD1_k127_1889967_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 504.0
BYD1_k127_1889967_1 esterase K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 325.0
BYD1_k127_1889967_2 Protein of unknown function (DUF1643) - - - 0.00000000000000000000000000000000000000000000000003556 183.0
BYD1_k127_1889967_3 PFAM Restriction endonuclease K07448 - - 0.00000000000000000000000000000023 143.0
BYD1_k127_1889967_4 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.00000000000000000004297 91.0
BYD1_k127_1889967_5 negative regulator of sigma E activity K03598 - - 0.000000000001055 69.0
BYD1_k127_1958255_0 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 2.983e-283 880.0
BYD1_k127_1958255_1 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 325.0
BYD1_k127_1958255_2 Formate dehydrogenase, alpha subunit K00123,K22015 - 1.17.1.9,1.17.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000001705 252.0
BYD1_k127_1958255_3 PFAM sodium calcium exchanger K07301 - - 0.0000000000000000000000000000000000000001778 164.0
BYD1_k127_1996031_0 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 567.0
BYD1_k127_1996031_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 501.0
BYD1_k127_1996031_2 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 317.0
BYD1_k127_1996031_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 320.0
BYD1_k127_1996031_4 - - - - 0.000000000000000000000000000000000000000000000000003185 190.0
BYD1_k127_1996031_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000005511 99.0
BYD1_k127_1996031_6 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000002494 104.0
BYD1_k127_1996031_7 Glycosyl transferases group 1 - - - 0.0000000000002048 74.0
BYD1_k127_1998829_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 3.648e-302 938.0
BYD1_k127_1998829_1 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 504.0
BYD1_k127_1998829_2 Threonine synthase N terminus K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000002121 179.0
BYD1_k127_1998829_3 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.00000000000000000000000000000000000000000003081 168.0
BYD1_k127_1998829_4 Cytochrome c K08738 - - 0.0000000000000000000000000001281 123.0
BYD1_k127_1998829_5 Cytochrome c-type protein K02569 - - 0.0000000000000000000000000001525 123.0
BYD1_k127_1998829_6 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.0000000000000000002596 99.0
BYD1_k127_1998829_7 PFAM Cyclic nucleotide-binding K01420,K21563 - - 0.000000000000001895 88.0
BYD1_k127_2034874_0 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 1.143e-220 702.0
BYD1_k127_2034874_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 612.0
BYD1_k127_2034874_10 oxidoreductase gamma subunit K00172 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000004117 195.0
BYD1_k127_2034874_11 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000008057 191.0
BYD1_k127_2034874_12 Topoisomerase DNA binding C4 zinc finger K07448 - - 0.000000000000000000000000000000000000000000003446 171.0
BYD1_k127_2034874_13 - - - - 0.0000000000000000000000000000003372 128.0
BYD1_k127_2034874_14 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000449 119.0
BYD1_k127_2034874_2 ABC transporter C-terminal domain K15738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 612.0
BYD1_k127_2034874_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 485.0
BYD1_k127_2034874_4 2-oxoacid ferredoxin oxidoreductase, alpha subunit K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 495.0
BYD1_k127_2034874_5 HI0933-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 460.0
BYD1_k127_2034874_6 helicase superfamily c-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 432.0
BYD1_k127_2034874_7 PFAM Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008358 336.0
BYD1_k127_2034874_8 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 313.0
BYD1_k127_2034874_9 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000002092 225.0
BYD1_k127_2069368_0 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.0 1131.0
BYD1_k127_2069368_1 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 449.0
BYD1_k127_2069368_10 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00008068 48.0
BYD1_k127_2069368_11 response regulator K07665 - - 0.000456 50.0
BYD1_k127_2069368_2 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 430.0
BYD1_k127_2069368_3 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 400.0
BYD1_k127_2069368_4 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 327.0
BYD1_k127_2069368_5 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000461 257.0
BYD1_k127_2069368_6 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000004104 232.0
BYD1_k127_2069368_7 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000003456 214.0
BYD1_k127_2069368_8 carbon monoxide dehydrogenase subunit G K09386 - - 0.0000000000000000000000000000000000000000000000000005914 188.0
BYD1_k127_2069368_9 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000007523 148.0
BYD1_k127_2077009_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 6.494e-197 619.0
BYD1_k127_2077009_1 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 511.0
BYD1_k127_2077009_10 BON domain - - - 0.0000000000000000000000000000000000000000000000000000002283 201.0
BYD1_k127_2077009_11 PFAM OsmC family protein - - - 0.00000000000000000000000000000000000000000000000000004971 194.0
BYD1_k127_2077009_12 Cytochrome c K08738 - - 0.000000000000000000000000000000000000006142 157.0
BYD1_k127_2077009_13 Transcriptional regulator K03892 - - 0.00000000000000000000000000000000005084 136.0
BYD1_k127_2077009_14 Ribbon-helix-helix domain - - - 0.000000000000000000000000001711 115.0
BYD1_k127_2077009_15 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000000000003269 90.0
BYD1_k127_2077009_16 Iron-binding zinc finger CDGSH type K05710 - - 0.00000000003235 68.0
BYD1_k127_2077009_17 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000002142 59.0
BYD1_k127_2077009_2 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 462.0
BYD1_k127_2077009_3 dehydrogenase, E1 component K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 420.0
BYD1_k127_2077009_4 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 295.0
BYD1_k127_2077009_5 Domain of unknown function (DUF4439) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003261 279.0
BYD1_k127_2077009_6 Belongs to the MenA family. Type 1 subfamily K02548 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046428,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000002503 252.0
BYD1_k127_2077009_7 binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000008089 240.0
BYD1_k127_2077009_8 low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000001131 222.0
BYD1_k127_2077009_9 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000005368 206.0
BYD1_k127_2095155_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 361.0
BYD1_k127_2095155_1 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000001117 226.0
BYD1_k127_2095155_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000003471 103.0
BYD1_k127_2211272_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 460.0
BYD1_k127_2211272_1 mechanosensitive ion channel K03442 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009878 250.0
BYD1_k127_2211272_2 2-Nitropropane dioxygenase - - - 0.000000000000000003572 90.0
BYD1_k127_2217536_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 550.0
BYD1_k127_2217536_1 Amidohydrolase K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 491.0
BYD1_k127_2217536_10 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003126 273.0
BYD1_k127_2217536_11 MOSC N-terminal beta barrel domain K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001006 255.0
BYD1_k127_2217536_12 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000009665 229.0
BYD1_k127_2217536_13 PFAM DoxX family protein K15977 - - 0.0000000000000000000000000000000000000000000000001318 183.0
BYD1_k127_2217536_14 CBS domain - - - 0.000000000000000000000000000000000000000000003744 168.0
BYD1_k127_2217536_15 glutathione s-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000005604 167.0
BYD1_k127_2217536_16 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000006225 146.0
BYD1_k127_2217536_17 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000816 140.0
BYD1_k127_2217536_18 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000248 87.0
BYD1_k127_2217536_2 Divalent cation transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 452.0
BYD1_k127_2217536_3 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 441.0
BYD1_k127_2217536_4 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 421.0
BYD1_k127_2217536_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009502 308.0
BYD1_k127_2217536_6 Phospholipase A1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004302 297.0
BYD1_k127_2217536_7 dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 292.0
BYD1_k127_2217536_8 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004634 297.0
BYD1_k127_2217536_9 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002919 280.0
BYD1_k127_2217774_0 NAD dependent epimerase/dehydratase family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 289.0
BYD1_k127_2217774_1 KR domain K00034 - 1.1.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005322 284.0
BYD1_k127_2217774_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000001402 245.0
BYD1_k127_2217774_3 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000016 82.0
BYD1_k127_2392111_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.853e-200 632.0
BYD1_k127_2392111_1 phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 457.0
BYD1_k127_2392111_2 Transporter associated domain K06189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 384.0
BYD1_k127_2392111_3 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 354.0
BYD1_k127_2392111_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000003731 205.0
BYD1_k127_2392111_5 Membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000001429 194.0
BYD1_k127_2392111_6 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000005672 142.0
BYD1_k127_2445250_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K18361 - 1.17.5.1,3.1.2.25 0.0 1203.0
BYD1_k127_2445250_1 COG0437 Fe-S-cluster-containing hydrogenase components 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004824 329.0
BYD1_k127_2445250_2 branched-chain amino acid transport K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 296.0
BYD1_k127_2445250_3 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002213 294.0
BYD1_k127_2445250_4 Thioesterase - - - 0.00000000000000000000000000000000000000005648 165.0
BYD1_k127_2445250_5 dmso reductase anchor subunit K18363 - - 0.0000000000000000000000005305 117.0
BYD1_k127_2445250_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000001083 105.0
BYD1_k127_2453021_0 extracellular solute-binding protein - - - 5.941e-285 890.0
BYD1_k127_2453021_1 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 518.0
BYD1_k127_2453021_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006585 509.0
BYD1_k127_2453021_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 509.0
BYD1_k127_2453021_4 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009613 429.0
BYD1_k127_2453021_5 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 372.0
BYD1_k127_2453021_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000002742 102.0
BYD1_k127_2468256_0 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046,K00065 - 1.1.1.127,1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000002174 263.0
BYD1_k127_2468256_1 Transglycosylase associated protein - - - 0.0000000000000000000000000000000001559 134.0
BYD1_k127_2468443_0 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 364.0
BYD1_k127_2468443_1 elongation factor G K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 362.0
BYD1_k127_2468443_2 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 357.0
BYD1_k127_2468443_3 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005989 293.0
BYD1_k127_2468443_4 Domain of unknown function (DUF4340) - - - 0.0000000000000000002017 102.0
BYD1_k127_2487402_0 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005977 296.0
BYD1_k127_2487402_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005756 254.0
BYD1_k127_2487402_2 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000001644 220.0
BYD1_k127_2487402_3 PIN domain - - - 0.0000000000000000009054 97.0
BYD1_k127_2487402_4 positive regulation of growth - GO:0006417,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0040007,GO:0045727,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0080090,GO:2000112 - 0.000000001123 62.0
BYD1_k127_2487404_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 2.051e-233 729.0
BYD1_k127_2487404_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009361 398.0
BYD1_k127_2487404_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001969 252.0
BYD1_k127_2487404_3 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000001494 179.0
BYD1_k127_2487404_5 Bacterial protein of unknown function (DUF883) - - - 0.0000001525 54.0
BYD1_k127_2501697_0 Extracellular ligand-binding receptor K01999 - - 1.021e-216 679.0
BYD1_k127_2501697_1 Uncharacterized protein conserved in bacteria (DUF2090) K03338 - 2.7.1.92 4.458e-200 655.0
BYD1_k127_2501697_2 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 414.0
BYD1_k127_2501697_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 378.0
BYD1_k127_2501697_4 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 315.0
BYD1_k127_2501697_5 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 309.0
BYD1_k127_2501697_6 PFAM 6-phosphogluconate dehydrogenase NAD-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 314.0
BYD1_k127_2501697_7 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006876 255.0
BYD1_k127_2501697_8 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.00000000000000000000000000000000000000000000000000000002551 201.0
BYD1_k127_2501697_9 Helix-turn-helix domain, rpiR family - - - 0.00000000000000000000000000000000000000000000000000002067 200.0
BYD1_k127_2504380_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.269e-242 763.0
BYD1_k127_2504380_1 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 6.441e-230 736.0
BYD1_k127_2504380_2 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003157 284.0
BYD1_k127_2504380_3 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000003116 160.0
BYD1_k127_2504380_4 ribosomal large subunit export from nucleus - - - 0.00000000000000000000000000000000000005979 164.0
BYD1_k127_2504380_5 PFAM zinc finger, DksA TraR C4-type - - - 0.00000000000000000000000001131 124.0
BYD1_k127_2504380_6 - - - - 0.0000000000000000000001398 100.0
BYD1_k127_2504380_7 Acts as a magnesium transporter K06213 - - 0.0000000000000000004713 88.0
BYD1_k127_2504380_8 Bacterial protein of unknown function (DUF883) - - - 0.000000000000004136 79.0
BYD1_k127_256375_0 Aldehyde dehydrogenase family K21802 - 1.2.1.67 7.301e-253 786.0
BYD1_k127_256375_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 6.253e-230 733.0
BYD1_k127_256375_10 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 513.0
BYD1_k127_256375_11 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 393.0
BYD1_k127_256375_12 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 383.0
BYD1_k127_256375_13 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 392.0
BYD1_k127_256375_14 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 372.0
BYD1_k127_256375_15 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008682 370.0
BYD1_k127_256375_16 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 376.0
BYD1_k127_256375_17 RNA polymerase sigma K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 360.0
BYD1_k127_256375_18 oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 358.0
BYD1_k127_256375_19 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 347.0
BYD1_k127_256375_2 Bacterial protein of unknown function (DUF853) K06915 - - 1.131e-211 681.0
BYD1_k127_256375_20 Branched-chain amino acid ATP-binding cassette transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 327.0
BYD1_k127_256375_21 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 303.0
BYD1_k127_256375_22 Branched-chain amino acid transport K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 304.0
BYD1_k127_256375_23 cell division K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 298.0
BYD1_k127_256375_24 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 307.0
BYD1_k127_256375_25 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005737 265.0
BYD1_k127_256375_26 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001933 252.0
BYD1_k127_256375_27 oxidase assembly K02258 - - 0.000000000000000000000000000000000000000000000000000000000000000000000102 244.0
BYD1_k127_256375_28 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000007549 232.0
BYD1_k127_256375_29 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000001884 221.0
BYD1_k127_256375_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.103e-207 649.0
BYD1_k127_256375_30 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000002582 218.0
BYD1_k127_256375_31 RNA methyltransferase, RsmD family - - - 0.000000000000000000000000000000000000000000000000008542 188.0
BYD1_k127_256375_32 signal sequence binding - - - 0.00000000000000000000000000000000000000001192 161.0
BYD1_k127_256375_33 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000009381 155.0
BYD1_k127_256375_34 Outer membrane lipoprotein LolB - - - 0.0000000000000000000000000000000007121 137.0
BYD1_k127_256375_35 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000005215 124.0
BYD1_k127_256375_36 Protein of unknown function (DUF2909) - - - 0.00000000000306 72.0
BYD1_k127_256375_37 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000004444 65.0
BYD1_k127_256375_38 Protein of unknown function (DUF2970) - - - 0.00007383 51.0
BYD1_k127_256375_4 belongs to the aldehyde dehydrogenase family - - - 8.596e-201 639.0
BYD1_k127_256375_5 Protein of unknown function (DUF933) K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005078 531.0
BYD1_k127_256375_6 protein conserved in bacteria K07192 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 522.0
BYD1_k127_256375_7 Animal haem peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 524.0
BYD1_k127_256375_8 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 511.0
BYD1_k127_256375_9 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 499.0
BYD1_k127_2580622_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 611.0
BYD1_k127_2580622_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 472.0
BYD1_k127_2580622_10 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005167 252.0
BYD1_k127_2580622_11 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000007891 254.0
BYD1_k127_2580622_12 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000001922 209.0
BYD1_k127_2580622_13 Bacterial regulatory proteins, tetR family K05501 - - 0.00000000000000000000000000000000000000000000000000000002244 223.0
BYD1_k127_2580622_14 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000008324 216.0
BYD1_k127_2580622_15 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000002573 191.0
BYD1_k127_2580622_16 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000009572 133.0
BYD1_k127_2580622_17 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000004468 143.0
BYD1_k127_2580622_18 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000000000004183 124.0
BYD1_k127_2580622_19 Bacterial SH3 domain - - - 0.00000000000000000000000000007894 128.0
BYD1_k127_2580622_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 440.0
BYD1_k127_2580622_20 membrane - - - 0.00000000000000001874 91.0
BYD1_k127_2580622_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 430.0
BYD1_k127_2580622_4 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 448.0
BYD1_k127_2580622_5 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 379.0
BYD1_k127_2580622_6 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 379.0
BYD1_k127_2580622_7 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 332.0
BYD1_k127_2580622_8 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003156 269.0
BYD1_k127_2580622_9 peptidase, M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008431 268.0
BYD1_k127_265591_0 AMP-binding enzyme K12508 - 6.2.1.34 2.686e-197 645.0
BYD1_k127_265591_1 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 590.0
BYD1_k127_265591_10 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 351.0
BYD1_k127_265591_11 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 322.0
BYD1_k127_265591_12 Secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 308.0
BYD1_k127_265591_13 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 300.0
BYD1_k127_265591_14 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 290.0
BYD1_k127_265591_15 Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000000000000003567 225.0
BYD1_k127_265591_16 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000000000000000000000000000000000000001437 205.0
BYD1_k127_265591_17 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000003715 200.0
BYD1_k127_265591_18 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000003195 202.0
BYD1_k127_265591_19 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000001705 126.0
BYD1_k127_265591_2 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 573.0
BYD1_k127_265591_20 Transcriptional regulator, MarR family - - - 0.00000000000000000000001817 106.0
BYD1_k127_265591_21 glycosyl transferase, family 2 - - - 0.0001199 44.0
BYD1_k127_265591_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 501.0
BYD1_k127_265591_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 413.0
BYD1_k127_265591_5 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 407.0
BYD1_k127_265591_6 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 397.0
BYD1_k127_265591_7 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 380.0
BYD1_k127_265591_8 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 379.0
BYD1_k127_265591_9 (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 391.0
BYD1_k127_267385_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 3.62e-215 688.0
BYD1_k127_267385_1 aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 622.0
BYD1_k127_267385_10 PFAM histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000006538 269.0
BYD1_k127_267385_11 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001207 270.0
BYD1_k127_267385_12 enzyme of heme biosynthesis K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005306 269.0
BYD1_k127_267385_13 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000001072 244.0
BYD1_k127_267385_14 UbiH UbiF VisC COQ6 family K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000261 239.0
BYD1_k127_267385_15 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000005048 182.0
BYD1_k127_267385_16 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.0000000000000000000000000000006309 125.0
BYD1_k127_267385_17 Bacterial regulatory protein, Fis family K03557 - - 0.0000000000000000000000571 106.0
BYD1_k127_267385_2 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 594.0
BYD1_k127_267385_3 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008693 586.0
BYD1_k127_267385_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 563.0
BYD1_k127_267385_5 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 437.0
BYD1_k127_267385_6 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007981 426.0
BYD1_k127_267385_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 394.0
BYD1_k127_267385_8 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006299 336.0
BYD1_k127_267385_9 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 296.0
BYD1_k127_2695948_0 Tripartite tricarboxylate transporter TctA family K07793 - - 7.392e-245 763.0
BYD1_k127_2695948_1 PAS fold - - - 2.999e-213 679.0
BYD1_k127_2695948_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 520.0
BYD1_k127_2695948_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 478.0
BYD1_k127_2695948_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007797 408.0
BYD1_k127_2695948_5 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009647 378.0
BYD1_k127_2695948_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000007029 256.0
BYD1_k127_2695948_7 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000001132 187.0
BYD1_k127_2695948_8 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000506 124.0
BYD1_k127_2695948_9 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000001407 117.0
BYD1_k127_2704174_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 4.185e-228 717.0
BYD1_k127_2704174_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008531 572.0
BYD1_k127_2704174_2 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 376.0
BYD1_k127_2704174_3 Serine aminopeptidase, S33 K06889,K07397 - - 0.000000000000000000000000212 106.0
BYD1_k127_2707747_0 4Fe-4S binding domain K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 462.0
BYD1_k127_2707747_1 DMSO reductase anchor subunit (DmsC) K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 327.0
BYD1_k127_2707747_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 291.0
BYD1_k127_2707747_3 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000009004 183.0
BYD1_k127_2707747_4 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000003823 126.0
BYD1_k127_2729514_0 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 8.992e-207 658.0
BYD1_k127_2729514_1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg K00174 - 1.2.7.11,1.2.7.3 8.44e-206 654.0
BYD1_k127_2729514_10 Rubrerythrin - - - 0.00000000000000000000000000000000009804 150.0
BYD1_k127_2729514_2 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 562.0
BYD1_k127_2729514_3 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007435 549.0
BYD1_k127_2729514_4 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 431.0
BYD1_k127_2729514_5 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 311.0
BYD1_k127_2729514_6 KR domain K07535 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 303.0
BYD1_k127_2729514_7 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000011 278.0
BYD1_k127_2729514_8 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000008104 203.0
BYD1_k127_2729514_9 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000000000000000000000000001437 174.0
BYD1_k127_2731827_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1303.0
BYD1_k127_2731827_1 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 0.0 1088.0
BYD1_k127_2731827_10 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000003663 256.0
BYD1_k127_2731827_11 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000007131 221.0
BYD1_k127_2731827_12 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000006162 204.0
BYD1_k127_2731827_13 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000002541 164.0
BYD1_k127_2731827_14 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000002525 161.0
BYD1_k127_2731827_15 Protein of unknown function (DUF3579) - - - 0.0000000000000000000002184 100.0
BYD1_k127_2731827_16 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000868 86.0
BYD1_k127_2731827_2 Neisseria PilC beta-propeller domain K02674 - - 7.899e-262 855.0
BYD1_k127_2731827_3 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 9.962e-231 723.0
BYD1_k127_2731827_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 4.705e-205 650.0
BYD1_k127_2731827_5 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 511.0
BYD1_k127_2731827_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 503.0
BYD1_k127_2731827_7 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 462.0
BYD1_k127_2731827_8 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 327.0
BYD1_k127_2731827_9 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000001353 243.0
BYD1_k127_2741723_0 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 572.0
BYD1_k127_2741723_1 Sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 333.0
BYD1_k127_2741723_2 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 313.0
BYD1_k127_2741723_3 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002076 279.0
BYD1_k127_2741723_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 278.0
BYD1_k127_2741723_5 Aldo keto - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002041 292.0
BYD1_k127_2741723_6 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000004177 236.0
BYD1_k127_2741723_7 UTRA K03710 - - 0.0000000000000000000000000000000001057 144.0
BYD1_k127_2741723_8 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.00000000000000000000000005382 120.0
BYD1_k127_2747551_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008452 572.0
BYD1_k127_2747551_1 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009931 525.0
BYD1_k127_2747551_2 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 372.0
BYD1_k127_2747551_3 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000002796 166.0
BYD1_k127_2747551_4 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000002759 112.0
BYD1_k127_2747551_5 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.000000000000001376 81.0
BYD1_k127_2747551_6 Lipopolysaccharide assembly protein A domain K08992 - - 0.00000000004012 66.0
BYD1_k127_2804675_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 579.0
BYD1_k127_2804675_1 acyl-CoA transferases carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 427.0
BYD1_k127_2804675_2 CoA binding domain - - - 0.00000000000000000000000000000000000000000000006303 177.0
BYD1_k127_2804675_3 - - - - 0.00002288 53.0
BYD1_k127_2831891_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.227e-229 752.0
BYD1_k127_2831891_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 4.086e-228 723.0
BYD1_k127_2831891_10 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000002395 198.0
BYD1_k127_2831891_11 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000008253 167.0
BYD1_k127_2831891_2 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 605.0
BYD1_k127_2831891_3 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 572.0
BYD1_k127_2831891_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 505.0
BYD1_k127_2831891_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 486.0
BYD1_k127_2831891_6 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 347.0
BYD1_k127_2831891_7 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 335.0
BYD1_k127_2831891_8 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 309.0
BYD1_k127_2831891_9 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001069 266.0
BYD1_k127_2845420_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 552.0
BYD1_k127_2845420_1 protein involved in propionate catabolism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 514.0
BYD1_k127_2845420_2 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000006538 79.0
BYD1_k127_2845420_3 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000002427 55.0
BYD1_k127_2944707_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.184e-215 678.0
BYD1_k127_2944707_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.106e-211 674.0
BYD1_k127_2944707_10 HD domain K07814,K13815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 380.0
BYD1_k127_2944707_11 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 368.0
BYD1_k127_2944707_12 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 358.0
BYD1_k127_2944707_13 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 336.0
BYD1_k127_2944707_14 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001197 293.0
BYD1_k127_2944707_15 TIGRFAM methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003829 254.0
