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Overview

ID MAG00006
Name BYD1_bin.15
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Steroidobacterales
Family Steroidobacteraceae
Genus SCUD01
Species
Assembly information
Completeness (%) 99.66
Contamination (%) 1.92
GC content (%) 70.0
N50 (bp) 50,536
Genome size (bp) 3,009,677

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2724

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10044059_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2040.0
BYD1_k127_10044059_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 344.0
BYD1_k127_10044059_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009241 302.0
BYD1_k127_10044059_3 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005201 293.0
BYD1_k127_10044059_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000002121 231.0
BYD1_k127_10044059_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000005222 211.0
BYD1_k127_10044059_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.000000000000000000000000000000000000002525 152.0
BYD1_k127_10044059_7 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000000000003489 111.0
BYD1_k127_10044059_8 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000003667 78.0
BYD1_k127_10044059_9 recombinase activity - - - 0.000003562 53.0
BYD1_k127_10114662_0 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 577.0
BYD1_k127_10114662_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 409.0
BYD1_k127_10114662_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000005447 240.0
BYD1_k127_10114662_11 probably involved in intracellular septation K06190 - - 0.000000000000000000000000000000000000000000000000000003776 198.0
BYD1_k127_10114662_12 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000001344 181.0
BYD1_k127_10114662_13 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000001595 160.0
BYD1_k127_10114662_14 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000375 93.0
BYD1_k127_10114662_2 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 376.0
BYD1_k127_10114662_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 358.0
BYD1_k127_10114662_4 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 317.0
BYD1_k127_10114662_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 328.0
BYD1_k127_10114662_6 PFAM Short-chain dehydrogenase reductase SDR - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002792 260.0
BYD1_k127_10114662_7 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004171 253.0
BYD1_k127_10114662_8 HAD-hyrolase-like K01091,K22292 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006040,GO:0006082,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009254,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019752,GO:0030203,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097172,GO:1901135,GO:1901360,GO:1901564 3.1.3.105,3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000004511 252.0
BYD1_k127_10114662_9 Peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000009961 228.0
BYD1_k127_10283492_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 3.296e-225 724.0
BYD1_k127_10283492_1 Belongs to the RtcB family K14415 - 6.5.1.3 1.138e-218 690.0
BYD1_k127_10283492_10 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 359.0
BYD1_k127_10283492_11 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 335.0
BYD1_k127_10283492_12 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 323.0
BYD1_k127_10283492_13 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 331.0
BYD1_k127_10283492_14 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002555 258.0
BYD1_k127_10283492_15 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000000003529 207.0
BYD1_k127_10283492_16 Protein of unknown function (DUF1318) - - - 0.000000000000000000000000000000000000000000000000000000045 204.0
BYD1_k127_10283492_17 Glycine zipper - - - 0.00000000000000000000000000000000000000000000000002249 199.0
BYD1_k127_10283492_18 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000001365 188.0
BYD1_k127_10283492_19 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000007358 168.0
BYD1_k127_10283492_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 588.0
BYD1_k127_10283492_20 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000489 155.0
BYD1_k127_10283492_21 Archease protein family (MTH1598/TM1083) - - - 0.00000000000000000000000000000000000000005053 165.0
BYD1_k127_10283492_22 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.00000000000000000000000000000000000001189 155.0
BYD1_k127_10283492_23 receiver - - - 0.0000000000000000000000000000000000000184 161.0
BYD1_k127_10283492_24 Transcriptional regulator - - - 0.00000000000000000000000000000000000006997 145.0
BYD1_k127_10283492_25 YCII-related domain - - - 0.000000000000000000000000000000002352 143.0
BYD1_k127_10283492_26 PFAM Cold-shock protein, DNA-binding - - - 0.00000000000000000000000000002769 123.0
BYD1_k127_10283492_27 YCII-related domain - - - 0.00000000000000000000000009825 111.0
BYD1_k127_10283492_28 IMP dehydrogenase activity - - - 0.00000000000000000002602 100.0
BYD1_k127_10283492_29 signal transduction protein with EFhand domain - - - 0.0000000005318 65.0
BYD1_k127_10283492_3 Major Facilitator Superfamily K08167 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 571.0
BYD1_k127_10283492_30 Sporulation related domain - - - 0.000001496 59.0
BYD1_k127_10283492_4 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 484.0
BYD1_k127_10283492_5 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 479.0
BYD1_k127_10283492_6 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 451.0
BYD1_k127_10283492_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 434.0
BYD1_k127_10283492_8 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 403.0
BYD1_k127_10283492_9 Saccharopine dehydrogenase NADP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 382.0
BYD1_k127_10643830_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 490.0
BYD1_k127_10643830_1 Belongs to the CarA family K01956 GO:0000050,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005951,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0019627,GO:0019752,GO:0032991,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000003613 261.0
BYD1_k127_10643830_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000001265 241.0
BYD1_k127_10643830_3 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000001044 196.0
BYD1_k127_10665551_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 6.704e-230 717.0
BYD1_k127_10665551_1 COG1622 Heme copper-type cytochrome quinol oxidases, subunit 2 K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 583.0
BYD1_k127_10665551_10 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000001852 218.0
BYD1_k127_10665551_11 - - - - 0.0000000000000000000000000000000000000000000000000000004288 198.0
BYD1_k127_10665551_12 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000002059 201.0
BYD1_k127_10665551_13 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000007396 203.0
BYD1_k127_10665551_14 - - - - 0.00000000000000000000000000000000000000000000006062 177.0
BYD1_k127_10665551_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000073 181.0
BYD1_k127_10665551_16 - - - - 0.00000000000000000000000000000000003265 142.0
BYD1_k127_10665551_17 DoxX family K15977 - - 0.0000000000000000000000000000000001778 136.0
BYD1_k127_10665551_18 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000002142 138.0
BYD1_k127_10665551_19 Protein of unknown function (DUF1272) - - - 0.000000000000000000002101 98.0
BYD1_k127_10665551_2 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 518.0
BYD1_k127_10665551_21 - - - - 0.000000000000002581 81.0
BYD1_k127_10665551_3 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 390.0
BYD1_k127_10665551_4 Extradiol ring-cleavage dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 348.0
BYD1_k127_10665551_5 POTRA domain TamA domain 1 K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 333.0
BYD1_k127_10665551_6 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 312.0
BYD1_k127_10665551_7 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001376 268.0
BYD1_k127_10665551_8 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000002661 259.0
BYD1_k127_10665551_9 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000002487 257.0
BYD1_k127_10842195_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1547.0
BYD1_k127_10842195_1 TonB dependent receptor K02014 - - 1.015e-314 979.0
BYD1_k127_10842195_10 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 393.0
BYD1_k127_10842195_11 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019897,GO:0019898,GO:0031224,GO:0031226,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033036,GO:0033365,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 366.0
BYD1_k127_10842195_12 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 366.0
BYD1_k127_10842195_13 Dehydrogenase K15054 - 1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005932 357.0
BYD1_k127_10842195_14 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 346.0
BYD1_k127_10842195_15 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 333.0
BYD1_k127_10842195_16 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003893 331.0
BYD1_k127_10842195_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 338.0
BYD1_k127_10842195_18 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 332.0
BYD1_k127_10842195_19 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 307.0
BYD1_k127_10842195_2 FAD binding domain K07077 - - 1.246e-215 682.0
BYD1_k127_10842195_20 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 288.0
BYD1_k127_10842195_21 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003321 282.0
BYD1_k127_10842195_22 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001086 291.0
BYD1_k127_10842195_23 Bacterial virulence factor lipase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000517 296.0
BYD1_k127_10842195_24 Phosphorylase superfamily K03784 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002036 274.0
BYD1_k127_10842195_25 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000004105 278.0
BYD1_k127_10842195_26 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000651 262.0
BYD1_k127_10842195_27 TPM domain K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000000838 261.0
BYD1_k127_10842195_28 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000006346 235.0
BYD1_k127_10842195_29 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000001326 229.0
BYD1_k127_10842195_3 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 613.0
BYD1_k127_10842195_30 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000001819 231.0
BYD1_k127_10842195_31 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000001444 211.0
BYD1_k127_10842195_32 Alpha beta hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000001168 205.0
BYD1_k127_10842195_33 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000002586 188.0
BYD1_k127_10842195_34 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000001994 185.0
BYD1_k127_10842195_35 TPM domain - - - 0.00000000000000000000000000000000000000000000000002018 183.0
BYD1_k127_10842195_36 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000004446 186.0
BYD1_k127_10842195_37 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000003341 175.0
BYD1_k127_10842195_38 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000005021 165.0
BYD1_k127_10842195_39 Phosphorylase superfamily K01243 - 3.2.2.9 0.000000000000000000000000000000000000001483 155.0
BYD1_k127_10842195_4 Major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 494.0
BYD1_k127_10842195_40 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000551 146.0
BYD1_k127_10842195_41 transcriptional - - - 0.0000000000000000000000000000004955 135.0
BYD1_k127_10842195_42 Putative phosphatase (DUF442) - - - 0.000000000000000000000000000001245 126.0
BYD1_k127_10842195_43 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.0000000000000000000000000001842 121.0
BYD1_k127_10842195_44 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000002261 113.0
BYD1_k127_10842195_45 Putative adhesin - - - 0.0000000000000000000000007321 116.0
BYD1_k127_10842195_46 Protein of unknown function (DUF2892) - - - 0.0000000000000000000009469 104.0
BYD1_k127_10842195_47 there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc K02913 - - 0.000000000000000000004107 94.0
BYD1_k127_10842195_48 Domain of unknown function (DUF4124) - - - 0.0000000000000000002045 97.0
BYD1_k127_10842195_49 AsmA family - - - 0.000000000000000001198 99.0
BYD1_k127_10842195_5 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 479.0
BYD1_k127_10842195_6 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 458.0
BYD1_k127_10842195_7 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 452.0
BYD1_k127_10842195_8 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 441.0
BYD1_k127_10842195_9 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 433.0
BYD1_k127_10897357_0 AcrB/AcrD/AcrF family - - - 0.0 1055.0
BYD1_k127_10897357_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.087e-315 975.0
BYD1_k127_10897357_10 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 326.0
BYD1_k127_10897357_11 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 303.0
BYD1_k127_10897357_12 permease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006389 267.0
BYD1_k127_10897357_13 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000002621 227.0
BYD1_k127_10897357_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000003258 226.0
BYD1_k127_10897357_15 Psort location Cytoplasmic, score 9.97 K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000001181 196.0
BYD1_k127_10897357_16 Histidine triad (HIT) protein K02503 - - 0.0000000000000000000000000000000000000000000000002121 179.0
BYD1_k127_10897357_17 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000001022 181.0
BYD1_k127_10897357_18 acetyltransferase K22441 - 2.3.1.57 0.000000000000000000000000000000000000000000003316 169.0
BYD1_k127_10897357_19 SURF1-like protein K14998 - - 0.00000000000000000000000000000000000000001248 167.0
BYD1_k127_10897357_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 2.89e-266 839.0
BYD1_k127_10897357_20 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000002096 175.0
BYD1_k127_10897357_21 Serine threonine protein kinase - - - 0.0000000000000000000000000000000003059 151.0
BYD1_k127_10897357_22 Tetratricopeptide repeat - - - 0.00000000000000000000004695 102.0
BYD1_k127_10897357_23 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000001069 97.0
BYD1_k127_10897357_24 signal sequence binding - - - 0.000000000000000000005628 105.0
BYD1_k127_10897357_25 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000002922 67.0
BYD1_k127_10897357_26 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000002217 64.0
BYD1_k127_10897357_28 calcium- and calmodulin-responsive adenylate cyclase activity K01179,K01406,K07004 - 3.2.1.4,3.4.24.40 0.0001859 54.0
BYD1_k127_10897357_3 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 542.0
BYD1_k127_10897357_4 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 552.0
BYD1_k127_10897357_5 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 394.0
BYD1_k127_10897357_6 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007849 365.0
BYD1_k127_10897357_7 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006518 350.0
BYD1_k127_10897357_8 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 329.0
BYD1_k127_10897357_9 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 318.0
BYD1_k127_10938134_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 2.482e-307 953.0
BYD1_k127_10938134_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 2.854e-280 875.0
BYD1_k127_10938134_10 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000005047 256.0
BYD1_k127_10938134_11 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000002039 244.0
BYD1_k127_10938134_12 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000003263 162.0
BYD1_k127_10938134_13 Cellulose synthase operon protein C C-terminus (BCSC_C) K20543 - - 0.000000000000000000000000000000000001719 159.0
BYD1_k127_10938134_14 competence protein ComEA K02237 - - 0.000000000000002778 86.0
BYD1_k127_10938134_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.572e-267 833.0
BYD1_k127_10938134_3 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 493.0
BYD1_k127_10938134_4 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 472.0
BYD1_k127_10938134_5 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008193 500.0
BYD1_k127_10938134_6 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 469.0
BYD1_k127_10938134_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 428.0
BYD1_k127_10938134_8 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 370.0
BYD1_k127_10938134_9 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007294 249.0
BYD1_k127_11174549_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1319.0
BYD1_k127_11174549_1 Neisseria PilC beta-propeller domain K02674 - - 0.0 1108.0
BYD1_k127_11174549_10 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 438.0
BYD1_k127_11174549_11 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 409.0
BYD1_k127_11174549_12 Type IV Pilus-assembly protein W K02672 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 421.0
BYD1_k127_11174549_13 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 378.0
BYD1_k127_11174549_14 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 363.0
BYD1_k127_11174549_15 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 340.0
BYD1_k127_11174549_16 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 349.0
BYD1_k127_11174549_17 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 345.0
BYD1_k127_11174549_18 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 328.0
BYD1_k127_11174549_19 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 319.0
BYD1_k127_11174549_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 5.542e-252 788.0
BYD1_k127_11174549_20 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005314 314.0
BYD1_k127_11174549_21 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 314.0
BYD1_k127_11174549_22 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 289.0
BYD1_k127_11174549_23 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003631 278.0
BYD1_k127_11174549_24 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000003978 280.0
BYD1_k127_11174549_25 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000003998 221.0
BYD1_k127_11174549_26 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000658 220.0
BYD1_k127_11174549_27 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000003674 227.0
BYD1_k127_11174549_28 type IV pilus modification protein PilV K02671 - - 0.00000000000000000000000000000000000000000000000000000000002331 211.0
BYD1_k127_11174549_29 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000006898 218.0
BYD1_k127_11174549_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008773,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019538,GO:0019752,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0070569,GO:0071704,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.59 1.157e-249 799.0
BYD1_k127_11174549_30 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000007218 203.0
BYD1_k127_11174549_31 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000007785 203.0
BYD1_k127_11174549_32 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.00000000000000000000000000000000000000000003706 178.0
BYD1_k127_11174549_33 Smr protein - - - 0.0000000000000000000000000000000000000001197 156.0
BYD1_k127_11174549_34 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.0000000000000000000000000000000001599 138.0
BYD1_k127_11174549_35 Pilus assembly protein PilX - - - 0.00000000000000000000000000000003111 134.0
BYD1_k127_11174549_36 Prokaryotic N-terminal methylation motif K02655 - - 0.0000000000000000000000000000006229 126.0
BYD1_k127_11174549_37 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.000000000000000000000000000002942 126.0
BYD1_k127_11174549_38 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 GO:0000003,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0019954,GO:0022402,GO:0022414,GO:0030428,GO:0032153,GO:0032505,GO:0042802,GO:0043093,GO:0044464,GO:0051301 - 0.0000000000000000000005407 100.0
BYD1_k127_11174549_39 Belongs to the skp family K06142 - - 0.0000000000000000000182 98.0
BYD1_k127_11174549_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 649.0
BYD1_k127_11174549_5 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 589.0
BYD1_k127_11174549_6 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 457.0
BYD1_k127_11174549_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000512 448.0
BYD1_k127_11174549_8 zinc metalloprotease K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 448.0
BYD1_k127_11174549_9 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 439.0
BYD1_k127_11307632_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 526.0
BYD1_k127_11307632_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 437.0
BYD1_k127_11307632_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 394.0
BYD1_k127_11307632_3 FtsX-like permease family K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 304.0
BYD1_k127_11307632_4 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000003712 153.0
BYD1_k127_11307632_5 ABC transporter K02003 - - 0.000000000000000000005986 93.0
BYD1_k127_11451202_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 6.505e-228 733.0
BYD1_k127_11451202_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.088e-215 680.0
BYD1_k127_11451202_10 PFAM Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003108 337.0
BYD1_k127_11451202_11 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 303.0
BYD1_k127_11451202_12 COG2951 Membrane-bound lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002037 300.0
BYD1_k127_11451202_13 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003576 279.0
BYD1_k127_11451202_14 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000003829 265.0
BYD1_k127_11451202_15 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001464 255.0
BYD1_k127_11451202_16 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000002383 251.0
BYD1_k127_11451202_17 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000000003078 190.0
BYD1_k127_11451202_18 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000002036 203.0
BYD1_k127_11451202_19 redox protein regulator of disulfide bond formation - - - 0.000000000000000000000000000000000000001804 164.0
BYD1_k127_11451202_2 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 602.0
BYD1_k127_11451202_20 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.0000000000000000000000000009157 118.0
BYD1_k127_11451202_21 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000003577 108.0
BYD1_k127_11451202_22 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K06149 - - 0.000000000000000000000001368 115.0
BYD1_k127_11451202_23 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000001063 108.0
BYD1_k127_11451202_3 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 553.0
BYD1_k127_11451202_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 511.0
BYD1_k127_11451202_5 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 467.0
BYD1_k127_11451202_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 433.0
BYD1_k127_11451202_7 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004722 380.0
BYD1_k127_11451202_8 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008614,GO:0008615,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0036094,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046184,GO:0046483,GO:0046872,GO:0046914,GO:0048037,GO:0050570,GO:0050662,GO:0051186,GO:0051188,GO:0051287,GO:0055114,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 365.0
BYD1_k127_11451202_9 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 366.0
BYD1_k127_1148289_0 Formate dehydrogenase alpha subunit K00123 - 1.17.1.9 0.0 1419.0
BYD1_k127_1148289_1 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 9.083e-236 756.0
BYD1_k127_1148289_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002793 276.0
BYD1_k127_1148289_11 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002146 274.0
BYD1_k127_1148289_12 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000005578 229.0
BYD1_k127_1148289_13 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00127 - - 0.00000000000000000000000000000000000000000000000004759 196.0
BYD1_k127_1148289_14 Repressor involved in choline regulation of the bet genes K02167 - - 0.000000000000000000000000000000000000000006156 179.0
BYD1_k127_1148289_16 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.00000000000004479 74.0
BYD1_k127_1148289_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00124 - - 1.5e-224 706.0
BYD1_k127_1148289_3 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 8.203e-219 691.0
BYD1_k127_1148289_4 trimethylamine methyltransferase K14083 - 2.1.1.250 1.533e-208 661.0
BYD1_k127_1148289_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 1.663e-202 638.0
BYD1_k127_1148289_6 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499,K16319 - 1.14.12.1,1.14.15.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 510.0
BYD1_k127_1148289_7 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 426.0
BYD1_k127_1148289_8 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 400.0
BYD1_k127_1148289_9 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007362 332.0
BYD1_k127_11525082_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 3.245e-255 809.0
BYD1_k127_11525082_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008499 609.0
BYD1_k127_11525082_10 - - - - 0.00000000000000000000000000000000000000001161 164.0
BYD1_k127_11525082_11 Sulfotransferase domain - - - 0.00000000000000000000000000000000004515 147.0
BYD1_k127_11525082_13 Phosphopantetheine attachment site - - - 0.0000000009838 68.0
BYD1_k127_11525082_14 Acetyltransferase (GNAT) domain - - - 0.000000009046 67.0
BYD1_k127_11525082_2 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 596.0
BYD1_k127_11525082_3 Phosphoglucomutase/phosphomannomutase, C-terminal domain K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 590.0
BYD1_k127_11525082_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 422.0
BYD1_k127_11525082_5 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 422.0
BYD1_k127_11525082_6 Phosphoadenosine phosphosulfate reductase family K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 282.0
BYD1_k127_11525082_7 ADP-L-glycero-beta-D-manno-heptose biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000693 285.0
BYD1_k127_11525082_8 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001233 245.0
BYD1_k127_11525082_9 Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000000000000000000000000007091 208.0
BYD1_k127_11567212_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.209e-204 644.0
BYD1_k127_11567212_1 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 612.0
BYD1_k127_11567212_10 PFAM lipopolysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000008789 168.0
BYD1_k127_11567212_11 Sulfotransferase family - - - 0.0000000000000000002495 103.0
BYD1_k127_11567212_12 - - - - 0.0000000000000000008934 97.0
BYD1_k127_11567212_13 Sulfotransferase family - - - 0.00000000000006463 85.0
BYD1_k127_11567212_2 Polysaccharide biosynthesis/export protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007941 619.0
BYD1_k127_11567212_3 Phosphoglucose isomerase K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 486.0
BYD1_k127_11567212_4 Phosphoadenosine phosphosulfate reductase family K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 460.0
BYD1_k127_11567212_5 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 392.0
BYD1_k127_11567212_6 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 362.0
BYD1_k127_11567212_7 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004319 264.0
BYD1_k127_11567212_8 Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP- C55) K13007 - - 0.0000000000000000000000000000000000000000000000000000000000000000006391 241.0
BYD1_k127_11567212_9 Glycosyl transferase 4-like - - - 0.00000000000000000000000000000000000000000001075 183.0
BYD1_k127_11751436_0 PFAM Carbon starvation protein CstA K06200 - - 2.153e-320 997.0
BYD1_k127_11751436_1 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 3.759e-290 907.0
BYD1_k127_11751436_10 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006875 358.0
BYD1_k127_11751436_11 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 349.0
BYD1_k127_11751436_12 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 352.0
BYD1_k127_11751436_13 Preprotein translocase subunit TatD K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 314.0
BYD1_k127_11751436_14 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000003153 211.0
BYD1_k127_11751436_15 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.000000000000000000000000000000000000000000000000000000114 209.0
BYD1_k127_11751436_16 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000000000000000000338 181.0
BYD1_k127_11751436_17 - - - - 0.000000000000000000002411 100.0
BYD1_k127_11751436_18 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000009026 106.0
BYD1_k127_11751436_19 DNA topological change - - - 0.00000000000000009118 91.0
BYD1_k127_11751436_2 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009498 608.0
BYD1_k127_11751436_20 Selenoprotein, putative - - - 0.000000001104 72.0
BYD1_k127_11751436_3 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 515.0
BYD1_k127_11751436_4 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 466.0
BYD1_k127_11751436_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002569 451.0
BYD1_k127_11751436_6 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 424.0
BYD1_k127_11751436_7 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 406.0
BYD1_k127_11751436_8 PFAM ABC transporter related K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 376.0
BYD1_k127_11751436_9 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000457 352.0
BYD1_k127_12023804_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1234.0
BYD1_k127_12023804_1 Belongs to the ClpA ClpB family K03694 - - 0.0 1045.0
BYD1_k127_12023804_10 COG0076 Glutamate decarboxylase and related PLP-dependent - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000942 380.0
BYD1_k127_12023804_11 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000005383 268.0
BYD1_k127_12023804_12 Belongs to the BI1 family K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001893 255.0
BYD1_k127_12023804_13 - - - - 0.000000000000000000000000000000000000000000000000000000001424 215.0
BYD1_k127_12023804_14 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000001315 179.0
BYD1_k127_12023804_15 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000006647 156.0
BYD1_k127_12023804_16 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000001197 156.0
BYD1_k127_12023804_17 Type II secretion system protein C - - - 0.000000000000000000000000000000000000002136 160.0
BYD1_k127_12023804_18 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000001102 136.0
BYD1_k127_12023804_19 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000000124 130.0
BYD1_k127_12023804_2 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.895e-264 834.0
BYD1_k127_12023804_20 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000002314 123.0
BYD1_k127_12023804_21 Phosphoglycerate mutase family - - - 0.0000000000000000006439 97.0
BYD1_k127_12023804_22 - - - - 0.000000000000002003 84.0
BYD1_k127_12023804_24 VanZ like family - - - 0.0005641 50.0
BYD1_k127_12023804_3 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 1.446e-200 638.0
BYD1_k127_12023804_4 AAA ATPase, central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 563.0
BYD1_k127_12023804_5 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 554.0
BYD1_k127_12023804_6 general secretion pathway protein D K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 534.0
BYD1_k127_12023804_7 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 472.0
BYD1_k127_12023804_8 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 421.0
BYD1_k127_12023804_9 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006767 393.0
BYD1_k127_12026009_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.042e-295 919.0
BYD1_k127_12026009_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 4.429e-248 773.0
BYD1_k127_12026009_10 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 510.0
BYD1_k127_12026009_11 protein conserved in bacteria K09989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 511.0
BYD1_k127_12026009_12 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 505.0
BYD1_k127_12026009_13 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 489.0
BYD1_k127_12026009_14 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 454.0
BYD1_k127_12026009_15 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 430.0
BYD1_k127_12026009_16 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 421.0
BYD1_k127_12026009_17 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 377.0
BYD1_k127_12026009_18 abc transporter atp-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005274 342.0
BYD1_k127_12026009_19 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000874 335.0
BYD1_k127_12026009_2 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 5.536e-196 619.0
BYD1_k127_12026009_20 Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6-phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009085 306.0
BYD1_k127_12026009_21 Belongs to the peptidase S1C family K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 313.0
BYD1_k127_12026009_22 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 297.0
BYD1_k127_12026009_23 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001309 288.0
BYD1_k127_12026009_24 PFAM LppC K07121 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003862 281.0
BYD1_k127_12026009_25 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000004492 252.0
BYD1_k127_12026009_26 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.0000000000000000000000000000000000000000000000000000000000000000000159 252.0
BYD1_k127_12026009_27 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000004256 239.0
BYD1_k127_12026009_28 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000002203 244.0
BYD1_k127_12026009_29 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 - 3.1.4.53 0.000000000000000000000000000000000000000000000000000000000003264 216.0
BYD1_k127_12026009_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 609.0
BYD1_k127_12026009_30 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000000002076 201.0
BYD1_k127_12026009_31 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000001446 183.0
BYD1_k127_12026009_32 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000004732 173.0
BYD1_k127_12026009_33 protein conserved in bacteria K09973 - - 0.000000000000000000000000000000000000000000111 172.0
BYD1_k127_12026009_34 PFAM CAAX amino terminal protease family K07052 - - 0.000000000000000000000000000000000000000005942 171.0
BYD1_k127_12026009_35 hydrolase activity, acting on ester bonds K01259 - 3.4.11.5 0.00000000000000000000000000000000000000005963 165.0
BYD1_k127_12026009_36 peptidase S16, lon K07157 - - 0.0000000000000000000000000000000000000402 164.0
BYD1_k127_12026009_37 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.00000000000000000000000000000000000005352 149.0
BYD1_k127_12026009_38 Sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000000002358 143.0
BYD1_k127_12026009_39 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000007625 139.0
BYD1_k127_12026009_4 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000675 610.0
BYD1_k127_12026009_40 Belongs to the UPF0102 family K07460 - - 0.000000000000000001806 100.0
BYD1_k127_12026009_41 LppC putative lipoprotein - - - 0.000000000000000004031 88.0
BYD1_k127_12026009_42 Belongs to the BolA IbaG family - - - 0.0000000000000000696 82.0
BYD1_k127_12026009_43 - - - - 0.0000003531 63.0
BYD1_k127_12026009_44 lipopolysaccharide transmembrane transporter activity K02040,K11719 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015920,GO:0016020,GO:0016021,GO:0017089,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.000001734 59.0
BYD1_k127_12026009_45 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0009279,GO:0010876,GO:0015920,GO:0016020,GO:0017089,GO:0019867,GO:0030288,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044462,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0071702,GO:0071944,GO:1901264 - 0.0006424 50.0
BYD1_k127_12026009_5 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 627.0
BYD1_k127_12026009_6 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 574.0
BYD1_k127_12026009_7 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 580.0
BYD1_k127_12026009_8 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 572.0
BYD1_k127_12026009_9 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 527.0
BYD1_k127_12037411_0 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 423.0
BYD1_k127_12037411_1 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004053 429.0
BYD1_k127_12037411_10 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000006452 234.0
BYD1_k127_12037411_11 HD domain K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000253 216.0
BYD1_k127_12037411_12 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000006947 224.0
BYD1_k127_12037411_13 ferroxidase activity K03594 GO:0006873,GO:0006875,GO:0006879,GO:0006880,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0051179,GO:0051235,GO:0051238,GO:0051641,GO:0051651,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0097577,GO:0098771 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000002406 209.0
BYD1_k127_12037411_14 membrane protein domain - - - 0.0000000000000000000000000000000000000000000166 166.0
BYD1_k127_12037411_15 protein conserved in bacteria K04750 - - 0.00000000000000000000000000000000000000000006978 165.0
BYD1_k127_12037411_16 PFAM Cytochrome C - - - 0.000000000000000000000000000000005909 136.0
BYD1_k127_12037411_17 - - - - 0.00000000000000000000000000000001312 143.0
BYD1_k127_12037411_18 BON domain K04065 - - 0.0000000000000000000000002347 112.0
BYD1_k127_12037411_19 Belongs to the UPF0337 (CsbD) family - - - 0.00000000000000000000001332 108.0
BYD1_k127_12037411_2 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 366.0
BYD1_k127_12037411_21 OmpA-like transmembrane domain - - - 0.000000000000000002153 93.0
BYD1_k127_12037411_22 response regulator receiver - - - 0.000000000000000007379 89.0
BYD1_k127_12037411_23 UPF0391 membrane protein - - - 0.0000000000000008905 78.0
BYD1_k127_12037411_24 Putative DNA-binding domain - - - 0.00000000000006872 76.0
BYD1_k127_12037411_26 - - - - 0.00002136 52.0
BYD1_k127_12037411_3 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 336.0
BYD1_k127_12037411_4 Isoprenylcysteine carboxyl methyltransferase (ICMT) family K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003503 291.0
BYD1_k127_12037411_5 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001105 262.0
BYD1_k127_12037411_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007068 273.0
BYD1_k127_12037411_7 Amidinotransferase K01482 - 3.5.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000765 258.0
BYD1_k127_12037411_8 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005523 247.0
BYD1_k127_12037411_9 Histidine kinase K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000001319 250.0
BYD1_k127_1231327_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1149.0
BYD1_k127_1231327_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1098.0
BYD1_k127_1231327_2 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 306.0
BYD1_k127_1231327_3 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000008576 241.0
BYD1_k127_1231327_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000004051 226.0
BYD1_k127_1231327_5 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001372 225.0
BYD1_k127_1271661_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 5.805e-270 874.0
BYD1_k127_1271661_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 619.0
BYD1_k127_1271661_10 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001463 275.0
BYD1_k127_1271661_11 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000005952 222.0
BYD1_k127_1271661_12 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000008744 195.0
BYD1_k127_1271661_13 glycoprotease K14742 - - 0.0000000000000000000000000000000000000000000003138 192.0
BYD1_k127_1271661_14 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000001342 160.0
BYD1_k127_1271661_15 ECF sigma factor K03088 - - 0.00000000000000000000004162 105.0
BYD1_k127_1271661_16 Protein of unknown function (DUF2905) - - - 0.00000000000000000766 84.0
BYD1_k127_1271661_17 Transposase IS200 like - - - 0.000003538 56.0
BYD1_k127_1271661_2 HELICc2 K03722 GO:0003674,GO:0003824,GO:0004386,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008026,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0070035,GO:0071704,GO:0090304,GO:1901360 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 608.0
BYD1_k127_1271661_3 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 468.0
BYD1_k127_1271661_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 426.0
BYD1_k127_1271661_5 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 422.0
BYD1_k127_1271661_6 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 386.0
BYD1_k127_1271661_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 389.0
BYD1_k127_1271661_8 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 341.0
BYD1_k127_1271661_9 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 297.0
BYD1_k127_1490405_0 polysaccharide deactylase family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 385.0
BYD1_k127_1490405_1 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000009683 258.0
BYD1_k127_1490405_2 PFAM VanZ family protein - - - 0.000000000000000000000000000000000000007817 161.0
BYD1_k127_1583533_0 OmpA family - - - 0.0 1628.0
BYD1_k127_1583533_1 Protein of unknown function, DUF255 K06888 - - 4.925e-250 789.0
BYD1_k127_1583533_10 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 362.0
BYD1_k127_1583533_11 Cupin superfamily protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 359.0
BYD1_k127_1583533_12 protein involved in response to NO K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 342.0
BYD1_k127_1583533_13 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 319.0
BYD1_k127_1583533_14 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000003831 254.0
BYD1_k127_1583533_15 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000000000000000000000000000000003826 233.0
BYD1_k127_1583533_16 Aspartyl Asparaginyl beta-hydroxylase K12979 - - 0.00000000000000000000000000000000000000000000000000000000000005643 229.0
BYD1_k127_1583533_17 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000000000000000000000000000000000000000000000005564 197.0
BYD1_k127_1583533_18 protein affecting Mg2 Co2 transport K06195 - - 0.00000000000000000000000000000000000000000000000002766 183.0
BYD1_k127_1583533_19 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000005121 173.0
BYD1_k127_1583533_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 4.98e-249 801.0
BYD1_k127_1583533_20 arylformamidase activity - - - 0.0000000000000000000000000000000000000000000008992 176.0
BYD1_k127_1583533_21 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000000002106 167.0
BYD1_k127_1583533_22 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000000000000000000004991 167.0
BYD1_k127_1583533_23 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000004767 151.0
BYD1_k127_1583533_24 PFAM TfoX domain protein K07343 - - 0.0000000000000000000000000000001436 128.0
BYD1_k127_1583533_25 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000000003791 123.0
BYD1_k127_1583533_26 Zinc-finger domain - - - 0.000000000000000000009509 93.0
BYD1_k127_1583533_27 Tetracyclin repressor, C-terminal all-alpha domain - - - 0.000000000000002824 83.0
BYD1_k127_1583533_29 universal stress protein K06149 - - 0.000000000003325 68.0
BYD1_k127_1583533_3 cytochrome C peroxidase - - - 1.446e-234 732.0
BYD1_k127_1583533_4 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 478.0
BYD1_k127_1583533_5 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 463.0
BYD1_k127_1583533_6 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 GO:0000287,GO:0003674,GO:0003824,GO:0004799,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009314,GO:0009394,GO:0009628,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046073,GO:0046385,GO:0046483,GO:0046872,GO:0050896,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 430.0
BYD1_k127_1583533_7 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 425.0
BYD1_k127_1583533_8 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009602 413.0
BYD1_k127_1583533_9 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 374.0
BYD1_k127_158849_0 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008921 573.0
BYD1_k127_158849_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 554.0
BYD1_k127_158849_10 - - - - 0.0000000000000000000001007 101.0
BYD1_k127_158849_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 529.0
BYD1_k127_158849_3 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 281.0
BYD1_k127_158849_4 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000001137 229.0
BYD1_k127_158849_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001902 218.0
BYD1_k127_158849_6 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000001158 177.0
BYD1_k127_158849_7 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.000000000000000000000000000000000000001092 151.0
BYD1_k127_158849_8 transcriptional regulator K06995 - - 0.0000000000000000000000000000000000305 138.0
BYD1_k127_158849_9 DNA mediated transformation K04096 - - 0.0000000000000000000000000000000009963 148.0
BYD1_k127_1802964_0 Pfam Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 587.0
BYD1_k127_1802964_1 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 508.0
BYD1_k127_1802964_2 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009215 310.0
BYD1_k127_1802964_3 Belongs to the arginase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 313.0
BYD1_k127_1802964_4 PFAM Rhodanese domain protein K03892 - - 0.00000000000000000000000000000000000000000000000000000000000000003878 229.0
BYD1_k127_1802964_5 Conserved protein containing a Zn-ribbon-like motif possibly RNA-binding - - - 0.00000000000000000000000000000000000000000000000004946 185.0
BYD1_k127_1802964_6 lipid kinase activity - - - 0.000000000000000000000000000000000000000000006812 175.0
BYD1_k127_181403_0 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 612.0
BYD1_k127_181403_1 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 464.0
BYD1_k127_181403_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 450.0
BYD1_k127_181403_3 Belongs to the glutaminase family K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 315.0
BYD1_k127_181403_4 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 308.0
BYD1_k127_181403_5 COG NOG10142 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001147 280.0
BYD1_k127_181403_6 Bile acid K03453 - - 0.0000000000000000000000000000000000000000000000000000000002073 213.0
BYD1_k127_181403_7 PFAM regulatory protein LuxR K13041 - - 0.00000000000000000000000000000000000000000000000000001827 202.0
BYD1_k127_181403_8 Pfam Response regulator receiver - - - 0.000000000000000000000000000000000002553 141.0
BYD1_k127_181403_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000001865 85.0
BYD1_k127_1969881_0 Chromate resistance exported protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002898 284.0
BYD1_k127_1969881_1 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001858 255.0
BYD1_k127_1991918_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 359.0
BYD1_k127_1991918_1 E-Z type HEAT repeats - - - 0.000004458 57.0
BYD1_k127_2077981_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1560.0
BYD1_k127_2077981_1 XFP C-terminal domain K01621 - 4.1.2.22,4.1.2.9 0.0 1262.0
BYD1_k127_2077981_10 Methyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 349.0
BYD1_k127_2077981_11 ABC transporter K09697 - 3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 322.0
BYD1_k127_2077981_12 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 335.0
BYD1_k127_2077981_13 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 287.0
BYD1_k127_2077981_14 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002482 299.0
BYD1_k127_2077981_15 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007328 288.0
BYD1_k127_2077981_16 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002694 281.0
BYD1_k127_2077981_17 glutathione s-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003345 272.0
BYD1_k127_2077981_18 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000123 267.0
BYD1_k127_2077981_19 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000003801 231.0
BYD1_k127_2077981_2 Heavy metal translocating P-type atpase K17686 - 3.6.3.54 1.111e-314 985.0
BYD1_k127_2077981_20 Sodium ABC transporter permease K09696 - - 0.0000000000000000000000000000000000000000000000000000000000002953 234.0
BYD1_k127_2077981_21 Cation efflux family - - - 0.0000000000000000000000000000000000000000000000000000002943 201.0
BYD1_k127_2077981_22 helix_turn_helix, mercury resistance K19591 - - 0.00000000000000000000000000000000000000000000002641 173.0
BYD1_k127_2077981_23 - - - - 0.000000000000000000000000000000000000000001112 162.0
BYD1_k127_2077981_26 SnoaL-like domain - - - 0.0000000005485 66.0
BYD1_k127_2077981_27 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286 - - 0.000004496 55.0
BYD1_k127_2077981_3 Carbohydrate phosphorylase - - - 6.455e-229 721.0
BYD1_k127_2077981_4 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 568.0
BYD1_k127_2077981_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 542.0
BYD1_k127_2077981_6 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 484.0
BYD1_k127_2077981_7 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007894 366.0
BYD1_k127_2077981_8 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07798 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 376.0
BYD1_k127_2077981_9 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 GO:0003674,GO:0003824,GO:0004620,GO:0004630,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008081,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016298,GO:0016740,GO:0016772,GO:0016780,GO:0016787,GO:0016788,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008805 349.0
BYD1_k127_2113384_0 TonB dependent receptor K02014 - - 2.905e-309 975.0
BYD1_k127_2113384_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 8.869e-220 691.0
BYD1_k127_2113384_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 337.0
BYD1_k127_2113384_11 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 335.0
BYD1_k127_2113384_12 cyclic-guanylate-specific phosphodiesterase activity K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 338.0
BYD1_k127_2113384_13 FimV C-terminal K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006193 334.0
BYD1_k127_2113384_14 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004307 303.0
BYD1_k127_2113384_15 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 301.0
BYD1_k127_2113384_16 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 289.0
BYD1_k127_2113384_17 pfam mofrl K11529 - 2.7.1.165 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000474 286.0
BYD1_k127_2113384_18 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002251 290.0
BYD1_k127_2113384_19 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000001109 275.0
BYD1_k127_2113384_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 3.172e-217 680.0
BYD1_k127_2113384_20 serine threonine protein kinase K11912,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000002339 236.0
BYD1_k127_2113384_21 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000004639 222.0
BYD1_k127_2113384_22 GAF domain K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000008679 188.0
BYD1_k127_2113384_23 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0071704,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000002555 183.0
BYD1_k127_2113384_24 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000009333 157.0
BYD1_k127_2113384_25 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000004688 100.0
BYD1_k127_2113384_26 membrane protein, required for colicin V production K03558 - - 0.00000000000000002311 93.0
BYD1_k127_2113384_27 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000002976 90.0
BYD1_k127_2113384_28 Sporulation related domain K03749 - - 0.00000000002496 76.0
BYD1_k127_2113384_29 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.0000008066 51.0
BYD1_k127_2113384_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 579.0
BYD1_k127_2113384_31 - - - - 0.0000229 48.0
BYD1_k127_2113384_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 497.0
BYD1_k127_2113384_5 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 467.0
BYD1_k127_2113384_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 416.0
BYD1_k127_2113384_7 Mur ligase family, glutamate ligase domain K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 382.0
BYD1_k127_2113384_8 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007395 379.0
BYD1_k127_2113384_9 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 375.0
BYD1_k127_2194699_0 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0000000000000000000000000000000000000000000000000000000001635 213.0
BYD1_k127_2194699_1 Formate nitrite K02598,K06212 - - 0.0000000000000000000000000000000000000000000000004562 178.0
BYD1_k127_2194699_2 PFAM zinc finger DksA TraR C4-type - - - 0.0000000000000000000000000002018 121.0
BYD1_k127_2216508_0 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005724 309.0
BYD1_k127_2730631_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 2.953e-241 768.0
BYD1_k127_2730631_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 475.0
BYD1_k127_2730631_2 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 299.0
BYD1_k127_2730631_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000001186 219.0
BYD1_k127_2730631_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000002203 177.0
BYD1_k127_2730631_5 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000001926 80.0
BYD1_k127_274831_0 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006552 586.0
BYD1_k127_274831_1 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 397.0
BYD1_k127_274831_2 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009673 278.0
BYD1_k127_274831_3 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000001065 147.0
BYD1_k127_274831_4 Pfam Major Facilitator Superfamily - - - 0.00000000000000000006047 90.0
BYD1_k127_274831_5 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000003937 61.0
BYD1_k127_2874460_0 - - - - 0.0000000000000785 78.0
BYD1_k127_2874460_1 Angiotensin-converting enzyme K01283 - 3.4.15.1 0.0000006896 62.0
BYD1_k127_289901_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 461.0
BYD1_k127_289901_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 381.0
BYD1_k127_289901_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000005351 199.0
BYD1_k127_289901_11 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000002114 177.0
BYD1_k127_289901_12 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000001368 166.0
BYD1_k127_289901_13 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001377 144.0
BYD1_k127_289901_14 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000705 145.0
BYD1_k127_289901_15 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000894 138.0
BYD1_k127_289901_16 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000009347 153.0
BYD1_k127_289901_17 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000001383 141.0
BYD1_k127_289901_18 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000002035 125.0
BYD1_k127_289901_19 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000000000001466 123.0
BYD1_k127_289901_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 313.0
BYD1_k127_289901_20 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000003667 78.0
BYD1_k127_289901_21 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00002509 54.0
BYD1_k127_289901_22 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00004073 54.0
BYD1_k127_289901_3 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 283.0
BYD1_k127_289901_4 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005235 261.0
BYD1_k127_289901_5 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001154 254.0
BYD1_k127_289901_6 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000008285 246.0
BYD1_k127_289901_7 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000003517 216.0
BYD1_k127_289901_8 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.00000000000000000000000000000000000000000000000000000000001099 209.0
BYD1_k127_289901_9 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001636 208.0
BYD1_k127_293697_0 COG3459 Cellobiose phosphorylase - - - 0.0 3982.0
BYD1_k127_293697_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1498.0
BYD1_k127_293697_10 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 1.996e-264 837.0
BYD1_k127_293697_100 molybdenum cofactor guanylyltransferase activity K03637,K03752,K13818 - 2.7.7.77,4.6.1.17 0.0000000000000000000000000000000000000000000000001909 190.0
BYD1_k127_293697_101 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000003918 177.0
BYD1_k127_293697_102 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000001043 186.0
BYD1_k127_293697_103 phenylacetic acid degradation protein K02614 - - 0.0000000000000000000000000000000000000000000166 166.0
BYD1_k127_293697_104 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000002241 169.0
BYD1_k127_293697_105 Phenylacetic acid degradation B K02610 - - 0.00000000000000000000000000000000000000002857 153.0
BYD1_k127_293697_106 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K05997,K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - 0.0000000000000000000000000000000000000002893 154.0
BYD1_k127_293697_107 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.000000000000000000000000000000000000003298 160.0
BYD1_k127_293697_108 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000006864 151.0
BYD1_k127_293697_109 PFAM regulatory protein, MarR - - - 0.00000000000000000000000000000000000001708 149.0
BYD1_k127_293697_11 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 1.101e-259 822.0
BYD1_k127_293697_110 COG3201 Nicotinamide mononucleotide transporter K03811 - - 0.0000000000000000000000000000000000001873 147.0
BYD1_k127_293697_111 - - - - 0.0000000000000000000000000000000000003866 156.0
BYD1_k127_293697_112 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000000008003 142.0
BYD1_k127_293697_113 PAS sensor protein - - - 0.00000000000000000000000000000000001772 158.0
BYD1_k127_293697_114 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000000000000000336 136.0
BYD1_k127_293697_115 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000006273 140.0
BYD1_k127_293697_117 Regulatory protein GntR HTH - - - 0.00000000000000000000000000000000125 143.0
BYD1_k127_293697_118 Cyclase dehydrase - - - 0.000000000000000000000000000000002612 135.0
BYD1_k127_293697_119 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000001052 132.0
BYD1_k127_293697_12 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 3.251e-256 806.0
BYD1_k127_293697_120 lipid kinase, YegS Rv2252 BmrU family - - - 0.0000000000000000000000000000391 135.0
BYD1_k127_293697_121 SCO1/SenC K07152 - - 0.0000000000000000000000000001454 123.0
BYD1_k127_293697_122 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.0000000000000000000000000003749 126.0
BYD1_k127_293697_123 Transglycosylase associated protein - - - 0.000000000000000000000000004941 116.0
BYD1_k127_293697_124 Protein of unknown function (DUF1249) K09920 - - 0.00000000000000000000000004121 113.0
BYD1_k127_293697_125 PDZ domain - - - 0.0000000000000000000000006768 120.0
BYD1_k127_293697_126 - - - - 0.000000000000000000000004082 104.0
BYD1_k127_293697_127 protein conserved in bacteria - - - 0.00000000000000000000003917 109.0
BYD1_k127_293697_128 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000005177 102.0
BYD1_k127_293697_129 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000002104 102.0
BYD1_k127_293697_13 ABC-type multidrug transport system ATPase and permease K06147 - - 3.044e-253 794.0
BYD1_k127_293697_130 Transglycosylase associated protein - - - 0.0000000000000000000002722 103.0
BYD1_k127_293697_131 Domain of unknown function (DUF4398) - - - 0.00000000000000000000176 99.0
BYD1_k127_293697_132 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000005491 91.0
BYD1_k127_293697_133 ThiS family - - - 0.0000000000000000005583 98.0
BYD1_k127_293697_134 YKOF-related Family - - - 0.0000000000000001253 81.0
BYD1_k127_293697_135 - - - - 0.0000000000005771 73.0
BYD1_k127_293697_136 Transglycosylase associated protein - - - 0.00000000001841 73.0
BYD1_k127_293697_137 Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis K15539 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000001432 73.0
BYD1_k127_293697_139 PFAM Choline ethanolamine kinase - - - 0.000000006735 68.0
BYD1_k127_293697_14 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 7.732e-251 782.0
BYD1_k127_293697_141 - - - - 0.0000003485 62.0
BYD1_k127_293697_15 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.158e-241 780.0
BYD1_k127_293697_16 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 3.505e-226 723.0
BYD1_k127_293697_17 amino acid K03294 - - 3.613e-224 704.0
BYD1_k127_293697_18 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 4.208e-212 670.0
BYD1_k127_293697_19 acyl-CoA dehydrogenase - - - 3.353e-196 634.0
BYD1_k127_293697_2 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1470.0
BYD1_k127_293697_20 Belongs to the thiolase family K00626,K00632,K07823 - 2.3.1.16,2.3.1.174,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 584.0
BYD1_k127_293697_21 3-hydroxyacyl-coa dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 599.0
BYD1_k127_293697_22 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 585.0
BYD1_k127_293697_23 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 602.0
BYD1_k127_293697_24 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0019538,GO:0023052,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 579.0
BYD1_k127_293697_25 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 567.0
BYD1_k127_293697_26 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 555.0
BYD1_k127_293697_27 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 537.0
BYD1_k127_293697_28 Acyl-CoA dehydrogenase, middle domain K00253 - 1.3.8.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 554.0
BYD1_k127_293697_29 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 543.0
BYD1_k127_293697_3 Di-haem cytochrome c peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 0.0 1132.0
BYD1_k127_293697_30 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 548.0
BYD1_k127_293697_31 TonB-dependent receptor plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 546.0
BYD1_k127_293697_32 Phenylacetate-CoA oxygenase K02609 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 527.0
BYD1_k127_293697_33 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 520.0
BYD1_k127_293697_34 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 546.0
BYD1_k127_293697_35 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 489.0
BYD1_k127_293697_36 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 483.0