BYD1_k127_2944707_16 COG3245 Cytochrome c5 - - - 0.000000000000000000000000000000000000000000000000000000000000000001474 236.0
BYD1_k127_2944707_17 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000002526 148.0
BYD1_k127_2944707_18 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000007956 143.0
BYD1_k127_2944707_19 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000007753 138.0
BYD1_k127_2944707_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.531e-208 659.0
BYD1_k127_2944707_20 Phosphotransferase System K11189 - - 0.0000000000000000000000000000007812 123.0
BYD1_k127_2944707_21 Protein of unknown function (DUF2905) - - - 0.000000000000000000000001353 104.0
BYD1_k127_2944707_22 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000003094 108.0
BYD1_k127_2944707_23 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000007892 109.0
BYD1_k127_2944707_24 - - - - 0.00000000000000003698 91.0
BYD1_k127_2944707_25 general secretion pathway protein - - - 0.00002618 48.0
BYD1_k127_2944707_3 Rod shape-determining protein MreB K03569 - - 2.811e-202 632.0
BYD1_k127_2944707_4 Major facilitator superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 597.0
BYD1_k127_2944707_5 Belongs to the amidase family K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 610.0
BYD1_k127_2944707_6 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 572.0
BYD1_k127_2944707_7 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 507.0
BYD1_k127_2944707_8 ribonuclease, Rne Rng family K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 486.0
BYD1_k127_2944707_9 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 391.0
BYD1_k127_2965745_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1351.0
BYD1_k127_2965745_1 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.455e-225 704.0
BYD1_k127_2965745_2 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 539.0
BYD1_k127_2965745_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 403.0
BYD1_k127_2965745_4 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000001427 222.0
BYD1_k127_2965745_5 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000006019 220.0
BYD1_k127_2965745_6 Flavinator of succinate dehydrogenase K09159 - - 0.000000000144 72.0
BYD1_k127_2965745_7 PspC domain K03973 - - 0.000003879 54.0
BYD1_k127_29856_0 B12 binding domain K00548 - 2.1.1.13 0.0 1641.0
BYD1_k127_29856_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1206.0
BYD1_k127_29856_10 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 580.0
BYD1_k127_29856_11 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 569.0
BYD1_k127_29856_12 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 564.0
BYD1_k127_29856_13 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 472.0
BYD1_k127_29856_14 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 442.0
BYD1_k127_29856_15 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 436.0
BYD1_k127_29856_16 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 407.0
BYD1_k127_29856_17 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 410.0
BYD1_k127_29856_18 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 409.0
BYD1_k127_29856_19 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 383.0
BYD1_k127_29856_2 dna topoisomerase III K03169 - 5.99.1.2 0.0 1096.0
BYD1_k127_29856_20 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 374.0
BYD1_k127_29856_21 Protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 360.0
BYD1_k127_29856_22 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009696 332.0
BYD1_k127_29856_23 PFAM Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 332.0
BYD1_k127_29856_24 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 305.0
BYD1_k127_29856_25 AMP-binding enzyme C-terminal domain K04110,K20458 - 6.2.1.25,6.2.1.27,6.2.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 310.0
BYD1_k127_29856_26 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 294.0
BYD1_k127_29856_27 Catalyzes the cycloisomerization of cis,cis-muconate K01857 - 5.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003254 293.0
BYD1_k127_29856_28 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003931 268.0
BYD1_k127_29856_29 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000005185 271.0
BYD1_k127_29856_3 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 6.332e-297 921.0
BYD1_k127_29856_30 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000001006 228.0
BYD1_k127_29856_31 Protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000001688 239.0
BYD1_k127_29856_32 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000001131 199.0
BYD1_k127_29856_33 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000002897 195.0
BYD1_k127_29856_34 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000000000000000001389 175.0
BYD1_k127_29856_35 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000003138 170.0
BYD1_k127_29856_36 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000001398 168.0
BYD1_k127_29856_37 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000003461 139.0
BYD1_k127_29856_38 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000005128 136.0
BYD1_k127_29856_39 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000007299 137.0
BYD1_k127_29856_4 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 4.322e-290 901.0
BYD1_k127_29856_40 membrane - - - 0.00000000000000000000000000007331 121.0
BYD1_k127_29856_41 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000008426 109.0
BYD1_k127_29856_42 Thioesterase superfamily - - - 0.00000000000000000000000427 106.0
BYD1_k127_29856_43 ATP synthase I chain K02116 - - 0.0000000000000000005717 91.0
BYD1_k127_29856_44 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000001482 68.0
BYD1_k127_29856_45 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.000000001943 65.0
BYD1_k127_29856_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.118e-277 857.0
BYD1_k127_29856_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 5.349e-263 815.0
BYD1_k127_29856_7 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 3.677e-210 676.0
BYD1_k127_29856_8 ammonium transporter K03320 - - 4.934e-207 656.0
BYD1_k127_29856_9 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 611.0
BYD1_k127_3001855_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 569.0
BYD1_k127_3001855_1 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 344.0
BYD1_k127_3001855_2 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 317.0
BYD1_k127_3001855_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000005422 59.0
BYD1_k127_3043045_0 acyl-CoA dehydrogenase activity K09456 - - 1.613e-209 665.0
BYD1_k127_3043045_1 Bifunctional enoyl-CoA hydratase phosphate acetyltransferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 564.0
BYD1_k127_3043045_10 Iron-sulfur cluster assembly protein - - - 0.0000000000000000000000000000002815 125.0
BYD1_k127_3043045_11 gluconolactonase activity K07004,K14274 - - 0.0000000000000000000000000001875 127.0
BYD1_k127_3043045_12 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000008038 112.0
BYD1_k127_3043045_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 408.0
BYD1_k127_3043045_3 Adenylate guanylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 363.0
BYD1_k127_3043045_4 PFAM Serine threonine protein kinase-related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004122 367.0
BYD1_k127_3043045_5 Uncharacterised MFS-type transporter YbfB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 346.0
BYD1_k127_3043045_6 Vitamin k epoxide reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008182 246.0
BYD1_k127_3043045_7 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000003346 230.0
BYD1_k127_3043045_8 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.00000000000000000000000000000000000000000000002557 171.0
BYD1_k127_3043045_9 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000004409 154.0
BYD1_k127_3130834_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 4.731e-293 929.0
BYD1_k127_3130834_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 1.14e-240 769.0
BYD1_k127_3130834_2 DNA replication, recombination, and repair K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 601.0
BYD1_k127_3130834_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 534.0
BYD1_k127_3130834_4 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 462.0
BYD1_k127_3130834_5 Transcriptional regulator crp fnr family K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005463 258.0
BYD1_k127_3130834_6 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000001399 226.0
BYD1_k127_3130834_7 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0006797 48.0
BYD1_k127_3133186_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.604e-272 844.0
BYD1_k127_3133186_1 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 8.658e-252 782.0
BYD1_k127_3133186_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 9.857e-232 734.0
BYD1_k127_3133186_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 5.031e-207 653.0
BYD1_k127_3133186_4 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 386.0
BYD1_k127_3133186_5 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000009828 221.0
BYD1_k127_3133186_6 oligoketide cyclase lipid transport protein - - - 0.0000000000000000000000000000000000000001123 155.0
BYD1_k127_3133186_7 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000002267 82.0
BYD1_k127_3133186_8 Domain of unknown function (DUF4124) - - - 0.00000000004327 77.0
BYD1_k127_31574_0 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000066 287.0
BYD1_k127_31574_1 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008842 273.0
BYD1_k127_31574_2 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000009139 226.0
BYD1_k127_31574_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000002553 195.0
BYD1_k127_31574_4 Cytochrome c - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000005077 110.0
BYD1_k127_31574_5 - - - - 0.0000000000000000001147 90.0
BYD1_k127_3181634_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 2.834e-197 629.0
BYD1_k127_3181634_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 9.19e-197 623.0
BYD1_k127_3181634_10 Cytochrome c - - - 0.000000000000005312 85.0
BYD1_k127_3181634_2 PFAM Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 518.0
BYD1_k127_3181634_3 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 425.0
BYD1_k127_3181634_4 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000234 213.0
BYD1_k127_3181634_5 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000000671 201.0
BYD1_k127_3181634_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000000000000002664 201.0
BYD1_k127_3181634_7 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000001552 137.0
BYD1_k127_3181634_8 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000001959 125.0
BYD1_k127_3181634_9 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.00000000000000000002113 100.0
BYD1_k127_3218990_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000004603 209.0
BYD1_k127_3218990_1 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000001186 101.0
BYD1_k127_3218990_2 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000002729 90.0
BYD1_k127_3221701_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 454.0
BYD1_k127_3221701_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 384.0
BYD1_k127_3221701_2 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006898 355.0
BYD1_k127_3221701_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000003125 213.0
BYD1_k127_3221701_4 response regulator receiver K07659 - - 0.000000000000000000000000000000000000000000000003132 178.0
BYD1_k127_3221701_5 Globin - - - 0.000000000000000000000000000000000000000002267 161.0
BYD1_k127_3221701_6 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.000000000000000000464 98.0
BYD1_k127_3221701_7 CoA-binding domain protein K09181 - - 0.0000000000000001463 86.0
BYD1_k127_3221701_8 homocysteine K00547 - 2.1.1.10 0.0000151 51.0
BYD1_k127_3226095_0 TonB dependent receptor K02014,K16089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008921 573.0
BYD1_k127_3226095_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 530.0
BYD1_k127_3226095_10 DGC domain - - - 0.00000000000000000000000000000000000000009587 157.0
BYD1_k127_3226095_11 Chromate transporter K07240 - - 0.000000000000000000000000000000000001629 145.0
BYD1_k127_3226095_12 - - - - 0.000000000000000000000000000000000002394 143.0
BYD1_k127_3226095_13 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000009091 143.0
BYD1_k127_3226095_14 Flavin reductase like domain - - - 0.0000000000000000000000000000000001129 139.0
BYD1_k127_3226095_15 - - - - 0.0000000000000000000000000000007053 128.0
BYD1_k127_3226095_16 Protein of unknown function (DUF2892) - - - 0.00000000000000000005849 93.0
BYD1_k127_3226095_17 - - - - 0.0000000000002729 74.0
BYD1_k127_3226095_18 Antibiotic biosynthesis monooxygenase - - - 0.00000000000034 73.0
BYD1_k127_3226095_2 two-component response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 506.0
BYD1_k127_3226095_21 Major Facilitator Superfamily - - - 0.00000000002516 77.0
BYD1_k127_3226095_22 Belongs to the 'phage' integrase family - - - 0.000000001038 60.0
BYD1_k127_3226095_23 - - - - 0.000000007859 57.0
BYD1_k127_3226095_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 436.0
BYD1_k127_3226095_4 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 363.0
BYD1_k127_3226095_5 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 306.0
BYD1_k127_3226095_6 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002057 282.0
BYD1_k127_3226095_7 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000004627 197.0
BYD1_k127_3226095_8 - - - - 0.00000000000000000000000000000000000000000000000000001372 198.0
BYD1_k127_3226095_9 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000007434 170.0
BYD1_k127_3239058_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1225.0
BYD1_k127_3239058_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 535.0
BYD1_k127_3239058_2 PFAM AAA ATPase central domain protein K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 409.0
BYD1_k127_3239058_3 PFAM Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 331.0
BYD1_k127_3239058_4 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000004966 172.0
BYD1_k127_3239058_5 - - - - 0.00000000000000000000000000000000000000000008877 168.0
BYD1_k127_3239058_6 - - - - 0.0000000000000000000000000000000000001856 147.0
BYD1_k127_3239058_7 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000006782 139.0
BYD1_k127_3239058_8 - - - - 0.0000002051 57.0
BYD1_k127_3263501_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1416.0
BYD1_k127_3263501_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005287 361.0
BYD1_k127_3263501_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 321.0
BYD1_k127_3263501_3 - - - - 0.0000000000000000000000000000000000000000000000000000000005861 212.0
BYD1_k127_3263501_4 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000007322 135.0
BYD1_k127_3276682_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 490.0
BYD1_k127_3276682_1 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 407.0
BYD1_k127_3276682_2 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 339.0
BYD1_k127_3276682_3 - - - - 0.0005617 48.0
BYD1_k127_3292475_0 ABC-type dipeptide transport system, periplasmic component K02035 - - 2.96e-223 706.0
BYD1_k127_3292475_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 552.0
BYD1_k127_3292475_10 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 315.0
BYD1_k127_3292475_11 N-terminal TM domain of oligopeptide transport permease C - - - 0.00000000000000000000000000000000000000000000000000000000000003299 219.0
BYD1_k127_3292475_12 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.0000000000000000000000000000000000000000000000000000000000003487 214.0
BYD1_k127_3292475_13 peptidase S16 K07157 - - 0.000000000000000000000000000000000000000000000000000000004765 206.0
BYD1_k127_3292475_14 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000001508 175.0
BYD1_k127_3292475_15 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000009792 189.0
BYD1_k127_3292475_16 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.0000000000000000000000000000000000000001924 162.0
BYD1_k127_3292475_17 ribosomal subunit interface protein K05808 - - 0.000000000000000000000000000000000005278 139.0
BYD1_k127_3292475_18 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.0000000000000000000000000000000195 136.0
BYD1_k127_3292475_19 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.00000000000000000000000000000002609 136.0
BYD1_k127_3292475_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009136 469.0
BYD1_k127_3292475_20 - - - - 0.000000000000006313 78.0
BYD1_k127_3292475_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 465.0
BYD1_k127_3292475_4 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007898 474.0
BYD1_k127_3292475_5 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 409.0
BYD1_k127_3292475_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009674 424.0
BYD1_k127_3292475_7 Lipopolysaccharide export system ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009444 369.0
BYD1_k127_3292475_8 a g-specific adenine glycosylase K03575 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 355.0
BYD1_k127_3292475_9 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 328.0
BYD1_k127_3323330_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1334.0
BYD1_k127_3323330_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 6.061e-262 821.0
BYD1_k127_3323330_2 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 4.479e-232 721.0
BYD1_k127_3323330_3 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 323.0
BYD1_k127_3323330_4 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003613 257.0
BYD1_k127_3323330_5 ribonucleoside-diphosphate reductase activity K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000003465 104.0
BYD1_k127_3323330_6 Uncharacterized ACR, COG1678 - - - 0.0000000000000000001039 102.0
BYD1_k127_3323330_7 - - - - 0.0000000000112 78.0
BYD1_k127_3323330_8 electron transfer flavoprotein, alpha subunit K03522 - - 0.00000004988 54.0
BYD1_k127_3337970_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.279e-208 656.0
BYD1_k127_3337970_1 Cobalamin synthesis protein cobW C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 445.0
BYD1_k127_3337970_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 282.0
BYD1_k127_3337970_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001065 282.0
BYD1_k127_3337970_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000006084 194.0
BYD1_k127_3337970_5 Hsp20/alpha crystallin family - - - 0.0000000000000000000000000000000000000000004095 166.0
BYD1_k127_3337970_6 Putative zinc-finger - - - 0.000000000000007775 77.0
BYD1_k127_3337970_7 Cysteine-rich CWC - - - 0.00002134 51.0
BYD1_k127_3421420_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.114e-217 691.0
BYD1_k127_3421420_1 Protein of unknown function (DUF1343) - - - 1.351e-211 666.0
BYD1_k127_3421420_10 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007667 291.0
BYD1_k127_3421420_11 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000002777 266.0
BYD1_k127_3421420_12 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000513 267.0
BYD1_k127_3421420_13 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001712 264.0
BYD1_k127_3421420_14 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000003237 263.0
BYD1_k127_3421420_15 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000002145 234.0
BYD1_k127_3421420_16 Male sterility protein K22025 - 1.1.1.410 0.000000000000000000000000000000000000000000000000000000000000000001168 252.0
BYD1_k127_3421420_17 type 4 pilus biogenesis protein K02656 - - 0.000000000000000000000000000000000000000000000000000000000002303 233.0
BYD1_k127_3421420_18 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000000000003969 148.0
BYD1_k127_3421420_19 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000003505 114.0
BYD1_k127_3421420_2 GcpE protein K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 589.0
BYD1_k127_3421420_20 - - - - 0.0000000000000000000001459 99.0
BYD1_k127_3421420_21 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000001682 96.0
BYD1_k127_3421420_22 - - - - 0.0000000000000001508 81.0
BYD1_k127_3421420_3 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 525.0
BYD1_k127_3421420_4 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 518.0
BYD1_k127_3421420_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004779 500.0
BYD1_k127_3421420_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 409.0
BYD1_k127_3421420_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 385.0
BYD1_k127_3421420_8 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 296.0
BYD1_k127_3421420_9 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002157 302.0
BYD1_k127_3423026_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003277 451.0
BYD1_k127_3423026_1 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000002454 198.0
BYD1_k127_3423026_2 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000007789 153.0
BYD1_k127_3423026_3 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.0000000000000000002384 93.0
BYD1_k127_3423026_4 KR domain K00059 - 1.1.1.100 0.00000000000000001128 86.0
BYD1_k127_3430347_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 3.787e-211 665.0
BYD1_k127_3430347_1 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.028e-207 668.0
BYD1_k127_3430347_10 cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 362.0
BYD1_k127_3430347_11 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 291.0
BYD1_k127_3430347_12 POTRA domain, FtsQ-type - - - 0.000000000000000000000000000000000000000000004135 172.0
BYD1_k127_3430347_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000001459 98.0
BYD1_k127_3430347_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005813 581.0
BYD1_k127_3430347_3 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 571.0
BYD1_k127_3430347_4 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 471.0
BYD1_k127_3430347_5 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 480.0
BYD1_k127_3430347_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 475.0
BYD1_k127_3430347_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 469.0
BYD1_k127_3430347_8 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 460.0
BYD1_k127_3430347_9 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 425.0
BYD1_k127_3436332_0 Neisseria PilC beta-propeller domain K02674 - - 1.048e-278 899.0
BYD1_k127_3436332_1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 1.134e-218 702.0
BYD1_k127_3436332_10 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000009201 201.0
BYD1_k127_3436332_11 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000161 164.0
BYD1_k127_3436332_12 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000009195 148.0
BYD1_k127_3436332_13 Pilus assembly protein PilX - - - 0.00000000000000000000000000000000001141 144.0
BYD1_k127_3436332_14 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000002473 137.0
BYD1_k127_3436332_15 type IV pilus modification protein PilV - - - 0.0000000000000000000000000000001321 138.0
BYD1_k127_3436332_16 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000001362 129.0
BYD1_k127_3436332_17 Protein of unknown function (DUF1304) K08987 - - 0.00000000000000000000000004914 108.0
BYD1_k127_3436332_18 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000009953 102.0
BYD1_k127_3436332_2 PFAM extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 635.0
BYD1_k127_3436332_20 protein transport across the cell outer membrane K08084 - - 0.000000000000000000001388 106.0
BYD1_k127_3436332_21 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.0000000000000000003724 94.0
BYD1_k127_3436332_22 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000002955 85.0
BYD1_k127_3436332_23 Protein of unknown function (DUF1304) K08987 - - 0.0000122 48.0
BYD1_k127_3436332_3 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 510.0
BYD1_k127_3436332_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 459.0
BYD1_k127_3436332_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008655 428.0
BYD1_k127_3436332_6 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 306.0
BYD1_k127_3436332_7 Type IV Pilus-assembly protein W K02672 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 301.0
BYD1_k127_3436332_8 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000389 249.0
BYD1_k127_3436332_9 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000004854 214.0
BYD1_k127_3437668_0 Aminotransferase class I and II K14261 - - 1.761e-221 698.0
BYD1_k127_3437668_1 homoserine dehydrogenase K00003 - 1.1.1.3 7.235e-198 629.0
BYD1_k127_3437668_2 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 593.0
BYD1_k127_3437668_3 hydrolase activity, acting on ester bonds K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002232 358.0
BYD1_k127_3437668_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001975 288.0
BYD1_k127_3437668_5 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000000000000000003102 143.0
BYD1_k127_3437668_6 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.000000767 61.0
BYD1_k127_3437668_7 bacterioferritin comigratory protein K03564 - 1.11.1.15 0.0008002 42.0
BYD1_k127_3440814_0 Heparinase II/III N-terminus - - - 2.779e-205 665.0
BYD1_k127_3440814_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.761e-195 618.0
BYD1_k127_3440814_2 transferase activity, transferring glycosyl groups K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009104 593.0
BYD1_k127_3440814_3 - Amino acid transport and metabolism K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 421.0
BYD1_k127_3440814_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000004304 259.0
BYD1_k127_3440814_5 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000003262 261.0
BYD1_k127_3440814_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001343 236.0
BYD1_k127_3440814_7 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000002714 188.0
BYD1_k127_3440814_8 CheR methyltransferase, SAM binding domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.0001278 45.0
BYD1_k127_3443850_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1226.0
BYD1_k127_3443850_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 480.0
BYD1_k127_3443850_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000002285 191.0
BYD1_k127_3443850_11 - - - - 0.00000000003637 69.0
BYD1_k127_3443850_12 PFAM Peptidoglycan-binding domain 1 protein K08305 - - 0.000000009253 64.0
BYD1_k127_3443850_13 Ankyrin repeat - - - 0.00002358 49.0
BYD1_k127_3443850_2 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 410.0
BYD1_k127_3443850_3 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 415.0
BYD1_k127_3443850_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 381.0
BYD1_k127_3443850_5 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 383.0
BYD1_k127_3443850_6 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 362.0
BYD1_k127_3443850_7 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007913 354.0
BYD1_k127_3443850_8 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 318.0
BYD1_k127_3443850_9 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000001856 241.0
BYD1_k127_34566_0 Acyl-CoA dehydrogenase N terminal K20035 - - 2.153e-238 752.0
BYD1_k127_34566_1 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009368 578.0
BYD1_k127_34566_2 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 516.0
BYD1_k127_34566_3 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005847 432.0
BYD1_k127_34566_4 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000002926 206.0
BYD1_k127_34566_5 membrane - - - 0.00000000000000000000000000000000000000000838 156.0
BYD1_k127_3460936_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 7.653e-223 710.0
BYD1_k127_3460936_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 5.837e-216 700.0
BYD1_k127_3460936_10 TonB-dependent Receptor Plug K02014 - - 0.00000000000000000000000000000000000000009053 155.0
BYD1_k127_3460936_11 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000004037 120.0
BYD1_k127_3460936_12 - - - - 0.000000001756 60.0
BYD1_k127_3460936_2 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 474.0
BYD1_k127_3460936_3 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 438.0
BYD1_k127_3460936_4 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008574 329.0
BYD1_k127_3460936_5 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003339 279.0
BYD1_k127_3460936_6 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001209 267.0
BYD1_k127_3460936_7 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009562 225.0
BYD1_k127_3460936_8 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000051 190.0
BYD1_k127_3460936_9 cell division protein - - - 0.000000000000000000000000000000000000000001058 165.0
BYD1_k127_346097_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 1.335e-296 940.0
BYD1_k127_346097_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 4.865e-203 642.0
BYD1_k127_346097_2 Extracellular liganD-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000591 580.0
BYD1_k127_346097_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 447.0
BYD1_k127_346097_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007414 439.0
BYD1_k127_346097_5 citrate synthase K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 311.0
BYD1_k127_346097_6 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002533 266.0
BYD1_k127_3462740_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1067.0
BYD1_k127_3462740_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.122e-275 863.0
BYD1_k127_3462740_10 PFAM Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000002549 147.0
BYD1_k127_3462740_11 Fatty acid hydroxylase superfamily - - - 0.00000000000000000000000002946 109.0
BYD1_k127_3462740_12 Belongs to the 'phage' integrase family - - - 0.00000000001141 65.0
BYD1_k127_3462740_2 Adenylate cyclase K01768 - 4.6.1.1 7.833e-227 715.0
BYD1_k127_3462740_3 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 508.0
BYD1_k127_3462740_4 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 462.0
BYD1_k127_3462740_5 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 337.0
BYD1_k127_3462740_6 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 315.0
BYD1_k127_3462740_7 UPF0761 membrane protein K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 292.0
BYD1_k127_3462740_8 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004096 279.0
BYD1_k127_3462740_9 Predicted membrane protein (DUF2069) - - - 0.000000000000000000000000000000000004055 140.0
BYD1_k127_3471885_0 PFAM FAD dependent oxidoreductase - - - 1.272e-202 642.0
BYD1_k127_3471885_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 534.0
BYD1_k127_3471885_2 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 475.0
BYD1_k127_3471885_3 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 459.0
BYD1_k127_3471885_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 463.0
BYD1_k127_3471885_5 2-nitropropane dioxygenase K00459 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007623,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0012505,GO:0016192,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034404,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0042278,GO:0042451,GO:0042455,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046903,GO:0048511,GO:0050896,GO:0051179,GO:0051234,GO:0055086,GO:0055114,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097708,GO:0099503,GO:0101002,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1904813 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 317.0