BYD1_k127_293697_37 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 480.0
BYD1_k127_293697_38 glycolate oxidase subunit GlcD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 473.0
BYD1_k127_293697_39 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 465.0
BYD1_k127_293697_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1129.0
BYD1_k127_293697_40 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 442.0
BYD1_k127_293697_41 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 435.0
BYD1_k127_293697_42 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 429.0
BYD1_k127_293697_43 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 432.0
BYD1_k127_293697_44 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001738 430.0
BYD1_k127_293697_45 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 419.0
BYD1_k127_293697_46 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004187 434.0
BYD1_k127_293697_47 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 407.0
BYD1_k127_293697_48 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 425.0
BYD1_k127_293697_49 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005194 411.0
BYD1_k127_293697_5 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 0.0 1099.0
BYD1_k127_293697_50 Peptidase M48 K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 391.0
BYD1_k127_293697_51 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 387.0
BYD1_k127_293697_52 peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 395.0
BYD1_k127_293697_53 Phage integrase, N-terminal SAM-like domain K04763 GO:0000150,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009314,GO:0009628,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0071139,GO:0071704,GO:0090304,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 396.0
BYD1_k127_293697_54 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 379.0
BYD1_k127_293697_55 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0050896,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 372.0
BYD1_k127_293697_56 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 371.0
BYD1_k127_293697_57 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 362.0
BYD1_k127_293697_58 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006694 368.0
BYD1_k127_293697_59 e3 binding domain K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 366.0
BYD1_k127_293697_6 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K15022 - 1.17.1.10 8.018e-293 909.0
BYD1_k127_293697_60 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 351.0
BYD1_k127_293697_61 Aminotransferase class-V K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 357.0
BYD1_k127_293697_62 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 349.0
BYD1_k127_293697_63 Acyl-CoA thioesterase K10805 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 344.0
BYD1_k127_293697_64 Reduces the stability of FtsZ polymers in the presence of ATP K06916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044424,GO:0044464,GO:0051301 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 362.0
BYD1_k127_293697_65 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 331.0
BYD1_k127_293697_66 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 325.0
BYD1_k127_293697_67 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 349.0
BYD1_k127_293697_68 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002255 319.0
BYD1_k127_293697_69 Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006105 321.0
BYD1_k127_293697_7 Heat shock 70 kDa protein K04043 - - 3.741e-277 859.0
BYD1_k127_293697_70 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 311.0
BYD1_k127_293697_71 glutathione transferase activity K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006891 299.0
BYD1_k127_293697_72 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 296.0
BYD1_k127_293697_73 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 294.0
BYD1_k127_293697_74 phenylacetic acid degradation protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 291.0
BYD1_k127_293697_75 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001132 291.0
BYD1_k127_293697_76 Oxidoreductase FAD-binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002321 291.0
BYD1_k127_293697_77 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000115 276.0
BYD1_k127_293697_78 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003096 277.0
BYD1_k127_293697_79 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009519 275.0
BYD1_k127_293697_8 dehydrogenase, E1 component K11381 - 1.2.4.4 5.626e-276 869.0
BYD1_k127_293697_80 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001747 269.0
BYD1_k127_293697_81 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003583 265.0
BYD1_k127_293697_82 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000002342 263.0
BYD1_k127_293697_83 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000001634 252.0
BYD1_k127_293697_84 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000003508 228.0
BYD1_k127_293697_85 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000002251 248.0
BYD1_k127_293697_86 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000002292 235.0
BYD1_k127_293697_87 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000104 226.0
BYD1_k127_293697_88 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000000000000001083 217.0
BYD1_k127_293697_89 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000002568 225.0
BYD1_k127_293697_9 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 6.573e-275 858.0
BYD1_k127_293697_90 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000000002017 212.0
BYD1_k127_293697_91 Nudix hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000003993 208.0
BYD1_k127_293697_92 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000002522 203.0
BYD1_k127_293697_93 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) - - - 0.0000000000000000000000000000000000000000000000000000003719 196.0
BYD1_k127_293697_94 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000001945 199.0
BYD1_k127_293697_95 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000004959 192.0
BYD1_k127_293697_96 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding K01647,K22491 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000001228 201.0
BYD1_k127_293697_97 COG2335 Secreted and surface protein containing fasciclin-like repeats - - - 0.00000000000000000000000000000000000000000000000004613 184.0
BYD1_k127_293697_98 Pfam:DUF59 K02612 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000007698 182.0
BYD1_k127_293697_99 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000008579 186.0
BYD1_k127_3019959_0 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 381.0
BYD1_k127_3019959_1 Sigma-70 region 2 - - - 0.00000000000000000000000000001618 124.0
BYD1_k127_3019959_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.00005724 46.0
BYD1_k127_3024958_0 Peptidase family M49 - - - 2.84e-214 689.0
BYD1_k127_3024958_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 2.376e-196 619.0
BYD1_k127_3024958_10 Phytanoyl-CoA dioxygenase (PhyH) K00477 - 1.14.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 319.0
BYD1_k127_3024958_11 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002551 293.0
BYD1_k127_3024958_12 Peptidase family S51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004142 268.0
BYD1_k127_3024958_13 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000004668 189.0
BYD1_k127_3024958_14 DoxX-like family K15977 - - 0.000000000000000000000000000000000000000000000004271 182.0
BYD1_k127_3024958_15 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000001546 181.0
BYD1_k127_3024958_16 - - - - 0.000000000000000000000000000007999 121.0
BYD1_k127_3024958_17 - - - - 0.0000000000000000000000004022 119.0
BYD1_k127_3024958_18 Diguanylate cyclase - - - 0.0000000103 60.0
BYD1_k127_3024958_19 SnoaL-like domain - - - 0.00000003734 60.0
BYD1_k127_3024958_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 574.0
BYD1_k127_3024958_20 Transcriptional regulatory protein, C terminal - - - 0.000001284 61.0
BYD1_k127_3024958_3 Amidohydrolase family K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 551.0
BYD1_k127_3024958_4 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 511.0
BYD1_k127_3024958_5 ribosomal rna small subunit methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 464.0
BYD1_k127_3024958_6 peptidase S9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 475.0
BYD1_k127_3024958_7 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 404.0
BYD1_k127_3024958_8 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009851 423.0
BYD1_k127_3024958_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 370.0
BYD1_k127_316235_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1583.0
BYD1_k127_316235_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.525e-309 957.0
BYD1_k127_316235_10 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 GO:0000050,GO:0003674,GO:0003824,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006541,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0032991,GO:0034641,GO:0034654,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 342.0
BYD1_k127_316235_11 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 324.0
BYD1_k127_316235_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 306.0
BYD1_k127_316235_13 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 305.0
BYD1_k127_316235_14 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000005817 267.0
BYD1_k127_316235_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002957 250.0
BYD1_k127_316235_16 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000003376 240.0
BYD1_k127_316235_17 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000001436 239.0
BYD1_k127_316235_18 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000002481 202.0
BYD1_k127_316235_19 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000007049 213.0
BYD1_k127_316235_2 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 3.164e-257 814.0
BYD1_k127_316235_20 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000007227 190.0
BYD1_k127_316235_21 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000004595 153.0
BYD1_k127_316235_22 RNA-binding protein K07574 - - 0.000000000000000000000007471 105.0
BYD1_k127_316235_23 Preprotein translocase subunit SecG K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000003994 102.0
BYD1_k127_316235_24 - - - - 0.00000001899 57.0
BYD1_k127_316235_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 1.145e-239 745.0
BYD1_k127_316235_4 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 5.394e-221 725.0
BYD1_k127_316235_5 NADH ubiquinone oxidoreductase subunit K00342 - 1.6.5.3 2.552e-219 691.0
BYD1_k127_316235_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 2.14e-204 643.0
BYD1_k127_316235_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009086 525.0
BYD1_k127_316235_8 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 485.0
BYD1_k127_316235_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 443.0
BYD1_k127_3289395_0 Belongs to the catalase family K03781 - 1.11.1.6 0.0 1085.0
BYD1_k127_3289395_1 (ABC) transporter K06147,K06148 - - 1.344e-288 898.0
BYD1_k127_3289395_10 PFAM Beta-lactamase - - - 2.048e-207 677.0
BYD1_k127_3289395_100 - - - - 0.00000000001565 72.0
BYD1_k127_3289395_102 Domain of unknown function (DUF4136) - - - 0.000000001199 68.0
BYD1_k127_3289395_103 Beta-lactamase - - - 0.00000001519 59.0
BYD1_k127_3289395_105 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000108 58.0
BYD1_k127_3289395_11 choline dehydrogenase activity - - - 1.413e-206 665.0
BYD1_k127_3289395_12 amidohydrolase - - - 7.209e-196 621.0
BYD1_k127_3289395_13 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 569.0
BYD1_k127_3289395_14 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 550.0
BYD1_k127_3289395_15 Belongs to the amidase family K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 535.0
BYD1_k127_3289395_16 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 509.0
BYD1_k127_3289395_17 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 505.0
BYD1_k127_3289395_18 alpha beta - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 507.0
BYD1_k127_3289395_19 Zn-dependent dipeptidase, microsomal dipeptidase K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 490.0
BYD1_k127_3289395_2 TonB-dependent receptor - - - 4.092e-239 762.0
BYD1_k127_3289395_20 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 487.0
BYD1_k127_3289395_21 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 493.0
BYD1_k127_3289395_22 E COG0620 Methionine synthase II (cobalamin-independent) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 509.0
BYD1_k127_3289395_23 Aminotransferase, class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 468.0
BYD1_k127_3289395_24 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 462.0
BYD1_k127_3289395_25 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 453.0
BYD1_k127_3289395_26 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 449.0
BYD1_k127_3289395_27 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 456.0
BYD1_k127_3289395_28 Mo-co oxidoreductase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 435.0
BYD1_k127_3289395_29 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 426.0
BYD1_k127_3289395_3 Hydrolase CocE NonD family - - - 4.056e-236 756.0
BYD1_k127_3289395_30 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 444.0
BYD1_k127_3289395_31 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 398.0
BYD1_k127_3289395_32 Carbohydrate family 9 binding domain-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005462 400.0
BYD1_k127_3289395_33 MTH538 TIR-like domain (DUF1863) K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 398.0
BYD1_k127_3289395_34 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 377.0
BYD1_k127_3289395_35 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004538 363.0
BYD1_k127_3289395_36 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 363.0
BYD1_k127_3289395_37 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 391.0
BYD1_k127_3289395_38 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 361.0
BYD1_k127_3289395_39 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001945 374.0
BYD1_k127_3289395_4 Beta-lactamase - - - 1.316e-235 750.0
BYD1_k127_3289395_40 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 364.0
BYD1_k127_3289395_41 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 344.0
BYD1_k127_3289395_42 Conserved TM helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002559 333.0
BYD1_k127_3289395_43 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 346.0
BYD1_k127_3289395_44 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 325.0
BYD1_k127_3289395_45 ribosomal rna small subunit methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008914 322.0
BYD1_k127_3289395_46 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 311.0
BYD1_k127_3289395_47 NADP oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 302.0
BYD1_k127_3289395_48 citrate synthase K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 311.0
BYD1_k127_3289395_49 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 297.0
BYD1_k127_3289395_5 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 6.434e-232 759.0
BYD1_k127_3289395_50 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 297.0
BYD1_k127_3289395_51 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003533 289.0
BYD1_k127_3289395_52 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000546 305.0
BYD1_k127_3289395_53 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007581 282.0
BYD1_k127_3289395_54 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007859 269.0
BYD1_k127_3289395_55 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000001234 270.0
BYD1_k127_3289395_56 Belongs to the GST superfamily K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000001504 265.0
BYD1_k127_3289395_57 Belongs to the WrbA family K03809 GO:0000166,GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0010181,GO:0016043,GO:0016491,GO:0016651,GO:0016655,GO:0022607,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050662,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000002434 268.0
BYD1_k127_3289395_58 serine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003436 280.0
BYD1_k127_3289395_59 belongs to the nudix hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003215 263.0
BYD1_k127_3289395_6 Subtilase family - - - 4.58e-228 730.0
BYD1_k127_3289395_60 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000004709 258.0
BYD1_k127_3289395_61 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000000000008912 232.0
BYD1_k127_3289395_62 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001425 241.0
BYD1_k127_3289395_63 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000000000000000005869 231.0
BYD1_k127_3289395_64 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000008306 223.0
BYD1_k127_3289395_65 TIGRFAM beta-ketoadipate pathway transcriptional regulators, PcaR PcaU PobR family K02624 - - 0.000000000000000000000000000000000000000000000000000000000002139 218.0
BYD1_k127_3289395_66 Papain-like cysteine protease AvrRpt2 - - - 0.0000000000000000000000000000000000000000000000000000000001129 211.0
BYD1_k127_3289395_67 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000000006456 201.0
BYD1_k127_3289395_68 KR domain - - - 0.000000000000000000000000000000000000000000000000000006049 198.0
BYD1_k127_3289395_69 Glyoxalase-like domain K08234 - - 0.000000000000000000000000000000000000000000000000003833 185.0
BYD1_k127_3289395_7 Sodium:sulfate symporter transmembrane region - - - 9.884e-228 721.0
BYD1_k127_3289395_70 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000006751 203.0
BYD1_k127_3289395_71 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000000619 183.0
BYD1_k127_3289395_72 Cupin domain - - - 0.0000000000000000000000000000000000000000000000007045 184.0
BYD1_k127_3289395_73 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000004335 172.0
BYD1_k127_3289395_74 Sortilin, neurotensin receptor 3, - - - 0.00000000000000000000000000000000000000000001516 181.0
BYD1_k127_3289395_75 - - - - 0.000000000000000000000000000000000000000001577 169.0
BYD1_k127_3289395_76 - - - - 0.00000000000000000000000000000000000000002342 165.0
BYD1_k127_3289395_77 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000004406 162.0
BYD1_k127_3289395_78 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000000002053 152.0
BYD1_k127_3289395_79 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000001491 147.0
BYD1_k127_3289395_8 TonB-dependent receptor plug - - - 1.017e-213 689.0
BYD1_k127_3289395_80 ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000002597 147.0
BYD1_k127_3289395_81 Transcription elongation factor, GreA/GreB, C-term - - - 0.000000000000000000000000000000000004276 141.0
BYD1_k127_3289395_82 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000000006129 149.0
BYD1_k127_3289395_83 Lysophospholipase - GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0008150,GO:0008152,GO:0016020,GO:0016298,GO:0016787,GO:0016788,GO:0044238,GO:0071704 - 0.00000000000000000000000000000000002672 146.0
BYD1_k127_3289395_84 Transglycosylase associated protein - - - 0.0000000000000000000000000000000002899 136.0
BYD1_k127_3289395_85 Domain of unknown function (DUF4440) - - - 0.000000000000000000000000000000001557 141.0
BYD1_k127_3289395_86 Gluconate 2-dehydrogenase subunit 3 K06152 - 1.1.99.3 0.000000000000000000000000000000002955 137.0
BYD1_k127_3289395_87 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000007095 132.0
BYD1_k127_3289395_88 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000001524 132.0
BYD1_k127_3289395_89 Indole-3-glycerol phosphate synthase - - - 0.00000000000000000000000000000003518 144.0
BYD1_k127_3289395_9 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 3.028e-211 684.0
BYD1_k127_3289395_90 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.0000000000000000000000000000002426 128.0
BYD1_k127_3289395_91 - - - - 0.00000000000000000000000000009459 126.0
BYD1_k127_3289395_92 - - - - 0.00000000000000000000000007575 110.0
BYD1_k127_3289395_93 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000008522 116.0
BYD1_k127_3289395_94 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.0000000000000000000000001273 115.0
BYD1_k127_3289395_95 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.00000000000000000000002322 108.0
BYD1_k127_3289395_96 Protein of unknown function (DUF3309) - - - 0.00000000000000000232 88.0
BYD1_k127_3289395_97 Cytochrome c - - - 0.000000000000001106 86.0
BYD1_k127_3289395_98 - - - - 0.000000000000004109 83.0
BYD1_k127_3332422_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 7.688e-237 752.0
BYD1_k127_3332422_1 Pro-apoptotic serine protease nma111. Source PGD - - - 2.941e-236 766.0
BYD1_k127_3332422_10 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 383.0
BYD1_k127_3332422_11 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 340.0
BYD1_k127_3332422_12 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 344.0
BYD1_k127_3332422_13 Belongs to the SUA5 family K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 324.0
BYD1_k127_3332422_14 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 330.0
BYD1_k127_3332422_15 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 322.0
BYD1_k127_3332422_16 TIGRFAM type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 312.0
BYD1_k127_3332422_17 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 285.0
BYD1_k127_3332422_18 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003406 280.0
BYD1_k127_3332422_19 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000002535 228.0
BYD1_k127_3332422_2 Sugar (and other) transporter - - - 5.92e-208 661.0
BYD1_k127_3332422_20 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.0000000000000000000000000000000000000000000000000000000000006808 214.0
BYD1_k127_3332422_21 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000001556 207.0
BYD1_k127_3332422_22 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000004337 205.0
BYD1_k127_3332422_23 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.000000000000000000000000000000000000000000000000000001128 203.0
BYD1_k127_3332422_24 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000001314 181.0
BYD1_k127_3332422_25 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000002608 176.0
BYD1_k127_3332422_26 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000006495 151.0
BYD1_k127_3332422_27 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000000000000009904 136.0
BYD1_k127_3332422_28 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000009013 135.0
BYD1_k127_3332422_29 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000001592 126.0
BYD1_k127_3332422_3 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 602.0
BYD1_k127_3332422_30 Belongs to the UPF0149 family K09895 - - 0.0000000000000000000005413 106.0
BYD1_k127_3332422_31 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000006427 98.0
BYD1_k127_3332422_4 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 599.0
BYD1_k127_3332422_5 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 572.0
BYD1_k127_3332422_6 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 477.0
BYD1_k127_3332422_7 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 430.0
BYD1_k127_3332422_8 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 414.0
BYD1_k127_3332422_9 ABC transporter substrate-binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 382.0
BYD1_k127_3339561_0 COG2513 PEP phosphonomutase and related enzymes K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046487,GO:0071704 4.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 293.0
BYD1_k127_3339561_1 Bacterial regulatory helix-turn-helix protein, lysR family K21645 - - 0.00000000001368 70.0
BYD1_k127_3460328_0 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 311.0
BYD1_k127_3460328_1 Protein of unknown function (DUF3570) - - - 0.0000000000000000000000000000000000000000001896 162.0
BYD1_k127_3484673_0 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 514.0
BYD1_k127_3484673_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 357.0
BYD1_k127_3484673_2 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 324.0
BYD1_k127_3484673_3 - - - - 0.000000000000000000000000000000000000002692 151.0
BYD1_k127_3484673_4 Domain of unknown function (DUF4386) - - - 0.000000000000000000000000000000000005017 145.0
BYD1_k127_3484673_5 - - - - 0.0000000000000000000000002051 113.0
BYD1_k127_3484673_6 - - - - 0.0000000000000000000000007759 114.0
BYD1_k127_3484673_7 membrane protein (DUF2306) - - - 0.00000000000000001755 83.0
BYD1_k127_3484673_8 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00004073 54.0
BYD1_k127_3701072_0 Prokaryotic glutathione synthetase, ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0 1533.0
BYD1_k127_3701072_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1128.0
BYD1_k127_3701072_10 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 528.0
BYD1_k127_3701072_11 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 523.0
BYD1_k127_3701072_12 Mur ligase family, glutamate ligase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 520.0
BYD1_k127_3701072_13 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 491.0
BYD1_k127_3701072_14 Binding-protein-dependent transport system inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 470.0
BYD1_k127_3701072_15 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 437.0
BYD1_k127_3701072_16 twitching motility protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000293 422.0
BYD1_k127_3701072_17 Peptidase family S51 K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 406.0
BYD1_k127_3701072_18 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 405.0
BYD1_k127_3701072_19 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 402.0
BYD1_k127_3701072_2 response regulator receiver K02487,K06596 - - 1.656e-308 1017.0
BYD1_k127_3701072_20 chemotaxis protein K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005648 413.0
BYD1_k127_3701072_21 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 389.0
BYD1_k127_3701072_22 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 371.0
BYD1_k127_3701072_23 receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 379.0
BYD1_k127_3701072_24 Oxidoreductase FAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009237 357.0
BYD1_k127_3701072_25 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 303.0
BYD1_k127_3701072_26 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 298.0
BYD1_k127_3701072_27 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 301.0
BYD1_k127_3701072_28 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002507 285.0
BYD1_k127_3701072_29 Inositol monophosphatase family K05602 - 3.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003085 285.0
BYD1_k127_3701072_3 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 1.454e-215 679.0
BYD1_k127_3701072_30 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003806 281.0
BYD1_k127_3701072_31 adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000001926 263.0
BYD1_k127_3701072_32 PFAM Short-chain dehydrogenase reductase SDR K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000005681 268.0
BYD1_k127_3701072_33 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000006332 254.0
BYD1_k127_3701072_34 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000004658 233.0
BYD1_k127_3701072_35 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000008162 235.0
BYD1_k127_3701072_36 aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000001208 256.0
BYD1_k127_3701072_37 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000001685 238.0
BYD1_k127_3701072_38 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000001354 229.0
BYD1_k127_3701072_39 response regulator receiver K02657 - - 0.0000000000000000000000000000000000000000000000000000000000004174 214.0
BYD1_k127_3701072_4 PFAM aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K00256,K07303 - 1.3.99.16 4.071e-209 679.0
BYD1_k127_3701072_40 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000669 229.0
BYD1_k127_3701072_41 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000009226 218.0
BYD1_k127_3701072_42 Periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000000000000000000000000000000004869 214.0
BYD1_k127_3701072_43 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000002835 204.0
BYD1_k127_3701072_44 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.0000000000000000000000000000000000000000000000000000002532 202.0
BYD1_k127_3701072_45 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000001859 188.0
BYD1_k127_3701072_46 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000003638 177.0
BYD1_k127_3701072_47 Peptidyl-prolyl cis-trans K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000001906 164.0
BYD1_k127_3701072_48 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000002271 156.0
BYD1_k127_3701072_49 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000000000006624 152.0
BYD1_k127_3701072_5 LOG family K06966 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016798,GO:0016799,GO:0044424,GO:0044444,GO:0044464,GO:0047405 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 581.0
BYD1_k127_3701072_50 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000001094 141.0
BYD1_k127_3701072_51 Two component signalling adaptor domain K02659 - - 0.00000000000000000000000000000000007565 140.0
BYD1_k127_3701072_52 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000001991 147.0
BYD1_k127_3701072_53 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000002699 122.0
BYD1_k127_3701072_54 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000002566 126.0
BYD1_k127_3701072_55 TIGRFAM TonB K03832 - - 0.00000000000000000000000007208 118.0
BYD1_k127_3701072_56 integral membrane protein K02221 - - 0.0000000000000000000000005899 110.0
BYD1_k127_3701072_57 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000002393 102.0
BYD1_k127_3701072_58 chemotaxis signal transduction protein K06598 - - 0.0000000000000000003787 102.0
BYD1_k127_3701072_59 Belongs to the bacterial histone-like protein family - - - 0.000000000000000001697 100.0
BYD1_k127_3701072_6 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 561.0
BYD1_k127_3701072_7 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000736 571.0
BYD1_k127_3701072_8 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 570.0
BYD1_k127_3701072_9 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005765 529.0
BYD1_k127_3933268_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.07e-223 696.0
BYD1_k127_3933268_1 amine dehydrogenase activity - - - 8.131e-205 654.0
BYD1_k127_3933268_10 PilZ domain - - - 0.0000006749 59.0
BYD1_k127_3933268_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 491.0
BYD1_k127_3933268_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 430.0
BYD1_k127_3933268_4 Alkaline phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 420.0
BYD1_k127_3933268_5 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 362.0
BYD1_k127_3933268_6 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000003521 255.0
BYD1_k127_3933268_7 - - - - 0.000000000000000000000000000000000000000000000000000000006988 211.0
BYD1_k127_3933268_8 Membrane K08983 - - 0.000000000000000003409 90.0
BYD1_k127_4008467_0 Prolyl oligopeptidase family - - - 7.463e-240 760.0
BYD1_k127_4008467_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 605.0
BYD1_k127_4008467_10 PFAM methyltransferase - - - 0.000000000000000000000000000000000000005834 155.0
BYD1_k127_4008467_11 - - - - 0.000000000001037 70.0
BYD1_k127_4008467_2 PFAM NAD-dependent epimerase dehydratase K08679 - 5.1.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 523.0