BYD1_k127_3471885_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003078 250.0
BYD1_k127_3471885_7 Cyclase dehydrase - - - 0.00000000000000000000000000001045 121.0
BYD1_k127_3471885_8 membrane transporter protein K07090 - - 0.00000000000000197 80.0
BYD1_k127_3484427_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 625.0
BYD1_k127_3484427_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 567.0
BYD1_k127_3484427_10 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.00000000000000000000000000000000000000000001188 174.0
BYD1_k127_3484427_2 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005296 581.0
BYD1_k127_3484427_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 544.0
BYD1_k127_3484427_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 502.0
BYD1_k127_3484427_5 Aminotransferase class I and II K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 345.0
BYD1_k127_3484427_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 330.0
BYD1_k127_3484427_7 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001774 268.0
BYD1_k127_3484427_8 peptidase - - - 0.000000000000000000000000000000000000000000000000000000003739 209.0
BYD1_k127_3484427_9 beta-keto acid cleavage enzyme - - - 0.00000000000000000000000000000000000000000000775 166.0
BYD1_k127_3494889_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 383.0
BYD1_k127_3494889_1 regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000005322 236.0
BYD1_k127_3494889_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000001169 215.0
BYD1_k127_3494889_3 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000003103 197.0
BYD1_k127_3494889_4 ligase activity - - - 0.0000000000000000000000000000000000000000000000008616 196.0
BYD1_k127_3495539_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 2.744e-255 805.0
BYD1_k127_3495539_1 Periplasmic binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 586.0
BYD1_k127_3495539_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 544.0
BYD1_k127_3495539_3 AMP-binding enzyme C-terminal domain K00666,K20034 - 6.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 430.0
BYD1_k127_3495539_4 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 421.0
BYD1_k127_3495539_5 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 399.0
BYD1_k127_3495539_6 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 365.0
BYD1_k127_3495539_7 Branched-chain amino acid ATP-binding cassette transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 351.0
BYD1_k127_3495539_8 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008261 330.0
BYD1_k127_3495539_9 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 315.0
BYD1_k127_3501396_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.787e-280 870.0
BYD1_k127_3501396_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005175 559.0
BYD1_k127_3501396_2 DAHP synthetase I family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 460.0
BYD1_k127_3501396_3 HpcH/HpaI aldolase/citrate lyase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003203 269.0
BYD1_k127_3501396_4 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001958 257.0
BYD1_k127_3501396_5 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000000173 119.0
BYD1_k127_3536109_0 Mg chelatase subunit ChlI K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 614.0
BYD1_k127_3536109_1 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 469.0
BYD1_k127_3536109_10 Membrane fusogenic activity K09806 - - 0.00000000000000002147 84.0
BYD1_k127_3536109_2 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 451.0
BYD1_k127_3536109_3 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 342.0
BYD1_k127_3536109_4 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000882 261.0
BYD1_k127_3536109_5 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007706 260.0
BYD1_k127_3536109_6 Histidine triad (Hit) protein K02503 - - 0.0000000000000000000000000000000000000000000008091 178.0
BYD1_k127_3536109_7 Protein of unknown function (DUF3426) - - - 0.00000000000000000000000000000000000000002823 162.0
BYD1_k127_3536109_8 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000001199 145.0
BYD1_k127_3536109_9 membrane K06077 - - 0.00000000000000000000000000000000000004176 153.0
BYD1_k127_360728_0 Hydantoinase B/oxoprolinase K01469 - 3.5.2.9 0.0 1724.0
BYD1_k127_360728_1 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1620.0
BYD1_k127_360728_10 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 334.0
BYD1_k127_360728_11 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 325.0
BYD1_k127_360728_12 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002332 309.0
BYD1_k127_360728_13 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 308.0
BYD1_k127_360728_14 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 285.0
BYD1_k127_360728_15 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001045 245.0
BYD1_k127_360728_16 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001282 247.0
BYD1_k127_360728_17 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000007207 219.0
BYD1_k127_360728_18 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000001474 222.0
BYD1_k127_360728_19 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000002432 205.0
BYD1_k127_360728_2 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 551.0
BYD1_k127_360728_20 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000008342 192.0
BYD1_k127_360728_21 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000003623 178.0
BYD1_k127_360728_22 transport system small permease component - - - 0.000000000000000000000000000000000000000000000006166 179.0
BYD1_k127_360728_23 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000001743 164.0
BYD1_k127_360728_24 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000335 146.0
BYD1_k127_360728_25 FKBP-type peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000001827 132.0
BYD1_k127_360728_26 - - - - 0.00000000000000000000005446 109.0
BYD1_k127_360728_27 ATP-grasp - - - 0.0000000000000000000002597 113.0
BYD1_k127_360728_28 Electron transfer DM13 - - - 0.00000000002808 64.0
BYD1_k127_360728_29 PFAM Sel1 domain protein repeat-containing protein K07126 - - 0.00013 51.0
BYD1_k127_360728_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 480.0
BYD1_k127_360728_4 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 447.0
BYD1_k127_360728_5 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 437.0
BYD1_k127_360728_6 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 398.0
BYD1_k127_360728_7 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 380.0
BYD1_k127_360728_8 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004751 377.0
BYD1_k127_360728_9 (Lipo)protein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 370.0
BYD1_k127_3673910_0 FAD linked oxidase domain protein K06911 - - 0.0 1148.0
BYD1_k127_3673910_1 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 338.0
BYD1_k127_3673910_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001427 288.0
BYD1_k127_3673910_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000746 285.0
BYD1_k127_3673910_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000003884 226.0
BYD1_k127_3673910_5 - - - - 0.00000000000000004121 86.0
BYD1_k127_3683677_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1289.0
BYD1_k127_3683677_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 4.275e-197 622.0
BYD1_k127_3683677_10 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 429.0
BYD1_k127_3683677_11 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 435.0
BYD1_k127_3683677_12 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 409.0
BYD1_k127_3683677_13 ATPase (AAA K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 369.0
BYD1_k127_3683677_14 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 372.0
BYD1_k127_3683677_15 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 358.0
BYD1_k127_3683677_16 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 339.0
BYD1_k127_3683677_17 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 332.0
BYD1_k127_3683677_18 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 325.0
BYD1_k127_3683677_19 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 327.0
BYD1_k127_3683677_2 type II secretion system protein K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 604.0
BYD1_k127_3683677_20 Peptidase family M23 K08259 - 3.4.24.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 322.0
BYD1_k127_3683677_21 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002387 267.0
BYD1_k127_3683677_22 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000001118 241.0
BYD1_k127_3683677_23 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000004959 192.0
BYD1_k127_3683677_24 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000005118 190.0
BYD1_k127_3683677_25 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000003268 175.0
BYD1_k127_3683677_26 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000005326 149.0
BYD1_k127_3683677_27 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000001131 139.0
BYD1_k127_3683677_28 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000008162 134.0
BYD1_k127_3683677_29 Modulates RecA activity K03565 - - 0.0000000000000000000000000000731 122.0
BYD1_k127_3683677_3 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 585.0
BYD1_k127_3683677_30 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000001247 114.0
BYD1_k127_3683677_31 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000005091 80.0
BYD1_k127_3683677_32 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000002572 81.0
BYD1_k127_3683677_33 Protein of unknown function (DUF721) - - - 0.000000000001748 73.0
BYD1_k127_3683677_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 597.0
BYD1_k127_3683677_5 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 547.0
BYD1_k127_3683677_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 484.0
BYD1_k127_3683677_7 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 474.0
BYD1_k127_3683677_8 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 462.0
BYD1_k127_3683677_9 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 457.0
BYD1_k127_3709907_0 COG1538 Outer membrane protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 426.0
BYD1_k127_3709907_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 383.0
BYD1_k127_3709907_2 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 312.0
BYD1_k127_3709907_3 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000009784 247.0
BYD1_k127_3709907_4 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000006412 134.0
BYD1_k127_3709907_5 PFAM Rhodanese domain protein - - - 0.0000000000000000000000000007894 114.0
BYD1_k127_3741078_0 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 503.0
BYD1_k127_3741078_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 430.0
BYD1_k127_3741078_2 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 427.0
BYD1_k127_3741078_3 3'-5' exonuclease K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002027 295.0
BYD1_k127_3741078_4 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000004394 187.0
BYD1_k127_380624_0 type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 594.0
BYD1_k127_380624_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 357.0
BYD1_k127_380624_2 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 329.0
BYD1_k127_380624_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005688 280.0
BYD1_k127_380624_4 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000003542 174.0
BYD1_k127_380624_5 RDD family - - - 0.000000000000000000000000000002297 124.0
BYD1_k127_380624_6 META domain - - - 0.00000004681 63.0
BYD1_k127_3853510_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 459.0
BYD1_k127_3853510_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001192 275.0
BYD1_k127_3853510_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000307 85.0
BYD1_k127_3853510_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000878 56.0
BYD1_k127_3927100_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1024.0
BYD1_k127_3927100_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.79e-289 895.0
BYD1_k127_3927100_2 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000002574 273.0
BYD1_k127_3927100_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000004406 132.0
BYD1_k127_3927100_4 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000005088 128.0
BYD1_k127_3927100_5 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.00000000000000003369 80.0
BYD1_k127_3940308_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1070.0
BYD1_k127_3940308_1 Exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 581.0
BYD1_k127_3940308_2 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 400.0
BYD1_k127_3940308_3 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000008448 160.0
BYD1_k127_3985100_0 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 2.501e-203 651.0
BYD1_k127_3985100_1 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 438.0
BYD1_k127_3985100_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001795 242.0
BYD1_k127_3985100_3 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000000007097 199.0
BYD1_k127_3985100_4 - - - - 0.000000000000000000000000000000000000000000001261 181.0
BYD1_k127_3985100_6 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000001032 160.0
BYD1_k127_3985100_7 general secretion pathway protein - - - 0.00000000000000000000006007 115.0
BYD1_k127_3985100_8 - - - - 0.00000000000000000004488 100.0
BYD1_k127_3995799_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 3.752e-247 776.0
BYD1_k127_3995799_1 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 503.0
BYD1_k127_3995799_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 327.0
BYD1_k127_3995799_3 helix_turn_helix, Lux Regulon K14979 - - 0.00000000000000000000000000000000000000000007966 164.0
BYD1_k127_3995799_4 - - - - 0.0000000000000000006906 89.0
BYD1_k127_3995799_5 Two component transcriptional regulator, LuxR family - - - 0.000000000001309 72.0
BYD1_k127_3995799_6 - - - - 0.0000000004778 65.0
BYD1_k127_3995799_7 Transcriptional regulator - - - 0.00003086 51.0
BYD1_k127_401519_0 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007249 531.0
BYD1_k127_401519_1 Belongs to the LDH MDH superfamily. LDH family K00016 - 1.1.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000386 309.0
BYD1_k127_401519_10 Universal stress protein - - - 0.000000000001398 71.0
BYD1_k127_401519_11 Universal stress protein - - - 0.000000003467 63.0
BYD1_k127_401519_12 Heavy metal translocating P-type atpase K17686 - 3.6.3.54 0.000000004202 59.0
BYD1_k127_401519_14 - - - - 0.0001007 50.0
BYD1_k127_401519_15 Belongs to the carbohydrate kinase PfkB family K16370 - 2.7.1.11 0.0003058 49.0
BYD1_k127_401519_2 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000000006925 229.0
BYD1_k127_401519_3 hydrolase family 65, central catalytic K01194,K01838,K04844,K05342 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0016787,GO:0030312,GO:0044464,GO:0071944 2.4.1.64,3.2.1.28,5.4.2.6 0.0000000000000000000000000000000000000000000000000000000000000004504 229.0
BYD1_k127_401519_4 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000002008 115.0
BYD1_k127_401519_5 pfkB family carbohydrate kinase K16370 - 2.7.1.11 0.000000000000000000000001469 108.0
BYD1_k127_401519_6 pfkB family carbohydrate kinase K16370 - 2.7.1.11 0.000000000000000000000003784 109.0
BYD1_k127_401519_7 AMP binding - - - 0.000000000000000000003211 106.0
BYD1_k127_401519_8 Trypsin K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006457,GO:0006508,GO:0006515,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0009987,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030163,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051603,GO:0061077,GO:0070011,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.107 0.000000000000000000003927 96.0
BYD1_k127_401519_9 Belongs to the carbohydrate kinase PfkB family K16370 - 2.7.1.11 0.000000000000000001862 90.0
BYD1_k127_4026044_0 TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 325.0
BYD1_k127_4026044_1 short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002182 240.0
BYD1_k127_4026044_2 transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000004503 200.0
BYD1_k127_4026044_3 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000002146 150.0
BYD1_k127_4027268_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214,K02438 - 3.2.1.196,3.2.1.68 0.0 1088.0
BYD1_k127_4027268_1 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005747 409.0
BYD1_k127_4027268_2 Transcriptional regulator K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 379.0
BYD1_k127_4027268_3 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000004355 169.0
BYD1_k127_4027268_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000008439 138.0
BYD1_k127_4027268_5 AI-2E family transporter - - - 0.00002032 48.0
BYD1_k127_4053079_0 PrkA AAA domain K07180 - - 2.069e-310 961.0
BYD1_k127_4053079_1 BT1 family - - - 2.002e-211 668.0
BYD1_k127_4053079_10 abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 356.0
BYD1_k127_4053079_11 MarR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 342.0
BYD1_k127_4053079_12 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 338.0
BYD1_k127_4053079_13 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 308.0
BYD1_k127_4053079_14 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 299.0
BYD1_k127_4053079_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007435 263.0
BYD1_k127_4053079_16 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000002672 188.0
BYD1_k127_4053079_17 MAPEG family - - - 0.00000000000000000000000000000000000000001105 156.0
BYD1_k127_4053079_18 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000008966 161.0
BYD1_k127_4053079_2 SpoVR like protein K06415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004231 593.0
BYD1_k127_4053079_20 - - - - 0.000000000004383 74.0
BYD1_k127_4053079_3 3-keto-5-aminohexanoate cleavage protein K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 505.0
BYD1_k127_4053079_4 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 503.0
BYD1_k127_4053079_5 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 462.0
BYD1_k127_4053079_6 PFAM ABC-1 domain protein K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 421.0
BYD1_k127_4053079_7 MltA-interacting protein MipA K07274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 419.0
BYD1_k127_4053079_8 Protein of unknown function (DUF444) K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005712 434.0
BYD1_k127_4053079_9 DNA primase, small subunit K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 399.0
BYD1_k127_4067990_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1094.0
BYD1_k127_4067990_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 1.124e-198 626.0
BYD1_k127_4067990_10 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001286 255.0
BYD1_k127_4067990_11 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000002583 232.0
BYD1_k127_4067990_12 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000005153 222.0
BYD1_k127_4067990_13 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000001585 210.0
BYD1_k127_4067990_14 Belongs to the UPF0250 family K09158 - - 0.00000000000000000000000000000197 123.0
BYD1_k127_4067990_15 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000997 107.0
BYD1_k127_4067990_16 Protein of unknown function (DUF2782) - - - 0.0000000000000000002608 91.0
BYD1_k127_4067990_17 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.00000000001345 66.0
BYD1_k127_4067990_2 dihydroorotase K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 560.0
BYD1_k127_4067990_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002199 507.0
BYD1_k127_4067990_4 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 474.0
BYD1_k127_4067990_5 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008617 476.0
BYD1_k127_4067990_6 transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 418.0
BYD1_k127_4067990_7 Amino-transferase class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 351.0
BYD1_k127_4067990_8 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 317.0
BYD1_k127_4067990_9 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001245 258.0
BYD1_k127_4091876_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1035.0
BYD1_k127_4091876_1 Participates in both transcription termination and antitermination K02600 - - 3.699e-223 701.0
BYD1_k127_4091876_10 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000003323 156.0
BYD1_k127_4091876_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 6.182e-212 662.0
BYD1_k127_4091876_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007106 352.0
BYD1_k127_4091876_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 325.0
BYD1_k127_4091876_5 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 305.0
BYD1_k127_4091876_6 S4 RNA-binding domain K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001146 283.0
BYD1_k127_4091876_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001586 258.0
BYD1_k127_4091876_8 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009111 263.0
BYD1_k127_4091876_9 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000008507 235.0
BYD1_k127_4164113_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 4.116e-290 903.0
BYD1_k127_4164113_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.055e-209 658.0
BYD1_k127_4164113_10 ferredoxin, 2Fe-2S type K04755 - - 0.00000000000000000000000000000000000000000000002557 171.0
BYD1_k127_4164113_11 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components - - - 0.000000000000000000000000000000000000001309 148.0
BYD1_k127_4164113_12 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000177 128.0
BYD1_k127_4164113_13 FeS assembly protein IscX - - - 0.0000000000000000000000007581 109.0
BYD1_k127_4164113_2 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 471.0
BYD1_k127_4164113_3 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 463.0
BYD1_k127_4164113_4 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 409.0
BYD1_k127_4164113_5 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 299.0
BYD1_k127_4164113_6 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002508 239.0
BYD1_k127_4164113_7 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000001492 226.0
BYD1_k127_4164113_8 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000008258 186.0
BYD1_k127_4164113_9 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000000004641 181.0
BYD1_k127_4168287_0 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 460.0
BYD1_k127_4168287_1 Adenylate cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 331.0
BYD1_k127_4168287_2 Protein of unknown function (DUF3485) - - - 0.000000000000000000000000000000000000000000000000002817 201.0
BYD1_k127_4168287_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000243 181.0
BYD1_k127_4168287_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000002998 181.0
BYD1_k127_4192480_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain, Biotin carboxylase C-terminal domain, Carbamoyl-phosphate synthase L chain, N-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 9.144e-201 629.0
BYD1_k127_4192480_1 Mur ligase family, catalytic domain K02558 - 6.3.2.45 1.354e-196 625.0
BYD1_k127_4192480_10 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000007281 250.0
BYD1_k127_4192480_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000007124 218.0
BYD1_k127_4192480_12 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000004505 211.0
BYD1_k127_4192480_13 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000000001929 196.0
BYD1_k127_4192480_14 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000002033 189.0
BYD1_k127_4192480_15 - - - - 0.0000000000000000000000000000000000000000000004271 173.0
BYD1_k127_4192480_16 Thioredoxin-like - - - 0.000000000000000000000000000000000942 136.0
BYD1_k127_4192480_17 Rubredoxin - - - 0.000000000000000000000000000000007821 127.0
BYD1_k127_4192480_18 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000005217 127.0
BYD1_k127_4192480_2 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 611.0
BYD1_k127_4192480_3 RNB K01147 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 608.0
BYD1_k127_4192480_4 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 567.0
BYD1_k127_4192480_5 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 318.0
BYD1_k127_4192480_6 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 291.0
BYD1_k127_4192480_7 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 293.0
BYD1_k127_4192480_8 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 292.0
BYD1_k127_4192480_9 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000524 268.0
BYD1_k127_4257556_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 1.425e-233 749.0
BYD1_k127_4257556_1 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 288.0
BYD1_k127_4257556_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000006815 258.0
BYD1_k127_4257556_3 - - - - 0.00000000000000000000000000384 115.0
BYD1_k127_4257556_4 DNA recombination protein, rmuC K09760 - - 0.0000000000000001468 83.0
BYD1_k127_4257556_5 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.0000000000001936 78.0
BYD1_k127_4337707_0 Tripartite tricarboxylate transporter TctA family K07793 - - 3.742e-200 635.0
BYD1_k127_4337707_1 PFAM conserved K07795 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 361.0
BYD1_k127_4337707_2 PFAM amine oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004007 251.0
BYD1_k127_4337707_3 Tripartite tricarboxylate transporter TctB family K07794 - - 0.0000000000000000000000000001376 120.0
BYD1_k127_4337707_4 ATPases associated with a variety of cellular activities K01990,K11050 - - 0.000003578 49.0
BYD1_k127_43612_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 4.908e-195 620.0
BYD1_k127_43612_1 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 291.0
BYD1_k127_43612_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002541 280.0
BYD1_k127_43612_3 COG2513 PEP phosphonomutase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000302 241.0
BYD1_k127_4410432_0 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 559.0
BYD1_k127_4410432_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 354.0
BYD1_k127_4410432_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 362.0
BYD1_k127_4410432_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000002233 190.0
BYD1_k127_4410432_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000002671 78.0
BYD1_k127_4410432_5 response regulator K07715 - - 0.00000008825 55.0
BYD1_k127_4461418_0 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 524.0
BYD1_k127_4461418_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 439.0
BYD1_k127_4461418_2 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007122 271.0
BYD1_k127_4461418_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001866 263.0
BYD1_k127_4461418_4 PFAM amidohydrolase K01464,K01466 - 3.5.2.2,3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000002583 240.0
BYD1_k127_4461418_5 Tellurite resistance protein TerB - - - 0.00000000000000000004955 95.0
BYD1_k127_4466878_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 6.86e-237 739.0
BYD1_k127_4466878_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 373.0
BYD1_k127_4466878_2 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000001613 177.0
BYD1_k127_4466878_3 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000004276 107.0
BYD1_k127_4466878_4 NADPH-dependent FMN reductase K19784 - - 0.000000000000004912 77.0
BYD1_k127_4466878_5 Flavodoxin-like fold K19784 - - 0.00000009747 57.0
BYD1_k127_4484650_0 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 416.0
BYD1_k127_4484650_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 321.0
BYD1_k127_4484650_2 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 307.0
BYD1_k127_4491061_0 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.000000000000000000000000000000000000000000000000000001941 202.0
BYD1_k127_4491061_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.00000000000000000000000000000000000000000000000000004319 189.0
BYD1_k127_4491061_2 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000008954 132.0
BYD1_k127_4491061_3 Thioredoxin-like domain - - - 0.000000005303 58.0
BYD1_k127_4491061_4 Domain of unknown function (DUF3330) - - - 0.0000002273 58.0
BYD1_k127_4498202_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.661e-235 733.0
BYD1_k127_4498202_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 483.0
BYD1_k127_4498202_10 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000006908 72.0
BYD1_k127_4498202_11 Ribosomal protein L30 K02907 - - 0.0000000000001136 82.0
BYD1_k127_4498202_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 327.0
BYD1_k127_4498202_3 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002137 279.0
BYD1_k127_4498202_4 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004138 261.0
BYD1_k127_4498202_5 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000003014 228.0
BYD1_k127_4498202_6 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000009415 194.0
BYD1_k127_4498202_7 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000002018 183.0
BYD1_k127_4498202_8 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000003929 143.0
BYD1_k127_4498202_9 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000002111 134.0
BYD1_k127_4518774_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1356.0
BYD1_k127_4518774_1 Carbamoyltransferase K00612 - - 4.433e-301 933.0
BYD1_k127_4518774_10 prepilin-type N-terminal cleavage methylation K02456 - - 0.0000000000000000000000000000000000000000000000000000002831 196.0
BYD1_k127_4518774_11 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000003362 206.0
BYD1_k127_4518774_12 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000000000002674 185.0
BYD1_k127_4518774_13 WbqC-like protein family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000006011 194.0
BYD1_k127_4518774_14 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000003559 157.0
BYD1_k127_4518774_15 - - - - 0.0000000000000000000000000000000004295 137.0
BYD1_k127_4518774_16 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000009216 131.0
BYD1_k127_4518774_17 type II secretion system protein G K02456 - - 0.0000000000000000000000000000471 136.0
BYD1_k127_4518774_18 - - - - 0.0000000000000000000000000001221 126.0
BYD1_k127_4518774_19 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000001339 123.0
BYD1_k127_4518774_2 Secretin and TonB N terminus short domain K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 616.0
BYD1_k127_4518774_20 lipolytic protein G-D-S-L family - - - 0.000000000000000000000006505 115.0
BYD1_k127_4518774_21 Uncharacterized protein conserved in bacteria (DUF2332) - - - 0.00000000000000000000005286 111.0
BYD1_k127_4518774_22 - - - - 0.00000000000000001473 89.0
BYD1_k127_4518774_23 carbon utilization - - - 0.0000000000000001063 91.0
BYD1_k127_4518774_24 - - - - 0.000000000000001111 89.0
BYD1_k127_4518774_25 - - - - 0.0000000000001558 78.0
BYD1_k127_4518774_3 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 601.0
BYD1_k127_4518774_4 transferase activity, transferring glycosyl groups K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007578 422.0
BYD1_k127_4518774_5 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 411.0
BYD1_k127_4518774_6 Type II secretion system K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 349.0
BYD1_k127_4518774_7 ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 327.0
BYD1_k127_4518774_8 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 293.0
BYD1_k127_4518774_9 Bacterial transferase hexapeptide (six repeats) K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000004437 209.0
BYD1_k127_4522222_0 Periplasmic binding protein domain K01999 - - 1.039e-213 669.0
BYD1_k127_4522222_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 7.215e-201 647.0
BYD1_k127_4522222_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006326 423.0
BYD1_k127_4522222_3 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 395.0
BYD1_k127_4522222_4 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 360.0
BYD1_k127_4522222_5 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 317.0
BYD1_k127_4522222_6 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000008712 162.0
BYD1_k127_4522222_7 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0002535 46.0
BYD1_k127_4655580_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 2.012e-232 727.0
BYD1_k127_4655580_1 Aminotransferase K14261 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 542.0
BYD1_k127_4655580_2 hydrolase activity, acting on ester bonds K01561 - 3.8.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 366.0
BYD1_k127_4655580_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 299.0
BYD1_k127_4655580_4 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000000002654 235.0
BYD1_k127_4655580_5 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000004587 222.0
BYD1_k127_4655580_6 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000001506 141.0
BYD1_k127_4711574_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1044.0
BYD1_k127_4711574_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 1.565e-225 707.0
BYD1_k127_4711574_10 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 311.0
BYD1_k127_4711574_11 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 286.0
BYD1_k127_4711574_12 Transposase IS200 like K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008019 270.0
BYD1_k127_4711574_13 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005417 271.0
BYD1_k127_4711574_14 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002379 276.0
BYD1_k127_4711574_15 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000000000000000000000000000000000007662 190.0
BYD1_k127_4711574_16 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000000002484 160.0
BYD1_k127_4711574_17 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.0000000000000000000000001275 113.0
BYD1_k127_4711574_18 LuxR family transcriptional regulator - - - 0.00000000000000003004 89.0
BYD1_k127_4711574_19 Transmembrane family 220, helix - - - 0.0000000000162 69.0
BYD1_k127_4711574_2 TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004564 591.0
BYD1_k127_4711574_20 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000003739 59.0
BYD1_k127_4711574_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004321 557.0
BYD1_k127_4711574_4 TatD related DNase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 516.0
BYD1_k127_4711574_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K19969 - 4.2.3.152,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 477.0
BYD1_k127_4711574_6 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 423.0
BYD1_k127_4711574_7 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 328.0
BYD1_k127_4711574_8 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 322.0
BYD1_k127_4711574_9 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 315.0
BYD1_k127_4729399_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 3.202e-305 954.0
BYD1_k127_4729399_1 Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 331.0
BYD1_k127_4729399_2 Copper binding proteins, plastocyanin/azurin family - - - 0.000000000000000000000000000000000000000006134 158.0
BYD1_k127_4729399_3 Copper binding periplasmic protein CusF - - - 0.000000000000000000000000005858 113.0
BYD1_k127_4752446_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 7.253e-271 839.0
BYD1_k127_4752446_1 Histidine kinase A domain protein - - - 2.585e-202 638.0
BYD1_k127_4752446_2 - - - - 0.000000000000000000000000000000000000000000000000001139 184.0
BYD1_k127_4752446_3 - - - - 0.0000000000000002646 80.0
BYD1_k127_4778126_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 437.0
BYD1_k127_4778126_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 295.0
BYD1_k127_4778126_2 mandelate racemase muconate lactonizing K20023 - 4.2.1.156,4.2.1.42 0.00000000000000000000000000000000000000000000000000000000000003237 228.0
BYD1_k127_4778126_3 PFAM Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000008931 52.0
BYD1_k127_4799563_0 Putative diguanylate phosphodiesterase - - - 5.575e-219 712.0
BYD1_k127_4799563_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004683 243.0
BYD1_k127_4799563_2 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000001786 229.0
BYD1_k127_4799563_3 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.0000000000000000000000000000000000000000000000002679 184.0
BYD1_k127_4799563_4 COG0457 FOG TPR repeat - - - 0.0000000000000000000002465 105.0
BYD1_k127_4799563_5 - - - - 0.0002481 49.0
BYD1_k127_4844804_0 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 402.0
BYD1_k127_4844804_1 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 380.0
BYD1_k127_4844804_2 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 342.0
BYD1_k127_4844804_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000158 290.0
BYD1_k127_4844804_4 ABC transporter K01995 - - 0.0000000000000000000000000000000002287 150.0
BYD1_k127_4898707_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 509.0
BYD1_k127_4898707_1 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 404.0
BYD1_k127_4901008_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 7.138e-220 709.0
BYD1_k127_4901008_1 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 589.0
BYD1_k127_4901008_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 567.0
BYD1_k127_4901008_3 Citrate synthase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 363.0
BYD1_k127_4901008_4 phosphate acetyltransferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 312.0
BYD1_k127_4901008_5 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000001014 186.0
BYD1_k127_4901008_6 Universal stress protein family - - - 0.0000000000000000000000000000000000000006344 155.0
BYD1_k127_4918284_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 599.0
BYD1_k127_4918284_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 449.0
BYD1_k127_4918284_2 membrane-bound lytic murein transglycosylase K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 408.0
BYD1_k127_4918284_3 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 340.0
BYD1_k127_4918284_4 Anthranilate synthase K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004567 281.0
BYD1_k127_4918284_5 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000000001429 192.0
BYD1_k127_4918284_6 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000272 193.0
BYD1_k127_4918284_7 Ubiquinone biosynthesis - - - 0.000000000000000000001521 97.0
BYD1_k127_4950499_0 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 413.0
BYD1_k127_4950499_1 Vitamin k epoxide reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000846 254.0
BYD1_k127_4950499_2 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.000000000000000000000000000000000000000000000009907 173.0
BYD1_k127_4950499_3 KR domain K00023,K00059 - 1.1.1.100,1.1.1.36 0.0000000000000000005288 91.0
BYD1_k127_4950499_4 Iron-sulfur cluster assembly protein - - - 0.00000000000000001248 83.0
BYD1_k127_501322_0 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 535.0
BYD1_k127_501322_1 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003192 535.0
BYD1_k127_501322_10 PFAM Ethyl tert-butyl ether degradation EthD - - - 0.000458 48.0
BYD1_k127_501322_2 leucyl aminopeptidase, aminopeptidase T K18028 - 1.13.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 436.0
BYD1_k127_501322_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 351.0
BYD1_k127_501322_4 Alpha beta hydrolase K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 309.0
BYD1_k127_501322_5 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 305.0
BYD1_k127_501322_6 carboxylic ester hydrolase activity K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000004638 220.0
BYD1_k127_501322_7 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000000000001153 138.0
BYD1_k127_501322_8 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000000003724 111.0
BYD1_k127_501322_9 - - - - 0.000000000003997 70.0
BYD1_k127_502346_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 447.0
BYD1_k127_502346_1 Putative serine dehydratase domain K18425 - 4.1.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 410.0
BYD1_k127_502346_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 366.0
BYD1_k127_502346_3 PFAM multi antimicrobial extrusion protein MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 358.0
BYD1_k127_502346_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001721 261.0
BYD1_k127_502346_5 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000004629 173.0
BYD1_k127_502346_6 TIGRFAM O-acetylhomoserine O-acetylserine sulfhydrylase K01740 - 2.5.1.49 0.0000000000000000000000000000766 116.0
BYD1_k127_502346_7 VanZ like family - - - 0.000000000000000000000003413 111.0
BYD1_k127_5043144_0 ABC transporter transmembrane region K02021 - - 1.745e-269 854.0
BYD1_k127_5043144_1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 357.0
BYD1_k127_5043144_2 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000009386 147.0
BYD1_k127_5043144_3 Protein of unknown function (DUF445) - - - 0.000000000000000009698 90.0
BYD1_k127_5043144_4 Serine aminopeptidase, S33 - - - 0.000009069 47.0
BYD1_k127_5067084_0 PFAM glycoside hydrolase 15-related - - - 1.405e-253 798.0
BYD1_k127_5067084_1 Phospholipase D Active site motif K01115 - 3.1.4.4 1.435e-249 790.0
BYD1_k127_5067084_10 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 417.0
BYD1_k127_5067084_11 Oxidoreductase family, C-terminal alpha/beta domain K18067 - 1.3.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 417.0
BYD1_k127_5067084_12 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 384.0
BYD1_k127_5067084_13 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 392.0
BYD1_k127_5067084_14 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 398.0
BYD1_k127_5067084_15 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 366.0
BYD1_k127_5067084_16 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 351.0
BYD1_k127_5067084_17 response regulator K02483,K07661,K18073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 335.0
BYD1_k127_5067084_18 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 332.0
BYD1_k127_5067084_19 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 318.0
BYD1_k127_5067084_2 ABC transporter - - - 3.586e-214 681.0
BYD1_k127_5067084_20 Catechol dioxygenase N terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 315.0
BYD1_k127_5067084_21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 310.0
BYD1_k127_5067084_22 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 296.0
BYD1_k127_5067084_23 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 294.0
BYD1_k127_5067084_24 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 310.0
BYD1_k127_5067084_25 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005591 280.0
BYD1_k127_5067084_26 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009195 280.0
BYD1_k127_5067084_27 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001358 264.0
BYD1_k127_5067084_28 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008444 265.0
BYD1_k127_5067084_29 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000734 226.0
BYD1_k127_5067084_3 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 1.243e-194 614.0
BYD1_k127_5067084_30 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000003878 217.0
BYD1_k127_5067084_31 intermembrane lipid transfer K06192 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0009987,GO:0010876,GO:0016020,GO:0016021,GO:0016043,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071840,GO:0071944,GO:0120009 - 0.0000000000000000000000000000000000000000000000000000000003135 213.0
BYD1_k127_5067084_32 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000004911 199.0
BYD1_k127_5067084_33 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000001323 190.0
BYD1_k127_5067084_34 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000004643 174.0
BYD1_k127_5067084_35 Pfam:TPM - - - 0.0000000000000000000000000000000000000000005349 169.0
BYD1_k127_5067084_36 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976 - - 0.000000000000000000000000000000000000000919 153.0
BYD1_k127_5067084_37 paraquat-inducible protein A K03808 - - 0.000000000000000000000000000000000000004833 154.0
BYD1_k127_5067084_38 Cupin domain - - - 0.00000000000000000000000000000000006934 151.0
BYD1_k127_5067084_39 Thioesterase superfamily - - - 0.0000000000000000000000000000000004247 134.0
BYD1_k127_5067084_4 Allophanate hydrolase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 553.0
BYD1_k127_5067084_40 Cold shock protein K03704 - - 0.00000000000000000000000000000004888 125.0
BYD1_k127_5067084_41 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000002016 133.0
BYD1_k127_5067084_42 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000008723 116.0
BYD1_k127_5067084_43 Voltage-dependent anion channel K03304 - - 0.0000000000000000000002349 104.0
BYD1_k127_5067084_44 LTXXQ motif family protein - - - 0.00000000000000000009274 96.0
BYD1_k127_5067084_45 response regulator, receiver - - - 0.0000000000000008636 81.0
BYD1_k127_5067084_46 protein histidine kinase activity - - - 0.000000000004975 75.0
BYD1_k127_5067084_47 Glucose dehydrogenase C-terminus - - - 0.0000000005047 73.0
BYD1_k127_5067084_48 MltA-interacting protein MipA - - - 0.000004057 58.0
BYD1_k127_5067084_49 EF hand - - - 0.00001168 51.0
BYD1_k127_5067084_5 Glucose sorbosone K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 531.0
BYD1_k127_5067084_50 BON domain - - - 0.00005496 50.0
BYD1_k127_5067084_51 EF-hand, calcium binding motif - - - 0.0001307 48.0
BYD1_k127_5067084_6 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 520.0
BYD1_k127_5067084_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 506.0
BYD1_k127_5067084_8 4,5-dihydroxyphthalate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 467.0
BYD1_k127_5067084_9 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 479.0
BYD1_k127_5070435_0 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 516.0
BYD1_k127_5070435_1 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 481.0
BYD1_k127_5070435_2 Fatty acid hydroxylase - - - 0.000005261 52.0
BYD1_k127_5078347_0 Belongs to the TPP enzyme family K03852 - 2.3.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 595.0
BYD1_k127_5078347_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 335.0
BYD1_k127_5078347_2 Bacterial transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006074 250.0
BYD1_k127_5078347_3 short-chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009491 240.0
BYD1_k127_5078347_4 membrane transporter protein K07090 - - 0.000000000000000000000000000000000001268 153.0
BYD1_k127_5078347_5 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000006432 144.0
BYD1_k127_5078347_6 Conserved carboxylase domain K01571 - 4.1.1.3 0.0000000000000000000000000000006944 124.0
BYD1_k127_5078932_0 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 498.0
BYD1_k127_5078932_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 486.0
BYD1_k127_5078932_2 N-terminal TM domain of oligopeptide transport permease C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 437.0
BYD1_k127_5078932_3 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 420.0
BYD1_k127_51382_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 4.723e-255 802.0
BYD1_k127_51382_1 Isocitrate lyase K01637 - 4.1.3.1 2.239e-223 698.0
BYD1_k127_51382_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 7.248e-201 642.0
BYD1_k127_51382_3 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 471.0
BYD1_k127_51382_4 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002688 284.0
BYD1_k127_51382_5 rod shape-determining protein MreD K03571 - - 0.000000000000000000000000000000000000000003296 162.0
BYD1_k127_51382_6 DUF167 K09131 - - 0.0000003431 52.0
BYD1_k127_5141438_0 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 556.0
BYD1_k127_5141438_1 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 428.0
BYD1_k127_5141438_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000007275 225.0
BYD1_k127_5142892_0 Required for chromosome condensation and partitioning K03529 - - 1.5e-323 1028.0
BYD1_k127_5142892_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 5.754e-310 972.0
BYD1_k127_5142892_10 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 299.0
BYD1_k127_5142892_11 RNA cap guanine-N2 methyltransferase K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000002206 257.0
BYD1_k127_5142892_12 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000008202 249.0
BYD1_k127_5142892_13 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000003692 232.0
BYD1_k127_5142892_14 Psort location Cytoplasmic, score 9.97 K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000006033 224.0
BYD1_k127_5142892_15 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000001518 202.0
BYD1_k127_5142892_16 PFAM CHAD domain containing protein - - - 0.00000000000000000002082 102.0
BYD1_k127_5142892_17 - - - - 0.0000001097 58.0
BYD1_k127_5142892_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.144e-251 794.0
BYD1_k127_5142892_3 Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 515.0
BYD1_k127_5142892_4 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 512.0
BYD1_k127_5142892_5 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 474.0
BYD1_k127_5142892_6 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 415.0
BYD1_k127_5142892_7 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 410.0
BYD1_k127_5142892_8 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 397.0
BYD1_k127_5142892_9 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 341.0
BYD1_k127_5147249_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 7e-272 867.0
BYD1_k127_5147249_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006132 511.0
BYD1_k127_5147249_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005196 438.0
BYD1_k127_5147249_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000001606 87.0
BYD1_k127_5166623_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 6.876e-274 856.0
BYD1_k127_5166623_1 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 7.785e-269 834.0
BYD1_k127_5166623_10 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 463.0
BYD1_k127_5166623_11 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 448.0
BYD1_k127_5166623_12 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 430.0
BYD1_k127_5166623_13 amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 423.0
BYD1_k127_5166623_14 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000912 400.0
BYD1_k127_5166623_15 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 383.0
BYD1_k127_5166623_16 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006952 359.0
BYD1_k127_5166623_17 hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 332.0
BYD1_k127_5166623_18 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 319.0
BYD1_k127_5166623_19 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 304.0
BYD1_k127_5166623_2 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 2.695e-231 741.0
BYD1_k127_5166623_20 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001051 291.0
BYD1_k127_5166623_21 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000002147 229.0
BYD1_k127_5166623_22 OsmC-like protein - - - 0.0000000000000000000000000000000000000000002362 162.0
BYD1_k127_5166623_23 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000002578 162.0
BYD1_k127_5166623_24 transcriptional - - - 0.0000000000000000000000000000000000006272 145.0
BYD1_k127_5166623_25 thiolester hydrolase activity K17362 - - 0.000000000000000000000000000000006906 133.0
BYD1_k127_5166623_26 Fe-S protein K06938 - - 0.00000000000002274 78.0
BYD1_k127_5166623_27 Protein of unknown function (DUF2892) - - - 0.0007249 51.0
BYD1_k127_5166623_3 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 1.254e-206 651.0
BYD1_k127_5166623_4 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 2.091e-196 618.0
BYD1_k127_5166623_5 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 600.0
BYD1_k127_5166623_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 526.0
BYD1_k127_5166623_7 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 500.0
BYD1_k127_5166623_8 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007607 504.0
BYD1_k127_5166623_9 poly(R)-hydroxyalkanoic acid synthase K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 470.0
BYD1_k127_5178700_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 2.188e-235 734.0
BYD1_k127_5178700_1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 553.0
BYD1_k127_5178700_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 344.0
BYD1_k127_5178700_3 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000006243 248.0
BYD1_k127_5178700_4 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000005506 237.0
BYD1_k127_5203084_0 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 610.0
BYD1_k127_5203084_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 544.0
BYD1_k127_5203084_10 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000004212 224.0
BYD1_k127_5203084_11 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000000000003054 186.0
BYD1_k127_5203084_12 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000004961 173.0
BYD1_k127_5203084_13 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001373 144.0
BYD1_k127_5203084_14 - - - - 0.0000000000000000000000004429 114.0
BYD1_k127_5203084_15 oxidation-reduction process - - - 0.00000000000000000003418 90.0
BYD1_k127_5203084_16 Diguanylate cyclase - - - 0.00000004137 61.0
BYD1_k127_5203084_2 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 506.0
BYD1_k127_5203084_3 DEAD DEAH box helicase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 507.0
BYD1_k127_5203084_4 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 477.0
BYD1_k127_5203084_5 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 430.0
BYD1_k127_5203084_6 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001316 288.0
BYD1_k127_5203084_7 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000004855 273.0
BYD1_k127_5203084_8 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000001733 258.0
BYD1_k127_5203084_9 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000015 252.0
BYD1_k127_5203864_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1347.0
BYD1_k127_5203864_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000001058 98.0
BYD1_k127_5203864_2 cheY-homologous receiver domain K02657 - - 0.0000000000000000001433 99.0
BYD1_k127_5203864_3 GIY-YIG catalytic domain K02342 - 2.7.7.7 0.000000003193 68.0
BYD1_k127_5233499_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007141 466.0
BYD1_k127_5233499_1 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 424.0
BYD1_k127_5233499_2 Glutathione-dependent formaldehyde-activating enzyme family protein 4 - - - 0.00000000000000000000000000000000000000000000000000000000002184 208.0
BYD1_k127_5233499_3 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000001177 211.0
BYD1_k127_5233499_4 histone deacetylase - - - 0.000000000000000000000000000000000005561 140.0
BYD1_k127_5233499_5 - - - - 0.00000000000000004562 88.0
BYD1_k127_5319097_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009737 503.0
BYD1_k127_5319097_1 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 365.0
BYD1_k127_5319097_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 361.0
BYD1_k127_5319097_3 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 301.0
BYD1_k127_5319097_4 carboxylic acid catabolic process K01856 - 5.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001281 287.0
BYD1_k127_5319097_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000003977 220.0
BYD1_k127_5319097_6 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000001563 192.0
BYD1_k127_5319097_7 PIN domain - - - 0.0000000000000000000002575 108.0
BYD1_k127_5319097_8 positive regulation of growth - - - 0.0000000002171 64.0
BYD1_k127_5382507_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.506e-304 945.0
BYD1_k127_5382507_1 FAD binding domain K20940 - 1.14.13.218 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 536.0
BYD1_k127_5382507_2 phosphoserine phosphatase K01079 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000001283 288.0
BYD1_k127_5382507_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000002595 228.0
BYD1_k127_5382507_4 - - - - 0.000000000000000000000000000000000000000000000005028 181.0
BYD1_k127_5382507_5 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000005055 139.0
BYD1_k127_5390226_0 TRAP C4-dicarboxylate transport system permease DctM subunit - - - 2.554e-207 655.0
BYD1_k127_5390226_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 492.0
BYD1_k127_5390226_2 Belongs to the mandelate racemase muconate lactonizing enzyme family K01684 - 4.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 371.0
BYD1_k127_5390226_3 amidohydrolase 2 K07046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 332.0
BYD1_k127_5390226_4 Alanine dehydrogenase/PNT, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002413 291.0
BYD1_k127_5390226_5 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001091 242.0
BYD1_k127_5390226_6 TRAP-type mannitol chloroaromatic compound transport system small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000009581 256.0
BYD1_k127_5405676_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.635e-214 673.0
BYD1_k127_5405676_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 525.0
BYD1_k127_5405676_2 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000001681 250.0
BYD1_k127_5405676_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000002031 243.0
BYD1_k127_5405676_4 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000006391 151.0
BYD1_k127_5405676_5 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000003123 76.0
BYD1_k127_5405676_6 Amidohydrolase - - - 0.00000001832 56.0
BYD1_k127_5405676_7 ErfK YbiS YcfS YnhG family protein - - - 0.0000003431 52.0
BYD1_k127_5486043_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 4.454e-302 950.0
BYD1_k127_5486043_1 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 3.055e-226 717.0
BYD1_k127_5486043_2 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000003979 269.0
BYD1_k127_5486043_3 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000001547 221.0
BYD1_k127_5486043_4 metallochaperone-like domain K07402 - - 0.0000000000000000000000000000000000000000000000000000000000024 220.0
BYD1_k127_5486043_5 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000384 214.0
BYD1_k127_5486043_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0006441 47.0
BYD1_k127_557384_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.879e-278 863.0
BYD1_k127_557384_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.002e-270 837.0
BYD1_k127_557384_10 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000000000004553 180.0
BYD1_k127_557384_11 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000001774 124.0
BYD1_k127_557384_12 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000001261 65.0
BYD1_k127_557384_2 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 538.0
BYD1_k127_557384_3 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 526.0
BYD1_k127_557384_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 410.0
BYD1_k127_557384_5 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 398.0
BYD1_k127_557384_6 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 396.0
BYD1_k127_557384_7 Histidine kinase K07641 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 354.0
BYD1_k127_557384_8 Two component transcriptional regulator, winged helix family K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000585 318.0
BYD1_k127_557384_9 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 312.0
BYD1_k127_5623859_0 AcrB/AcrD/AcrF family K18138 - - 0.0 1278.0
BYD1_k127_5623859_1 Protein of unknown function - - - 2.808e-297 954.0
BYD1_k127_5623859_10 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 425.0
BYD1_k127_5623859_11 Outer membrane efflux protein K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 400.0
BYD1_k127_5623859_12 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 357.0
BYD1_k127_5623859_13 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 342.0
BYD1_k127_5623859_14 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 347.0
BYD1_k127_5623859_15 heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 331.0
BYD1_k127_5623859_16 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 321.0
BYD1_k127_5623859_17 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 316.0
BYD1_k127_5623859_18 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 322.0
BYD1_k127_5623859_19 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 300.0
BYD1_k127_5623859_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 7.651e-283 891.0
BYD1_k127_5623859_20 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 249.0
BYD1_k127_5623859_21 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000001785 227.0
BYD1_k127_5623859_22 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000002499 215.0
BYD1_k127_5623859_23 - - - - 0.000000000000000000000000000000000000000000000000009813 183.0
BYD1_k127_5623859_24 PFAM Formylglycine-generating sulfatase enzyme K18912,K20333 - 1.14.99.50 0.0000000000000000000000000000000000000000000000018 183.0
BYD1_k127_5623859_25 - - - - 0.00000000000000000000000000000000000000000000002491 176.0
BYD1_k127_5623859_26 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000001453 164.0
BYD1_k127_5623859_27 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18145 - - 0.00000000000000000000000000000000000000006105 155.0
BYD1_k127_5623859_28 SnoaL-like domain - - - 0.0000000000000000000000000000000000000009631 157.0
BYD1_k127_5623859_29 Carboxylesterase family - - - 0.0000000000000000000000000000000005066 148.0
BYD1_k127_5623859_3 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 5.987e-261 822.0
BYD1_k127_5623859_30 Histidine kinase - - - 0.000000000000000000000246 103.0
BYD1_k127_5623859_31 Transcriptional regulator - - - 0.0000000000000000001031 91.0
BYD1_k127_5623859_32 Zinc-finger domain - - - 0.00000000000000002467 85.0
BYD1_k127_5623859_4 ABC transporter K06147,K18893 - - 2.312e-254 800.0
BYD1_k127_5623859_5 Peptidase family M20/M25/M40 - - - 1.051e-212 669.0
BYD1_k127_5623859_6 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 2.501e-207 655.0
BYD1_k127_5623859_7 modulator of DNA gyrase K03568 - - 1.26e-199 634.0
BYD1_k127_5623859_8 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 503.0
BYD1_k127_5623859_9 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 488.0
BYD1_k127_5626990_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 1.864e-259 809.0
BYD1_k127_5626990_1 Belongs to the peptidase S16 family K04770 - - 8.447e-231 752.0
BYD1_k127_5626990_10 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004896 276.0
BYD1_k127_5626990_11 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000007808 211.0
BYD1_k127_5626990_12 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000001135 142.0
BYD1_k127_5626990_13 GYD domain - - - 0.000000000000000000000000000000003628 133.0
BYD1_k127_5626990_14 CoA binding domain K09181 - - 0.0000000000000000000000000000000083 136.0