BYD1_k127_4008467_3 lytic transglycosylase K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 399.0
BYD1_k127_4008467_4 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 349.0
BYD1_k127_4008467_5 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342,K14159 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016787,GO:0016788,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0045004,GO:0045005,GO:0046483,GO:0050896,GO:0051716,GO:0061695,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7,3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 284.0
BYD1_k127_4008467_6 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009453 276.0
BYD1_k127_4008467_7 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000001449 281.0
BYD1_k127_4008467_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000001015 245.0
BYD1_k127_4008467_9 Phosphoglucose isomerase K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.000000000000000000000000000000000000000000000000000001787 199.0
BYD1_k127_4026245_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 2.557e-216 688.0
BYD1_k127_4026245_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 7.208e-195 623.0
BYD1_k127_4026245_2 exonuclease RecJ K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 541.0
BYD1_k127_4026245_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 480.0
BYD1_k127_4026245_4 Belongs to the GcvT family K06980 GO:0003674,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0019842,GO:0022607,GO:0031163,GO:0031406,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043177,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0071840,GO:0072341,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000009753 147.0
BYD1_k127_4026245_5 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000004189 102.0
BYD1_k127_4026245_6 succinate dehydrogenase K00241 - - 0.0000000000000000000401 104.0
BYD1_k127_4026245_7 Succinate dehydrogenase, hydrophobic anchor subunit K00242 - - 0.00000000000003931 79.0
BYD1_k127_4228300_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1266.0
BYD1_k127_4228300_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 6.617e-250 781.0
BYD1_k127_4228300_10 Major facilitator superfamily K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 449.0
BYD1_k127_4228300_11 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 383.0
BYD1_k127_4228300_12 GMC oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 374.0
BYD1_k127_4228300_13 taurine catabolism dioxygenase K00471 - 1.14.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 321.0
BYD1_k127_4228300_14 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 301.0
BYD1_k127_4228300_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001495 303.0
BYD1_k127_4228300_16 Phosphohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001597 275.0
BYD1_k127_4228300_17 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000005637 246.0
BYD1_k127_4228300_18 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000001335 239.0
BYD1_k127_4228300_19 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000002315 253.0
BYD1_k127_4228300_2 MatE - - - 2.602e-239 746.0
BYD1_k127_4228300_20 permease K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000001619 235.0
BYD1_k127_4228300_21 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000002117 229.0
BYD1_k127_4228300_22 PFAM acid phosphatase (Class B) - - - 0.000000000000000000000000000000000000000000000000000000135 205.0
BYD1_k127_4228300_23 Permease YjgP YjgQ K11720 - - 0.0000000000000000000000000000000000000000000000000000008215 216.0
BYD1_k127_4228300_24 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.00000000000000000000000000000000000000000000000000001036 209.0
BYD1_k127_4228300_25 Glucose-regulated metallo-peptidase M90 K09933 - - 0.00000000000000000000000000000000000000000000000000002027 215.0
BYD1_k127_4228300_26 Belongs to the DnaA family. HdA subfamily K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000000005633 185.0
BYD1_k127_4228300_27 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000006201 157.0
BYD1_k127_4228300_28 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000003368 161.0
BYD1_k127_4228300_29 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000002121 145.0
BYD1_k127_4228300_3 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.343e-237 745.0
BYD1_k127_4228300_31 protein conserved in bacteria K09938 - - 0.000000000000000000000000001065 128.0
BYD1_k127_4228300_32 Glycosyltransferase like family K07011 - - 0.00000000000000000000000001629 122.0
BYD1_k127_4228300_33 DNA polymerase III, chi subunit K02339 GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 0.000000000000000000000002936 108.0
BYD1_k127_4228300_34 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.0000000000000000005811 90.0
BYD1_k127_4228300_35 pfam rdd - - - 0.0000000000000000006505 93.0
BYD1_k127_4228300_4 Beta-eliminating lyase K01667 - 4.1.99.1 4.961e-208 654.0
BYD1_k127_4228300_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0001073,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004177,GO:0005488,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006351,GO:0006355,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009056,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016787,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019538,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042150,GO:0043170,GO:0043171,GO:0043244,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140096,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1903506,GO:2000112,GO:2001141 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 483.0
BYD1_k127_4228300_6 PFAM transglutaminase domain protein K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 492.0
BYD1_k127_4228300_7 COG5598 Trimethylamine corrinoid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 477.0
BYD1_k127_4228300_8 AIR synthase related protein, C-terminal K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 445.0
BYD1_k127_4228300_9 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 441.0
BYD1_k127_4402950_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1504.0
BYD1_k127_4402950_1 Domain of unknown function DUF11 - - - 0.0 1411.0
BYD1_k127_4402950_10 receptor K16090 - - 4.253e-252 796.0
BYD1_k127_4402950_100 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000007939 160.0
BYD1_k127_4402950_101 alpha beta - - - 0.00000000000000000000000000000000000000000008425 165.0
BYD1_k127_4402950_102 ADP-ribosylglycohydrolase - - - 0.00000000000000000000000000000000000000001075 176.0
BYD1_k127_4402950_103 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000001682 155.0
BYD1_k127_4402950_104 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000002011 156.0
BYD1_k127_4402950_105 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.0000000000000000000000000000000000000002535 167.0
BYD1_k127_4402950_106 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000002077 160.0
BYD1_k127_4402950_107 synthesis repressor, PhaR - - - 0.000000000000000000000000000000000000003459 151.0
BYD1_k127_4402950_108 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000000000000001128 153.0
BYD1_k127_4402950_109 PadR family transcriptional regulator K10947 - - 0.00000000000000000000000000000000004412 138.0
BYD1_k127_4402950_11 Proton-conducting membrane transporter K12141 - - 6.408e-247 781.0
BYD1_k127_4402950_110 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000006594 126.0
BYD1_k127_4402950_111 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000001045 133.0
BYD1_k127_4402950_112 - - - - 0.0000000000000000000000000000001221 129.0
BYD1_k127_4402950_113 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000000421 118.0
BYD1_k127_4402950_114 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000004644 135.0
BYD1_k127_4402950_115 Transcriptional regulator - - - 0.0000000000000000000000000001136 119.0
BYD1_k127_4402950_116 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000003336 119.0
BYD1_k127_4402950_117 PFAM Class I peptide chain release factor K15034 - - 0.00000000000000000000000001492 114.0
BYD1_k127_4402950_118 Cysteine methyltransferase K07443 - - 0.00000000000000000000000004391 111.0
BYD1_k127_4402950_119 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000002029 121.0
BYD1_k127_4402950_12 exporters of the RND superfamily K07003 - - 4.338e-246 784.0
BYD1_k127_4402950_120 - - - - 0.0000000000000000000000003967 115.0
BYD1_k127_4402950_121 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000001676 110.0
BYD1_k127_4402950_122 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000002282 100.0
BYD1_k127_4402950_123 - - - - 0.0000000000000000001597 99.0
BYD1_k127_4402950_124 Mj0042 family finger-like - - - 0.00000000000000001356 96.0
BYD1_k127_4402950_125 Lysyl oxidase - - - 0.00000000000000003432 93.0
BYD1_k127_4402950_126 small protein containing a coiled-coil domain - - - 0.0000000000000002168 81.0
BYD1_k127_4402950_127 polyhydroxyalkanoic acid - - - 0.0000000000001293 76.0
BYD1_k127_4402950_129 helix_turn_helix, Lux Regulon K02479,K07684 - - 0.00000000000119 78.0
BYD1_k127_4402950_13 dihydroorotase - - - 3.967e-235 759.0
BYD1_k127_4402950_130 domain, Protein K03615,K09690 - - 0.000000000001415 81.0
BYD1_k127_4402950_132 SMART Water Stress and Hypersensitive response - - - 0.000000000005812 73.0
BYD1_k127_4402950_133 - - - - 0.000000001208 68.0
BYD1_k127_4402950_134 Protein of unknown function (DUF3187) - - - 0.00000000167 69.0
BYD1_k127_4402950_135 Protein of unknown function (DUF3301) - - - 0.0000008965 61.0
BYD1_k127_4402950_136 - - - - 0.00002284 55.0
BYD1_k127_4402950_137 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0003186 52.0
BYD1_k127_4402950_138 Gram-negative bacterial TonB protein C-terminal - - - 0.0004234 51.0
BYD1_k127_4402950_139 Protein of unknown function (DUF1566) - - - 0.000543 50.0
BYD1_k127_4402950_14 NADH-ubiquinone oxidoreductase chain 49kDa - - - 1.763e-234 747.0
BYD1_k127_4402950_15 uracil, thiamine, allantoin K03457 - - 4.565e-230 721.0
BYD1_k127_4402950_16 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 2.211e-228 715.0
BYD1_k127_4402950_17 Homospermidine synthase K00808 - 2.5.1.44 2.372e-227 713.0
BYD1_k127_4402950_18 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 3.628e-217 680.0
BYD1_k127_4402950_19 Dihydroorotate dehydrogenase - - - 4.591e-217 685.0
BYD1_k127_4402950_2 Hydantoinase/oxoprolinase N-terminal region - - - 0.0 1269.0
BYD1_k127_4402950_20 peptidase K07386 - - 6.094e-209 670.0
BYD1_k127_4402950_21 Tetratricopeptide repeat - - - 8.31e-208 663.0
BYD1_k127_4402950_22 Glucose / Sorbosone dehydrogenase - - - 3.842e-206 651.0
BYD1_k127_4402950_23 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 5.664e-205 651.0
BYD1_k127_4402950_24 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 2.333e-203 667.0
BYD1_k127_4402950_25 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 6.852e-200 667.0
BYD1_k127_4402950_26 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 5.832e-196 623.0
BYD1_k127_4402950_27 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 585.0
BYD1_k127_4402950_28 cystathionine K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 579.0
BYD1_k127_4402950_29 Cystathionine beta-synthase K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 584.0
BYD1_k127_4402950_3 Tetratricopeptide repeat - - - 1.004e-311 1021.0
BYD1_k127_4402950_30 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008384 561.0
BYD1_k127_4402950_31 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008665 553.0
BYD1_k127_4402950_32 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 572.0
BYD1_k127_4402950_33 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 547.0
BYD1_k127_4402950_34 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 548.0
BYD1_k127_4402950_35 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 518.0
BYD1_k127_4402950_36 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 512.0
BYD1_k127_4402950_37 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 527.0
BYD1_k127_4402950_38 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 489.0
BYD1_k127_4402950_39 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 493.0
BYD1_k127_4402950_4 TonB dependent receptor - - - 1.197e-311 985.0
BYD1_k127_4402950_40 Carbon-nitrogen hydrolase K01431 - 3.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 476.0
BYD1_k127_4402950_41 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 475.0
BYD1_k127_4402950_42 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 449.0
BYD1_k127_4402950_43 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 439.0
BYD1_k127_4402950_44 Protein of unknown function (DUF1302) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 429.0
BYD1_k127_4402950_45 L,D-transpeptidase catalytic domain K21470 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 440.0
BYD1_k127_4402950_46 beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 398.0
BYD1_k127_4402950_47 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 391.0
BYD1_k127_4402950_48 alpha/beta hydrolase fold K03821 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 400.0
BYD1_k127_4402950_49 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 399.0
BYD1_k127_4402950_5 OmpA family - - - 3.984e-311 999.0
BYD1_k127_4402950_50 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007972 388.0
BYD1_k127_4402950_51 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 394.0
BYD1_k127_4402950_52 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 360.0
BYD1_k127_4402950_53 COG0277 FAD FMN-containing dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 366.0
BYD1_k127_4402950_54 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 355.0
BYD1_k127_4402950_55 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 345.0
BYD1_k127_4402950_56 Peptidase S15 K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 346.0
BYD1_k127_4402950_57 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 326.0
BYD1_k127_4402950_58 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 331.0
BYD1_k127_4402950_59 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 323.0
BYD1_k127_4402950_6 Proton-conducting membrane transporter - - - 3.22e-296 926.0
BYD1_k127_4402950_60 Phage tail sheath C-terminal domain K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 320.0
BYD1_k127_4402950_61 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 321.0
BYD1_k127_4402950_62 Inositol monophosphatase family K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 302.0
BYD1_k127_4402950_63 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 315.0
BYD1_k127_4402950_64 Putative sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 305.0
BYD1_k127_4402950_65 Homocysteine S-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 295.0
BYD1_k127_4402950_66 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 300.0
BYD1_k127_4402950_67 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 289.0
BYD1_k127_4402950_68 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000318 275.0
BYD1_k127_4402950_69 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009124 286.0
BYD1_k127_4402950_7 WD40-like Beta Propeller Repeat - - - 2.562e-273 857.0
BYD1_k127_4402950_70 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001655 276.0
BYD1_k127_4402950_71 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004183 273.0
BYD1_k127_4402950_72 Alternative locus ID - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001814 271.0
BYD1_k127_4402950_73 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003972 268.0
BYD1_k127_4402950_74 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002545 271.0
BYD1_k127_4402950_75 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003123 271.0
BYD1_k127_4402950_76 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000469 269.0
BYD1_k127_4402950_77 MotA/TolQ/ExbB proton channel family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007161 258.0
BYD1_k127_4402950_78 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002394 258.0
BYD1_k127_4402950_79 PFAM helix-turn-helix- domain containing protein AraC type K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000005161 258.0
BYD1_k127_4402950_8 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.756e-269 837.0
BYD1_k127_4402950_80 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002942 252.0
BYD1_k127_4402950_81 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004169 241.0
BYD1_k127_4402950_82 pfam php K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000004814 249.0
BYD1_k127_4402950_83 PKHD-type hydroxylase K07336 - - 0.00000000000000000000000000000000000000000000000000000000000000000001753 239.0
BYD1_k127_4402950_84 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000216 227.0
BYD1_k127_4402950_85 - - - - 0.000000000000000000000000000000000000000000000000000000000000003542 230.0
BYD1_k127_4402950_86 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000006989 225.0
BYD1_k127_4402950_87 deaminase activity K01485 GO:0003674,GO:0003824,GO:0004131,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006206,GO:0006213,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009119,GO:0009451,GO:0009987,GO:0016070,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019239,GO:0019438,GO:0019858,GO:0034641,GO:0034654,GO:0043094,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046087,GO:0046131,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090304,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 3.5.4.1 0.00000000000000000000000000000000000000000000000000000000000001799 231.0
BYD1_k127_4402950_88 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000007375 225.0
BYD1_k127_4402950_89 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000001966 237.0
BYD1_k127_4402950_9 TonB dependent receptor K02014 - - 3.516e-258 815.0
BYD1_k127_4402950_90 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000006351 205.0
BYD1_k127_4402950_91 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001098 199.0
BYD1_k127_4402950_92 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000004352 195.0
BYD1_k127_4402950_93 - - - - 0.0000000000000000000000000000000000000000000000000165 190.0
BYD1_k127_4402950_94 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000003784 189.0
BYD1_k127_4402950_95 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.00000000000000000000000000000000000000000000004846 178.0
BYD1_k127_4402950_96 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000006108 181.0
BYD1_k127_4402950_97 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000681 172.0
BYD1_k127_4402950_98 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000000000000004278 169.0
BYD1_k127_4402950_99 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000326 165.0
BYD1_k127_4458771_0 Efflux pump membrane transporter K19585 - - 0.0 1473.0
BYD1_k127_4458771_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1152.0
BYD1_k127_4458771_10 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 516.0
BYD1_k127_4458771_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298,K19586 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 461.0
BYD1_k127_4458771_12 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 459.0
BYD1_k127_4458771_13 N-terminal domain of oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 392.0
BYD1_k127_4458771_14 Sodium:sulfate symporter transmembrane region K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 397.0
BYD1_k127_4458771_15 tryptophan 2,3-dioxygenase activity K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006671 389.0
BYD1_k127_4458771_16 surface antigen variable number repeat protein K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006207 406.0
BYD1_k127_4458771_17 PFAM cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 336.0
BYD1_k127_4458771_18 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005719 338.0
BYD1_k127_4458771_19 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 330.0
BYD1_k127_4458771_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 4.401e-252 785.0
BYD1_k127_4458771_20 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018065,GO:0018130,GO:0018160,GO:0018193,GO:0018198,GO:0019438,GO:0019538,GO:0033013,GO:0033014,GO:0034641,GO:0036211,GO:0042168,GO:0042440,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005877 323.0
BYD1_k127_4458771_21 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 305.0
BYD1_k127_4458771_22 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 300.0
BYD1_k127_4458771_23 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 293.0
BYD1_k127_4458771_24 hydrolase K16165 - 3.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001264 282.0
BYD1_k127_4458771_25 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001629 278.0
BYD1_k127_4458771_26 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003003 263.0
BYD1_k127_4458771_27 L,D-transpeptidase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005156 253.0
BYD1_k127_4458771_28 Protein of unknown function (DUF2950) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006751 252.0
BYD1_k127_4458771_29 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000001128 250.0
BYD1_k127_4458771_3 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 7.081e-240 764.0
BYD1_k127_4458771_30 Ceramidase - - - 0.000000000000000000000000000000000000000000000000000000000000000006766 235.0
BYD1_k127_4458771_31 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000001516 244.0
BYD1_k127_4458771_32 Response regulator of the LytR AlgR family K08083 - - 0.0000000000000000000000000000000000000000000000000000000000005704 232.0
BYD1_k127_4458771_33 COG2863 Cytochrome c553 - - - 0.00000000000000000000000000000000000000000000000002718 189.0
BYD1_k127_4458771_34 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000008807 186.0
BYD1_k127_4458771_35 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000008009 180.0
BYD1_k127_4458771_36 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000007419 181.0
BYD1_k127_4458771_37 protein possibly involved in aromatic compounds catabolism K19222 - 3.1.2.28 0.00000000000000000000000000000000000000000000001925 174.0
BYD1_k127_4458771_38 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000001009 188.0
BYD1_k127_4458771_39 Flagellar Assembly Protein A K09749 - - 0.000000000000000000000000000000000000000000008299 179.0
BYD1_k127_4458771_4 - - - - 3.122e-204 661.0
BYD1_k127_4458771_40 RES - - - 0.0000000000000000000000000000000000000001629 154.0
BYD1_k127_4458771_41 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000002322 160.0
BYD1_k127_4458771_42 heme oxygenase (decyclizing) activity - - - 0.000000000000000000000000000000000000003706 156.0
BYD1_k127_4458771_43 oxidase (Subunit iv) - - - 0.000000000000000000000000000000000002005 150.0
BYD1_k127_4458771_44 Ferredoxin - - - 0.0000000000000000000000000000000008412 139.0
BYD1_k127_4458771_45 Thiol disulfide interchange protein K03673 - - 0.000000000000000000000000000000004786 145.0
BYD1_k127_4458771_46 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000003452 126.0
BYD1_k127_4458771_47 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.00000000000000000000000000001286 128.0
BYD1_k127_4458771_48 COG3209 Rhs family protein - - - 0.0000000000000000000000000003911 135.0
BYD1_k127_4458771_49 cytochrome - - - 0.000000000000000000000000001472 121.0
BYD1_k127_4458771_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 4.492e-203 647.0
BYD1_k127_4458771_50 - - - - 0.00000000000000000000495 103.0
BYD1_k127_4458771_51 protein conserved in bacteria K09806 - - 0.00000000000000000002187 100.0
BYD1_k127_4458771_52 self proteolysis - - - 0.0000000000002381 86.0
BYD1_k127_4458771_54 Domain of unknown function (DUF4124) - - - 0.000007243 55.0
BYD1_k127_4458771_55 Protein of unknown function (DUF2845) - - - 0.00000958 53.0
BYD1_k127_4458771_56 general secretion pathway protein - - - 0.00004446 49.0
BYD1_k127_4458771_57 Tetratricopeptide repeat - - - 0.000885 46.0
BYD1_k127_4458771_6 PA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 640.0
BYD1_k127_4458771_7 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005868 602.0
BYD1_k127_4458771_8 Trehalase K01194 - 3.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005932 613.0
BYD1_k127_4458771_9 Insecticidal toxin complex protein TcaC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 643.0
BYD1_k127_4479368_0 COG1233 Phytoene dehydrogenase and related proteins - - - 2.375e-260 815.0
BYD1_k127_4479368_1 COG0457 FOG TPR repeat - - - 2.897e-243 772.0
BYD1_k127_4479368_10 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 305.0
BYD1_k127_4479368_11 COG0687 Spermidine putrescine-binding periplasmic protein K11073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009784 300.0
BYD1_k127_4479368_12 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000141 265.0
BYD1_k127_4479368_13 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000003128 210.0
BYD1_k127_4479368_14 BetI-type transcriptional repressor, C-terminal - - - 0.00000000000000000000000000000000000000000000000000001167 196.0
BYD1_k127_4479368_15 COG1233 Phytoene dehydrogenase and related proteins K10027,K10210 - 1.14.99.44,1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.0000000000000000000000002145 113.0
BYD1_k127_4479368_16 COG3000 Sterol desaturase - - - 0.00000000000002237 76.0
BYD1_k127_4479368_17 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.00002157 58.0
BYD1_k127_4479368_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 3.653e-205 646.0
BYD1_k127_4479368_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 612.0
BYD1_k127_4479368_4 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003376 610.0
BYD1_k127_4479368_5 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 507.0
BYD1_k127_4479368_6 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008995 457.0
BYD1_k127_4479368_7 Putrescine transport system permease K11075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 375.0
BYD1_k127_4479368_8 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479,K05549,K05708,K14748,K16319 - 1.14.12.1,1.14.12.10,1.14.12.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 377.0
BYD1_k127_4479368_9 ABC-type spermidine putrescine transport system, permease component II K11074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 325.0
BYD1_k127_4504322_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.479e-302 941.0
BYD1_k127_4504322_1 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 3.443e-253 791.0
BYD1_k127_4504322_10 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002586 271.0
BYD1_k127_4504322_11 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000001555 228.0
BYD1_k127_4504322_12 Sigma-70, region 4 - - - 0.00000000000000000000000000000000000000000000000000001236 194.0
BYD1_k127_4504322_13 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.00000000000000000000000000000000000000000000000000001258 204.0
BYD1_k127_4504322_14 ECF sigma factor - - - 0.0000000000000000000000000000000000000000000000001047 186.0
BYD1_k127_4504322_15 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000007974 186.0
BYD1_k127_4504322_16 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000002177 176.0
BYD1_k127_4504322_17 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.00000000000000000000000000000000000000000001851 166.0
BYD1_k127_4504322_18 proteolysis - - - 0.00000000000000000000000000000000000000000002942 178.0
BYD1_k127_4504322_19 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000001621 169.0
BYD1_k127_4504322_2 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 604.0
BYD1_k127_4504322_20 AntiSigma factor - - - 0.0000000000000000000000000000000000000000002192 171.0
BYD1_k127_4504322_21 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000001226 162.0
BYD1_k127_4504322_22 oxygen carrier activity K07216 - - 0.0000000000000000000000000001754 120.0
BYD1_k127_4504322_23 DNA-templated transcription, initiation K03088,K03091 - - 0.0000000000000000000000000001777 124.0
BYD1_k127_4504322_24 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000226 117.0
BYD1_k127_4504322_25 - - - - 0.00000000000000000000000003542 113.0
BYD1_k127_4504322_26 Pathogenicity locus - - - 0.0000000000000000000001674 100.0
BYD1_k127_4504322_27 salt-induced outer membrane protein K07283 - - 0.00000000000000000008906 91.0
BYD1_k127_4504322_28 - - - - 0.0000000000001854 73.0
BYD1_k127_4504322_29 FecR protein K07165 - - 0.00002776 57.0
BYD1_k127_4504322_3 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 529.0
BYD1_k127_4504322_30 SnoaL-like domain - - - 0.00005266 52.0
BYD1_k127_4504322_4 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 537.0
BYD1_k127_4504322_5 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 529.0
BYD1_k127_4504322_6 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 379.0
BYD1_k127_4504322_7 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 342.0
BYD1_k127_4504322_8 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 303.0
BYD1_k127_4504322_9 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001582 254.0
BYD1_k127_4665547_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1234.0
BYD1_k127_4665547_1 Belongs to the TPP enzyme family K03336 - 3.7.1.22 2.383e-231 731.0
BYD1_k127_4665547_10 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007823 540.0
BYD1_k127_4665547_11 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034203,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 526.0
BYD1_k127_4665547_12 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 499.0
BYD1_k127_4665547_13 Belongs to the arginase family K01476,K01480,K12255,K18459 - 3.5.3.1,3.5.3.11,3.5.3.17,3.5.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 470.0
BYD1_k127_4665547_14 3-phytase K01083 - 3.1.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 484.0
BYD1_k127_4665547_15 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005764 465.0
BYD1_k127_4665547_16 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 459.0
BYD1_k127_4665547_17 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 475.0
BYD1_k127_4665547_18 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 425.0
BYD1_k127_4665547_19 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 405.0
BYD1_k127_4665547_2 Major Facilitator Superfamily - - - 3.817e-231 747.0
BYD1_k127_4665547_20 acid phosphatase K14379 - 3.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 403.0
BYD1_k127_4665547_21 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 372.0
BYD1_k127_4665547_22 Oxidoreductase family, NAD-binding Rossmann fold K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 375.0
BYD1_k127_4665547_23 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 369.0
BYD1_k127_4665547_24 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006714 358.0
BYD1_k127_4665547_25 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 308.0
BYD1_k127_4665547_26 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 296.0
BYD1_k127_4665547_27 Helix-turn-helix domain, rpiR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007028 282.0
BYD1_k127_4665547_28 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000005384 289.0
BYD1_k127_4665547_29 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001618 273.0
BYD1_k127_4665547_3 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.948e-209 681.0
BYD1_k127_4665547_30 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000038 252.0
BYD1_k127_4665547_31 methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000108 249.0
BYD1_k127_4665547_32 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001984 245.0
BYD1_k127_4665547_33 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.0000000000000000000000000000000000000000000000000000000000000003322 251.0
BYD1_k127_4665547_34 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000000000000000000002578 204.0
BYD1_k127_4665547_35 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000007543 196.0
BYD1_k127_4665547_36 DoxX family K15977 - - 0.00000000000000000000000000000000000000000000009995 174.0
BYD1_k127_4665547_37 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000001735 170.0
BYD1_k127_4665547_38 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000003139 166.0
BYD1_k127_4665547_39 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852,K00856,K10710,K22026 - 2.7.1.15,2.7.1.20,2.7.1.213,2.7.1.218,2.7.1.73 0.000000000000000000000000000000000000000001442 179.0
BYD1_k127_4665547_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819,K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.13,2.6.1.17 4.964e-207 649.0
BYD1_k127_4665547_40 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000002364 149.0
BYD1_k127_4665547_41 PAP2 superfamily - - - 0.000000000000000000000000000000000000003298 160.0
BYD1_k127_4665547_42 Sodium proton antiporter, NhaD family - - - 0.00000000000000000000000000000000000002003 144.0
BYD1_k127_4665547_43 belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000002654 145.0
BYD1_k127_4665547_44 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000000000153 131.0
BYD1_k127_4665547_45 DNA-templated transcription, initiation K03088,K03091 - - 0.00000000000000000000000000000001672 135.0
BYD1_k127_4665547_46 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.00000000000000000000001325 107.0
BYD1_k127_4665547_47 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000005823 88.0
BYD1_k127_4665547_49 - - - - 0.00000003662 64.0
BYD1_k127_4665547_5 Sugar phosphate permease K02445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 607.0
BYD1_k127_4665547_50 Type II transport protein GspH K08084 - - 0.00000005927 61.0
BYD1_k127_4665547_51 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.000008958 57.0
BYD1_k127_4665547_52 Type IV Pilus-assembly protein W K02672 - - 0.000009012 58.0
BYD1_k127_4665547_54 Staphylococcal nuclease homologues - - - 0.00005064 49.0
BYD1_k127_4665547_55 Ribbon-helix-helix domain - - - 0.0001291 46.0
BYD1_k127_4665547_56 - - - - 0.0004045 50.0
BYD1_k127_4665547_6 PfkB domain protein K03338 - 2.7.1.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 627.0
BYD1_k127_4665547_7 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 622.0
BYD1_k127_4665547_8 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 558.0
BYD1_k127_4665547_9 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002916 572.0
BYD1_k127_4757984_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001936 329.0
BYD1_k127_4757984_1 Protein of unknown function (DUF1298) - - - 0.000000000000000264 85.0
BYD1_k127_4757984_2 RHS Repeat - - - 0.000000009253 64.0
BYD1_k127_4772091_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 3.873e-253 788.0
BYD1_k127_4772091_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 7.207e-252 784.0
BYD1_k127_4772091_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 376.0
BYD1_k127_4772091_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 322.0
BYD1_k127_4772091_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000783 176.0
BYD1_k127_4772091_5 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.00000000000000000000000000000000000000001954 157.0
BYD1_k127_4772091_6 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000249 157.0
BYD1_k127_4772091_7 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.00000000000000000000000000000000000000004203 163.0
BYD1_k127_4772091_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000006347 133.0
BYD1_k127_4772091_9 ATP synthase I chain K02116 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044464,GO:0044769,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000000003184 72.0
BYD1_k127_4842048_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 423.0
BYD1_k127_4842048_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002482 270.0
BYD1_k127_4842048_10 Resolvase - - - 0.0000004394 53.0
BYD1_k127_4842048_11 Protein of unknown function (DUF1566) - - - 0.00000457 57.0
BYD1_k127_4842048_2 Involved in the tonB-independent uptake of proteins K03641,K10117 - - 0.000000000000000000000000000000000000000000000000000000000000001144 238.0
BYD1_k127_4842048_3 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000000000000000001065 183.0
BYD1_k127_4842048_4 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000001223 190.0
BYD1_k127_4842048_5 Belongs to the small heat shock protein (HSP20) family - - - 0.000000000000000000000000000000000003058 142.0
BYD1_k127_4842048_6 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000001722 126.0
BYD1_k127_4842048_7 Protein of unknown function (DUF1566) - - - 0.000000000000001112 85.0
BYD1_k127_5040043_0 GTP-binding protein TypA K06207 - - 1.325e-204 646.0
BYD1_k127_5040043_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 451.0
BYD1_k127_5040043_2 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007827 374.0
BYD1_k127_5040043_3 two component, sigma54 specific, transcriptional regulator, Fis family K07714,K07715 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 374.0
BYD1_k127_5040043_4 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 349.0
BYD1_k127_5040043_5 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 349.0
BYD1_k127_5040043_6 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 313.0
BYD1_k127_5040043_7 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001765 274.0
BYD1_k127_5040043_8 - - - - 0.0000000000000005805 81.0
BYD1_k127_5201561_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1357.0
BYD1_k127_5201561_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1158.0
BYD1_k127_5201561_10 Type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 499.0
BYD1_k127_5201561_11 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 496.0
BYD1_k127_5201561_12 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 453.0
BYD1_k127_5201561_13 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 437.0
BYD1_k127_5201561_14 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002529 421.0
BYD1_k127_5201561_15 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 376.0
BYD1_k127_5201561_16 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000027,GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022607,GO:0022613,GO:0022618,GO:0031118,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 360.0
BYD1_k127_5201561_17 Rieske 2Fe-2S K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 349.0
BYD1_k127_5201561_18 Histidine kinase K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002998 350.0
BYD1_k127_5201561_19 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 313.0
BYD1_k127_5201561_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 2.323e-309 981.0
BYD1_k127_5201561_20 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 306.0
BYD1_k127_5201561_21 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 306.0
BYD1_k127_5201561_22 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 305.0
BYD1_k127_5201561_23 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006203 279.0
BYD1_k127_5201561_24 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003835 265.0
BYD1_k127_5201561_25 Protein of unknown function (DUF229) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001754 273.0
BYD1_k127_5201561_26 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003053 254.0
BYD1_k127_5201561_27 Membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009007 250.0
BYD1_k127_5201561_28 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000004577 239.0
BYD1_k127_5201561_29 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000007592 253.0
BYD1_k127_5201561_3 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 4.737e-253 800.0
BYD1_k127_5201561_30 ADP-L-glycero-beta-D-manno-heptose biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000001579 233.0
BYD1_k127_5201561_31 Flavoprotein K01598 - 4.1.1.36 0.000000000000000000000000000000000000000000000000000000000000005243 221.0
BYD1_k127_5201561_32 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000002095 224.0
BYD1_k127_5201561_33 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000608 208.0
BYD1_k127_5201561_34 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000006512 189.0
BYD1_k127_5201561_35 Domain of unknown function (DUF2520) - - - 0.00000000000000000000000000000000000000000000000007298 186.0
BYD1_k127_5201561_36 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000002512 164.0
BYD1_k127_5201561_37 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.0000000000000000000000000000000000000005016 160.0
BYD1_k127_5201561_38 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000004802 151.0
BYD1_k127_5201561_39 Pilin (bacterial filament) K02650,K02655 - - 0.00000000000000000000000000000000000006681 154.0
BYD1_k127_5201561_4 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 1.659e-223 707.0
BYD1_k127_5201561_40 DNA / pantothenate metabolism flavoprotein K21977 - 6.3.2.5 0.0000000000000000000000000001105 129.0
BYD1_k127_5201561_41 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000001776 120.0
BYD1_k127_5201561_42 Regulatory protein, FmdB family - - - 0.00000000000000000000000166 108.0
BYD1_k127_5201561_43 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.00000000000004424 83.0
BYD1_k127_5201561_5 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 8.801e-222 710.0
BYD1_k127_5201561_6 peptidase K01278 - 3.4.14.5 4.566e-221 709.0
BYD1_k127_5201561_7 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004671 601.0
BYD1_k127_5201561_8 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 544.0
BYD1_k127_5201561_9 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 508.0
BYD1_k127_5216195_0 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 538.0
BYD1_k127_5216195_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 443.0
BYD1_k127_5216195_2 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000000005331 153.0
BYD1_k127_5216195_3 protein conserved in bacteria K15539 - - 0.0000000000000000002358 99.0
BYD1_k127_5216195_4 protein conserved in bacteria - - - 0.0000000000000003448 83.0
BYD1_k127_5216195_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000002084 61.0
BYD1_k127_5378063_0 Sulfatase - - - 0.0 1226.0
BYD1_k127_5378063_1 aldehyde oxidase - - - 0.0 1216.0
BYD1_k127_5378063_10 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 548.0
BYD1_k127_5378063_11 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 550.0
BYD1_k127_5378063_12 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007494 552.0
BYD1_k127_5378063_13 Acetyl-CoA hydrolase/transferase C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 548.0
BYD1_k127_5378063_14 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009981 561.0
BYD1_k127_5378063_15 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 503.0
BYD1_k127_5378063_16 Belongs to the ALAD family K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 483.0
BYD1_k127_5378063_17 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 450.0
BYD1_k127_5378063_18 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004821 438.0
BYD1_k127_5378063_19 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 432.0
BYD1_k127_5378063_2 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.406e-286 902.0
BYD1_k127_5378063_20 response regulator receiver K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 427.0
BYD1_k127_5378063_21 Domain of unknown function DUF21 K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 417.0
BYD1_k127_5378063_22 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 412.0
BYD1_k127_5378063_23 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 387.0
BYD1_k127_5378063_24 asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 364.0
BYD1_k127_5378063_25 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 377.0
BYD1_k127_5378063_26 PFAM ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 359.0
BYD1_k127_5378063_27 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000628 340.0
BYD1_k127_5378063_28 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003058 340.0
BYD1_k127_5378063_29 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 327.0
BYD1_k127_5378063_3 peptidase S9 - - - 5.023e-278 870.0
BYD1_k127_5378063_30 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 319.0
BYD1_k127_5378063_31 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 317.0
BYD1_k127_5378063_32 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 314.0
BYD1_k127_5378063_33 Multidrug efflux pump K03327 GO:0003674,GO:0005215,GO:0006810,GO:0006855,GO:0008150,GO:0015238,GO:0015893,GO:0022857,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 319.0
BYD1_k127_5378063_34 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 308.0
BYD1_k127_5378063_35 Lysin motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 308.0
BYD1_k127_5378063_36 Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 298.0
BYD1_k127_5378063_37 Exodeoxyribonuclease IX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 299.0
BYD1_k127_5378063_38 PFAM HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 287.0
BYD1_k127_5378063_39 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004276 285.0
BYD1_k127_5378063_4 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 3.951e-220 701.0
BYD1_k127_5378063_40 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001127 285.0
BYD1_k127_5378063_41 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000009642 269.0
BYD1_k127_5378063_42 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001649 267.0
BYD1_k127_5378063_43 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000016 274.0
BYD1_k127_5378063_44 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000008855 262.0
BYD1_k127_5378063_45 2Fe-2S -binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001325 248.0
BYD1_k127_5378063_46 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000006744 239.0
BYD1_k127_5378063_47 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000002556 234.0
BYD1_k127_5378063_48 secretion protein K01993 - - 0.0000000000000000000000000000000000000000000000000000000000000000227 237.0
BYD1_k127_5378063_49 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000002626 210.0
BYD1_k127_5378063_5 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.074e-219 703.0
BYD1_k127_5378063_50 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000006447 207.0
BYD1_k127_5378063_51 Sugar (and other) transporter K07552 - - 0.000000000000000000000000000000000000000000000000003332 199.0
BYD1_k127_5378063_52 carbonic - - - 0.00000000000000000000000000000000000000000000000001569 197.0
BYD1_k127_5378063_53 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000002803 182.0
BYD1_k127_5378063_54 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000312 165.0
BYD1_k127_5378063_55 Prokaryotic cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000004532 167.0
BYD1_k127_5378063_56 Nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000002064 153.0
BYD1_k127_5378063_57 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000000000000000000000000000000000008425 149.0
BYD1_k127_5378063_58 Belongs to the Smg family K03747 - - 0.000000000000000000000000000000000000002371 156.0
BYD1_k127_5378063_59 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000001851 150.0
BYD1_k127_5378063_6 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.089e-212 676.0
BYD1_k127_5378063_60 Exopolysaccharide synthesis, ExoD - - - 0.000000000000000000000000000000000002308 151.0
BYD1_k127_5378063_61 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000000004653 122.0
BYD1_k127_5378063_62 Sporulation related domain - - - 0.00000000000000000000000000005451 132.0
BYD1_k127_5378063_63 Belongs to the UPF0312 family - - - 0.0000000000000000000000000009245 127.0
BYD1_k127_5378063_64 LemA family K03744 - - 0.00000000000000001836 91.0
BYD1_k127_5378063_65 PspC domain - - - 0.0000000000000001616 86.0
BYD1_k127_5378063_66 AntiSigma factor - - - 0.000000000000241 82.0
BYD1_k127_5378063_67 alpha/beta hydrolase fold - - - 0.000000000001244 76.0
BYD1_k127_5378063_69 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000001585 76.0
BYD1_k127_5378063_7 Peptidase S46 - - - 3.211e-199 642.0
BYD1_k127_5378063_70 - - - - 0.0000000003047 69.0
BYD1_k127_5378063_71 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000146 70.0
BYD1_k127_5378063_72 Domain of unknown function (DUF4390) - - - 0.000000001597 67.0
BYD1_k127_5378063_73 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000001008 61.0
BYD1_k127_5378063_74 - - - - 0.0000237 54.0
BYD1_k127_5378063_75 Belongs to the UPF0312 family - - - 0.00002793 56.0
BYD1_k127_5378063_76 - - - - 0.0005205 52.0
BYD1_k127_5378063_77 Integral membrane protein TerC family - - - 0.0005555 44.0
BYD1_k127_5378063_8 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 607.0
BYD1_k127_5378063_9 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 599.0
BYD1_k127_5954356_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 564.0
BYD1_k127_5954356_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003519 508.0
BYD1_k127_5954356_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 434.0
BYD1_k127_5954356_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 397.0
BYD1_k127_5954356_4 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000631 318.0
BYD1_k127_5954356_5 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000000000007554 190.0
BYD1_k127_5954356_6 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000003286 81.0
BYD1_k127_5954356_7 - - - - 0.0000000000003665 72.0
BYD1_k127_5998637_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 5.324e-290 897.0
BYD1_k127_5998637_1 TonB dependent receptor - - - 5.016e-259 833.0
BYD1_k127_5998637_10 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008333 443.0
BYD1_k127_5998637_11 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 413.0
BYD1_k127_5998637_12 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 386.0
BYD1_k127_5998637_13 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 376.0
BYD1_k127_5998637_14 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 347.0
BYD1_k127_5998637_15 Secreted protein, containing von Willebrand factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 320.0
BYD1_k127_5998637_16 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001736 292.0
BYD1_k127_5998637_17 von Willebrand factor (VWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007007 289.0
BYD1_k127_5998637_18 COG0811 Biopolymer transport proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002852 285.0
BYD1_k127_5998637_19 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003171 282.0
BYD1_k127_5998637_2 phosphoribosylamine-glycine ligase activity K01945,K01955 - 6.3.4.13,6.3.5.5 3.18e-203 639.0
BYD1_k127_5998637_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002897 265.0
BYD1_k127_5998637_21 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000195 260.0
BYD1_k127_5998637_22 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002994 265.0
BYD1_k127_5998637_23 NADPH-quinone reductase (modulator of drug activity B) - - - 0.00000000000000000000000000000000000000000000000000000000000000008126 227.0
BYD1_k127_5998637_24 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000008314 217.0
BYD1_k127_5998637_25 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000006757 202.0
BYD1_k127_5998637_26 - - - - 0.0000000000000000000000000000000000000000000000000001005 209.0
BYD1_k127_5998637_27 - - - - 0.00000000000000000000000000000000000000000000001026 180.0
BYD1_k127_5998637_28 - - - - 0.0000000000000000000000000000000000000000000009066 183.0
BYD1_k127_5998637_29 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000005572 170.0
BYD1_k127_5998637_3 histidine ammonia-lyase K01745 GO:0003674,GO:0003824,GO:0004397,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016840,GO:0016841,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 610.0
BYD1_k127_5998637_30 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000364 139.0
BYD1_k127_5998637_31 Belongs to the ompA family - - - 0.00000000000000000000003358 117.0
BYD1_k127_5998637_32 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.00000000000000000001069 99.0
BYD1_k127_5998637_33 - - - - 0.00000000000000005814 95.0
BYD1_k127_5998637_34 - - - - 0.00000000000009017 84.0
BYD1_k127_5998637_35 Bacterial protein of unknown function (DUF883) - - - 0.0000000000009008 77.0
BYD1_k127_5998637_36 - - - - 0.0000000004144 73.0
BYD1_k127_5998637_37 Protein of unknown function (DUF1328) - - - 0.000000002894 70.0
BYD1_k127_5998637_38 PFAM VanZ family protein - - - 0.000001034 61.0
BYD1_k127_5998637_39 PFAM ETC complex I subunit conserved region - - - 0.00001622 51.0
BYD1_k127_5998637_4 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 575.0
BYD1_k127_5998637_5 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 527.0
BYD1_k127_5998637_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 495.0
BYD1_k127_5998637_7 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 488.0
BYD1_k127_5998637_8 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 482.0
BYD1_k127_5998637_9 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006229 450.0
BYD1_k127_6123292_0 Flavin containing amine oxidoreductase - - - 1.072e-223 709.0
BYD1_k127_6123292_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 2.736e-208 656.0
BYD1_k127_6123292_2 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 370.0
BYD1_k127_6123292_3 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 290.0
BYD1_k127_6123603_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1048.0
BYD1_k127_6123603_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 1.412e-310 965.0
BYD1_k127_6123603_10 beta' subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006988 383.0
BYD1_k127_6123603_11 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004471 303.0
BYD1_k127_6123603_12 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001695 282.0
BYD1_k127_6123603_13 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008877 260.0
BYD1_k127_6123603_14 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000006389 218.0
BYD1_k127_6123603_15 - - - - 0.000000000000000000000000000000000000000000000225 182.0
BYD1_k127_6123603_17 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000007135 173.0
BYD1_k127_6123603_18 - - - - 0.0000000000000000000000000000000000000000001554 176.0
BYD1_k127_6123603_19 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000009521 151.0
BYD1_k127_6123603_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0003824,GO:0003924,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019538,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034645,GO:0036094,GO:0043021,GO:0043024,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 1.615e-272 862.0
BYD1_k127_6123603_20 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000001698 128.0
BYD1_k127_6123603_21 Cation transport regulator - - - 0.0000000000000000000000000000002056 130.0
BYD1_k127_6123603_22 Ribosomal_S15 K02956 - - 0.000000000000000000000000000008528 120.0
BYD1_k127_6123603_23 Methyltransferase domain protein - - - 0.00000000000000000000000000002954 127.0
BYD1_k127_6123603_24 sister chromatid segregation - - - 0.0000000000000000000000008018 111.0
BYD1_k127_6123603_25 - - - - 0.000000000000000000000003004 108.0
BYD1_k127_6123603_26 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.0000000000000000000005516 107.0
BYD1_k127_6123603_27 - - - - 0.000000000000000000001118 110.0
BYD1_k127_6123603_28 Proprotein convertase P-domain - - - 0.00000000000003479 85.0
BYD1_k127_6123603_29 Outer membrane lipoprotein - - - 0.000000001824 66.0
BYD1_k127_6123603_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.569e-265 834.0
BYD1_k127_6123603_30 protein containing a von Willebrand factor type A (vWA) domain K07114 - - 0.00003822 56.0
BYD1_k127_6123603_4 esterase - - - 4.901e-233 735.0
BYD1_k127_6123603_5 Participates in both transcription termination and antitermination K02600 - - 2.491e-215 689.0
BYD1_k127_6123603_6 peptidase M48, Ste24p - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 525.0
BYD1_k127_6123603_7 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 486.0
BYD1_k127_6123603_8 N-acyl-L-amino acid amidohydrolase K01436 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003848 482.0
BYD1_k127_6123603_9 succinylglutamate desuccinylase aspartoacylase K06987 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 410.0
BYD1_k127_6136823_0 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007501 441.0
BYD1_k127_6136823_1 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000008671 170.0
BYD1_k127_635843_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1069.0
BYD1_k127_635843_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.068e-200 647.0
BYD1_k127_635843_10 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000295 248.0
BYD1_k127_635843_11 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000002106 234.0
BYD1_k127_635843_12 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000004836 182.0
BYD1_k127_635843_13 Biopolymer transport protein K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000006991 154.0
BYD1_k127_635843_14 Acyl-CoA thioesterase K07107 - - 0.00000000000000000000000000000000000001868 148.0
BYD1_k127_635843_15 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000009358 149.0
BYD1_k127_635843_16 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000008887 140.0
BYD1_k127_635843_17 Invasion gene expression up-regulator, SirB - - - 0.0000000000000000000000000000000003299 136.0
BYD1_k127_635843_18 TonB C terminal K03646 - - 0.0000000000000000006787 100.0
BYD1_k127_635843_19 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.0000000000000001024 80.0
BYD1_k127_635843_2 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 632.0
BYD1_k127_635843_20 peptidase activity, acting on L-amino acid peptides K01187,K01448,K07752 - 3.2.1.20,3.4.17.22,3.5.1.28 0.0000005856 61.0
BYD1_k127_635843_3 E3 component of 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 569.0
BYD1_k127_635843_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 496.0
BYD1_k127_635843_5 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 478.0
BYD1_k127_635843_6 Involved in the TonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 428.0
BYD1_k127_635843_7 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 373.0
BYD1_k127_635843_8 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 319.0
BYD1_k127_635843_9 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 312.0
BYD1_k127_6426282_0 Belongs to the GcvT family K00315,K19191 - 1.5.3.19,1.5.8.4 0.0 1371.0
BYD1_k127_6426282_1 Glycine cleavage T-protein C-terminal barrel domain K00302 - 1.5.3.1 0.0 1251.0
BYD1_k127_6426282_10 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 6.759e-245 763.0
BYD1_k127_6426282_100 Sulfurtransferase - - - 0.00000000000000000000000008977 111.0
BYD1_k127_6426282_101 long-chain fatty acid transport protein - - - 0.00000000000000000000000009078 118.0
BYD1_k127_6426282_102 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.0000000000000000000002997 101.0
BYD1_k127_6426282_103 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.00000000000000000003638 92.0
BYD1_k127_6426282_104 TIGRFAM HAD-superfamily hydrolase subfamily IA, variant 3 K19270 - 3.1.3.23 0.0000000000000000001815 101.0
BYD1_k127_6426282_105 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000001795 71.0
BYD1_k127_6426282_106 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000005994 69.0
BYD1_k127_6426282_107 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000001934 68.0
BYD1_k127_6426282_108 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.0000000001445 65.0
BYD1_k127_6426282_109 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000001455 62.0
BYD1_k127_6426282_11 transporter - - - 9.492e-239 756.0
BYD1_k127_6426282_110 Domain of unknown function (DUF4124) - - - 0.000000001916 66.0
BYD1_k127_6426282_111 Polyketide cyclase / dehydrase and lipid transport - - - 0.0003329 49.0
BYD1_k127_6426282_12 Receptor - - - 1.101e-227 732.0
BYD1_k127_6426282_13 Aldehyde dehydrogenase family K00294 - 1.2.1.88 4.647e-227 719.0
BYD1_k127_6426282_14 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 1.427e-223 699.0
BYD1_k127_6426282_15 Angiotensin-converting enzyme K01283 - 3.4.15.1 1.729e-218 716.0
BYD1_k127_6426282_16 FAD dependent oxidoreductase K00303 - 1.5.3.1 5.21e-215 702.0
BYD1_k127_6426282_17 COG0457 FOG TPR repeat - - - 4.583e-214 700.0
BYD1_k127_6426282_18 Major Facilitator Superfamily K02445,K07783 - - 7.007e-206 661.0
BYD1_k127_6426282_19 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K15372 - 2.6.1.55 9.913e-205 644.0
BYD1_k127_6426282_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1070.0
BYD1_k127_6426282_20 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 6.241e-198 648.0
BYD1_k127_6426282_21 COG3104 Dipeptide tripeptide permease K03305 - - 3.233e-194 617.0
BYD1_k127_6426282_22 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 615.0
BYD1_k127_6426282_23 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 617.0
BYD1_k127_6426282_24 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 601.0
BYD1_k127_6426282_25 belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 601.0
BYD1_k127_6426282_26 Nucleoside K03289,K11537 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 565.0
BYD1_k127_6426282_27 ABC-type proline glycine betaine transport systems periplasmic components K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007338 573.0
BYD1_k127_6426282_28 response regulator K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 538.0
BYD1_k127_6426282_29 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009663 532.0
BYD1_k127_6426282_3 WD40-like Beta Propeller Repeat - - - 3.075e-320 1022.0
BYD1_k127_6426282_30 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 508.0
BYD1_k127_6426282_31 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 527.0
BYD1_k127_6426282_32 Peptidase family S58 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002929 499.0
BYD1_k127_6426282_33 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 485.0
BYD1_k127_6426282_34 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 477.0
BYD1_k127_6426282_35 Vitamin B12 dependent methionine synthase activation K00548,K15023 - 2.1.1.13,2.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 475.0
BYD1_k127_6426282_36 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 467.0
BYD1_k127_6426282_37 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007149 487.0
BYD1_k127_6426282_38 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 452.0
BYD1_k127_6426282_39 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 469.0
BYD1_k127_6426282_4 Domain of unknown function (DUF4445) - - - 2.388e-307 955.0
BYD1_k127_6426282_40 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009076 456.0
BYD1_k127_6426282_41 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 451.0
BYD1_k127_6426282_42 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000544 449.0
BYD1_k127_6426282_43 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 452.0
BYD1_k127_6426282_44 Mediates influx of magnesium ions K03284,K16074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 426.0
BYD1_k127_6426282_45 Peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 433.0
BYD1_k127_6426282_46 PFAM helix-turn-helix- domain containing protein, AraC type K21826 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 412.0
BYD1_k127_6426282_47 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 408.0
BYD1_k127_6426282_48 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004042 402.0
BYD1_k127_6426282_49 ATPase activity K02045 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 395.0
BYD1_k127_6426282_5 TonB dependent receptor K02014 - - 5.458e-293 918.0