BYD1_k127_5626990_15 SNARE associated Golgi protein - - - 0.000000000000000000000000000224 129.0
BYD1_k127_5626990_16 Phosphopantetheine attachment site - - - 0.0000000000000000000000002056 111.0
BYD1_k127_5626990_17 - - - - 0.00000000000000000002506 98.0
BYD1_k127_5626990_18 - - - - 0.00000000000000002793 85.0
BYD1_k127_5626990_19 - - - - 0.0000000000000002992 79.0
BYD1_k127_5626990_2 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 602.0
BYD1_k127_5626990_20 Belongs to the universal stress protein A family - - - 0.0003288 50.0
BYD1_k127_5626990_3 DNA polymerase X family K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009946 575.0
BYD1_k127_5626990_4 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 556.0
BYD1_k127_5626990_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 480.0
BYD1_k127_5626990_6 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 512.0
BYD1_k127_5626990_7 PFAM Transketolase central region K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 467.0
BYD1_k127_5626990_8 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 446.0
BYD1_k127_5626990_9 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 405.0
BYD1_k127_5637992_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 8.817e-274 846.0
BYD1_k127_5637992_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K01086,K03841 - 3.1.3.11,3.1.3.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007644 488.0
BYD1_k127_5637992_2 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 427.0
BYD1_k127_5637992_3 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009197 371.0
BYD1_k127_5637992_4 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000000000003215 203.0
BYD1_k127_5637992_5 PFAM ribulose bisphosphate carboxylase small chain K01602 - 4.1.1.39 0.000000000000000000000000000000000000000000000000003496 183.0
BYD1_k127_5637992_6 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.0000000000000002797 79.0
BYD1_k127_5641885_0 ABC-type dipeptide transport system periplasmic component K02035 - - 4.653e-217 696.0
BYD1_k127_5641885_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 422.0
BYD1_k127_5641885_2 Succinylglutamate desuccinylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006228 351.0
BYD1_k127_5641885_3 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008176 331.0
BYD1_k127_5641885_4 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000139 282.0
BYD1_k127_5641885_5 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002232 241.0
BYD1_k127_5641885_6 - - - - 0.000004853 51.0
BYD1_k127_5641885_7 Domain of unknown function (DUF4124) - - - 0.00002996 53.0
BYD1_k127_5641885_8 - - - - 0.0004487 49.0
BYD1_k127_5708474_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.87e-289 908.0
BYD1_k127_5708474_1 Bacterial transcriptional activator domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009705 638.0
BYD1_k127_5708474_10 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 333.0
BYD1_k127_5708474_11 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 322.0
BYD1_k127_5708474_12 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 296.0
BYD1_k127_5708474_13 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001661 269.0
BYD1_k127_5708474_14 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000001243 244.0
BYD1_k127_5708474_15 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000008026 239.0
BYD1_k127_5708474_16 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000006062 203.0
BYD1_k127_5708474_17 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000449 170.0
BYD1_k127_5708474_18 Hydrolase, P-loop family K06925 - - 0.0000000000000000000000000000000000000000000601 168.0
BYD1_k127_5708474_19 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000003301 113.0
BYD1_k127_5708474_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 603.0
BYD1_k127_5708474_20 - - - - 0.000000000000000000000001711 109.0
BYD1_k127_5708474_21 - - - - 0.00000000000000000000003372 100.0
BYD1_k127_5708474_22 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000001261 106.0
BYD1_k127_5708474_23 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000001297 84.0
BYD1_k127_5708474_24 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000004571 86.0
BYD1_k127_5708474_3 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 539.0
BYD1_k127_5708474_4 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009078 501.0
BYD1_k127_5708474_5 rieske 2fe-2s K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 488.0
BYD1_k127_5708474_6 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 490.0
BYD1_k127_5708474_7 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005319 408.0
BYD1_k127_5708474_8 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 381.0
BYD1_k127_5708474_9 IPP transferase K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 344.0
BYD1_k127_5713936_0 PFAM type II secretion system K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 421.0
BYD1_k127_5713936_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008157 342.0
BYD1_k127_5713936_2 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000003729 199.0
BYD1_k127_5722344_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1039.0
BYD1_k127_5722344_1 PFAM aminotransferase class I and II K00832 - 2.6.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 522.0
BYD1_k127_5830730_0 HELICc2 K03722 - 3.6.4.12 1.357e-234 754.0
BYD1_k127_5830730_1 transporter K02011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 584.0
BYD1_k127_5830730_10 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 0.00000000000000000000007858 103.0
BYD1_k127_5830730_11 TIGRFAM TonB family C-terminal domain K03832 - - 0.000008845 55.0
BYD1_k127_5830730_2 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 483.0
BYD1_k127_5830730_3 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 404.0
BYD1_k127_5830730_4 epimerase dehydratase K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005401 407.0
BYD1_k127_5830730_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 344.0
BYD1_k127_5830730_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000477 333.0
BYD1_k127_5830730_7 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 310.0
BYD1_k127_5830730_8 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000002696 232.0
BYD1_k127_5830730_9 Bacterial type II and III secretion system protein - - - 0.00000000000000000000000000000004725 135.0
BYD1_k127_5860818_0 Two-component sensor kinase N-terminal K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 347.0
BYD1_k127_5860818_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006736 261.0
BYD1_k127_5860818_2 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000001815 189.0
BYD1_k127_5860818_3 Sigma-54 interaction domain K07715 - - 0.0000000000000000001568 89.0
BYD1_k127_5875953_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1215.0
BYD1_k127_5875953_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000204 224.0
BYD1_k127_5875953_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000009041 222.0
BYD1_k127_5875953_3 transcriptional regulator K07734 - - 0.0000000000000000000000000000000000000000000000005104 189.0
BYD1_k127_5890260_0 Fumarate reductase flavoprotein C-term - - - 6.338e-246 773.0
BYD1_k127_5890260_1 Ethylbenzene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 528.0
BYD1_k127_5890260_2 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 416.0
BYD1_k127_5890260_3 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 347.0
BYD1_k127_5890260_4 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000003831 238.0
BYD1_k127_5890260_5 Fumarate reductase subunit C - - - 0.0000000000000000000000000000007495 136.0
BYD1_k127_5890260_6 Fumarate reductase subunit D - - - 0.00000000000000004641 85.0
BYD1_k127_5890260_7 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000001213 71.0
BYD1_k127_5913106_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1442.0
BYD1_k127_5913106_1 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1278.0
BYD1_k127_5913106_2 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 4.282e-234 739.0
BYD1_k127_5913106_3 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.077e-207 671.0
BYD1_k127_5913106_4 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 525.0
BYD1_k127_5913106_5 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 306.0
BYD1_k127_5913106_6 PFAM Conserved TM helix repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 290.0
BYD1_k127_5942555_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.478e-218 697.0
BYD1_k127_5942555_1 Cytochrome c-type protein K02569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 333.0
BYD1_k127_5942555_2 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.00000000000000000000000000000000000000000004217 166.0
BYD1_k127_5942555_3 Periplasmic nitrate reductase protein NapE K02571 - - 0.000000004859 68.0
BYD1_k127_5967042_0 PD-(D/E)XK nuclease superfamily K01144 - 3.1.11.5 8.002e-213 689.0
BYD1_k127_5967042_1 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 552.0
BYD1_k127_5967042_10 OmpA-like transmembrane domain - - - 0.000000000000000000003223 101.0
BYD1_k127_5967042_12 Cytochrome c - - - 0.00003679 52.0
BYD1_k127_5967042_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 521.0
BYD1_k127_5967042_3 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 381.0
BYD1_k127_5967042_4 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 363.0
BYD1_k127_5967042_5 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 370.0
BYD1_k127_5967042_6 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000822 278.0
BYD1_k127_5967042_7 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002159 274.0
BYD1_k127_5967042_8 YHS domain protein - - - 0.000000000000000000000000005956 115.0
BYD1_k127_5967042_9 - - - - 0.000000000000000000003012 106.0
BYD1_k127_6117308_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 5.828e-239 749.0
BYD1_k127_6117308_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 536.0
BYD1_k127_6117308_10 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000002061 130.0
BYD1_k127_6117308_11 - K06950 - - 0.0000000002407 64.0
BYD1_k127_6117308_2 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 524.0
BYD1_k127_6117308_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 427.0
BYD1_k127_6117308_4 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 402.0
BYD1_k127_6117308_5 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 362.0
BYD1_k127_6117308_6 Protein of unknown function (DUF3501) - - - 0.000000000000000000000000000000000000000000000000000000000000000000003899 242.0
BYD1_k127_6117308_7 PFAM N-acetylmuramoyl-L-alanine amidase K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000001649 225.0
BYD1_k127_6117308_8 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000115 149.0
BYD1_k127_6117308_9 Rubrerythrin - - - 0.000000000000000000000000000000001057 130.0
BYD1_k127_6132315_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 611.0
BYD1_k127_6132315_1 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 390.0
BYD1_k127_6132315_2 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006976 363.0
BYD1_k127_6132315_3 phytoene K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005142 332.0
BYD1_k127_6132315_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000001638 229.0
BYD1_k127_6132315_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000002634 99.0
BYD1_k127_6157580_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004029 562.0
BYD1_k127_6157580_1 Isocitrate/isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 554.0
BYD1_k127_6157580_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000006229 115.0
BYD1_k127_6157580_2 Tartrate dehydrogenase K07246 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 475.0
BYD1_k127_6157580_3 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 455.0
BYD1_k127_6157580_4 Permeases of the drug metabolite transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 301.0
BYD1_k127_6157580_5 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 298.0
BYD1_k127_6157580_6 Glycoprotease family K14742 - - 0.0000000000000000000000000000000000000000000000000000000000009917 216.0
BYD1_k127_6157580_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000004431 208.0
BYD1_k127_6157580_8 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000001035 213.0
BYD1_k127_6157580_9 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.000000000000000000000000000000000000002688 164.0
BYD1_k127_6170351_0 Bacterial extracellular solute-binding protein K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007876 403.0
BYD1_k127_6170351_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 387.0
BYD1_k127_6170351_10 PBP superfamily domain - - - 0.000000000000000000000000000000000000000000000000000002985 203.0
BYD1_k127_6170351_11 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.0000000000000000000000001161 120.0
BYD1_k127_6170351_2 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 299.0
BYD1_k127_6170351_3 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001128 302.0
BYD1_k127_6170351_4 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008614 282.0
BYD1_k127_6170351_5 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004064 276.0
BYD1_k127_6170351_6 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000001003 276.0
BYD1_k127_6170351_7 ABC transporter K06857 - 3.6.3.55 0.000000000000000000000000000000000000000000000000000000000000000000000001073 276.0
BYD1_k127_6170351_8 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000009387 231.0
BYD1_k127_6170351_9 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000003392 227.0
BYD1_k127_6236969_0 Proton-conducting membrane transporter K05568 - - 3.974e-207 658.0
BYD1_k127_6236969_1 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 644.0
BYD1_k127_6236969_10 Protein of unknown function (DUF2889) - - - 0.000000000000000000006758 93.0
BYD1_k127_6236969_11 - - - - 0.00000000000000003141 89.0
BYD1_k127_6236969_2 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 559.0
BYD1_k127_6236969_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000002791 249.0
BYD1_k127_6236969_4 Na H antiporter, MnhB K05566 - - 0.000000000000000000000000000000000000000000000000000000000006661 220.0
BYD1_k127_6236969_5 Na H antiporter, MnhB K05566 - - 0.0000000000000000000000000000000000000000000000000000003229 206.0
BYD1_k127_6236969_6 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.000000000000000000000000000000000000000000000000000007234 194.0
BYD1_k127_6236969_7 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.000000000000000000000000000000000000000001594 166.0
BYD1_k127_6236969_8 monovalent cation:proton antiporter activity K05571 - - 0.0000000000000000000000000000000002192 139.0
BYD1_k127_6236969_9 Multiple resistance and pH regulation protein F K05570 - - 0.0000000000000000000000003945 119.0
BYD1_k127_6379218_0 enoyl-CoA hydratase K15513 - 4.1.2.44 1.333e-225 717.0
BYD1_k127_6379218_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 604.0
BYD1_k127_6379218_2 AsmA family K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 594.0
BYD1_k127_6379218_3 Shikimate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008876 242.0
BYD1_k127_6379218_4 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000000000000000003736 216.0
BYD1_k127_6379218_5 Flavodoxin - - - 0.00000000000000000000000000000000000000000000000001267 184.0
BYD1_k127_6379218_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000001048 171.0
BYD1_k127_6398487_0 ATP-dependent DNA ligase K01971 - 6.5.1.1 8.741e-238 758.0
BYD1_k127_6398487_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 4.628e-215 675.0
BYD1_k127_6398487_10 Two-component sensor kinase N-terminal K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006318 285.0
BYD1_k127_6398487_11 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002019 261.0
BYD1_k127_6398487_12 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000026 253.0
BYD1_k127_6398487_13 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000171 244.0
BYD1_k127_6398487_14 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000001211 233.0
BYD1_k127_6398487_15 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000000000000000000009761 227.0
BYD1_k127_6398487_16 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 0.0000000000000000000000000000000000000000000000000000000002555 220.0
BYD1_k127_6398487_17 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000000000000002607 205.0
BYD1_k127_6398487_18 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000003523 193.0
BYD1_k127_6398487_19 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000001173 184.0
BYD1_k127_6398487_2 His Kinase A (phosphoacceptor) domain - - - 3.458e-213 704.0
BYD1_k127_6398487_20 Phospholipase D Active site motif K01115 - 3.1.4.4 0.0000000000000000000000000000000000000000000000001406 187.0
BYD1_k127_6398487_21 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.00000000000000000000000000000000000000000001481 183.0
BYD1_k127_6398487_22 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000000000000000000000000000000002044 170.0
BYD1_k127_6398487_23 Domain of unknown function (DUF4383) - - - 0.00000000000000000000000000000000000000001053 158.0
BYD1_k127_6398487_24 Thermostable hemolysin - - - 0.0000000000000000000000000000000000000007986 154.0
BYD1_k127_6398487_25 Diguanylate cyclase - - - 0.00000000000000000000000000000000001529 147.0
BYD1_k127_6398487_26 - - - - 0.0000000000000000000000000000000003015 138.0
BYD1_k127_6398487_27 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000000000003091 107.0
BYD1_k127_6398487_28 - - - - 0.00000000000000000000003905 106.0
BYD1_k127_6398487_29 BON domain - - - 0.0000000000000001616 86.0
BYD1_k127_6398487_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 522.0
BYD1_k127_6398487_31 BON domain K04065 - - 0.000000000003055 72.0
BYD1_k127_6398487_32 UPF0391 membrane protein - - - 0.000000000003477 78.0
BYD1_k127_6398487_33 UPF0391 membrane protein - - - 0.0000000000075 73.0
BYD1_k127_6398487_34 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000001555 70.0
BYD1_k127_6398487_36 EF hand - - - 0.00006468 51.0
BYD1_k127_6398487_37 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.00006981 52.0
BYD1_k127_6398487_38 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.00007058 50.0
BYD1_k127_6398487_39 polyketide synthase K16383,K19204,K19207 - - 0.0004845 45.0
BYD1_k127_6398487_4 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 458.0
BYD1_k127_6398487_5 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 434.0
BYD1_k127_6398487_6 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006466 413.0
BYD1_k127_6398487_7 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 427.0
BYD1_k127_6398487_8 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 301.0
BYD1_k127_6398487_9 Transcriptional regulatory protein, C terminal K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 298.0
BYD1_k127_645930_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 4.328e-194 625.0
BYD1_k127_645930_1 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 306.0
BYD1_k127_645930_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000002873 220.0
BYD1_k127_645930_3 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.000000000000000000000000000000000000000000000001052 185.0
BYD1_k127_645930_4 Pfam Response regulator receiver - - - 0.000000000000000001587 90.0
BYD1_k127_645930_5 acetoacetate metabolism regulatory protein AtoC K07714 K02481 - - 0.000000007863 62.0
BYD1_k127_645930_6 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0003676 52.0
BYD1_k127_6468955_0 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 486.0
BYD1_k127_6468955_1 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 424.0
BYD1_k127_6468955_2 PFAM Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 329.0
BYD1_k127_6468955_3 Transcriptional regulator crp fnr family K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002163 253.0
BYD1_k127_6468955_4 helicase superfamily c-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000001186 220.0
BYD1_k127_6468955_5 Nitrogen regulatory protein P-II K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000005886 202.0
BYD1_k127_6468955_6 Smr domain - - - 0.00000000000000000000000000000000000000002033 170.0
BYD1_k127_6468955_7 FtsK SpoIIIE K03466 - - 0.0000000000000000000000000001935 118.0
BYD1_k127_6479938_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 410.0
BYD1_k127_6479938_1 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.0000000000000000000000000000000000000000000000000000000006017 209.0
BYD1_k127_6479938_2 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000005714 180.0
BYD1_k127_65474_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 4.243e-281 884.0
BYD1_k127_65474_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 522.0
BYD1_k127_65474_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000164 248.0
BYD1_k127_65474_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000002037 190.0
BYD1_k127_65474_4 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000000003336 187.0
BYD1_k127_65474_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000001769 175.0
BYD1_k127_65474_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000001297 89.0
BYD1_k127_65474_7 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00004487 45.0
BYD1_k127_6558978_0 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 1.281e-273 848.0
BYD1_k127_6558978_1 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 442.0
BYD1_k127_6558978_2 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 375.0
BYD1_k127_6558978_3 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007302 258.0
BYD1_k127_6558978_4 PFAM ribulose bisphosphate carboxylase small chain K01602 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000343 197.0
BYD1_k127_659568_0 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 570.0
BYD1_k127_659568_1 Mota tolq exbb proton channel K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 326.0
BYD1_k127_659568_10 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.00000001747 56.0
BYD1_k127_659568_11 - - - - 0.000001792 50.0
BYD1_k127_659568_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000002862 196.0
BYD1_k127_659568_3 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000000000000000186 181.0
BYD1_k127_659568_4 TonB C terminal K03646 - - 0.00000000000000000000000000000000000000002509 168.0
BYD1_k127_659568_5 Acyl-CoA thioesterase K07107 - - 0.000000000000000000000000000000007929 131.0
BYD1_k127_659568_6 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000001015 121.0
BYD1_k127_659568_7 Belongs to the 'phage' integrase family - - - 0.000000000000000001032 91.0
BYD1_k127_659568_8 Bacterial protein of unknown function (DUF937) - - - 0.00000000000000000307 85.0
BYD1_k127_659568_9 Phage integrase family - - - 0.00000000002067 66.0
BYD1_k127_6603533_0 Catalytic subunit of the nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC. Essential function for nitrate assimilation and may have a role in anaerobic metabolism K02567 - - 0.0 1313.0
BYD1_k127_6603533_1 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006538 520.0
BYD1_k127_6603533_10 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000246 94.0
BYD1_k127_6603533_11 Thioesterase superfamily protein - - - 0.00000000002012 69.0
BYD1_k127_6603533_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 403.0
BYD1_k127_6603533_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 371.0
BYD1_k127_6603533_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 368.0
BYD1_k127_6603533_5 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 301.0
BYD1_k127_6603533_6 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002292 269.0
BYD1_k127_6603533_7 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000002215 142.0
BYD1_k127_6603533_8 Invasion gene expression up-regulator SirB - - - 0.00000000000000000000000000000009617 134.0
BYD1_k127_6603533_9 transcriptional regulator - - - 0.000000000000000000000000000005842 127.0
BYD1_k127_6635649_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 617.0
BYD1_k127_6635649_1 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 473.0
BYD1_k127_6635649_10 Putative prokaryotic signal transducing protein - - - 0.000000000000000000001119 97.0
BYD1_k127_6635649_11 - - - - 0.0000000000000000003364 93.0
BYD1_k127_6635649_12 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000301 87.0
BYD1_k127_6635649_13 - - - - 0.00000000000005313 75.0
BYD1_k127_6635649_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 417.0
BYD1_k127_6635649_3 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 314.0
BYD1_k127_6635649_4 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003354 273.0
BYD1_k127_6635649_5 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001942 252.0
BYD1_k127_6635649_6 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000006454 209.0
BYD1_k127_6635649_7 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000004974 199.0
BYD1_k127_6635649_8 diol metabolic process K01724 - 4.2.1.96 0.000000000000000000000000000000000000000005368 169.0
BYD1_k127_6635649_9 glucose-6-phosphate isomerase activity K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.0000000000000000000000001099 107.0
BYD1_k127_6639922_0 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008585 436.0
BYD1_k127_6639922_1 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 374.0
BYD1_k127_6639922_2 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 344.0
BYD1_k127_6639922_3 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 348.0
BYD1_k127_6639922_4 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 318.0
BYD1_k127_6639922_5 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000362 290.0
BYD1_k127_6639922_6 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000102 266.0
BYD1_k127_6639922_7 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000003626 232.0
BYD1_k127_6639922_8 Transposase K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000001718 228.0
BYD1_k127_6639922_9 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000001401 76.0
BYD1_k127_6643520_0 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 331.0
BYD1_k127_6643520_1 Domain of unknown function (DUF1932) - - - 0.0000000000000000000000000000000000000000000000000000000000000003012 230.0
BYD1_k127_6643520_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000006366 193.0
BYD1_k127_6643520_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000002972 99.0
BYD1_k127_6648961_0 Bifunctional transglycosylase second domain K05365 - 2.4.1.129,3.4.16.4 4.121e-285 894.0
BYD1_k127_6648961_1 Major facilitator superfamily K08167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 529.0
BYD1_k127_6648961_10 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003718 278.0
BYD1_k127_6648961_11 haloacid dehalogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005745 251.0
BYD1_k127_6648961_12 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001513 252.0
BYD1_k127_6648961_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.00000000000000000000000000000000000000000000000000000000000000006665 225.0
BYD1_k127_6648961_14 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000003135 181.0
BYD1_k127_6648961_15 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.0000000000000000000000000000000000000000000001482 173.0
BYD1_k127_6648961_16 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000006245 175.0
BYD1_k127_6648961_17 Protein of unknown function (DUF3618) - - - 0.00000000000000000000000000000000000000001064 163.0
BYD1_k127_6648961_18 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000003107 156.0
BYD1_k127_6648961_19 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000003523 156.0
BYD1_k127_6648961_2 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 461.0
BYD1_k127_6648961_20 Protein of unknown function (DUF2892) - - - 0.0000000000000000000000000000000000000006341 152.0
BYD1_k127_6648961_21 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000000000007046 149.0
BYD1_k127_6648961_22 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000000000000000001597 113.0
BYD1_k127_6648961_23 Tetratricopeptide repeat - - - 0.00000000000000000002238 97.0
BYD1_k127_6648961_24 Glyoxalase-like domain K06996 - - 0.000000000000009257 81.0
BYD1_k127_6648961_25 - - - - 0.00000000000146 76.0
BYD1_k127_6648961_26 MlaD protein K02067 - - 0.00000000009769 66.0
BYD1_k127_6648961_3 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 444.0
BYD1_k127_6648961_4 transport, permease protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000718 409.0
BYD1_k127_6648961_5 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 392.0
BYD1_k127_6648961_6 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 358.0
BYD1_k127_6648961_7 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 303.0
BYD1_k127_6648961_8 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 290.0
BYD1_k127_6648961_9 ABC transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 302.0
BYD1_k127_6676398_0 UDP binding domain K02474 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 606.0
BYD1_k127_6676398_1 Polysaccharide biosynthesis protein K02473,K08679 - 5.1.3.6,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 440.0
BYD1_k127_6676398_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 300.0
BYD1_k127_6676398_3 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001561 270.0
BYD1_k127_6676398_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000842 276.0
BYD1_k127_6676398_5 Glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001382 245.0
BYD1_k127_6676398_6 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000003693 243.0
BYD1_k127_6676398_7 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000004259 198.0
BYD1_k127_6676398_8 Glycosyl transferases group 1 - - - 0.00000000000005432 78.0
BYD1_k127_6678365_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 446.0
BYD1_k127_6678365_1 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 334.0
BYD1_k127_6678365_2 50S ribosomal protein L4 K02926 - - 0.000000000000000000000000000000000000000000000000000000000001653 211.0
BYD1_k127_6678365_3 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000007831 190.0
BYD1_k127_6678365_4 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000002173 158.0
BYD1_k127_6678365_5 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000000000004962 137.0
BYD1_k127_6726732_0 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 4.036e-299 931.0
BYD1_k127_6726732_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 507.0
BYD1_k127_6726732_2 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 469.0
BYD1_k127_6726732_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000001708 121.0
BYD1_k127_6846532_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1349.0
BYD1_k127_6846532_1 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 5.293e-311 971.0
BYD1_k127_6846532_10 Shikimate kinase K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000008109 224.0
BYD1_k127_6846532_11 fimbrial biogenesis protein PilN K02663 - - 0.000000000000000000000000000000000000000000000000000000001221 209.0
BYD1_k127_6846532_12 pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000000000000001423 156.0
BYD1_k127_6846532_13 Belongs to the frataxin K06202 - - 0.0000000000000000000000000000000007674 141.0
BYD1_k127_6846532_2 type II and III secretion system protein K02666 - - 1.313e-240 773.0
BYD1_k127_6846532_3 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 1.239e-203 645.0
BYD1_k127_6846532_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 494.0
BYD1_k127_6846532_5 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 475.0
BYD1_k127_6846532_6 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 428.0
BYD1_k127_6846532_7 NYN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 349.0
BYD1_k127_6846532_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 295.0
BYD1_k127_6846532_9 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000000000000001382 238.0
BYD1_k127_6923903_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008752 588.0
BYD1_k127_6923903_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003375 264.0
BYD1_k127_7001072_0 carbon monoxide dehydrogenase K03520 - 1.2.5.3 0.0 1109.0
BYD1_k127_7001072_1 ABC transporter - - - 2.028e-233 733.0
BYD1_k127_7001072_10 COG1175 ABC-type sugar transport systems, permease components K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 422.0
BYD1_k127_7001072_11 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 402.0
BYD1_k127_7001072_12 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 353.0
BYD1_k127_7001072_13 Inner membrane protein CreD K06143 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 325.0
BYD1_k127_7001072_14 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 311.0
BYD1_k127_7001072_15 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 308.0
BYD1_k127_7001072_16 Subtilase family K12685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004889 292.0
BYD1_k127_7001072_17 TIGRFAM SagB-type dehydrogenase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005702 256.0
BYD1_k127_7001072_18 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000004429 253.0
BYD1_k127_7001072_19 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001669 246.0
BYD1_k127_7001072_2 D-aminoacylase domain protein K06015 - 3.5.1.81 3.866e-212 668.0
BYD1_k127_7001072_20 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000006832 253.0
BYD1_k127_7001072_21 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000007627 209.0
BYD1_k127_7001072_22 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000000000000000000000003205 214.0
BYD1_k127_7001072_23 monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000009445 184.0
BYD1_k127_7001072_24 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000543 177.0
BYD1_k127_7001072_25 NIPSNAP - - - 0.00000000000000000000000000000000000000003382 154.0
BYD1_k127_7001072_26 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000001817 149.0
BYD1_k127_7001072_27 OmpA-like transmembrane domain - - - 0.000000000000000000000000000000000001057 145.0
BYD1_k127_7001072_28 homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.000000000000000000000000000000000229 138.0
BYD1_k127_7001072_29 psiF repeat - - - 0.000000000000000000000004051 106.0
BYD1_k127_7001072_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 611.0
BYD1_k127_7001072_30 Thioesterase-like superfamily - - - 0.000000000000000000104 94.0
BYD1_k127_7001072_31 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000004007 88.0
BYD1_k127_7001072_32 ATPase family associated with various cellular activities (AAA) - - - 0.000000006752 67.0
BYD1_k127_7001072_33 PFAM Peptidoglycan-binding domain 1 protein - - - 0.0001007 50.0
BYD1_k127_7001072_34 Membrane protein YqjD - GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0043021,GO:0043024,GO:0044464,GO:0044877,GO:0060187,GO:0071944 - 0.0007132 48.0
BYD1_k127_7001072_4 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008685 599.0
BYD1_k127_7001072_5 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 525.0
BYD1_k127_7001072_6 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 484.0
BYD1_k127_7001072_7 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 474.0
BYD1_k127_7001072_8 Patatin phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 443.0
BYD1_k127_7001072_9 COG0395 ABC-type sugar transport system, permease component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 436.0
BYD1_k127_7008192_0 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 370.0
BYD1_k127_7008192_1 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000003655 194.0
BYD1_k127_7008192_2 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000003102 190.0
BYD1_k127_7008192_3 - - - - 0.000000000000000000000000000000000003378 141.0
BYD1_k127_7008192_4 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.0000000000000000000000000000001177 124.0
BYD1_k127_7142998_0 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 366.0
BYD1_k127_7142998_1 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 352.0
BYD1_k127_7142998_2 sulfur carrier activity K08363 - - 0.00005055 56.0
BYD1_k127_7144405_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 4.433e-283 885.0
BYD1_k127_7144405_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003648 542.0
BYD1_k127_7144405_2 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001225 265.0
BYD1_k127_7144405_3 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000001363 236.0
BYD1_k127_7144405_4 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000000196 145.0
BYD1_k127_7145015_0 Heat shock 70 kDa protein K04043 - - 0.0 1011.0
BYD1_k127_7145015_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005901 527.0
BYD1_k127_7145015_2 AsmA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 546.0
BYD1_k127_7145015_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 460.0
BYD1_k127_7145015_4 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 314.0
BYD1_k127_7145015_5 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 289.0
BYD1_k127_7145015_6 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000007174 184.0
BYD1_k127_7145015_7 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000003337 150.0
BYD1_k127_7149703_0 Aldehyde dehydrogenase family K15515 - 1.2.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 586.0
BYD1_k127_7149703_1 Belongs to the succinate malate CoA ligase beta subunit family K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 431.0
BYD1_k127_7149703_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006688 372.0
BYD1_k127_7150340_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.631e-234 730.0
BYD1_k127_7150340_1 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 7.145e-197 623.0
BYD1_k127_7150340_10 PFAM ribosomal protein L31 K02909 - - 0.0000000000000000000000000003298 119.0
BYD1_k127_7150340_11 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000112 89.0
BYD1_k127_7150340_12 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000005058 66.0
BYD1_k127_7150340_2 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 537.0
BYD1_k127_7150340_3 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 467.0
BYD1_k127_7150340_4 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 370.0
BYD1_k127_7150340_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 316.0
BYD1_k127_7150340_6 COG2041 Sulfite oxidase and related enzymes K00387 - 1.8.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006931 281.0
BYD1_k127_7150340_7 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000003701 194.0
BYD1_k127_7150340_8 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000009574 184.0
BYD1_k127_7150340_9 Cytochrome c, class I K05301 - 1.8.2.1 0.00000000000000000000000000000001189 138.0
BYD1_k127_7152295_0 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009188 516.0
BYD1_k127_7152295_1 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 353.0
BYD1_k127_7165095_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 8.196e-236 739.0
BYD1_k127_7165095_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 475.0
BYD1_k127_7165095_2 Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 335.0
BYD1_k127_7165095_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 299.0
BYD1_k127_7165095_4 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003193 258.0
BYD1_k127_7165095_5 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000009682 91.0
BYD1_k127_7253667_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.633e-299 925.0
BYD1_k127_7253667_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 9.086e-263 836.0
BYD1_k127_7253667_10 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 370.0
BYD1_k127_7253667_11 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 362.0
BYD1_k127_7253667_12 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 360.0
BYD1_k127_7253667_13 RNA polymerase sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 315.0
BYD1_k127_7253667_14 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 329.0
BYD1_k127_7253667_15 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 295.0
BYD1_k127_7253667_16 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 288.0
BYD1_k127_7253667_17 negative regulator of sigma E activity K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003273 258.0
BYD1_k127_7253667_18 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000003534 254.0
BYD1_k127_7253667_19 Uroporphyrin-III C tetrapyrrole K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000001933 233.0
BYD1_k127_7253667_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 5.178e-197 620.0
BYD1_k127_7253667_20 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000009123 231.0
BYD1_k127_7253667_21 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000001303 211.0
BYD1_k127_7253667_22 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000006135 207.0
BYD1_k127_7253667_23 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000003062 185.0
BYD1_k127_7253667_24 rieske 2fe-2s - - - 0.000000000000000000000000000000000001004 143.0
BYD1_k127_7253667_25 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000001433 133.0
BYD1_k127_7253667_26 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000002623 134.0
BYD1_k127_7253667_27 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000000000000000335 122.0
BYD1_k127_7253667_28 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000001469 106.0
BYD1_k127_7253667_29 Belongs to the 'phage' integrase family - - - 0.0000000000000000000003619 108.0
BYD1_k127_7253667_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 595.0
BYD1_k127_7253667_30 Domain of unknown function (DUF4845) - - - 0.000000000000000004523 91.0
BYD1_k127_7253667_31 PFAM glutaredoxin 2 - - - 0.00000000000003071 78.0
BYD1_k127_7253667_32 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.0000000000001643 76.0
BYD1_k127_7253667_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 580.0
BYD1_k127_7253667_5 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 430.0
BYD1_k127_7253667_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 433.0
BYD1_k127_7253667_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 414.0
BYD1_k127_7253667_8 malonyl CoA-acyl carrier protein transacylase K00645,K15355 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 397.0
BYD1_k127_7253667_9 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 392.0
BYD1_k127_7347196_0 Belongs to the aldehyde dehydrogenase family - - - 2.26e-226 719.0
BYD1_k127_7347196_1 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 1.549e-212 676.0
BYD1_k127_7347196_10 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000009439 246.0
BYD1_k127_7347196_11 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000001428 212.0
BYD1_k127_7347196_12 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000002547 188.0
BYD1_k127_7347196_13 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000008215 183.0
BYD1_k127_7347196_14 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000005549 192.0
BYD1_k127_7347196_15 Glyoxalase-like domain K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000009991 166.0
BYD1_k127_7347196_16 Universal stress protein family - - - 0.0000000000000000000000000000000000000003595 160.0
BYD1_k127_7347196_17 Cyclophilin-like K09143 - - 0.00000000000000000000000000000112 136.0
BYD1_k127_7347196_18 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000000000000001179 115.0
BYD1_k127_7347196_19 KTSC domain - - - 0.00000004472 63.0
BYD1_k127_7347196_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 555.0
BYD1_k127_7347196_20 - - - - 0.00000598 52.0
BYD1_k127_7347196_3 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009455 577.0
BYD1_k127_7347196_4 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 514.0
BYD1_k127_7347196_5 Sodium hydrogen exchanger K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 489.0
BYD1_k127_7347196_6 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006651 408.0
BYD1_k127_7347196_7 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 295.0
BYD1_k127_7347196_8 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002309 282.0
BYD1_k127_7347196_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003994 261.0
BYD1_k127_7381462_0 twitching motility protein K02670 - - 1.719e-205 643.0
BYD1_k127_7381462_1 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 450.0
BYD1_k127_7381462_10 lipid kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000008749 221.0
BYD1_k127_7381462_11 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000002715 183.0
BYD1_k127_7381462_12 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000453 181.0
BYD1_k127_7381462_2 PFAM ABC transporter related K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 426.0
BYD1_k127_7381462_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 362.0
BYD1_k127_7381462_4 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 370.0
BYD1_k127_7381462_5 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 296.0
BYD1_k127_7381462_6 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 301.0
BYD1_k127_7381462_7 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005073 268.0
BYD1_k127_7381462_8 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006448 269.0
BYD1_k127_7381462_9 Serine aminopeptidase, S33 K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000005173 230.0
BYD1_k127_7409618_0 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 533.0
BYD1_k127_7409618_1 lytic transglycosylase activity - - - 0.000000000000000000000000000000000000000000000001954 189.0
BYD1_k127_7411939_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 514.0
BYD1_k127_7411939_1 PFAM Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007019 425.0
BYD1_k127_7411939_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 418.0
BYD1_k127_7411939_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 333.0
BYD1_k127_7411939_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 316.0
BYD1_k127_7411939_5 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 304.0
BYD1_k127_7411939_6 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001451 255.0
BYD1_k127_7411939_7 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000001019 236.0
BYD1_k127_7411939_8 Protein of unknown function (DUF1161) - - - 0.00000000000000001087 85.0
BYD1_k127_7411939_9 Domain of unknown function (DUF1992) - - - 0.000000000000005297 89.0
BYD1_k127_741200_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 433.0
BYD1_k127_741200_1 Enoyl-(Acyl carrier protein) reductase K00059,K07535 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 301.0
BYD1_k127_741200_2 translation initiation inhibitor, yjgF family - - - 0.00000000000000000000000000000000000000000000004338 173.0
BYD1_k127_741200_3 Dehydrogenase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000001053 166.0
BYD1_k127_741200_4 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000001033 168.0
BYD1_k127_741200_5 Rubrerythrin - - - 0.000000000000000000000000000000000001755 145.0
BYD1_k127_745549_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 606.0
BYD1_k127_745549_1 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 410.0
BYD1_k127_745549_2 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 381.0
BYD1_k127_745549_3 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 375.0
BYD1_k127_745549_4 protein conserved in bacteria K09937 - - 0.0000000000000000007672 87.0
BYD1_k127_745549_5 Bacterial regulatory proteins, tetR family - - - 0.0000000000007236 71.0
BYD1_k127_7462256_0 Oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009414 614.0
BYD1_k127_7462256_1 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 450.0
BYD1_k127_7462256_2 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 336.0
BYD1_k127_7462256_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000001633 254.0
BYD1_k127_7462256_4 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000008841 237.0
BYD1_k127_7462256_5 Flavodoxin-like fold K19784 - - 0.000000000000000000000000000000000000000000000000000001403 199.0
BYD1_k127_7462256_6 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000005983 178.0
BYD1_k127_7462256_7 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000214 173.0
BYD1_k127_7463371_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K15408 - 1.9.3.1 0.0 1020.0
BYD1_k127_7463371_1 Proline racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 401.0
BYD1_k127_7463371_11 EF hand - - - 0.0003 49.0
BYD1_k127_7463371_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 307.0
BYD1_k127_7463371_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000362 254.0
BYD1_k127_7463371_4 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000002501 208.0
BYD1_k127_7463371_5 COG2207 AraC-type DNA-binding domain-containing proteins - - - 0.00000000000000000000000000000000000000000000004941 179.0
BYD1_k127_7463371_6 Cytochrome c - - - 0.000000000000000000000000000000000003186 146.0
BYD1_k127_7463371_8 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000393 87.0
BYD1_k127_7463371_9 N-terminal half of MaoC dehydratase - - - 0.00000000000001583 73.0
BYD1_k127_747335_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 571.0
BYD1_k127_747335_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 421.0
BYD1_k127_747335_2 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 381.0
BYD1_k127_747335_3 PFAM Bacterial protein of - - - 0.00000000000000000000000000000000000000000000000000000000000000000003763 236.0
BYD1_k127_747335_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000005718 211.0
BYD1_k127_747335_5 - - - - 0.000000000000000000000000007842 113.0
BYD1_k127_747335_6 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0000000000003344 72.0
BYD1_k127_748154_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1350.0
BYD1_k127_748154_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 3.315e-254 802.0
BYD1_k127_748154_10 Thioredoxin-like - - - 0.00000000000000000000000000000000004014 143.0
BYD1_k127_748154_11 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.0000000000000000000000000000001734 128.0
BYD1_k127_748154_12 Protein required for attachment to host cells - - - 0.00000000000000000002903 98.0
BYD1_k127_748154_13 Flavinator of succinate dehydrogenase K09159 - - 0.0000000006707 70.0
BYD1_k127_748154_14 Protein of unknown function (DUF3460) - - - 0.0000001653 61.0
BYD1_k127_748154_2 MmgE/PrpD family K01720 - 4.2.1.79 8.356e-253 786.0
BYD1_k127_748154_3 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 597.0
BYD1_k127_748154_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 475.0
BYD1_k127_748154_5 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007516 451.0
BYD1_k127_748154_6 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009579 406.0
BYD1_k127_748154_7 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000001439 208.0
BYD1_k127_748154_8 cytochrome - - - 0.0000000000000000000000000000000000000000000005393 173.0
BYD1_k127_748154_9 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.00000000000000000000000000000000000001638 148.0
BYD1_k127_7528874_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0 1107.0
BYD1_k127_7528874_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 6.677e-299 934.0
BYD1_k127_7528874_10 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000003374 166.0
BYD1_k127_7528874_11 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000001071 181.0
BYD1_k127_7528874_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 428.0
BYD1_k127_7528874_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 359.0
BYD1_k127_7528874_4 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 352.0
BYD1_k127_7528874_5 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009342 347.0
BYD1_k127_7528874_6 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 329.0
BYD1_k127_7528874_7 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000007471 228.0
BYD1_k127_7528874_8 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000002828 199.0
BYD1_k127_7528874_9 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000000002361 193.0
BYD1_k127_7600990_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002852 606.0
BYD1_k127_7600990_1 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 474.0
BYD1_k127_7600990_2 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000006145 231.0
BYD1_k127_7618829_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 2.926e-268 835.0
BYD1_k127_7618829_1 4Fe-4S dicluster domain - - - 1.332e-234 745.0
BYD1_k127_7618829_10 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000001958 231.0
BYD1_k127_7618829_11 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000006334 217.0
BYD1_k127_7618829_12 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000001266 164.0
BYD1_k127_7618829_13 Protein of unknown function (DUF3305) - - - 0.000000000000000000000000000000000001385 150.0
BYD1_k127_7618829_14 Protein of unknown function (DUF3306) - - - 0.0000000000000001375 89.0
BYD1_k127_7618829_15 - - - - 0.00001448 49.0
BYD1_k127_7618829_2 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007066 517.0
BYD1_k127_7618829_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 501.0
BYD1_k127_7618829_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009581 480.0
BYD1_k127_7618829_5 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 419.0
BYD1_k127_7618829_6 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 387.0
BYD1_k127_7618829_7 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 380.0
BYD1_k127_7618829_8 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 295.0
BYD1_k127_7618829_9 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000004727 256.0
BYD1_k127_7646250_0 Aldehyde dehydrogenase K00128,K00130 - 1.2.1.3,1.2.1.8 7.346e-211 666.0
BYD1_k127_7646250_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00001,K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 490.0
BYD1_k127_7646250_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000081 429.0
BYD1_k127_7646250_3 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 375.0
BYD1_k127_7646250_4 SMART cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000001813 218.0
BYD1_k127_7646250_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768,K07678 - 2.7.13.3,4.6.1.1 0.00000000000000000000000000000000004407 140.0
BYD1_k127_7729956_0 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 5.253e-269 838.0
BYD1_k127_7729956_1 transport system, permease component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 547.0
BYD1_k127_7729956_2 transport system, permease component K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 548.0
BYD1_k127_7729956_3 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031,K02032,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 404.0
BYD1_k127_7729956_4 VWA domain containing CoxE-like protein K09989 - - 0.000000000000000000005684 95.0
BYD1_k127_777109_0 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 9.727e-199 634.0
BYD1_k127_777109_1 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 591.0
BYD1_k127_777109_2 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 329.0
BYD1_k127_777109_3 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005174 301.0
BYD1_k127_777109_4 PFAM Short-chain dehydrogenase reductase SDR K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000001407 180.0
BYD1_k127_777109_5 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000008197 177.0
BYD1_k127_777109_6 Acetoacetyl-CoA reductase K00023 - 1.1.1.36 0.0000000000000000000000000000000000000000000001919 170.0
BYD1_k127_7833028_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 2.041e-278 870.0
BYD1_k127_7833028_1 Transport of potassium into the cell K03549 - - 4.697e-267 836.0
BYD1_k127_7833028_10 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009175 432.0
BYD1_k127_7833028_11 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 441.0
BYD1_k127_7833028_12 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 418.0
BYD1_k127_7833028_13 Zinc-uptake complex component A periplasmic K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008487 371.0
BYD1_k127_7833028_14 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 367.0
BYD1_k127_7833028_15 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 305.0
BYD1_k127_7833028_16 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 293.0
BYD1_k127_7833028_17 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006797 289.0
BYD1_k127_7833028_18 ABC-3 protein K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000429 283.0
BYD1_k127_7833028_19 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000009948 224.0
BYD1_k127_7833028_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 560.0
BYD1_k127_7833028_20 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000004623 227.0
BYD1_k127_7833028_21 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000001561 208.0
BYD1_k127_7833028_22 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000000000001455 207.0
BYD1_k127_7833028_23 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000004234 100.0
BYD1_k127_7833028_3 Cobalamin-independent synthase, Catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 514.0
BYD1_k127_7833028_4 TIGRFAM amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 510.0
BYD1_k127_7833028_5 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 503.0
BYD1_k127_7833028_6 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 510.0
BYD1_k127_7833028_7 GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 501.0
BYD1_k127_7833028_8 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 478.0
BYD1_k127_7833028_9 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 450.0
BYD1_k127_7852414_0 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 1.561e-298 923.0
BYD1_k127_7852414_1 7TM diverse intracellular signalling - - - 4.856e-294 930.0
BYD1_k127_7852414_10 p-type atpase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001104 248.0
BYD1_k127_7852414_11 transcriptional regulator AsnC family - - - 0.0000000000000000000000000000000000000000000000000000000000567 208.0
BYD1_k127_7852414_12 - - - - 0.000000000000000000000000000000000000000000000000000000009281 204.0
BYD1_k127_7852414_13 cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000000000000003376 193.0
BYD1_k127_7852414_14 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.0000000000000000000000000000000000000000000000000004467 193.0
BYD1_k127_7852414_15 Formylmethanofuran dehydrogenase, subunit e - - - 0.00000000000000000000000000000000000000000000000001871 185.0
BYD1_k127_7852414_16 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000004377 180.0
BYD1_k127_7852414_17 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000000006641 149.0
BYD1_k127_7852414_18 - - - - 0.00000000000000000000000000000000000198 145.0
BYD1_k127_7852414_19 Dihaem cytochrome c - - - 0.00000000000000000000000000000000691 138.0
BYD1_k127_7852414_2 cytochrome - - - 7.337e-217 691.0
BYD1_k127_7852414_20 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000000000000000000000000000131 117.0
BYD1_k127_7852414_21 Glyoxalase-like domain K01759,K08234 - 4.4.1.5 0.0000000000000000000000000008583 124.0
BYD1_k127_7852414_22 - - - - 0.000000000000000000000000001748 123.0
BYD1_k127_7852414_23 Cytochrome C' - - - 0.00000000000000000000008452 113.0
BYD1_k127_7852414_24 PRC-barrel domain - - - 0.000000000000000166 87.0
BYD1_k127_7852414_26 - - - - 0.00000126 54.0
BYD1_k127_7852414_3 4Fe-4S single cluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 583.0
BYD1_k127_7852414_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 536.0
BYD1_k127_7852414_5 PFAM NnrS family protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 367.0
BYD1_k127_7852414_6 PFAM Response regulator receiver domain K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001642 281.0
BYD1_k127_7852414_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001895 280.0
BYD1_k127_7852414_8 CRP FNR family K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003658 263.0
BYD1_k127_7852414_9 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000001969 259.0
BYD1_k127_7862772_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 606.0
BYD1_k127_7862772_1 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 509.0
BYD1_k127_7862772_10 protein involved in tolerance to divalent cations K03926 - - 0.00000000000000000000000000000000000000007655 153.0
BYD1_k127_7862772_11 PFAM cytochrome c, class I - - - 0.0000000001452 67.0
BYD1_k127_7862772_2 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 477.0
BYD1_k127_7862772_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 479.0
BYD1_k127_7862772_4 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 414.0
BYD1_k127_7862772_5 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 393.0
BYD1_k127_7862772_6 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 358.0
BYD1_k127_7862772_7 abc transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007142 278.0
BYD1_k127_7862772_8 epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000009974 259.0
BYD1_k127_7862772_9 Ferrous iron transport protein B K03978 - - 0.0000000000000000000000000000000000000000000000000009914 191.0
BYD1_k127_7893323_0 Methylmalonyl-CoA mutase K01848,K14447,K20906 - 5.4.99.2,5.4.99.63,5.4.99.64 6.912e-257 803.0
BYD1_k127_7893323_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 490.0
BYD1_k127_7893323_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000007452 143.0
BYD1_k127_7893323_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000001256 114.0
BYD1_k127_7893323_2 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 447.0
BYD1_k127_7893323_3 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 422.0
BYD1_k127_7893323_4 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 398.0
BYD1_k127_7893323_5 PFAM Acyl-CoA dehydrogenase type 2 K16047 - 1.14.14.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 338.0
BYD1_k127_7893323_6 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 299.0
BYD1_k127_7893323_7 Bacterial transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000005 207.0
BYD1_k127_7893323_8 transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000641 208.0
BYD1_k127_7893323_9 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 0.000000000000000000000000000000000000000004846 160.0
BYD1_k127_7909635_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 492.0
BYD1_k127_7909635_1 Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 381.0
BYD1_k127_7909635_2 Acetyl-coenzyme A synthetase N-terminus K01908 - 6.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 372.0
BYD1_k127_7909635_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 300.0
BYD1_k127_7909635_4 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000008424 231.0
BYD1_k127_7909635_5 Haem-degrading K11477 - - 0.0000000000000000000000000000001136 138.0
BYD1_k127_7939147_0 DNA helicase K03657 - 3.6.4.12 6.992e-299 931.0
BYD1_k127_7939147_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 5.862e-261 820.0
BYD1_k127_7939147_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 464.0
BYD1_k127_7939147_3 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 432.0
BYD1_k127_7939147_4 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 401.0
BYD1_k127_7939147_5 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 387.0
BYD1_k127_7939147_6 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 341.0
BYD1_k127_7939147_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 289.0