BYD1_k127_6426282_50 ABC-type proline glycine betaine transport system, ATPase component K02000 GO:0000166,GO:0003674,GO:0004888,GO:0005034,GO:0005215,GO:0005275,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0009628,GO:0009987,GO:0015695,GO:0015696,GO:0015697,GO:0015837,GO:0015838,GO:0016020,GO:0016021,GO:0017076,GO:0022857,GO:0023052,GO:0030554,GO:0031224,GO:0031460,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0038023,GO:0043167,GO:0043168,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0060089,GO:0065007,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004569 414.0
BYD1_k127_6426282_51 cobalamin binding K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000297 375.0
BYD1_k127_6426282_52 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 374.0
BYD1_k127_6426282_53 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007769 359.0
BYD1_k127_6426282_54 ABC transporter K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 370.0
BYD1_k127_6426282_55 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009606 363.0
BYD1_k127_6426282_56 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003845 349.0
BYD1_k127_6426282_57 PFAM Phosphate-selective porin O K07221 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004643 351.0
BYD1_k127_6426282_58 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005621 346.0
BYD1_k127_6426282_59 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 345.0
BYD1_k127_6426282_6 GMC oxidoreductase K00108 - 1.1.99.1 4.401e-280 869.0
BYD1_k127_6426282_60 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 339.0
BYD1_k127_6426282_61 signal transduction histidine kinase K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 323.0
BYD1_k127_6426282_62 Putative diguanylate phosphodiesterase K03320,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 337.0
BYD1_k127_6426282_63 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 310.0
BYD1_k127_6426282_64 Binding-protein-dependent transport system inner membrane component K02046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 317.0
BYD1_k127_6426282_65 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 301.0
BYD1_k127_6426282_66 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 296.0
BYD1_k127_6426282_67 PFAM MscS Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004571 288.0
BYD1_k127_6426282_68 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007402 284.0
BYD1_k127_6426282_69 regulation of DNA-templated transcription, elongation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003205 301.0
BYD1_k127_6426282_7 trimethylamine methyltransferase K14083 - 2.1.1.250 1.73e-274 854.0
BYD1_k127_6426282_70 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004438 256.0
BYD1_k127_6426282_71 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005394 259.0
BYD1_k127_6426282_72 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001435 262.0
BYD1_k127_6426282_73 Protein of unknown function (DUF1638) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002284 252.0
BYD1_k127_6426282_74 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001338 263.0
BYD1_k127_6426282_75 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000002744 254.0
BYD1_k127_6426282_76 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000003112 265.0
BYD1_k127_6426282_77 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000001148 247.0
BYD1_k127_6426282_78 Belongs to the bacterial glucokinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000005978 235.0
BYD1_k127_6426282_79 PepSY-associated TM region - - - 0.000000000000000000000000000000000000000000000000000000000000000315 227.0
BYD1_k127_6426282_8 Prolyl oligopeptidase family - - - 4.41e-271 872.0
BYD1_k127_6426282_80 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000001293 228.0
BYD1_k127_6426282_81 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000000000003081 207.0
BYD1_k127_6426282_82 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000001952 204.0
BYD1_k127_6426282_83 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000203 203.0
BYD1_k127_6426282_84 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000006603 202.0
BYD1_k127_6426282_85 Protein of unknown function (DUF3313) - - - 0.0000000000000000000000000000000000000000000000002989 193.0
BYD1_k127_6426282_86 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000005222 174.0
BYD1_k127_6426282_87 Transcriptional regulator K03566 - - 0.000000000000000000000000000000000000000001194 167.0
BYD1_k127_6426282_88 transporter - - - 0.000000000000000000000000000000000000000002478 173.0
BYD1_k127_6426282_89 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000009435 169.0
BYD1_k127_6426282_9 Glycosyl hydrolases family 15 - - - 1.111e-249 788.0
BYD1_k127_6426282_90 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.0000000000000000000000000000000000000001476 158.0
BYD1_k127_6426282_91 - - - - 0.0000000000000000000000000000000000000004434 155.0
BYD1_k127_6426282_92 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072321 - 0.000000000000000000000000000000000006956 144.0
BYD1_k127_6426282_93 Sarcosine oxidase delta subunit K00304 - 1.5.3.1 0.00000000000000000000000000000000001283 152.0
BYD1_k127_6426282_94 inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000001542 155.0
BYD1_k127_6426282_95 diguanylate cyclase - - - 0.00000000000000000000000000000000003197 154.0
BYD1_k127_6426282_96 Virulence factor - - - 0.0000000000000000000000000000001441 135.0
BYD1_k127_6426282_97 OmpA-like transmembrane domain - - - 0.00000000000000000000000003525 125.0
BYD1_k127_6426282_98 YMGG-like Gly-zipper - - - 0.00000000000000000000000003651 115.0
BYD1_k127_6426282_99 PFAM Membrane protein of K08972 - - 0.00000000000000000000000008977 111.0
BYD1_k127_6432462_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1133.0
BYD1_k127_6432462_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 436.0
BYD1_k127_6432462_10 DDE domain - - - 0.0000000000000002453 83.0
BYD1_k127_6432462_11 - - - - 0.0000000000002068 84.0
BYD1_k127_6432462_12 D-aminopeptidase K16203 - - 0.00000000003963 70.0
BYD1_k127_6432462_13 Recombinase zinc beta ribbon domain - - - 0.00001479 50.0
BYD1_k127_6432462_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 405.0
BYD1_k127_6432462_3 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 330.0
BYD1_k127_6432462_4 helix_turn_helix ASNC type K05800 - - 0.000000000000000000000000000000000000000000000000001701 186.0
BYD1_k127_6432462_5 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000005207 164.0
BYD1_k127_6432462_6 glutamyl-tRNA(Gln) amidotransferase subunit A K01426 - 3.5.1.4 0.000000000000000000000000000003179 125.0
BYD1_k127_6432462_7 gag-polyprotein putative aspartyl protease - - - 0.0000000000000000000000000001657 133.0
BYD1_k127_6432462_8 Modulates RecA activity K03565 - - 0.0000000000000000000000004039 110.0
BYD1_k127_6432462_9 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005979,GO:0006109,GO:0006139,GO:0006417,GO:0006446,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010675,GO:0010677,GO:0010906,GO:0010962,GO:0016070,GO:0016071,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032881,GO:0032885,GO:0034248,GO:0034249,GO:0034641,GO:0043170,GO:0043255,GO:0043467,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0045719,GO:0045912,GO:0045947,GO:0046483,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0062012,GO:0065007,GO:0070873,GO:0070874,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:2000112,GO:2000113 - 0.0000000000000000000002517 99.0
BYD1_k127_6480899_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1116.0
BYD1_k127_6480899_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 539.0
BYD1_k127_6480899_2 - - - - 0.000006587 48.0
BYD1_k127_6509762_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1432.0
BYD1_k127_6509762_1 Splits dipeptides with a prolyl residue in the C- terminal position K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 494.0
BYD1_k127_6509762_10 COG0203 Ribosomal protein L17 K02879 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000004003 161.0
BYD1_k127_6509762_11 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000004802 159.0
BYD1_k127_6509762_12 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000008337 106.0
BYD1_k127_6509762_13 -acetyltransferase - - - 0.000000000000000004747 91.0
BYD1_k127_6509762_14 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000002485 68.0
BYD1_k127_6509762_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 473.0
BYD1_k127_6509762_3 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 490.0
BYD1_k127_6509762_4 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 314.0
BYD1_k127_6509762_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 294.0
BYD1_k127_6509762_6 Major facilitator superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006505 289.0
BYD1_k127_6509762_7 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002349 216.0
BYD1_k127_6509762_8 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000003288 189.0
BYD1_k127_6509762_9 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000002531 179.0
BYD1_k127_6531832_0 Protein of unknown function (DUF1585) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007714 604.0
BYD1_k127_6531832_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 603.0
BYD1_k127_6531832_10 lactoylglutathione lyase activity - - - 0.0000000000000000000038 108.0
BYD1_k127_6531832_11 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000001764 77.0
BYD1_k127_6531832_12 Cytochrome C' - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000009041 74.0
BYD1_k127_6531832_13 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.000007423 55.0
BYD1_k127_6531832_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 489.0
BYD1_k127_6531832_3 Protein conserved in bacteria K11891,K11902,K11910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006556 412.0
BYD1_k127_6531832_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586,K12526 - 2.7.2.4,4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 387.0
BYD1_k127_6531832_5 Peptidase dimerisation domain K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 352.0
BYD1_k127_6531832_6 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008701 342.0
BYD1_k127_6531832_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007936 314.0
BYD1_k127_6531832_8 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000003052 209.0
BYD1_k127_6531832_9 transglycosylase associated protein - - - 0.0000000000000000000000000000006979 124.0
BYD1_k127_6540843_0 Subtilase family K17734 - - 2.483e-205 656.0
BYD1_k127_6551397_0 Outer membrane receptor - - - 2.573e-275 884.0
BYD1_k127_6551397_1 X-Pro dipeptidyl-peptidase (S15 family) - - - 2.736e-248 782.0
BYD1_k127_6551397_10 Periplasmic solute binding protein K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008044 339.0
BYD1_k127_6551397_11 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003191 289.0
BYD1_k127_6551397_12 ABC 3 transport family K02075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000312 284.0
BYD1_k127_6551397_13 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000003556 265.0
BYD1_k127_6551397_14 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002839 253.0
BYD1_k127_6551397_15 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000001096 263.0
BYD1_k127_6551397_16 Glycosyl transferase, family 2 K13693 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006011,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009225,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0034641,GO:0040007,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046983,GO:0055086,GO:0071704,GO:1901135,GO:1901360 2.4.1.266 0.0000000000000000000000000000000000000000001162 168.0
BYD1_k127_6551397_17 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000004703 166.0
BYD1_k127_6551397_18 glyoxalase III activity - - - 0.000000000000000000000000000000000993 142.0
BYD1_k127_6551397_19 - - - - 0.0000000000000000000000000000003397 129.0
BYD1_k127_6551397_2 Belongs to the GMC oxidoreductase family - - - 1.635e-206 655.0
BYD1_k127_6551397_20 PFAM Lipid A Biosynthesis N-terminal - - - 0.00000000000000000000000000007991 118.0
BYD1_k127_6551397_21 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000000000000007501 124.0
BYD1_k127_6551397_22 - - - - 0.000000000000000000006076 98.0
BYD1_k127_6551397_24 Belongs to the peptidase S8 family K14645 GO:0005575,GO:0005576 - 0.000000000000000001396 101.0
BYD1_k127_6551397_25 Receptor - - - 0.00000000000001478 80.0
BYD1_k127_6551397_3 Protein of unknown function (DUF1343) - - - 4.324e-206 652.0
BYD1_k127_6551397_4 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 572.0
BYD1_k127_6551397_5 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 533.0
BYD1_k127_6551397_6 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 439.0
BYD1_k127_6551397_7 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 437.0
BYD1_k127_6551397_8 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 389.0
BYD1_k127_6551397_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 364.0
BYD1_k127_7099302_0 RESPONSE REGULATOR receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 567.0
BYD1_k127_7099302_1 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 451.0
BYD1_k127_7099302_2 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 380.0
BYD1_k127_7099302_3 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008215 268.0
BYD1_k127_7099302_4 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000001185 253.0
BYD1_k127_7099302_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003811 241.0
BYD1_k127_7099302_6 glyoxalase III activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000006006 230.0
BYD1_k127_7099302_7 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000001889 222.0
BYD1_k127_7099302_8 COG1233 Phytoene dehydrogenase and related proteins - - - 0.00000000000000000000002277 104.0
BYD1_k127_7118210_0 TonB dependent receptor K02014 - - 2.732e-294 929.0
BYD1_k127_7118210_1 small GTP-binding protein K02355 - - 7.456e-294 915.0
BYD1_k127_7118210_10 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 490.0
BYD1_k127_7118210_11 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004753 479.0
BYD1_k127_7118210_12 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 468.0
BYD1_k127_7118210_13 COG2133 Glucose sorbosone dehydrogenases K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 451.0
BYD1_k127_7118210_14 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 419.0
BYD1_k127_7118210_15 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 410.0
BYD1_k127_7118210_16 Sulfotransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 419.0
BYD1_k127_7118210_17 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 391.0
BYD1_k127_7118210_18 efflux protein, MATE family K03327 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 408.0
BYD1_k127_7118210_19 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 386.0
BYD1_k127_7118210_2 Predicted membrane protein (DUF2339) - - - 6.312e-241 771.0
BYD1_k127_7118210_20 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004288 383.0
BYD1_k127_7118210_21 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 377.0
BYD1_k127_7118210_22 Sigma factor regulator FecR K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 364.0
BYD1_k127_7118210_23 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 357.0
BYD1_k127_7118210_24 UTRA K03710 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 343.0
BYD1_k127_7118210_25 dipeptidase activity K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 338.0
BYD1_k127_7118210_26 Acyl-CoA thioesterase K10805 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 325.0
BYD1_k127_7118210_27 Involved in the tonB-independent uptake of proteins K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 346.0
BYD1_k127_7118210_28 Histidine kinase K08082 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 320.0
BYD1_k127_7118210_29 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 307.0
BYD1_k127_7118210_3 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 1.524e-229 735.0
BYD1_k127_7118210_30 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 289.0
BYD1_k127_7118210_31 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000000000000000000003337 262.0
BYD1_k127_7118210_32 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000006489 261.0
BYD1_k127_7118210_33 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000006841 236.0
BYD1_k127_7118210_34 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000141 232.0
BYD1_k127_7118210_35 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000009997 199.0
BYD1_k127_7118210_36 Domain of unknown function (DUF4382) - - - 0.00000000000000000000000000000000000000000000000000003582 201.0
BYD1_k127_7118210_37 Phosphatidylethanolamine-binding protein K06910 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000004816 195.0
BYD1_k127_7118210_38 MoaE protein K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000003368 193.0
BYD1_k127_7118210_39 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000000000000000000003669 181.0
BYD1_k127_7118210_4 PTS system, glucose subfamily, IIA K11189 - - 2.001e-209 681.0
BYD1_k127_7118210_40 XdhC and CoxI family - - - 0.0000000000000000000000000000000000000000000000004189 200.0
BYD1_k127_7118210_41 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000003905 121.0
BYD1_k127_7118210_42 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000001198 118.0
BYD1_k127_7118210_43 pterin-4-alpha-carbinolamine dehydratase - - - 0.000000000000001362 91.0
BYD1_k127_7118210_44 - - - - 0.000000000001043 74.0
BYD1_k127_7118210_45 Transcriptional regulator - - - 0.0000002499 53.0
BYD1_k127_7118210_46 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.0000002909 62.0
BYD1_k127_7118210_48 lactoylglutathione lyase activity - - - 0.0005528 49.0
BYD1_k127_7118210_5 PTS system, N-acetylglucosamine-specific K02803,K02804 - 2.7.1.193 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 616.0
BYD1_k127_7118210_6 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 544.0
BYD1_k127_7118210_7 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 517.0
BYD1_k127_7118210_8 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 520.0
BYD1_k127_7118210_9 COG0277 FAD FMN-containing dehydrogenases K00102 - 1.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 488.0
BYD1_k127_7215945_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 3.337e-236 760.0
BYD1_k127_7215945_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 450.0
BYD1_k127_7215945_10 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000204 203.0
BYD1_k127_7215945_11 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000006919 128.0
BYD1_k127_7215945_12 Domain of unknown function (DUF4440) - - - 0.000000006321 63.0
BYD1_k127_7215945_13 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006015,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042301,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.000001856 54.0
BYD1_k127_7215945_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 378.0
BYD1_k127_7215945_3 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002907 308.0
BYD1_k127_7215945_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002671 268.0
BYD1_k127_7215945_5 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008955,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0030203,GO:0034645,GO:0042546,GO:0043164,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000006741 242.0
BYD1_k127_7215945_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000002162 245.0
BYD1_k127_7215945_7 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000004379 227.0
BYD1_k127_7215945_8 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000139 203.0
BYD1_k127_7215945_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000003724 214.0
BYD1_k127_7232784_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 597.0
BYD1_k127_7232784_1 Phospholipase D. Active site motifs. K06132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 501.0
BYD1_k127_7232784_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000006146 115.0
BYD1_k127_7232784_11 Fibronectin type 3 domain - - - 0.00000007936 64.0
BYD1_k127_7232784_2 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 482.0
BYD1_k127_7232784_3 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 457.0
BYD1_k127_7232784_4 GTP-binding protein TypA K06207 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 301.0
BYD1_k127_7232784_5 COG NOG10142 non supervised orthologous group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 303.0
BYD1_k127_7232784_6 Protein involved in meta-pathway of phenol degradation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001652 284.0
BYD1_k127_7232784_7 Beta-L-arabinofuranosidase, GH127 - - - 0.000000000000000000000000000000000000000000000000153 190.0
BYD1_k127_7232784_9 - - - - 0.0000000000000000000000000000000000001084 147.0
BYD1_k127_7336501_0 Flavin containing amine oxidoreductase - - - 4.562e-220 702.0
BYD1_k127_7336501_1 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009483 492.0
BYD1_k127_7338459_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1080.0
BYD1_k127_7338459_1 AAA-like domain - - - 1.913e-239 797.0
BYD1_k127_7338459_10 Protein of unknown function (DUF808) K09781 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 421.0
BYD1_k127_7338459_11 Platelet-activating factor acetylhydrolase, isoform II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 374.0
BYD1_k127_7338459_12 Lecithin:cholesterol acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 372.0
BYD1_k127_7338459_13 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 367.0
BYD1_k127_7338459_14 Zn-dependent hydrolases including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 372.0
BYD1_k127_7338459_15 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 344.0
BYD1_k127_7338459_16 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006768 328.0
BYD1_k127_7338459_17 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 319.0
BYD1_k127_7338459_18 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 332.0
BYD1_k127_7338459_19 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001827 284.0
BYD1_k127_7338459_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 4.053e-203 647.0
BYD1_k127_7338459_20 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001128 267.0
BYD1_k127_7338459_21 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000144 266.0
BYD1_k127_7338459_22 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000006589 267.0
BYD1_k127_7338459_23 Biotin-lipoyl like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002197 259.0
BYD1_k127_7338459_24 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000001069 258.0
BYD1_k127_7338459_25 PFAM Appr-1-p processing domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000593 237.0
BYD1_k127_7338459_26 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002545 233.0
BYD1_k127_7338459_27 - - - - 0.000000000000000000000000000000000000000000000000000000000003542 223.0
BYD1_k127_7338459_28 Belongs to the helicase family. UvrD subfamily K10742 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000007774 215.0
BYD1_k127_7338459_29 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000324 225.0
BYD1_k127_7338459_3 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.331e-194 624.0
BYD1_k127_7338459_30 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000001065 206.0
BYD1_k127_7338459_31 Thioesterase - - - 0.000000000000000000000000000000000000000000000000000000454 209.0
BYD1_k127_7338459_32 Methyl-transferase - - - 0.000000000000000000000000000000000000000000000000003035 191.0
BYD1_k127_7338459_33 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000001447 196.0
BYD1_k127_7338459_34 Thioesterase-like superfamily - - - 0.0000000000000000000000000000000000000000000000005345 185.0
BYD1_k127_7338459_35 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000004291 169.0
BYD1_k127_7338459_36 - - - - 0.000000000000000000000000000000000000000000001822 181.0
BYD1_k127_7338459_37 WHG domain - - - 0.0000000000000000000000000000000000000000004296 165.0
BYD1_k127_7338459_38 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000008747 154.0
BYD1_k127_7338459_39 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000001562 153.0
BYD1_k127_7338459_4 protein conserved in bacteria - - - 8.772e-194 625.0
BYD1_k127_7338459_40 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000000008614 137.0
BYD1_k127_7338459_41 Universal stress protein family - - - 0.00000000000000000000000000000001819 143.0
BYD1_k127_7338459_42 serine threonine protein kinase - - - 0.00000000000000000000000000000119 140.0
BYD1_k127_7338459_43 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000001347 129.0
BYD1_k127_7338459_44 Peptidase_C39 like family - - - 0.00000000000000000000000009171 113.0
BYD1_k127_7338459_45 Sterol-binding protein K03690 - - 0.00000000000000000001244 100.0
BYD1_k127_7338459_46 - - - - 0.0000000000007173 75.0
BYD1_k127_7338459_47 - - - - 0.00000002623 64.0
BYD1_k127_7338459_5 Poly-beta-hydroxybutyrate polymerase K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 620.0
BYD1_k127_7338459_6 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 626.0
BYD1_k127_7338459_7 MBOAT, membrane-bound O-acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 596.0
BYD1_k127_7338459_8 Peptidase dimerisation domain K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 594.0
BYD1_k127_7338459_9 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008111 517.0
BYD1_k127_7350073_0 TonB dependent receptor - - - 5.254e-316 996.0
BYD1_k127_7350073_1 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 3.188e-301 958.0
BYD1_k127_7350073_10 Chromosomal replication initiator, DnaA K07491 - - 0.00000000000000000000000000000000000000000000000000000727 200.0
BYD1_k127_7350073_11 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000003636 188.0
BYD1_k127_7350073_12 phosphorelay signal transduction system K02477 - - 0.00000000000000000000000000000000000000000000001837 184.0
BYD1_k127_7350073_13 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000004616 155.0
BYD1_k127_7350073_14 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000004667 168.0
BYD1_k127_7350073_15 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000002811 153.0
BYD1_k127_7350073_16 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000001183 125.0
BYD1_k127_7350073_17 Among the AAA ATPases, the YifB protease family belongs to the Helix 2 insert clade K07391 - - 0.00000000000000000000000000001665 123.0
BYD1_k127_7350073_18 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000009499 111.0
BYD1_k127_7350073_19 sequence-specific DNA binding - - - 0.00000000000000000001417 102.0
BYD1_k127_7350073_2 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000811 500.0
BYD1_k127_7350073_21 - - - - 0.0005076 46.0
BYD1_k127_7350073_3 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008124 486.0
BYD1_k127_7350073_4 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 455.0
BYD1_k127_7350073_5 serine protease protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 451.0
BYD1_k127_7350073_6 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 286.0
BYD1_k127_7350073_7 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003828 281.0
BYD1_k127_7350073_8 Bacterial transcriptional repressor C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003374 275.0
BYD1_k127_7350073_9 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000125 216.0
BYD1_k127_7366598_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 0.0 1053.0
BYD1_k127_7366598_1 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 522.0
BYD1_k127_7366598_10 Protein of unknown function (DUF1566) - - - 0.0000000000000001907 87.0
BYD1_k127_7366598_11 Protein of unknown function (DUF1566) - - - 0.0000000000004274 76.0
BYD1_k127_7366598_12 protein secretion - - - 0.000008512 58.0
BYD1_k127_7366598_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 442.0
BYD1_k127_7366598_3 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000007471 251.0
BYD1_k127_7366598_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000007368 240.0
BYD1_k127_7366598_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000002144 151.0
BYD1_k127_7366598_6 E-Z type HEAT repeats - - - 0.000000000000000000000000000000001338 144.0
BYD1_k127_7366598_7 - - - - 0.0000000000000000000000000000267 138.0
BYD1_k127_7366598_8 pyrroloquinoline quinone binding - - - 0.00000000000000000000000001669 115.0
BYD1_k127_7366598_9 Protein of unknown function (DUF1566) - - - 0.00000000000000000359 92.0
BYD1_k127_763429_0 Zinc metalloprotease (Elastase) K01400 - 3.4.24.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 542.0
BYD1_k127_763429_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009671 278.0
BYD1_k127_763429_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000008937 230.0
BYD1_k127_763429_3 Proprotein convertase P-domain - - - 0.0000000000000005478 94.0
BYD1_k127_7688220_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1180.0
BYD1_k127_7688220_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 2.226e-286 889.0
BYD1_k127_7688220_10 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005371 375.0
BYD1_k127_7688220_11 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 360.0
BYD1_k127_7688220_12 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 322.0
BYD1_k127_7688220_13 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009206 322.0
BYD1_k127_7688220_14 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 303.0
BYD1_k127_7688220_15 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 306.0
BYD1_k127_7688220_16 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 308.0
BYD1_k127_7688220_17 L,D-transpeptidase catalytic domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 310.0
BYD1_k127_7688220_18 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 302.0
BYD1_k127_7688220_19 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009914 270.0
BYD1_k127_7688220_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 2.229e-212 685.0
BYD1_k127_7688220_20 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000003375 264.0
BYD1_k127_7688220_21 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001083 270.0
BYD1_k127_7688220_22 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002284 251.0
BYD1_k127_7688220_23 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000005744 255.0
BYD1_k127_7688220_24 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000008817 238.0
BYD1_k127_7688220_25 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000005975 235.0
BYD1_k127_7688220_26 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000458 241.0
BYD1_k127_7688220_27 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000003399 202.0
BYD1_k127_7688220_28 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000000000000000001473 187.0
BYD1_k127_7688220_29 Negative regulator of sigma E activity K03598 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 - 0.0000000000000000000000000000000000000000000001561 186.0
BYD1_k127_7688220_3 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 3.965e-199 628.0
BYD1_k127_7688220_30 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000001827 190.0
BYD1_k127_7688220_31 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000005007 170.0
BYD1_k127_7688220_32 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000794 117.0
BYD1_k127_7688220_33 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000005079 96.0
BYD1_k127_7688220_34 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 GO:0003674,GO:0003824,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0016740,GO:0016772,GO:0016780,GO:0044238,GO:0071704,GO:1901576 2.7.8.7 0.000000000000000000002829 106.0
BYD1_k127_7688220_35 Belongs to the UPF0434 family K09791 - - 0.000000000000000002757 88.0
BYD1_k127_7688220_36 Flavinator of succinate dehydrogenase K09159 - - 0.0000000000000001861 84.0
BYD1_k127_7688220_37 - - - - 0.0000000000000006805 82.0
BYD1_k127_7688220_38 Uncharacterized ACR, COG1399 K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000421 86.0