BYD1_k127_7940434_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008057 513.0
BYD1_k127_7940434_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 494.0
BYD1_k127_7940434_2 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 319.0
BYD1_k127_7940434_3 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 306.0
BYD1_k127_7940434_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 297.0
BYD1_k127_7940434_5 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004902 265.0
BYD1_k127_7940434_6 AAA domain K00663,K07028 GO:0003674,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0008150,GO:0009987,GO:0030312,GO:0044464,GO:0044764,GO:0046812,GO:0051704,GO:0071944 2.3.1.82 0.000000000000000000000000000002726 128.0
BYD1_k127_7940434_7 Hydrolase K01091 - 3.1.3.18 0.00000000000000000218 95.0
BYD1_k127_7940434_8 bacterial OsmY and nodulation domain - - - 0.0009931 50.0
BYD1_k127_7968469_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 614.0
BYD1_k127_7968469_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 552.0
BYD1_k127_7968469_2 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009957 278.0
BYD1_k127_7968469_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001279 250.0
BYD1_k127_7968469_4 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000001016 184.0
BYD1_k127_7968469_5 synthesis repressor, PhaR - - - 0.0000000005415 61.0
BYD1_k127_801744_0 Cytochrome c K02198 - - 2.131e-203 645.0
BYD1_k127_801744_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005245 364.0
BYD1_k127_801744_2 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000005134 207.0
BYD1_k127_801744_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000276 173.0
BYD1_k127_8033309_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004012 400.0
BYD1_k127_8033309_1 Pfam:KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001938 344.0
BYD1_k127_8033309_2 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000008612 225.0
BYD1_k127_8033309_3 PAS fold - - - 0.0000000000000000000000000000000000002233 152.0
BYD1_k127_8033309_4 KaiB K08481 - - 0.000000000000000000000000000000007411 142.0
BYD1_k127_8033309_5 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain - - - 0.0000000000000004023 87.0
BYD1_k127_8033309_6 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000002968 53.0
BYD1_k127_803678_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 4.471e-194 625.0
BYD1_k127_803678_1 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 477.0
BYD1_k127_803678_2 PFAM AMP-dependent synthetase and ligase K20034 - 6.2.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002017 417.0
BYD1_k127_803678_3 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002633 250.0
BYD1_k127_803678_4 diguanylate cyclase K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000009025 220.0
BYD1_k127_803678_5 PFAM MaoC domain protein dehydratase - - - 0.0000000000000000000000000000000000000000000000001917 181.0
BYD1_k127_803678_6 Protein of unknown function (DUF3301) - - - 0.0000000000000000000003648 101.0
BYD1_k127_803678_7 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000335 82.0
BYD1_k127_805738_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 1.241e-237 754.0
BYD1_k127_805738_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 1.3e-206 655.0
BYD1_k127_805738_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001003 245.0
BYD1_k127_805738_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000002722 233.0
BYD1_k127_805738_4 Metal binding domain of Ada - - - 0.000000000000000000000000000000000000000000000007723 176.0
BYD1_k127_8076848_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0 1077.0
BYD1_k127_8076848_1 Belongs to the GcvT family K00315,K19191 - 1.5.3.19,1.5.8.4 8.799e-310 970.0
BYD1_k127_8076848_10 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 325.0
BYD1_k127_8076848_11 PFAM regulatory protein, MerR K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 298.0
BYD1_k127_8076848_12 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 301.0
BYD1_k127_8076848_13 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005665 295.0
BYD1_k127_8076848_14 Tryptophan-rich sensory protein K05770 - - 0.00000000000000000000000000000000000000000000000000000009152 199.0
BYD1_k127_8076848_15 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000004719 181.0
BYD1_k127_8076848_16 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000006674 162.0
BYD1_k127_8076848_17 - - - - 0.00000000000000000000000000000000006039 138.0
BYD1_k127_8076848_19 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000005631 78.0
BYD1_k127_8076848_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 1.209e-206 665.0
BYD1_k127_8076848_20 s-adenosyl-l-methionine-dependent methyltransferase - - - 0.00000000001146 76.0
BYD1_k127_8076848_21 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00001315 51.0
BYD1_k127_8076848_22 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0001564 51.0
BYD1_k127_8076848_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 5.032e-200 631.0
BYD1_k127_8076848_4 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 609.0
BYD1_k127_8076848_5 PFAM Rieske 2Fe-2S domain protein K18068 - 1.14.12.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 537.0
BYD1_k127_8076848_6 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 525.0
BYD1_k127_8076848_7 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 545.0
BYD1_k127_8076848_8 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 452.0
BYD1_k127_8076848_9 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 398.0
BYD1_k127_8088288_0 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 539.0
BYD1_k127_8088288_1 PFAM MmgE PrpD family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 522.0
BYD1_k127_8088288_10 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000003935 117.0
BYD1_k127_8088288_11 PFAM adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000627 70.0
BYD1_k127_8088288_2 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 367.0
BYD1_k127_8088288_3 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 283.0
BYD1_k127_8088288_4 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000172 277.0
BYD1_k127_8088288_5 CoA-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009025 284.0
BYD1_k127_8088288_6 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002646 263.0
BYD1_k127_8088288_7 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005956 241.0
BYD1_k127_8088288_8 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000000000001136 186.0
BYD1_k127_8088288_9 carbon monoxide dehydrogenase K09386 - - 0.000000000000000000000000000000000000000000000001643 181.0
BYD1_k127_8092103_0 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 608.0
BYD1_k127_8092103_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 566.0
BYD1_k127_8092103_10 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000000000000002008 85.0
BYD1_k127_8092103_2 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 451.0
BYD1_k127_8092103_3 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 400.0
BYD1_k127_8092103_4 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 369.0
BYD1_k127_8092103_5 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000002447 222.0
BYD1_k127_8092103_6 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000002999 186.0
BYD1_k127_8092103_7 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000005136 177.0
BYD1_k127_8092103_8 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000001126 150.0
BYD1_k127_8092103_9 lactoylglutathione lyase activity K08234 - - 0.0000000000000000000000000000000007121 137.0
BYD1_k127_8092113_0 AcrB/AcrD/AcrF family - - - 0.0 1250.0
BYD1_k127_8092113_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 436.0
BYD1_k127_8092113_10 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000004215 129.0
BYD1_k127_8092113_11 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000001302 111.0
BYD1_k127_8092113_12 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000002119 60.0
BYD1_k127_8092113_13 YCII-related domain - - - 0.0002999 44.0
BYD1_k127_8092113_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 300.0
BYD1_k127_8092113_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003619 255.0
BYD1_k127_8092113_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003305 262.0
BYD1_k127_8092113_5 Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000001264 233.0
BYD1_k127_8092113_6 Sulfatase-modifying factor enzyme 1 K11912 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000003442 248.0
BYD1_k127_8092113_7 PFAM glutathione-dependent formaldehyde-activating GFA - - - 0.000000000000000000000000000000000000000000000000000000002087 203.0
BYD1_k127_8092113_8 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000006386 166.0
BYD1_k127_8092113_9 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000000342 139.0
BYD1_k127_8111192_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 405.0
BYD1_k127_8111192_1 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 394.0
BYD1_k127_8111192_2 Domain of unknown function (DUF4439) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002286 280.0
BYD1_k127_8111192_3 Cytochrome c K08738 - - 0.00000000000000000000000000000000000002239 158.0
BYD1_k127_8111192_4 cyclic nucleotide binding K07058,K14266 - 1.14.19.9 0.00000000000000000000000000003243 122.0
BYD1_k127_8111192_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000002976 116.0
BYD1_k127_8111192_6 Protein of unknown function (DUF3750) - - - 0.00000000004536 63.0
BYD1_k127_8111192_7 Iron-binding zinc finger CDGSH type K05710 - - 0.00000000007357 65.0
BYD1_k127_8119927_0 DNA ligase K01971 - 6.5.1.1 0.0 1249.0
BYD1_k127_8119927_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1205.0
BYD1_k127_8119927_10 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000001364 212.0
BYD1_k127_8119927_11 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.0000000000000000000000000000000000000000000002374 175.0
BYD1_k127_8119927_12 Belongs to the ompA family K03286 - - 0.00000001794 65.0
BYD1_k127_8119927_2 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 602.0
BYD1_k127_8119927_3 Tripartite tricarboxylate transporter TctA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 520.0
BYD1_k127_8119927_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003482 436.0
BYD1_k127_8119927_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 415.0
BYD1_k127_8119927_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 361.0
BYD1_k127_8119927_7 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005088 347.0
BYD1_k127_8119927_8 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000113 239.0
BYD1_k127_8119927_9 Thrombospondin type 3 repeat K03286 - - 0.0000000000000000000000000000000000000000000000000000000000004438 222.0
BYD1_k127_8194057_0 Belongs to the CarB family K01955 - 6.3.5.5 4.572e-266 824.0
BYD1_k127_8194057_1 Belongs to the CarA family K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 566.0
BYD1_k127_8194057_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008328 281.0
BYD1_k127_8194057_3 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000005416 224.0
BYD1_k127_8194057_4 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000004114 173.0
BYD1_k127_8194057_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000000000000002799 136.0
BYD1_k127_8205724_0 Cytochrome b(N-terminal)/b6/petB - - - 1.014e-236 747.0
BYD1_k127_8205724_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 5.962e-198 628.0
BYD1_k127_8205724_10 PFAM Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000009764 149.0
BYD1_k127_8205724_11 Universal stress protein - - - 0.0000000000000000000000000000000002034 138.0
BYD1_k127_8205724_12 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.0000000000000000000000000000002327 128.0
BYD1_k127_8205724_13 Universal stress protein - - - 0.000000000000000000000000000248 119.0
BYD1_k127_8205724_14 Rubrerythrin - - - 0.000000000000000002236 92.0
BYD1_k127_8205724_15 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000001135 68.0
BYD1_k127_8205724_16 DnaK suppressor protein K06204 - - 0.0000003065 55.0
BYD1_k127_8205724_2 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 549.0
BYD1_k127_8205724_3 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 367.0
BYD1_k127_8205724_4 DnaJ C terminal domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 339.0
BYD1_k127_8205724_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009484 299.0
BYD1_k127_8205724_6 PFAM electron transport protein SCO1 SenC K07152 - - 0.000000000000000000000000000000000000000000000000000000000000001015 235.0
BYD1_k127_8205724_7 Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000006133 154.0
BYD1_k127_8205724_8 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000001301 164.0
BYD1_k127_8205724_9 - - - - 0.0000000000000000000000000000000000006169 141.0
BYD1_k127_8329219_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 389.0
BYD1_k127_8329219_1 PFAM dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 327.0
BYD1_k127_8329219_2 Endoribonuclease L-PSP - - - 0.00000000000000000000004123 109.0
BYD1_k127_8337238_0 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 608.0
BYD1_k127_8337238_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 445.0
BYD1_k127_8337238_2 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K05712 - 1.14.13.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 377.0
BYD1_k127_8337238_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001064 293.0
BYD1_k127_8337238_4 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000002768 266.0
BYD1_k127_8337238_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005161 263.0
BYD1_k127_8337238_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002543 235.0
BYD1_k127_8337238_7 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.000000000004038 72.0
BYD1_k127_8337238_8 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000006811 60.0
BYD1_k127_8363787_0 KaiC K08482 - - 1.553e-211 672.0
BYD1_k127_8363787_1 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 486.0
BYD1_k127_8363787_10 KaiB K08481 - - 0.00000000000000000000000000000001827 140.0
BYD1_k127_8363787_11 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain - - - 0.0000000000000007822 86.0
BYD1_k127_8363787_12 HD domain K07814 - - 0.00001516 49.0
BYD1_k127_8363787_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007451 499.0
BYD1_k127_8363787_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 449.0
BYD1_k127_8363787_4 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 349.0
BYD1_k127_8363787_5 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 302.0
BYD1_k127_8363787_6 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000001848 251.0
BYD1_k127_8363787_7 response regulator receiver K07659 - - 0.000000000000000000000000000000000000000000000000000000000000004817 220.0
BYD1_k127_8363787_8 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000001543 197.0
BYD1_k127_8363787_9 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000001178 134.0
BYD1_k127_8388834_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1304.0
BYD1_k127_8388834_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 3.453e-209 659.0
BYD1_k127_8388834_10 Pfam:UPF0118 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002731 241.0
BYD1_k127_8388834_11 Arginase family - - - 0.000000000000000000000000000000000000000000000000000000000000008642 226.0
BYD1_k127_8388834_12 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000001384 232.0
BYD1_k127_8388834_13 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000311 219.0
BYD1_k127_8388834_14 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000003413 189.0
BYD1_k127_8388834_15 Phasin protein - - - 0.0000000000000000000000000000000000000000000000000002616 193.0
BYD1_k127_8388834_16 TraB family K09973 - - 0.0000000000000000000000000000000000000000000000004168 188.0
BYD1_k127_8388834_17 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000000001249 173.0
BYD1_k127_8388834_18 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000001936 110.0
BYD1_k127_8388834_19 SPW repeat - - - 0.0000000000005119 81.0
BYD1_k127_8388834_2 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 415.0
BYD1_k127_8388834_20 Protein of unknown function (DUF3108) - - - 0.00000000002267 72.0
BYD1_k127_8388834_3 Glutaredoxin-family domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 391.0
BYD1_k127_8388834_4 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 351.0
BYD1_k127_8388834_5 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 302.0
BYD1_k127_8388834_6 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 290.0
BYD1_k127_8388834_7 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000004727 256.0
BYD1_k127_8388834_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006628 264.0
BYD1_k127_8388834_9 Ferritin-like domain K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005425 240.0
BYD1_k127_8423647_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 6.013e-265 833.0
BYD1_k127_8423647_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 587.0
BYD1_k127_8423647_2 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 424.0
BYD1_k127_8423647_3 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 391.0
BYD1_k127_8423647_4 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 344.0
BYD1_k127_8423647_5 luxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001559 248.0
BYD1_k127_8423647_6 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000001539 204.0
BYD1_k127_8423647_7 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000001076 155.0
BYD1_k127_8423647_8 TPR repeat - - - 0.000000000000000000000000003116 115.0
BYD1_k127_8423647_9 helix_turn_helix, Lux Regulon - - - 0.0001854 49.0
BYD1_k127_8492217_0 Activates fatty acids by binding to coenzyme A K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007398 527.0
BYD1_k127_8492217_1 Phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 514.0
BYD1_k127_8492217_10 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001771 270.0
BYD1_k127_8492217_11 Pfam:DUF461 K09796 - - 0.0000000000000000000000000001592 126.0
BYD1_k127_8492217_2 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 488.0
BYD1_k127_8492217_3 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 461.0
BYD1_k127_8492217_4 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 360.0
BYD1_k127_8492217_5 ABC transporter substrate-binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 352.0
BYD1_k127_8492217_6 PFAM Alcohol dehydrogenase zinc-binding domain protein K07119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 361.0
BYD1_k127_8492217_7 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 307.0
BYD1_k127_8492217_8 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 306.0
BYD1_k127_8492217_9 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001152 279.0
BYD1_k127_8496927_0 asparaginyl-tRNA synthetase K01893 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005854 528.0
BYD1_k127_8496927_1 MlaD protein K02067 - - 0.0000000000000000000000000000000000000007008 159.0
BYD1_k127_8496927_2 ABC-type transport auxiliary lipoprotein component - - - 0.00000000000000001385 94.0
BYD1_k127_849967_0 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 550.0
BYD1_k127_849967_1 2-Nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 350.0
BYD1_k127_849967_2 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 309.0
BYD1_k127_849967_3 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000001165 134.0
BYD1_k127_8555945_0 CoA binding domain K09181 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 580.0
BYD1_k127_8555945_1 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005063 254.0
BYD1_k127_8555945_2 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000002672 154.0
BYD1_k127_8555945_3 Universal stress protein - - - 0.00000000000000000000000000000000001894 140.0
BYD1_k127_8569837_0 Flavin containing amine oxidoreductase - - - 2.294e-227 725.0
BYD1_k127_8569837_1 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 503.0
BYD1_k127_8569837_10 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000001733 153.0
BYD1_k127_8569837_11 PFAM binding-protein-dependent transport systems inner membrane component K05814 - - 0.0000000000000000000004012 96.0
BYD1_k127_8569837_12 MltA-interacting MipA family protein - - - 0.0000000000005029 81.0
BYD1_k127_8569837_13 - - - - 0.00000000185 63.0
BYD1_k127_8569837_2 Glycine cleavage T-protein C-terminal barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 459.0
BYD1_k127_8569837_3 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 449.0
BYD1_k127_8569837_4 probably responsible for the translocation of the substrate across the membrane K02026,K05815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 415.0
BYD1_k127_8569837_5 multicopper oxidase type 3 K22348 - 1.16.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 377.0
BYD1_k127_8569837_6 protein deglycation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 361.0
BYD1_k127_8569837_7 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004629 279.0
BYD1_k127_8569837_8 Domain of unknown function (DUF4396) - - - 0.000000000000000000000000000000000000000000000000000000000000005046 220.0
BYD1_k127_8569837_9 Flavin containing amine oxidoreductase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000000000000000000000000000000000000924 220.0
BYD1_k127_8572466_0 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 608.0
BYD1_k127_8572466_1 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 385.0
BYD1_k127_8572466_10 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000001994 139.0
BYD1_k127_8572466_11 Protein of unknown function (DUF2782) - - - 0.000000000000000000002087 97.0
BYD1_k127_8572466_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008898 334.0
BYD1_k127_8572466_3 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005885 324.0
BYD1_k127_8572466_4 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000002809 221.0
BYD1_k127_8572466_5 import inner membrane translocase subunit Tim44 - - - 0.000000000000000000000000000000000000000000000000000002605 200.0
BYD1_k127_8572466_6 - - - - 0.000000000000000000000000000000000000000000000000001732 196.0
BYD1_k127_8572466_7 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000009762 175.0
BYD1_k127_8572466_8 HIT domain - - - 0.00000000000000000000000000000000000000163 162.0
BYD1_k127_8572466_9 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000787 160.0
BYD1_k127_8582510_0 PFAM ABC transporter K06158 - - 7.357e-204 655.0
BYD1_k127_8582510_1 VWA domain containing CoxE-like protein K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 553.0
BYD1_k127_8582510_2 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 411.0
BYD1_k127_8582510_3 Cupin domain K00450 - 1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 301.0
BYD1_k127_8582510_4 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005362 294.0
BYD1_k127_8582510_5 Fatty acid desaturase K00496 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000001216 274.0
BYD1_k127_8582510_6 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001943 268.0
BYD1_k127_8582510_7 TRAP dicarboxylate transporter, DctM subunit K11690 - - 0.00000000000000000005004 92.0
BYD1_k127_8582510_8 Domain of unknown function (DUF4184) - - - 0.0000000000000000001883 96.0
BYD1_k127_8594148_0 Aldehyde oxidase and xanthine dehydrogenase K03520 - 1.2.5.3 1.584e-277 870.0
BYD1_k127_8594148_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 612.0
BYD1_k127_8594148_10 Protein of unknown function (DUF1272) K09984 - - 0.000000000000000000000000000000000003744 138.0
BYD1_k127_8594148_2 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 419.0
BYD1_k127_8594148_3 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 396.0
BYD1_k127_8594148_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 400.0
BYD1_k127_8594148_5 histidine kinase HAMP region domain protein K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 351.0
BYD1_k127_8594148_6 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009122 267.0
BYD1_k127_8594148_7 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000008566 240.0
BYD1_k127_8594148_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000008931 196.0
BYD1_k127_8594148_9 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 - 2.7.7.76 0.0000000000000000000000000000000000000000000005397 183.0
BYD1_k127_8608100_0 elongation factor G K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001841 576.0
BYD1_k127_8608100_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 364.0
BYD1_k127_8608100_2 GDP-mannose 4,6 dehydratase K18981 - 1.1.1.203 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005713 284.0
BYD1_k127_8608100_3 alpha, beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005785 270.0
BYD1_k127_8608100_4 FCD - - - 0.00000000000000000000000000000000000001183 149.0
BYD1_k127_8608100_5 amidohydrolase 2 K18982 - 5.4.1.4 0.00000309 60.0
BYD1_k127_8615567_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000879 552.0
BYD1_k127_8615567_1 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 354.0
BYD1_k127_8615567_2 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000006697 148.0
BYD1_k127_8615567_3 Thioesterase superfamily - - - 0.0000000000000000000000000000000000002054 143.0
BYD1_k127_8616040_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 3.033e-265 822.0
BYD1_k127_8616040_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 1.183e-198 625.0
BYD1_k127_8616040_2 membrane-bound metal-dependent K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 329.0
BYD1_k127_8616040_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006443 285.0
BYD1_k127_8616040_4 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000354 257.0
BYD1_k127_8616040_5 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000001931 186.0
BYD1_k127_8616040_6 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000001744 64.0
BYD1_k127_8618734_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 1.118e-252 802.0
BYD1_k127_8618734_1 Isocitrate lyase K01637 - 4.1.3.1 6.471e-226 706.0
BYD1_k127_8618734_10 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000001944 90.0
BYD1_k127_8618734_11 Belongs to the UPF0235 family K09131 - - 0.00000000000000002398 86.0
BYD1_k127_8618734_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 3.433e-199 644.0
BYD1_k127_8618734_3 twitching motility protein K02670 - - 6.832e-198 621.0
BYD1_k127_8618734_4 twitching motility protein K02669 - - 7.654e-197 617.0
BYD1_k127_8618734_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 464.0
BYD1_k127_8618734_6 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003522 272.0
BYD1_k127_8618734_7 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000006416 241.0
BYD1_k127_8618734_8 Rod shape-determining protein mreD K03571 - - 0.00000000000000000000000000000000000000001443 158.0
BYD1_k127_8618734_9 integral membrane protein K02221 - - 0.0000000000000000000000000000000000004393 151.0
BYD1_k127_8653756_0 AcrB/AcrD/AcrF family K18138 - - 4.832e-194 614.0
BYD1_k127_8653756_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18145 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 346.0
BYD1_k127_8653756_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000007634 259.0
BYD1_k127_8653756_3 Transcriptional regulator, TetR family - - - 0.000000000008738 73.0
BYD1_k127_86681_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.0 1029.0
BYD1_k127_86681_1 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 382.0
BYD1_k127_86681_10 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.000629 51.0
BYD1_k127_86681_2 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000005797 246.0
BYD1_k127_86681_3 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000005548 223.0
BYD1_k127_86681_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000969 220.0
BYD1_k127_86681_5 Binding-protein-dependent transport system inner membrane component K02050,K15552 - - 0.00000000000000000000000000000000000000000000001659 190.0
BYD1_k127_86681_6 ABC-type nitrate sulfonate bicarbonate transport system permease component K15554 - - 0.000000000000000000000000000000000000000000001174 178.0
BYD1_k127_86681_7 Endoribonuclease L-PSP. Source PGD - - - 0.00000000000000000000000000000005682 141.0
BYD1_k127_86681_8 Protein of unknown function (DUF2795) - - - 0.00000000000003877 74.0
BYD1_k127_86681_9 - - - - 0.000000003118 68.0
BYD1_k127_8691433_0 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 2.74e-214 688.0
BYD1_k127_8691433_1 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 556.0
BYD1_k127_8691433_2 - - - - 0.00000000000000000000000000000000000000000000000000000000001773 221.0
BYD1_k127_8691433_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000001265 175.0
BYD1_k127_8691433_4 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000001584 156.0
BYD1_k127_8691433_5 Belongs to the peptidase M48B family K03799 - - 0.000000000000001825 77.0
BYD1_k127_8691433_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000009803 67.0
BYD1_k127_8720354_0 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 352.0
BYD1_k127_8720354_1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000009383 271.0
BYD1_k127_8720354_2 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002306 267.0
BYD1_k127_8720354_3 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001222 241.0
BYD1_k127_8720354_4 KR domain K13774 - - 0.0000000000000000000000000000000000000000000000000000000000225 213.0
BYD1_k127_8720354_5 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000007555 141.0
BYD1_k127_8720354_6 TfoX N-terminal domain - - - 0.000000000000000000000000000003289 129.0
BYD1_k127_8720354_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000002524 83.0
BYD1_k127_8744049_0 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 382.0
BYD1_k127_8744049_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 346.0
BYD1_k127_8744049_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 304.0
BYD1_k127_8744049_3 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007722 302.0
BYD1_k127_8744049_4 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009271 272.0
BYD1_k127_8744049_5 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001115 265.0
BYD1_k127_8744049_6 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000005506 123.0
BYD1_k127_8744049_7 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000009735 98.0
BYD1_k127_8807248_0 DEAD DEAH box helicase K03724 - - 0.0 1446.0
BYD1_k127_8807248_1 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 5.296e-219 686.0
BYD1_k127_8807248_2 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 557.0
BYD1_k127_8807248_3 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 370.0
BYD1_k127_8807248_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001003 294.0
BYD1_k127_8807248_5 FtsJ-like methyltransferase K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000146 215.0
BYD1_k127_8807248_6 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000001655 136.0
BYD1_k127_8807248_7 RNA-binding protein, YhbY family K07574 - - 0.000000000000000000003628 95.0
BYD1_k127_881189_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 505.0
BYD1_k127_881189_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 477.0
BYD1_k127_881189_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 409.0
BYD1_k127_881189_3 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007319 391.0
BYD1_k127_881189_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000003202 245.0
BYD1_k127_881189_5 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000001485 86.0
BYD1_k127_8834676_0 Dehydrogenase K00382 - 1.8.1.4 8.669e-264 822.0