BYD1_k127_7688220_39 Sigma factor algU negative regulatory protein K03597 - - 0.000000002808 69.0
BYD1_k127_7688220_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 593.0
BYD1_k127_7688220_40 PFAM glutaredoxin 2 - - - 0.000000005532 59.0
BYD1_k127_7688220_41 Alanine-zipper, major outer membrane lipoprotein - - - 0.00001129 53.0
BYD1_k127_7688220_42 Domain of unknown function (DUF4845) - - - 0.00005907 53.0
BYD1_k127_7688220_5 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 463.0
BYD1_k127_7688220_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 445.0
BYD1_k127_7688220_7 aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006773 440.0
BYD1_k127_7688220_8 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 416.0
BYD1_k127_7688220_9 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 370.0
BYD1_k127_7901423_0 Aspartyl/Asparaginyl beta-hydroxylase K00476,K12979 - 1.14.11.16 0.0000000000000000000000000000000000000000000000000005278 187.0
BYD1_k127_7901423_1 TIGRFAM outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000000000000000005574 178.0
BYD1_k127_7901423_2 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000002918 163.0
BYD1_k127_7901423_3 - - - - 0.000000000000000002013 99.0
BYD1_k127_7901423_4 - - - - 0.00001332 55.0
BYD1_k127_7965842_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1527.0
BYD1_k127_7965842_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1178.0
BYD1_k127_7965842_10 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 9.642e-206 646.0
BYD1_k127_7965842_11 Cysteine-rich domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 598.0
BYD1_k127_7965842_12 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 572.0
BYD1_k127_7965842_13 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007217 563.0
BYD1_k127_7965842_14 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 545.0
BYD1_k127_7965842_15 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 538.0
BYD1_k127_7965842_16 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 532.0
BYD1_k127_7965842_17 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008863 526.0
BYD1_k127_7965842_18 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 522.0
BYD1_k127_7965842_19 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 509.0
BYD1_k127_7965842_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1.251e-319 1025.0
BYD1_k127_7965842_20 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003081 499.0
BYD1_k127_7965842_21 signal peptide peptidase K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 485.0
BYD1_k127_7965842_22 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 461.0
BYD1_k127_7965842_23 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 462.0
BYD1_k127_7965842_24 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 464.0
BYD1_k127_7965842_25 Protein of unknown function (DUF1298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005475 445.0
BYD1_k127_7965842_26 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 436.0
BYD1_k127_7965842_27 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 444.0
BYD1_k127_7965842_28 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 441.0
BYD1_k127_7965842_29 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 400.0
BYD1_k127_7965842_3 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 4.607e-294 918.0
BYD1_k127_7965842_30 Including yeast histone deacetylase and acetoin utilization protein K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 400.0
BYD1_k127_7965842_31 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005376 400.0
BYD1_k127_7965842_32 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 394.0
BYD1_k127_7965842_33 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 368.0
BYD1_k127_7965842_34 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008969 361.0
BYD1_k127_7965842_35 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 346.0
BYD1_k127_7965842_36 PFAM ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 344.0
BYD1_k127_7965842_37 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 351.0
BYD1_k127_7965842_38 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 349.0
BYD1_k127_7965842_39 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 335.0
BYD1_k127_7965842_4 ABC transporter - - - 1.426e-285 886.0
BYD1_k127_7965842_40 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 327.0
BYD1_k127_7965842_41 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 309.0
BYD1_k127_7965842_42 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 292.0
BYD1_k127_7965842_43 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003147 284.0
BYD1_k127_7965842_44 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008263 279.0
BYD1_k127_7965842_45 phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006661 289.0
BYD1_k127_7965842_46 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000271 282.0
BYD1_k127_7965842_47 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004833 297.0
BYD1_k127_7965842_48 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000001015 267.0
BYD1_k127_7965842_49 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001919 260.0
BYD1_k127_7965842_5 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - 3.634e-267 837.0
BYD1_k127_7965842_50 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000692 264.0
BYD1_k127_7965842_51 FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001443 263.0
BYD1_k127_7965842_52 COG1428 Deoxynucleoside kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000267 258.0
BYD1_k127_7965842_53 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006353 264.0
BYD1_k127_7965842_54 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784 - 4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000001052 259.0
BYD1_k127_7965842_55 assembly protein SufD K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000001291 252.0
BYD1_k127_7965842_56 (FHA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000002146 222.0
BYD1_k127_7965842_57 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000003709 222.0
BYD1_k127_7965842_58 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000122 215.0
BYD1_k127_7965842_59 CBS domain - - - 0.00000000000000000000000000000000000000000000000000000000001076 223.0
BYD1_k127_7965842_6 TIGRFAM FeS assembly protein SufB K09014 - - 4.253e-267 828.0
BYD1_k127_7965842_60 PFAM Amino acid-binding ACT K03567 - - 0.00000000000000000000000000000000000000000000000000000186 199.0
BYD1_k127_7965842_61 MlaA lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000002106 205.0
BYD1_k127_7965842_62 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000472 180.0
BYD1_k127_7965842_63 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000002274 182.0
BYD1_k127_7965842_64 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000007446 179.0
BYD1_k127_7965842_65 Riboflavin synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000001144 196.0
BYD1_k127_7965842_66 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000000000002732 168.0
BYD1_k127_7965842_67 PFAM Alkyl hydroperoxide reductase K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000003704 171.0
BYD1_k127_7965842_68 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000001035 179.0
BYD1_k127_7965842_69 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000002186 179.0
BYD1_k127_7965842_7 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 5.379e-261 817.0
BYD1_k127_7965842_70 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000008929 167.0
BYD1_k127_7965842_71 TIGRFAM SUF system FeS K04488 - - 0.0000000000000000000000000000000000000000001394 179.0
BYD1_k127_7965842_72 MlaD protein K02067 - - 0.000000000000000000000000000000000000000001211 161.0
BYD1_k127_7965842_73 Domain of unknown function (DUF1820) - - - 0.00000000000000000000000000000000000000008015 153.0
BYD1_k127_7965842_74 transport system permease component - - - 0.0000000000000000000000000000000000000001127 160.0
BYD1_k127_7965842_75 ABC-type transport system involved in resistance to organic solvents auxiliary component K07323 - - 0.0000000000000000000000000000000000000001584 161.0
BYD1_k127_7965842_76 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000005949 158.0
BYD1_k127_7965842_77 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000005545 138.0
BYD1_k127_7965842_78 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.0000000000000000000000000000001368 131.0
BYD1_k127_7965842_79 MAPEG family - - - 0.0000000000000000000000000000008376 131.0
BYD1_k127_7965842_8 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 3.684e-232 743.0
BYD1_k127_7965842_80 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000001797 129.0
BYD1_k127_7965842_81 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000003059 125.0
BYD1_k127_7965842_82 transcriptional regulator - - - 0.000000000000000000000000003158 128.0
BYD1_k127_7965842_83 Type VI secretion system FHA domain protein K11894,K11913 - - 0.000000000000000000000008893 114.0
BYD1_k127_7965842_84 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000001998 102.0
BYD1_k127_7965842_85 Poly(hydroxyalcanoate) granule associated protein - - - 0.0000000000000000007851 94.0
BYD1_k127_7965842_86 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000000000003357 87.0
BYD1_k127_7965842_87 MAPEG family - - - 0.00000000000000001736 89.0
BYD1_k127_7965842_88 - - - - 0.000000000006926 68.0
BYD1_k127_7965842_89 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.00000001977 66.0
BYD1_k127_7965842_9 SMART Nucleotide binding protein, PINc K07175 - - 7.906e-218 685.0
BYD1_k127_7965842_90 LysE type translocator - - - 0.00000007374 62.0
BYD1_k127_7965842_91 NTP binding protein (Contains STAS domain) K07122 - - 0.0000001064 58.0
BYD1_k127_7965842_93 Membrane - - - 0.00001669 57.0
BYD1_k127_7965842_94 Recombinase zinc beta ribbon domain - - - 0.0001651 44.0
BYD1_k127_7977589_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1176.0
BYD1_k127_7977589_1 modulator of DNA gyrase K03568 - - 1.29e-213 684.0
BYD1_k127_7977589_10 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 392.0
BYD1_k127_7977589_11 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 387.0
BYD1_k127_7977589_12 Glucose / Sorbosone dehydrogenase K00117,K21430 - 1.1.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 372.0
BYD1_k127_7977589_13 Carbon-nitrogen hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 320.0
BYD1_k127_7977589_14 Type II secretory pathway component ExeA K02450,K12283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 322.0
BYD1_k127_7977589_15 Protein of unknown function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003489 343.0
BYD1_k127_7977589_16 PFAM CBS domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 313.0
BYD1_k127_7977589_17 dna polymerase III delta subunit K02340 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000008641 271.0
BYD1_k127_7977589_18 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000007345 231.0
BYD1_k127_7977589_19 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000005596 198.0
BYD1_k127_7977589_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 5.562e-206 648.0
BYD1_k127_7977589_20 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000005508 190.0
BYD1_k127_7977589_21 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000001473 158.0
BYD1_k127_7977589_22 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000003349 159.0
BYD1_k127_7977589_23 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000001519 137.0
BYD1_k127_7977589_24 Belongs to the UPF0307 family K09889 - - 0.0000000000000000000009083 101.0
BYD1_k127_7977589_26 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000006675 85.0
BYD1_k127_7977589_3 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 548.0
BYD1_k127_7977589_4 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002707 522.0
BYD1_k127_7977589_5 Serine dehydratase beta chain K01752 - 4.3.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002763 530.0
BYD1_k127_7977589_6 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 487.0
BYD1_k127_7977589_7 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 423.0
BYD1_k127_7977589_8 cytochrome C peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 408.0
BYD1_k127_7977589_9 PFAM PhoH family protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 415.0
BYD1_k127_802676_0 FtsX-like permease family K02004 - - 2.223e-321 1006.0
BYD1_k127_802676_1 Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA K00219,K09461 - 1.14.13.40,1.3.1.34 1.613e-308 962.0
BYD1_k127_802676_10 Carbohydrate phosphorylase - - - 5.87e-202 655.0
BYD1_k127_802676_11 Type II secretory pathway, component HofQ K02666 - - 3.988e-194 630.0
BYD1_k127_802676_12 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 610.0
BYD1_k127_802676_13 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 606.0
BYD1_k127_802676_14 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 511.0
BYD1_k127_802676_15 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 483.0
BYD1_k127_802676_16 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 470.0
BYD1_k127_802676_17 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 465.0
BYD1_k127_802676_18 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 456.0
BYD1_k127_802676_19 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 484.0
BYD1_k127_802676_2 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033554,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 2.003e-299 939.0
BYD1_k127_802676_20 Belongs to the glycosyl hydrolase 57 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 456.0
BYD1_k127_802676_21 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 426.0
BYD1_k127_802676_22 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009978 426.0
BYD1_k127_802676_23 HlyD family secretion protein K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 430.0
BYD1_k127_802676_24 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 387.0
BYD1_k127_802676_25 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 390.0
BYD1_k127_802676_26 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004937 412.0
BYD1_k127_802676_27 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 394.0
BYD1_k127_802676_28 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 391.0
BYD1_k127_802676_29 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007196 375.0
BYD1_k127_802676_3 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.397e-265 857.0
BYD1_k127_802676_30 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 368.0
BYD1_k127_802676_31 Transcriptional regulator K13633 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000151 372.0
BYD1_k127_802676_32 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 364.0
BYD1_k127_802676_33 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005235 352.0
BYD1_k127_802676_34 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 335.0
BYD1_k127_802676_35 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 314.0
BYD1_k127_802676_36 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 340.0
BYD1_k127_802676_37 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 313.0
BYD1_k127_802676_38 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007796 302.0
BYD1_k127_802676_39 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 299.0
BYD1_k127_802676_4 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 4.561e-261 823.0
BYD1_k127_802676_40 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 288.0
BYD1_k127_802676_41 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002339 288.0
BYD1_k127_802676_42 Adenylate cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003693 304.0
BYD1_k127_802676_43 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001061 294.0
BYD1_k127_802676_44 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005727 267.0
BYD1_k127_802676_45 Major Facilitator K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006012 276.0
BYD1_k127_802676_46 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000000002362 275.0
BYD1_k127_802676_47 PFAM YicC-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007677 258.0
BYD1_k127_802676_48 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000004426 249.0
BYD1_k127_802676_49 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000003053 235.0
BYD1_k127_802676_5 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 2.088e-244 775.0
BYD1_k127_802676_50 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000003474 222.0
BYD1_k127_802676_51 MOSC domain protein beta barrel domain protein K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000006664 228.0
BYD1_k127_802676_52 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000001306 236.0
BYD1_k127_802676_53 DJ-1/PfpI family - - - 0.000000000000000000000000000000000000000000000000000000000001794 222.0
BYD1_k127_802676_54 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000003917 224.0
BYD1_k127_802676_55 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000001876 213.0
BYD1_k127_802676_56 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000000000007215 204.0
BYD1_k127_802676_57 - - - - 0.00000000000000000000000000000000000000000000000000000007101 201.0
BYD1_k127_802676_58 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000000008363 203.0
BYD1_k127_802676_59 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000002539 203.0
BYD1_k127_802676_6 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 8.163e-222 700.0
BYD1_k127_802676_60 Pilus assembly protein PilO K02664 - - 0.0000000000000000000000000000000000000000000000000009559 199.0
BYD1_k127_802676_61 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000000000000000000000000000001874 188.0
BYD1_k127_802676_62 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000312 179.0
BYD1_k127_802676_63 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000003975 182.0
BYD1_k127_802676_64 Competence protein - - - 0.00000000000000000000000000000000000000000000004562 181.0
BYD1_k127_802676_65 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000000000000000004254 188.0
BYD1_k127_802676_66 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000001771 171.0
BYD1_k127_802676_67 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000001112 161.0
BYD1_k127_802676_68 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000001712 164.0
BYD1_k127_802676_69 oxidase, assembly K02258 - - 0.00000000000000000000000000000000000000001786 162.0
BYD1_k127_802676_7 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 3.398e-217 700.0
BYD1_k127_802676_70 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000001044 169.0
BYD1_k127_802676_71 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000008382 148.0
BYD1_k127_802676_72 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000401 149.0
BYD1_k127_802676_73 pilus assembly protein pilp K02665 - - 0.00000000000000000000000000000000001999 151.0
BYD1_k127_802676_74 Belongs to the UPF0312 family K12262 - - 0.000000000000000000000000000000002314 136.0
BYD1_k127_802676_75 Tetratricopeptide repeat - - - 0.00000000000000000000000000000002035 146.0
BYD1_k127_802676_76 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000003243 122.0
BYD1_k127_802676_77 Binds the 23S rRNA K02909 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000001754 116.0
BYD1_k127_802676_78 universal stress protein K14055 GO:0000302,GO:0001539,GO:0006928,GO:0006950,GO:0006979,GO:0008150,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0033554,GO:0034599,GO:0034614,GO:0034644,GO:0035690,GO:0040011,GO:0042221,GO:0042493,GO:0042542,GO:0042710,GO:0044010,GO:0044764,GO:0046677,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071478,GO:0071482,GO:0071973,GO:0097237,GO:0097588,GO:0104004,GO:1901700,GO:1901701 - 0.00000000000000000000000002802 121.0
BYD1_k127_802676_79 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000008514 98.0
BYD1_k127_802676_8 FtsX-like permease family K02004 - - 2.993e-212 704.0
BYD1_k127_802676_80 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008813,GO:0009058,GO:0009108,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 4.1.3.40 0.0000000000000000003192 95.0
BYD1_k127_802676_81 - - - - 0.00000000000005881 76.0
BYD1_k127_802676_82 Bacterial protein of unknown function (DUF883) - - - 0.000000003273 66.0
BYD1_k127_802676_83 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0009721 46.0
BYD1_k127_802676_9 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 1.134e-202 643.0
BYD1_k127_816472_0 COG1233 Phytoene dehydrogenase and related proteins - - - 1.536e-260 811.0
BYD1_k127_816472_1 COG0457 FOG TPR repeat - - - 2.583e-224 708.0
BYD1_k127_816472_10 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 456.0
BYD1_k127_816472_11 COG1233 Phytoene dehydrogenase and related proteins K10027,K10210 - 1.14.99.44,1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 456.0
BYD1_k127_816472_12 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 389.0
BYD1_k127_816472_13 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001746 391.0
BYD1_k127_816472_14 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009339 363.0
BYD1_k127_816472_15 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000001441 268.0
BYD1_k127_816472_16 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000006669 175.0
BYD1_k127_816472_17 COG1309 Transcriptional regulator K02167 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0006950,GO:0006970,GO:0008150,GO:0009628,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0043565,GO:0044212,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000002448 157.0
BYD1_k127_816472_2 Amidohydrolase K07045 - - 3.877e-218 690.0
BYD1_k127_816472_3 belongs to the aldehyde dehydrogenase family K09472 - 1.2.1.99 3.035e-214 676.0
BYD1_k127_816472_4 Bacterial protein of unknown function (DUF885) - - - 2.828e-205 654.0
BYD1_k127_816472_5 COG1042 Acyl-CoA synthetase (NDP forming) - - - 1.37e-197 638.0
BYD1_k127_816472_6 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008588 598.0
BYD1_k127_816472_7 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 582.0
BYD1_k127_816472_8 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006053 531.0
BYD1_k127_816472_9 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 484.0
BYD1_k127_8176275_0 Protein of unknown function (DUF3604) - - - 2.054e-307 953.0
BYD1_k127_8176275_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 395.0
BYD1_k127_8176275_10 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000003328 118.0
BYD1_k127_8176275_11 - - - - 0.00000000000000000000003387 106.0
BYD1_k127_8176275_12 COG2010 Cytochrome c, mono- and diheme variants - - - 0.00000000000000004427 93.0
BYD1_k127_8176275_13 Host attachment protein - - - 0.0000000000000003626 90.0
BYD1_k127_8176275_2 Putative peptidoglycan binding domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 382.0
BYD1_k127_8176275_3 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005937 375.0
BYD1_k127_8176275_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000943 327.0
BYD1_k127_8176275_5 Regulator of chromosome condensation (RCC1) repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002537 298.0
BYD1_k127_8176275_6 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000001636 240.0
BYD1_k127_8176275_7 PPIC-type PPIASE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000147 236.0
BYD1_k127_8176275_8 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000000000000003325 196.0
BYD1_k127_8176275_9 Lipoprotein - - - 0.0000000000000000000000000000000000000000001184 168.0
BYD1_k127_8343669_0 COG1233 Phytoene dehydrogenase and related proteins - - - 1.067e-229 721.0
BYD1_k127_8343669_1 Circadian clock protein KaiC K08482 - - 1.646e-227 714.0
BYD1_k127_8343669_10 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 453.0
BYD1_k127_8343669_11 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 449.0
BYD1_k127_8343669_12 decarboxylase K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008787 395.0
BYD1_k127_8343669_13 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 396.0
BYD1_k127_8343669_14 Beta-lactamase superfamily domain K00784 - 3.1.26.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 376.0
BYD1_k127_8343669_15 TIGRFAM phenazine biosynthesis protein PhzF family K06998 - 5.3.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 338.0
BYD1_k127_8343669_16 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 319.0
BYD1_k127_8343669_17 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003938 286.0
BYD1_k127_8343669_18 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001387 249.0
BYD1_k127_8343669_2 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 4.762e-220 705.0
BYD1_k127_8343669_20 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000003577 171.0
BYD1_k127_8343669_21 SnoaL-like polyketide cyclase - - - 0.000000000000000000000000000000000000009318 158.0
BYD1_k127_8343669_22 Glutathione-dependent formaldehyde-activating enzyme family protein 4 - - - 0.000000000000000000000000000000001012 143.0
BYD1_k127_8343669_23 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.00000000000000000000000000000001501 130.0
BYD1_k127_8343669_24 - - - - 0.00000000000000000000000000113 116.0
BYD1_k127_8343669_25 cheY-homologous receiver domain - - - 0.0000000000000000000001473 102.0
BYD1_k127_8343669_27 Membrane-bound lysozyme-inhibitor of c-type lysozyme - - - 0.00000000000001284 87.0
BYD1_k127_8343669_28 Protein conserved in bacteria K09914 - - 0.000000000000017 87.0
BYD1_k127_8343669_3 Belongs to the BCCT transporter (TC 2.A.15) family K03451 - - 1.196e-198 632.0
BYD1_k127_8343669_30 Chagasin family peptidase inhibitor I42 K14475 - - 0.000000001413 66.0
BYD1_k127_8343669_4 Trimethylamine methyltransferase (MTTB) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009405 589.0
BYD1_k127_8343669_5 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 540.0
BYD1_k127_8343669_6 Carboxylesterase family K03929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 497.0
BYD1_k127_8343669_7 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 488.0
BYD1_k127_8343669_8 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 466.0
BYD1_k127_8343669_9 Phytoene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 474.0
BYD1_k127_8355284_0 Trimethylamine methyltransferase (MTTB) K14083 - 2.1.1.250 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 392.0
BYD1_k127_8355284_1 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.0000000000000000000000000000000000006182 144.0
BYD1_k127_8563179_0 - - - - 1.555e-252 797.0
BYD1_k127_8563179_1 HIT domain - - - 0.0000000000000000000000000000000000001878 148.0
BYD1_k127_8563179_2 oxidoreductase gamma subunit K00172 - 1.2.7.1 0.0000002968 53.0
BYD1_k127_8643795_0 Prolyl oligopeptidase family - - - 5.852e-202 649.0
BYD1_k127_8643795_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 447.0
BYD1_k127_8643795_10 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000001294 204.0
BYD1_k127_8643795_11 COG1309 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000001286 193.0
BYD1_k127_8643795_12 Cytochrome c - - - 0.00000000000000000000000000000000000000000007746 168.0
BYD1_k127_8643795_13 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000485 111.0
BYD1_k127_8643795_14 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000001497 115.0
BYD1_k127_8643795_2 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 384.0
BYD1_k127_8643795_3 chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 346.0
BYD1_k127_8643795_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 344.0
BYD1_k127_8643795_5 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 327.0
BYD1_k127_8643795_6 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 299.0
BYD1_k127_8643795_7 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000129 291.0
BYD1_k127_8643795_8 NADPH-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007168 244.0
BYD1_k127_8643795_9 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000000000000000000000000000000000000000000007926 222.0
BYD1_k127_8976138_0 Large extracellular alpha-helical protein K09607 - - 1.875e-282 897.0
BYD1_k127_8976138_1 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006546 414.0
BYD1_k127_8976138_10 - - - - 0.0000000002504 70.0
BYD1_k127_8976138_2 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 355.0
BYD1_k127_8976138_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 324.0
BYD1_k127_8976138_4 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000003812 201.0
BYD1_k127_8976138_5 Iron-sulphur cluster biosynthesis K15724 - - 0.00000000000000000000000000000000000000000000000003442 181.0
BYD1_k127_8976138_6 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000001526 183.0
BYD1_k127_8976138_7 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000007665 151.0
BYD1_k127_8976138_8 Binding-protein-dependent transport system inner membrane component K02011 - - 0.00000000000000000000000000001421 118.0
BYD1_k127_8976138_9 - - - - 0.0000000000001643 76.0
BYD1_k127_9078055_0 COG0146 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 3.764e-319 985.0
BYD1_k127_9078055_1 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 2.325e-277 871.0
BYD1_k127_9078055_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002056 267.0
BYD1_k127_9078055_11 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004541 253.0
BYD1_k127_9078055_12 Isochorismatase family K13995 - 3.5.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000004151 248.0
BYD1_k127_9078055_13 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000001028 245.0
BYD1_k127_9078055_14 PFAM Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000008189 213.0
BYD1_k127_9078055_15 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000002528 196.0
BYD1_k127_9078055_16 FCD - - - 0.000000000000000000000000000000000000000000000000001139 190.0
BYD1_k127_9078055_17 Protein of unknown function, DUF481 K07283 - - 0.000000000000000000000000000003082 127.0
BYD1_k127_9078055_18 BrnA antitoxin of type II toxin-antitoxin system - - - 0.000000000003659 72.0
BYD1_k127_9078055_19 Periplasmic or secreted lipoprotein - - - 0.00000000001971 76.0
BYD1_k127_9078055_2 Outer membrane receptor K02014 - - 9.349e-241 770.0
BYD1_k127_9078055_20 Helix-turn-helix XRE-family like proteins - - - 0.0000001718 64.0
BYD1_k127_9078055_3 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 2.249e-219 726.0
BYD1_k127_9078055_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 620.0
BYD1_k127_9078055_5 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 546.0
BYD1_k127_9078055_6 PFAM sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000705 486.0
BYD1_k127_9078055_7 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008587 469.0
BYD1_k127_9078055_8 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 436.0
BYD1_k127_9078055_9 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 374.0
BYD1_k127_9123687_0 COG2939 Carboxypeptidase C (cathepsin A) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 516.0
BYD1_k127_9123687_1 cell septum assembly - - - 0.000000000000000000000001228 112.0
BYD1_k127_9294519_0 peptidase K01354 - 3.4.21.83 1.546e-292 914.0
BYD1_k127_9294519_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 5.355e-289 914.0
BYD1_k127_9294519_10 PFAM FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 571.0
BYD1_k127_9294519_11 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 525.0
BYD1_k127_9294519_12 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 546.0
BYD1_k127_9294519_13 Nicotinate phosphoribosyltransferase (NAPRTase) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 524.0
BYD1_k127_9294519_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 502.0
BYD1_k127_9294519_15 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 475.0
BYD1_k127_9294519_16 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 478.0
BYD1_k127_9294519_17 Dak2 K07030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 482.0
BYD1_k127_9294519_18 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 466.0