BYD1_k127_8834676_1 peptidase, M20 - - - 1.334e-196 627.0
BYD1_k127_8834676_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008226 603.0
BYD1_k127_8834676_3 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 476.0
BYD1_k127_8834676_4 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 296.0
BYD1_k127_8834676_5 D-galactarate dehydratase / Altronate hydrolase, C terminus K01685 - 4.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 285.0
BYD1_k127_8834676_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008569 288.0
BYD1_k127_8834676_7 RNA methyltransferase K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000007845 210.0
BYD1_k127_8834676_8 Domain of unknown function (DUF4126) - - - 0.00000000000000000000000000000000000000000000000000175 195.0
BYD1_k127_8834676_9 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000000000001675 166.0
BYD1_k127_8847564_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 4.566e-203 638.0
BYD1_k127_8847564_1 PFAM AFG1-family ATPase K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 441.0
BYD1_k127_8847564_2 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 436.0
BYD1_k127_8847564_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 422.0
BYD1_k127_8847677_0 Receptor family ligand binding region - - - 3.384e-200 628.0
BYD1_k127_8847677_1 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000729 427.0
BYD1_k127_8847677_2 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 405.0
BYD1_k127_8847677_3 ATPases associated with a variety of cellular activities K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 353.0
BYD1_k127_8847677_4 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000249 245.0
BYD1_k127_8847677_5 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000000000003389 207.0
BYD1_k127_8847677_6 lytic transglycosylase activity - - - 0.00000000000000000000000000000000000000000000005994 177.0
BYD1_k127_8858999_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 5.706e-217 686.0
BYD1_k127_8858999_1 Protein of unknown function (DUF3604) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 558.0
BYD1_k127_8858999_10 dioxygenase activity K00477 - 1.14.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 422.0
BYD1_k127_8858999_11 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008804 416.0
BYD1_k127_8858999_12 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 396.0
BYD1_k127_8858999_13 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 397.0
BYD1_k127_8858999_14 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 382.0
BYD1_k127_8858999_15 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004976 377.0
BYD1_k127_8858999_16 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 369.0
BYD1_k127_8858999_17 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 345.0
BYD1_k127_8858999_18 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002201 363.0
BYD1_k127_8858999_19 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 319.0
BYD1_k127_8858999_2 TRAP dicarboxylate transporter, DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002012 548.0
BYD1_k127_8858999_20 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 310.0
BYD1_k127_8858999_21 Arylsulfotransferase (ASST) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 311.0
BYD1_k127_8858999_22 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001162 287.0
BYD1_k127_8858999_23 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004408 270.0
BYD1_k127_8858999_24 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008425 284.0
BYD1_k127_8858999_25 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008986 258.0
BYD1_k127_8858999_26 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K01856 - 5.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000915 273.0
BYD1_k127_8858999_27 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001428 241.0
BYD1_k127_8858999_28 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000000000000000000000305 236.0
BYD1_k127_8858999_29 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000005432 172.0
BYD1_k127_8858999_3 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 529.0
BYD1_k127_8858999_30 Protein of unknown function (DUF1328) - - - 0.000000000005436 67.0
BYD1_k127_8858999_31 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000001146 68.0
BYD1_k127_8858999_4 Amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 522.0
BYD1_k127_8858999_5 Cobalamin-independent synthase, Catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 511.0
BYD1_k127_8858999_6 Ketopantoate hydroxymethyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 505.0
BYD1_k127_8858999_7 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 486.0
BYD1_k127_8858999_8 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002403 462.0
BYD1_k127_8858999_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 432.0
BYD1_k127_8885355_0 TIGRFAM malate synthase A K01638 - 2.3.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 604.0
BYD1_k127_8885355_1 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 558.0
BYD1_k127_8885355_2 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 378.0
BYD1_k127_8885355_3 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 362.0
BYD1_k127_8885355_4 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000002548 128.0
BYD1_k127_8885355_5 - - - - 0.000000000002123 77.0
BYD1_k127_8917252_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 518.0
BYD1_k127_8917252_1 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000679 365.0
BYD1_k127_8917252_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008892 346.0
BYD1_k127_8917252_3 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000000000000005048 211.0
BYD1_k127_8917252_4 - - - - 0.0000000000000000000000000000000000000000000001202 178.0
BYD1_k127_8917252_5 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000000333 166.0
BYD1_k127_894647_0 GTP-binding protein TypA K06207 - - 2.858e-306 948.0
BYD1_k127_894647_1 NlpC/P60 family K19303 - - 0.0000000000000000000000000007599 121.0
BYD1_k127_894647_2 Flavin containing amine oxidoreductase - - - 0.000000000001341 68.0
BYD1_k127_8956928_0 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0 1043.0
BYD1_k127_8956928_1 2-aminobenzoate-CoA ligase K08295 - 6.2.1.32 9.233e-224 708.0
BYD1_k127_8956928_10 PFAM regulatory protein, MarR - - - 0.0000000000000000000000000000000000000000000000000001869 189.0
BYD1_k127_8956928_11 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000001235 183.0
BYD1_k127_8956928_12 ACT domain - - - 0.0000000000000000000000000000001845 128.0
BYD1_k127_8956928_13 Ring hydroxylating subunit beta family protein 1 - - - 0.000000000000000000000000000005656 126.0
BYD1_k127_8956928_14 helix_turn_helix multiple antibiotic resistance protein K06075 - - 0.0000000004356 64.0
BYD1_k127_8956928_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 520.0
BYD1_k127_8956928_3 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 449.0
BYD1_k127_8956928_4 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009084 422.0
BYD1_k127_8956928_5 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 404.0
BYD1_k127_8956928_6 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 400.0
BYD1_k127_8956928_7 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 394.0
BYD1_k127_8956928_8 Dehydrogenase K15054 - 1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006961 345.0
BYD1_k127_8956928_9 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000001203 226.0
BYD1_k127_8985573_0 4Fe-4S dicluster domain - - - 1.89e-246 795.0
BYD1_k127_8985573_1 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 597.0
BYD1_k127_9058334_0 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000004142 260.0
BYD1_k127_9058334_1 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000001855 101.0
BYD1_k127_9058334_2 electron transfer activity K03737,K05337 - 1.2.7.1 0.0002261 54.0
BYD1_k127_9073630_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046906,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.0 1580.0
BYD1_k127_9073630_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 4.53e-273 854.0
BYD1_k127_9073630_10 Protein of unknown function (DUF2892) - - - 0.00000000005991 66.0
BYD1_k127_9073630_11 - - - - 0.0004317 43.0
BYD1_k127_9073630_2 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 550.0
BYD1_k127_9073630_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 458.0
BYD1_k127_9073630_4 pyrroloquinoline quinone binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 339.0
BYD1_k127_9073630_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 316.0
BYD1_k127_9073630_6 PFAM class II aldolase adducin family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 295.0
BYD1_k127_9073630_7 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000004548 238.0
BYD1_k127_9073630_8 amino acid K01995 - - 0.0000000000000000000000000000000000000000000000000000002988 211.0
BYD1_k127_9073630_9 pyridoxamine 5-phosphate - - - 0.000000000000000000000000000000000002538 148.0
BYD1_k127_9079120_0 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 476.0
BYD1_k127_9079120_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008514 295.0
BYD1_k127_9079120_2 Mg2 and Co2 transporter CorC K06189 - - 0.00000000000001496 74.0
BYD1_k127_9084075_0 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009448 403.0
BYD1_k127_9084075_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 320.0
BYD1_k127_9084075_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000135 216.0
BYD1_k127_9084075_3 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000006434 192.0
BYD1_k127_9111082_0 COG1960 Acyl-CoA dehydrogenases K20035 - - 1.076e-236 745.0
BYD1_k127_9111082_1 CoA binding domain - - - 1.039e-228 727.0
BYD1_k127_9111082_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 522.0
BYD1_k127_9111082_3 Electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 437.0
BYD1_k127_9111082_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K20034 - 6.2.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 451.0
BYD1_k127_9111082_5 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 435.0
BYD1_k127_9111082_6 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 398.0
BYD1_k127_9111082_7 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 325.0
BYD1_k127_9111082_8 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001346 263.0
BYD1_k127_9111082_9 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000008764 250.0
BYD1_k127_9171699_0 Response regulator receiver K07675 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 408.0
BYD1_k127_9171699_1 Right handed beta helix region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 313.0
BYD1_k127_9171699_2 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001769 289.0
BYD1_k127_9171699_3 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000954 246.0
BYD1_k127_9171699_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000002071 162.0
BYD1_k127_9171699_5 Belongs to the peptidase S8 family - - - 0.000000000000000000003494 110.0
BYD1_k127_9309376_0 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 8.144e-197 623.0
BYD1_k127_9309376_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 614.0
BYD1_k127_9309376_10 Protein of unknown function (DUF2848) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001133 263.0
BYD1_k127_9309376_11 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000009068 184.0
BYD1_k127_9309376_12 Pyridoxamine 5'-phosphate oxidase like - - - 0.000000000000000000000000000000000000000001421 160.0
BYD1_k127_9309376_2 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 522.0
BYD1_k127_9309376_3 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 425.0
BYD1_k127_9309376_4 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 418.0
BYD1_k127_9309376_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 397.0
BYD1_k127_9309376_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 360.0
BYD1_k127_9309376_7 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 312.0
BYD1_k127_9309376_8 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 314.0
BYD1_k127_9309376_9 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 323.0
BYD1_k127_9316846_0 Amidohydrolase family - - - 1.826e-218 690.0
BYD1_k127_9316846_1 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000001367 156.0
BYD1_k127_9316846_2 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.000002566 51.0
BYD1_k127_9339144_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 2.987e-206 648.0
BYD1_k127_9339144_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 552.0
BYD1_k127_9339144_10 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 405.0
BYD1_k127_9339144_11 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 409.0
BYD1_k127_9339144_12 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 395.0
BYD1_k127_9339144_13 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 400.0
BYD1_k127_9339144_14 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 378.0
BYD1_k127_9339144_15 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 374.0
BYD1_k127_9339144_16 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 364.0
BYD1_k127_9339144_17 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 345.0
BYD1_k127_9339144_18 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 330.0
BYD1_k127_9339144_19 Glutathione S-transferase K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 326.0
BYD1_k127_9339144_2 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 554.0
BYD1_k127_9339144_20 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 311.0
BYD1_k127_9339144_21 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005382 282.0
BYD1_k127_9339144_22 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001247 291.0
BYD1_k127_9339144_23 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003972 268.0
BYD1_k127_9339144_24 VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006753 256.0
BYD1_k127_9339144_25 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000001013 251.0
BYD1_k127_9339144_26 Cytochrome C1 K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009534 266.0
BYD1_k127_9339144_27 PFAM regulatory protein AsnC Lrp family K03719 GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000101 211.0
BYD1_k127_9339144_28 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000002056 222.0
BYD1_k127_9339144_29 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000008929 217.0
BYD1_k127_9339144_3 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 533.0
BYD1_k127_9339144_30 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000704 192.0
BYD1_k127_9339144_31 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000001193 180.0
BYD1_k127_9339144_32 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000000000000000000000004503 171.0
BYD1_k127_9339144_33 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000002122 160.0
BYD1_k127_9339144_34 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000007284 134.0
BYD1_k127_9339144_35 cold-shock protein K03704 - - 0.000000000000000000000000000003063 120.0
BYD1_k127_9339144_36 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000003636 115.0
BYD1_k127_9339144_37 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000001412 113.0
BYD1_k127_9339144_38 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000001606 104.0
BYD1_k127_9339144_39 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000001009 96.0
BYD1_k127_9339144_4 Belongs to the peptidase S1C family K04691,K04772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 485.0
BYD1_k127_9339144_40 - - - - 0.00000000000001204 83.0
BYD1_k127_9339144_5 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 492.0
BYD1_k127_9339144_6 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 479.0
BYD1_k127_9339144_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 447.0
BYD1_k127_9339144_8 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 432.0
BYD1_k127_9339144_9 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 402.0
BYD1_k127_9366958_0 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 6.89e-247 769.0
BYD1_k127_9366958_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 448.0
BYD1_k127_9366958_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 336.0
BYD1_k127_9366958_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001046 301.0
BYD1_k127_9366958_4 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009437 295.0
BYD1_k127_9366958_5 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000001214 216.0
BYD1_k127_9366958_6 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000003513 168.0
BYD1_k127_9366958_7 Domain of unknown function (DUF4124) - - - 0.0000000000001833 76.0
BYD1_k127_9554420_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1163.0
BYD1_k127_9554420_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 2.476e-280 877.0
BYD1_k127_9554420_10 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000002293 140.0
BYD1_k127_9554420_11 HNH nucleases - - - 0.00000000000000000000000000000003528 139.0
BYD1_k127_9554420_12 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000003095 97.0
BYD1_k127_9554420_13 Transcriptional regulator - - - 0.0000000000002271 77.0
BYD1_k127_9554420_2 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 568.0
BYD1_k127_9554420_3 Taurine catabolism dioxygenase TauD, TfdA family K22303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 431.0
BYD1_k127_9554420_4 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 360.0
BYD1_k127_9554420_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 352.0
BYD1_k127_9554420_6 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002355 275.0
BYD1_k127_9554420_7 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000539 270.0
BYD1_k127_9554420_8 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000002576 208.0
BYD1_k127_9554420_9 NUDIX domain - - - 0.000000000000000000000000000000000000000000005162 168.0
BYD1_k127_9586206_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 602.0
BYD1_k127_9586206_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 327.0
BYD1_k127_9586206_2 - - - - 0.0000000000000000000000000000000000000000000006728 170.0
BYD1_k127_9586206_3 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000006818 135.0
BYD1_k127_9649986_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 601.0
BYD1_k127_9649986_1 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005264 261.0
BYD1_k127_9649986_2 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000000000000003048 217.0
BYD1_k127_9649986_3 OsmC-like protein - - - 0.000000000000000000000000000000007505 128.0
BYD1_k127_9649986_4 dmso reductase anchor subunit K18363 - - 0.0000000000000000000004984 101.0
BYD1_k127_9649986_5 Hemerythrin HHE cation binding domain - - - 0.0000000000000000003293 95.0
BYD1_k127_9652430_0 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K01685,K01708,K16846 - 4.2.1.42,4.2.1.7,4.4.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 487.0
BYD1_k127_9652430_1 Dehydratase family K13875 - 4.2.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005735 439.0
BYD1_k127_9669502_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1615.0
BYD1_k127_9669502_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004095 339.0
BYD1_k127_9669502_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009532 246.0
BYD1_k127_9669502_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001999 245.0
BYD1_k127_9669502_4 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000000000000000000000000000000000000002866 216.0
BYD1_k127_9669502_5 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000001901 164.0
BYD1_k127_9699916_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 3.009e-237 766.0
BYD1_k127_9699916_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 560.0
BYD1_k127_9699916_2 WHG domain - - - 0.0000000000000000000000000000000000000007284 154.0
BYD1_k127_9699916_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000007573 149.0
BYD1_k127_9699916_4 Predicted membrane protein (DUF2306) - - - 0.00000000000000000000002415 105.0
BYD1_k127_9725104_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 1.748e-299 933.0
BYD1_k127_9725104_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 479.0
BYD1_k127_9725104_10 Domain of unknown function (DUF1989) K09967 - - 0.00000000000000000000000000000000000000000000000000000000000000005995 227.0
BYD1_k127_9725104_11 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000003111 233.0
BYD1_k127_9725104_12 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000005034 221.0
BYD1_k127_9725104_13 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000001471 178.0
BYD1_k127_9725104_14 PFAM Dimethylmenaquinone methyltransferase - - - 0.00000000000000000000000000000000000000000002647 169.0
BYD1_k127_9725104_15 Transglycosylase associated protein - - - 0.000000000000000000000000000000000000000007704 154.0
BYD1_k127_9725104_16 Metal binding domain of Ada K10778 - 2.1.1.63 0.000000000000000000000000000000000001256 147.0
BYD1_k127_9725104_17 Adenylate cyclase - - - 0.00000000000000000000000000000008277 130.0
BYD1_k127_9725104_18 Domain of unknown function (DUF3597) - - - 0.0000000000000000000000000000009682 126.0
BYD1_k127_9725104_19 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000001509 108.0
BYD1_k127_9725104_2 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 359.0
BYD1_k127_9725104_20 two-component response regulator - - - 0.000000000000000000000002571 108.0
BYD1_k127_9725104_21 Transcriptional regulator - - - 0.00000000000000000002306 98.0
BYD1_k127_9725104_22 Bacterial protein of unknown function (DUF937) - - - 0.000000002413 61.0
BYD1_k127_9725104_3 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 346.0
BYD1_k127_9725104_4 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002975 305.0
BYD1_k127_9725104_5 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 301.0
BYD1_k127_9725104_6 Beta-lactamase enzyme family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002104 284.0
BYD1_k127_9725104_7 Stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004032 265.0
BYD1_k127_9725104_8 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000382 256.0
BYD1_k127_9725104_9 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000001413 237.0
BYD1_k127_9783952_0 FtsX-like permease family K02004 - - 4.976e-224 728.0
BYD1_k127_9783952_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 387.0
BYD1_k127_9783952_10 Domain of unknown function (DUF4124) - - - 0.0000000306 63.0
BYD1_k127_9783952_11 Tetratricopeptide TPR_2 repeat protein - - - 0.000273 52.0
BYD1_k127_9783952_12 dienelactone hydrolase K21104 - 3.1.1.101 0.0003993 52.0
BYD1_k127_9783952_2 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 379.0
BYD1_k127_9783952_3 Thioredoxin-like K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 332.0
BYD1_k127_9783952_4 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 331.0
BYD1_k127_9783952_5 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001579 286.0
BYD1_k127_9783952_6 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001166 281.0
BYD1_k127_9783952_7 Solute carrier family 35 - - - 0.00000000000000000000000000000000000000000000000000000007573 207.0
BYD1_k127_9783952_8 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000281 183.0
BYD1_k127_9783952_9 Rubrerythrin - - - 0.000000001998 65.0
BYD1_k127_9805735_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1347.0
BYD1_k127_9805735_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1082.0
BYD1_k127_9805735_10 - - - - 0.00000000000000000000000000000000000000001002 172.0
BYD1_k127_9805735_11 FixH K09926 - - 0.0000000000000000000000000000000000000004319 153.0
BYD1_k127_9805735_12 methyltransferase - - - 0.000000000000000000000000000000000001479 146.0
BYD1_k127_9805735_13 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.00000000000000000000000000000331 125.0
BYD1_k127_9805735_14 - - - - 0.000000000000000000000002018 108.0
BYD1_k127_9805735_15 - - - - 0.00000000000007929 75.0
BYD1_k127_9805735_16 Protein of unknown function (DUF2892) - - - 0.0000000000003827 81.0
BYD1_k127_9805735_17 Double zinc ribbon - - - 0.000000002535 59.0
BYD1_k127_9805735_2 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 530.0
BYD1_k127_9805735_3 iron-sulfur 4fe-4s ferredoxin transmembrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 467.0
BYD1_k127_9805735_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 415.0
BYD1_k127_9805735_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 355.0
BYD1_k127_9805735_6 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000002547 230.0
BYD1_k127_9805735_7 Flavodoxin-like fold - - - 0.00000000000000000000000000000000000000000000000000000000000007153 220.0
BYD1_k127_9805735_8 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000001053 172.0
BYD1_k127_9805735_9 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000001135 169.0
BYD1_k127_9826978_0 PFAM amidohydrolase K01464,K01466 - 3.5.2.2,3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 612.0
BYD1_k127_9826978_1 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 573.0
BYD1_k127_9826978_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 363.0
BYD1_k127_9826978_3 Isocitrate lyase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 361.0
BYD1_k127_9826978_4 amino acid K01996,K11958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 323.0
BYD1_k127_9826978_5 PFAM ABC transporter related K01995,K10822 - 3.6.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 335.0
BYD1_k127_9826978_6 Belongs to the LeuD family K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000142 180.0
BYD1_k127_9842644_0 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 551.0
BYD1_k127_9842644_1 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 531.0
BYD1_k127_9842644_2 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000031 512.0
BYD1_k127_9842644_3 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 351.0
BYD1_k127_9842644_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006881 295.0
BYD1_k127_9842644_5 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000002157 250.0
BYD1_k127_9842644_6 protocatechuate 3,4-dioxygenase, beta subunit K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000006461 222.0
BYD1_k127_9842644_7 protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.0000000000000000000000000000000000000001316 158.0
BYD1_k127_9842644_8 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000009187 138.0
BYD1_k127_9860368_0 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 3.525e-303 944.0
BYD1_k127_9860368_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003319 279.0
BYD1_k127_9860368_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001121 282.0
BYD1_k127_9860368_3 serine threonine protein kinase K11912,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000294 237.0
BYD1_k127_9860368_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000142 127.0
BYD1_k127_9860368_5 peptidyl-tyrosine sulfation - - - 0.0000000000000000005479 93.0
BYD1_k127_9860368_6 PFAM Hpt domain protein - - - 0.000000000000000008577 87.0
BYD1_k127_986808_0 RQC K03654 - 3.6.4.12 8.304e-252 795.0
BYD1_k127_986808_1 Belongs to the ABC transporter superfamily K13896 - - 2.462e-222 706.0
BYD1_k127_986808_10 of the double-stranded beta helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004659 276.0
BYD1_k127_986808_11 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000326 273.0
BYD1_k127_986808_12 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000748 273.0
BYD1_k127_986808_13 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003054 246.0
BYD1_k127_986808_14 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000005885 224.0
BYD1_k127_986808_15 - - - - 0.00000000000000000000000000000006841 128.0
BYD1_k127_986808_16 SMART Cold shock protein K03704 - - 0.000000000000000000000000000002117 122.0
BYD1_k127_986808_2 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 518.0
BYD1_k127_986808_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 475.0
BYD1_k127_986808_4 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 366.0
BYD1_k127_986808_5 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 347.0
BYD1_k127_986808_6 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 329.0
BYD1_k127_986808_7 metal-dependent hydrolase of the TIM-barrel fold K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 315.0
BYD1_k127_986808_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005978 306.0
BYD1_k127_986808_9 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 299.0
BYD1_k127_9938860_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 534.0
BYD1_k127_9938860_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 423.0
BYD1_k127_9938860_2 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000584 370.0
BYD1_k127_9938860_3 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002407 291.0
BYD1_k127_9938860_4 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000004331 239.0
BYD1_k127_9938860_5 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000006991 239.0
BYD1_k127_9938860_6 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051186,GO:0051596,GO:0061727,GO:0071704,GO:1901564,GO:1901575,GO:1901615 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000107 210.0
BYD1_k127_9938860_7 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000001799 181.0
BYD1_k127_9938860_8 Organic solvent tolerance protein K04744 - - 0.000000000000006484 77.0
BYD1_k127_9949782_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 546.0
BYD1_k127_9949782_1 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 525.0
BYD1_k127_9949782_2 Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P K00847,K00884 GO:0003674,GO:0003824,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019200,GO:0019318,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046835,GO:0071704 2.7.1.4,2.7.1.59 0.00000000000000000000000000000000000000000000000000000000000000000005647 234.0
BYD1_k127_9949782_3 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000000000003147 209.0
BYD1_k127_9949782_4 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000006396 214.0
BYD1_k127_997898_0 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 1.677e-208 664.0
BYD1_k127_997898_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007225 589.0
BYD1_k127_997898_10 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 346.0
BYD1_k127_997898_11 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 362.0
BYD1_k127_997898_12 Trap-type c4-dicarboxylate transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000002994 232.0
BYD1_k127_997898_13 FCD - - - 0.000000000000000000000000000000000000000000000000000000000001684 217.0
BYD1_k127_997898_14 ChrR Cupin-like domain - - - 0.000000000000000000000000000000000000000000000003132 178.0
BYD1_k127_997898_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000295 178.0
BYD1_k127_997898_16 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000008517 147.0
BYD1_k127_997898_17 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000001575 63.0
BYD1_k127_997898_2 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 571.0
BYD1_k127_997898_3 Protein of unknown function (DUF993) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 540.0
BYD1_k127_997898_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 509.0
BYD1_k127_997898_5 Mandelate Racemase Muconate Lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 507.0
BYD1_k127_997898_6 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 473.0
BYD1_k127_997898_7 PFAM SMP-30 Gluconolaconase LRE domain protein K01053,K14274 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 451.0
BYD1_k127_997898_8 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 396.0
BYD1_k127_997898_9 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006162 377.0