BYD1_k127_9294519_19 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 442.0
BYD1_k127_9294519_2 acyl-CoA dehydrogenase K06445 - - 2.852e-275 869.0
BYD1_k127_9294519_20 COG0665 Glycine D-amino acid oxidases (deaminating) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 421.0
BYD1_k127_9294519_21 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003437 409.0
BYD1_k127_9294519_22 Zn_pept - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006527 411.0
BYD1_k127_9294519_23 abc transporter atp-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 379.0
BYD1_k127_9294519_24 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 358.0
BYD1_k127_9294519_25 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 347.0
BYD1_k127_9294519_26 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 349.0
BYD1_k127_9294519_27 Protein of unknown function (DUF1282) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 342.0
BYD1_k127_9294519_28 polyphosphate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000538 334.0
BYD1_k127_9294519_29 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 324.0
BYD1_k127_9294519_3 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.448e-266 831.0
BYD1_k127_9294519_30 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 306.0
BYD1_k127_9294519_31 Putative prokaryotic signal transducing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007776 296.0
BYD1_k127_9294519_32 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 299.0
BYD1_k127_9294519_33 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 310.0
BYD1_k127_9294519_34 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K14161 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 312.0
BYD1_k127_9294519_35 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 289.0
BYD1_k127_9294519_36 3-demethylubiquinone-9 3-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001039 248.0
BYD1_k127_9294519_37 Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P) . May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers K06955 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050664,GO:0051287,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000008834 258.0
BYD1_k127_9294519_38 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001284 241.0
BYD1_k127_9294519_39 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000007134 230.0
BYD1_k127_9294519_4 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 5.485e-260 813.0
BYD1_k127_9294519_40 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000009355 219.0
BYD1_k127_9294519_41 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000002603 222.0
BYD1_k127_9294519_42 (twin-arginine translocation) pathway signal - - - 0.000000000000000000000000000000000000000000000000000000007937 209.0
BYD1_k127_9294519_43 calcium, potassium:sodium antiporter activity K07301 - - 0.00000000000000000000000000000000000000000000000000000001035 223.0
BYD1_k127_9294519_44 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000000000000006568 189.0
BYD1_k127_9294519_45 - - - - 0.000000000000000000000000000000000000000000000000000593 192.0
BYD1_k127_9294519_46 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000006138 191.0
BYD1_k127_9294519_47 COG0655 Multimeric flavodoxin WrbA - - - 0.0000000000000000000000000000000000000000000000006358 181.0
BYD1_k127_9294519_48 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000756 173.0
BYD1_k127_9294519_49 MASE1 - - - 0.0000000000000000000000000000000000000000000001112 186.0
BYD1_k127_9294519_5 Belongs to the GcvT family K00302 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.3.1 1.288e-254 822.0
BYD1_k127_9294519_50 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.0000000000000000000000000000000000000000000001453 172.0
BYD1_k127_9294519_51 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000004719 167.0
BYD1_k127_9294519_52 - - - - 0.0000000000000000000000000000000000000000004808 164.0
BYD1_k127_9294519_53 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000000000001897 159.0
BYD1_k127_9294519_54 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000003468 163.0
BYD1_k127_9294519_55 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000004022 163.0
BYD1_k127_9294519_56 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000663 156.0
BYD1_k127_9294519_57 - K01992 - - 0.000000000000000000000000000000000000002217 162.0
BYD1_k127_9294519_58 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000004891 156.0
BYD1_k127_9294519_6 peroxidase - - - 5.901e-221 692.0
BYD1_k127_9294519_60 - - - - 0.0000000000000000000000000000000000004575 144.0
BYD1_k127_9294519_61 Protein of unknown function (DUF3667) - - - 0.00000000000000000000000000000000001028 155.0
BYD1_k127_9294519_62 - - - - 0.00000000000000000000000000000000003324 142.0
BYD1_k127_9294519_63 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000005312 134.0
BYD1_k127_9294519_64 FR47-like protein - - - 0.000000000000000000000000000000005962 134.0
BYD1_k127_9294519_65 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.00000000000000000000000000000001717 127.0
BYD1_k127_9294519_66 ABC transporter substrate-binding protein K02067 - - 0.000000000000000000000000000005533 131.0
BYD1_k127_9294519_67 CAAX protease self-immunity K07052 - - 0.000000000000000000000000006861 120.0
BYD1_k127_9294519_68 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000003377 123.0
BYD1_k127_9294519_69 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.0000000000000000000000001287 110.0
BYD1_k127_9294519_7 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 573.0
BYD1_k127_9294519_70 Diguanylate cyclase - - - 0.000000000000000000000006021 117.0
BYD1_k127_9294519_71 membrane - - - 0.00000000000000000000006807 105.0
BYD1_k127_9294519_72 Protein of unknown function (DUF3144) - - - 0.00000000000000000000007207 102.0
BYD1_k127_9294519_73 Belongs to the UPF0235 family K09131 - - 0.0000000000000000000001592 100.0
BYD1_k127_9294519_74 YjbR - - - 0.00000000000000000000806 95.0
BYD1_k127_9294519_75 - - - - 0.000000000000000001347 91.0
BYD1_k127_9294519_76 Dodecin K09165 - - 0.000000000000000001993 90.0
BYD1_k127_9294519_77 - - - - 0.000000000000000003556 88.0
BYD1_k127_9294519_78 - - - - 0.00000000000000005967 87.0
BYD1_k127_9294519_79 helix_turn_helix ASNC type K03719 - - 0.0000000000000001246 85.0
BYD1_k127_9294519_8 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006332 572.0
BYD1_k127_9294519_80 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000001425 94.0
BYD1_k127_9294519_81 - - - - 0.000000000001266 77.0
BYD1_k127_9294519_82 - - - - 0.000000000001515 74.0
BYD1_k127_9294519_83 Type II secretion system protein B K02451 - - 0.00000000008147 76.0
BYD1_k127_9294519_84 Acetyltransferase (GNAT) domain - - - 0.0000000007919 70.0
BYD1_k127_9294519_85 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000002595 70.0
BYD1_k127_9294519_86 Maltose operon periplasmic protein precursor (MalM) K05775 - - 0.000000004337 66.0
BYD1_k127_9294519_87 chaperone-mediated protein folding - - - 0.0000003382 64.0
BYD1_k127_9294519_88 Putative adhesin - - - 0.0000003746 63.0
BYD1_k127_9294519_89 - - - - 0.000001945 55.0
BYD1_k127_9294519_9 glutamate decarboxylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 572.0
BYD1_k127_9294519_90 TIGRFAM sarcosine oxidase, gamma subunit family, heterotetrameric form K00305 - 1.5.3.1 0.0000214 55.0
BYD1_k127_9325643_0 Domain of unknown function (DUF4105) - - - 2.189e-214 683.0
BYD1_k127_9325643_1 COG1233 Phytoene dehydrogenase and related proteins K09835 - 5.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 567.0
BYD1_k127_9325643_2 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 517.0
BYD1_k127_9325643_3 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 409.0
BYD1_k127_9325643_4 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 352.0
BYD1_k127_9325643_5 Protein of unknown function (DUF2388) - - - 0.00000000000000000006287 94.0
BYD1_k127_9325643_6 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0005538 45.0
BYD1_k127_9330678_0 GMC oxidoreductase - - - 1.871e-222 756.0
BYD1_k127_9330678_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 310.0
BYD1_k127_9330678_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000005482 191.0
BYD1_k127_9330678_3 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000001606 195.0
BYD1_k127_9330678_4 D-arabinono-1,4-lactone oxidase K00103 - 1.1.3.8 0.0000000000000000000000000000002573 139.0
BYD1_k127_9330678_5 Pfam Major Facilitator Superfamily - - - 0.0000000000000000000003698 96.0
BYD1_k127_9330678_6 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000004048 67.0
BYD1_k127_9344055_0 Formiminotransferase-cyclodeaminase K00603,K13990 - 2.1.2.5,4.3.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 548.0
BYD1_k127_9344055_1 PFAM Peptidase family M20 M25 M40 K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 399.0
BYD1_k127_9344055_10 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000249 229.0
BYD1_k127_9344055_11 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000003416 227.0
BYD1_k127_9344055_12 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000001727 216.0
BYD1_k127_9344055_13 Tryptophan-rich sensory protein K05770 - - 0.00000000000000000000000000000000000000000000000000000000000006291 217.0
BYD1_k127_9344055_14 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000007372 212.0
BYD1_k127_9344055_15 dioxygenase of extradiol dioxygenase family K06991 - - 0.00000000000000000000000000000000000000000000000000000000003932 216.0
BYD1_k127_9344055_16 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000001157 210.0
BYD1_k127_9344055_17 Endoribonuclease L-PSP K10013 - - 0.00000000000000000000000000000000000000000000000000003144 192.0
BYD1_k127_9344055_18 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000000000000000001334 182.0
BYD1_k127_9344055_19 OsmC-like protein K04063 - - 0.0000000000000000000000000000000000000000000000001625 201.0
BYD1_k127_9344055_2 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 326.0
BYD1_k127_9344055_20 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.00000000000000000000000000000000000000000000006937 173.0
BYD1_k127_9344055_21 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000005832 168.0
BYD1_k127_9344055_22 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000009794 165.0
BYD1_k127_9344055_23 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000283 153.0
BYD1_k127_9344055_24 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000001805 144.0
BYD1_k127_9344055_25 Protein of unknown function (DUF3303) - - - 0.0000000000000000000000000000000006824 132.0
BYD1_k127_9344055_26 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000102 142.0
BYD1_k127_9344055_27 light absorption K06893 - - 0.000000000000000000000000007213 114.0
BYD1_k127_9344055_29 lipoprotein NlpE involved in copper resistance - - - 0.00000000000000000000631 107.0
BYD1_k127_9344055_3 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 297.0
BYD1_k127_9344055_30 Cytochrome C' - - - 0.00000000000000001649 88.0
BYD1_k127_9344055_31 - - - - 0.00000000000000007492 91.0
BYD1_k127_9344055_32 SnoaL-like polyketide cyclase - - - 0.0000000000009053 74.0
BYD1_k127_9344055_33 Domain of unknown function (DUF4431) - - - 0.00000004913 61.0
BYD1_k127_9344055_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 285.0
BYD1_k127_9344055_5 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009769 274.0
BYD1_k127_9344055_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002861 273.0
BYD1_k127_9344055_7 Protein of unknown function (DUF541) K09797 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001106 269.0
BYD1_k127_9344055_8 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000004506 239.0
BYD1_k127_9344055_9 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000000003647 226.0
BYD1_k127_9563863_0 Nitrite reductase K15864 - 1.7.2.1,1.7.99.1 4.579e-318 987.0
BYD1_k127_9563863_1 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 1.792e-276 861.0
BYD1_k127_9563863_10 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 520.0
BYD1_k127_9563863_11 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004314 522.0
BYD1_k127_9563863_12 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 525.0
BYD1_k127_9563863_13 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008519 500.0
BYD1_k127_9563863_14 Homospermidine synthase K00808 - 2.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 500.0
BYD1_k127_9563863_15 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 483.0
BYD1_k127_9563863_16 oxidoreductase K09471 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 466.0
BYD1_k127_9563863_17 Involved in arsenical resistance. Thought to form the channel of an arsenite pump - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 445.0
BYD1_k127_9563863_18 TonB-dependent heme hemoglobin receptor K16087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 474.0
BYD1_k127_9563863_19 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 449.0
BYD1_k127_9563863_2 Prolyl oligopeptidase family - - - 7.737e-234 743.0
BYD1_k127_9563863_20 Aminotransferase K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006503 441.0
BYD1_k127_9563863_21 Binding-protein-dependent transport system inner membrane component K11071,K11075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 410.0
BYD1_k127_9563863_22 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 424.0
BYD1_k127_9563863_23 PFAM bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 386.0
BYD1_k127_9563863_24 2-oxoacid dehydrogenases acyltransferase (catalytic domain) K09699 - 2.3.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 403.0
BYD1_k127_9563863_25 Binding-protein-dependent transport system inner membrane component K11070,K11074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 382.0
BYD1_k127_9563863_26 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 364.0
BYD1_k127_9563863_27 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 356.0
BYD1_k127_9563863_28 Branched-chain amino acid aminotransferase K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 344.0
BYD1_k127_9563863_29 Alpha beta hydrolase K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000517 324.0
BYD1_k127_9563863_3 Amidohydrolase family K06015 - 3.5.1.81 3.967e-221 699.0
BYD1_k127_9563863_30 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 330.0
BYD1_k127_9563863_31 Gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 292.0
BYD1_k127_9563863_32 PFAM Cys Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000045 289.0
BYD1_k127_9563863_33 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005193 266.0
BYD1_k127_9563863_34 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009449 245.0
BYD1_k127_9563863_35 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000009121 240.0
BYD1_k127_9563863_36 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002464 244.0
BYD1_k127_9563863_38 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000601 228.0
BYD1_k127_9563863_39 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000002624 206.0
BYD1_k127_9563863_4 Isocitrate dehydrogenase - - - 4.882e-220 687.0
BYD1_k127_9563863_40 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000001585 200.0
BYD1_k127_9563863_41 PFAM thioesterase superfamily protein - - - 0.000000000000000000000000000000000000000000000006231 175.0
BYD1_k127_9563863_42 NIPSNAP - - - 0.00000000000000000000000000000000000000000000003577 174.0
BYD1_k127_9563863_43 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000389 182.0
BYD1_k127_9563863_44 MAPEG family - - - 0.0000000000000000000000000000000000000000000001401 171.0
BYD1_k127_9563863_45 helix_turn_helix ASNC type K05800 - - 0.0000000000000000000000000000000000000000000008395 173.0
BYD1_k127_9563863_46 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000001438 168.0
BYD1_k127_9563863_47 Domain of unknown function (DUF4399) - - - 0.00000000000000000000000000000000000000000002391 165.0
BYD1_k127_9563863_48 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000006726 162.0
BYD1_k127_9563863_49 - - - - 0.00000000000000000000000000000009488 128.0
BYD1_k127_9563863_5 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 7.466e-219 711.0
BYD1_k127_9563863_50 - - - - 0.000000000000000000000000000008599 122.0
BYD1_k127_9563863_51 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000004656 118.0
BYD1_k127_9563863_52 Domain of unknown function (DU1801) - - - 0.000000000000000000000000001051 115.0
BYD1_k127_9563863_53 Putative inner membrane exporter, YdcZ K09936 - - 0.000000000000000000000000008504 114.0
BYD1_k127_9563863_54 Domain of unknown function (DUF4440) - - - 0.000000000000000000000005872 106.0
BYD1_k127_9563863_55 Domain of unknown function (DUF4440) - - - 0.0000000000000000003024 93.0
BYD1_k127_9563863_56 sequence-specific DNA binding K07729 - - 0.000000000002317 70.0
BYD1_k127_9563863_57 Addiction module toxin, RelE StbE family K07334 - - 0.00000000000261 68.0
BYD1_k127_9563863_58 determination of stomach left/right asymmetry K19360 - - 0.000000005491 63.0
BYD1_k127_9563863_59 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00000001793 58.0
BYD1_k127_9563863_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 1.351e-201 636.0
BYD1_k127_9563863_60 Helix-turn-helix domain - - - 0.00000002055 60.0
BYD1_k127_9563863_62 - - - - 0.0008692 46.0
BYD1_k127_9563863_7 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 1.085e-200 633.0
BYD1_k127_9563863_8 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 521.0
BYD1_k127_9563863_9 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004721,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009987,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 538.0
BYD1_k127_9602000_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009031 568.0
BYD1_k127_9602000_1 Acetyltransferase (GNAT) domain K00663 - 2.3.1.82 0.000000000000000000000000000000000000000000000000000000000007724 215.0
BYD1_k127_9602000_2 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000003753 209.0
BYD1_k127_9602000_3 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.00000000000000000000000000000000001424 139.0
BYD1_k127_961089_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1272.0
BYD1_k127_961089_1 DNA ligase K01971 - 6.5.1.1 0.0 1054.0
BYD1_k127_961089_10 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 1.009e-210 661.0
BYD1_k127_961089_100 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000635 176.0
BYD1_k127_961089_101 Nudix hydrolase - - - 0.000000000000000000000000000000000000000000101 181.0
BYD1_k127_961089_102 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 - 0.0000000000000000000000000000000000000000005209 164.0
BYD1_k127_961089_103 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000005871 164.0
BYD1_k127_961089_104 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000002583 159.0
BYD1_k127_961089_105 Cytochrome C biogenesis K02200 - - 0.00000000000000000000000000000000000000004693 171.0
BYD1_k127_961089_106 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000003779 161.0
BYD1_k127_961089_107 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000006874 153.0
BYD1_k127_961089_108 Thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000005078 166.0
BYD1_k127_961089_109 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000001801 147.0
BYD1_k127_961089_11 Aldehyde dehydrogenase family K00128 - 1.2.1.3 6.293e-208 666.0
BYD1_k127_961089_110 - - - - 0.00000000000000000000000000000000001692 147.0
BYD1_k127_961089_111 Planctomycete cytochrome C - - - 0.00000000000000000000000000000000003218 138.0
BYD1_k127_961089_112 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000001682 136.0
BYD1_k127_961089_113 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000004442 128.0
BYD1_k127_961089_114 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000005962 135.0
BYD1_k127_961089_115 Nodulation protein S (NodS) K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000001527 136.0
BYD1_k127_961089_116 Type II secretion system (T2SS), protein J - - - 0.00000000000000000000000000002314 131.0
BYD1_k127_961089_117 Polysaccharide biosynthesis protein K03328,K16695 - - 0.000000000000000000000000003839 128.0
BYD1_k127_961089_118 Outer membrane lipoprotein - - - 0.00000000000000000000000003378 118.0
BYD1_k127_961089_12 2-methylcitrate dehydratase K01720 - 4.2.1.79 1.132e-207 660.0
BYD1_k127_961089_120 protein acetylation - - - 0.0000000000000000000000004835 113.0
BYD1_k127_961089_121 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000917 116.0
BYD1_k127_961089_122 Tetratricopeptide repeat - - - 0.0000000000000000000000175 115.0
BYD1_k127_961089_123 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000000000000000000006347 115.0
BYD1_k127_961089_125 Glycosyl transferase family 2 K07011 - - 0.0000000000000000000003693 110.0
BYD1_k127_961089_126 general secretion pathway protein K02458 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000000000000000000002405 101.0
BYD1_k127_961089_127 - - - - 0.000000000000000000003083 107.0
BYD1_k127_961089_128 COG2863 Cytochrome c553 - - - 0.000000000000000000005572 106.0
BYD1_k127_961089_129 TIGRFAM TonB family protein K03832 - - 0.000000000000000000007025 100.0
BYD1_k127_961089_13 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 1.876e-205 643.0
BYD1_k127_961089_130 relative of glutathione S-transferase, MAPEG superfamily K07136 - - 0.00000000000000000002082 102.0
BYD1_k127_961089_131 Type II secretion system (T2SS), protein N - - - 0.00000000000000000002229 100.0
BYD1_k127_961089_132 Type II secretion system (T2SS), protein L K02461 - - 0.0000000000000000000871 102.0
BYD1_k127_961089_133 Domain of unknown function (DUF1330) - - - 0.0000000000000000001033 95.0
BYD1_k127_961089_134 Type II transport protein GspH K02457 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000000001413 95.0
BYD1_k127_961089_135 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000001904 103.0
BYD1_k127_961089_136 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000008036 101.0
BYD1_k127_961089_137 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.000000000000000003311 91.0
BYD1_k127_961089_138 Cytochrome c class I - - - 0.000000000000000006327 96.0
BYD1_k127_961089_139 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.000000000000000152 94.0
BYD1_k127_961089_14 Acetyl-CoA dehydrogenase C-terminal like - - - 6.034e-204 658.0
BYD1_k127_961089_140 PFAM Glycosyl transferase family 2 - - - 0.0000000000000002328 89.0
BYD1_k127_961089_141 PFAM Cytochrome c, class I - - - 0.0000000000000007404 82.0
BYD1_k127_961089_142 proteolysis - - - 0.000000000000003614 83.0
BYD1_k127_961089_143 TraX protein - - - 0.00000000000001327 85.0
BYD1_k127_961089_144 MTH538 TIR-like domain (DUF1863) - - - 0.00000000000003497 80.0
BYD1_k127_961089_145 DNA-binding transcription factor activity K03741,K03892 - 1.20.4.1 0.0000000000001698 76.0
BYD1_k127_961089_146 ATPases associated with a variety of cellular activities K02013,K21480 - 1.14.15.20,3.6.3.34 0.0000000000003239 78.0
BYD1_k127_961089_147 Beta-L-arabinofuranosidase, GH127 K09955 - - 0.0000000000003898 74.0
BYD1_k127_961089_148 COG2863 Cytochrome c553 - - - 0.0000000000007485 81.0
BYD1_k127_961089_149 PFAM response regulator receiver - - - 0.000000000002433 77.0
BYD1_k127_961089_15 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 2.642e-202 657.0
BYD1_k127_961089_150 Formyl transferase - - - 0.00000000000671 78.0
BYD1_k127_961089_152 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000007614 65.0
BYD1_k127_961089_153 PFAM Cytochrome C - - - 0.0000000008705 71.0
BYD1_k127_961089_154 cytochrome - - - 0.000000001528 70.0
BYD1_k127_961089_155 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000000001786 65.0
BYD1_k127_961089_156 Glycosyl transferase group 2 family protein K12987,K12988 - - 0.000000008393 67.0
BYD1_k127_961089_16 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 9.718e-202 656.0
BYD1_k127_961089_17 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 5.003e-194 622.0
BYD1_k127_961089_18 Belongs to the citrate synthase family K01659 - 2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 590.0
BYD1_k127_961089_19 phospho-2-dehydro-3-deoxyheptonate aldolase K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 589.0
BYD1_k127_961089_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 7.701e-271 849.0
BYD1_k127_961089_20 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004972 535.0
BYD1_k127_961089_21 belongs to the aldehyde dehydrogenase family K00128,K00154 - 1.2.1.3,1.2.1.68 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 516.0
BYD1_k127_961089_22 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 514.0
BYD1_k127_961089_23 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 506.0
BYD1_k127_961089_24 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 487.0
BYD1_k127_961089_25 Asparaginase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 484.0
BYD1_k127_961089_26 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 477.0
BYD1_k127_961089_27 PFAM asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 479.0
BYD1_k127_961089_28 saccharopine dehydrogenase activity K00290 - 1.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008335 457.0
BYD1_k127_961089_29 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 454.0
BYD1_k127_961089_3 Fumarase C C-terminus - - - 3.516e-244 763.0
BYD1_k127_961089_30 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 422.0
BYD1_k127_961089_31 component I K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004539 444.0
BYD1_k127_961089_32 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 418.0
BYD1_k127_961089_33 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 409.0
BYD1_k127_961089_34 NfeD-like C-terminal, partner-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 417.0
BYD1_k127_961089_35 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 402.0
BYD1_k127_961089_36 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005204 402.0
BYD1_k127_961089_37 Domain of unknown function (DUF4010) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004066 384.0
BYD1_k127_961089_38 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 387.0
BYD1_k127_961089_39 - K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 366.0
BYD1_k127_961089_4 Cytochrome c-type biogenesis protein CcmF K02198 - - 3.427e-226 727.0
BYD1_k127_961089_40 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 354.0
BYD1_k127_961089_41 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 342.0
BYD1_k127_961089_42 (ABC) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 357.0
BYD1_k127_961089_43 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 346.0
BYD1_k127_961089_44 transporter, permease K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 346.0
BYD1_k127_961089_45 COGs COG5616 integral membrane protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 356.0
BYD1_k127_961089_46 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 343.0
BYD1_k127_961089_47 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 337.0
BYD1_k127_961089_48 electron transfer flavoprotein beta subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 335.0
BYD1_k127_961089_49 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006807,GO:0008150,GO:0008152,GO:0008932,GO:0008933,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0030203,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0042597,GO:0043170,GO:0044425,GO:0044459,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 335.0
BYD1_k127_961089_5 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 3.138e-223 733.0
BYD1_k127_961089_50 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001229 319.0
BYD1_k127_961089_51 cytochrome C family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 336.0
BYD1_k127_961089_52 Glutathione-dependent formaldehyde-activating enzyme K03396 - 4.4.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004955 308.0
BYD1_k127_961089_53 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 311.0
BYD1_k127_961089_54 Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 318.0
BYD1_k127_961089_55 ATP ADP translocase K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 308.0
BYD1_k127_961089_56 exonuclease activity K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 323.0
BYD1_k127_961089_57 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 297.0
BYD1_k127_961089_58 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 292.0
BYD1_k127_961089_59 Oligopeptide/dipeptide transporter, C-terminal region K02031,K15583 GO:0000166,GO:0003674,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0008144,GO:0016020,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 290.0
BYD1_k127_961089_6 Cytochrome c554 and c-prime - - - 5.507e-217 692.0
BYD1_k127_961089_60 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001234 302.0
BYD1_k127_961089_61 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001425 288.0
BYD1_k127_961089_62 MazG nucleotide pyrophosphohydrolase domain K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002305 284.0
BYD1_k127_961089_63 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004698 299.0
BYD1_k127_961089_64 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000263 280.0
BYD1_k127_961089_65 Histidine kinase K07637 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005669 291.0
BYD1_k127_961089_66 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007752 297.0
BYD1_k127_961089_67 PFAM Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001271 273.0
BYD1_k127_961089_68 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009086 291.0
BYD1_k127_961089_69 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000101 267.0
BYD1_k127_961089_7 Belongs to the malate synthase family K01638 - 2.3.3.9 2.218e-216 686.0
BYD1_k127_961089_70 denitrification pathway - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002074 276.0
BYD1_k127_961089_71 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001399 267.0
BYD1_k127_961089_72 Belongs to the ABC transporter superfamily K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000182 282.0
BYD1_k127_961089_73 homoserine kinase activity K02204,K13059 - 2.7.1.162,2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000009924 265.0
BYD1_k127_961089_74 EamA-like transporter family K15268 - - 0.000000000000000000000000000000000000000000000000000000000000000000000038 252.0
BYD1_k127_961089_75 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006671 247.0
BYD1_k127_961089_76 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008242 246.0
BYD1_k127_961089_77 PFAM sulfotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004389 248.0
BYD1_k127_961089_78 bacteriocin transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000481 241.0
BYD1_k127_961089_79 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002853 246.0
BYD1_k127_961089_8 3-hydroxyacyl-coa dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 3.59e-215 687.0
BYD1_k127_961089_80 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000007198 217.0
BYD1_k127_961089_81 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.00000000000000000000000000000000000000000000000000000000000105 219.0
BYD1_k127_961089_82 Peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000188 214.0
BYD1_k127_961089_83 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000004291 211.0
BYD1_k127_961089_84 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000002541 207.0
BYD1_k127_961089_85 Periplasmic protein thiol K02199 - - 0.0000000000000000000000000000000000000000000000000000002069 204.0
BYD1_k127_961089_86 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000000302 206.0
BYD1_k127_961089_87 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000002323 202.0
BYD1_k127_961089_88 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000001408 190.0
BYD1_k127_961089_89 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000008524 196.0
BYD1_k127_961089_9 Cytochrome c554 and c-prime - - - 1.371e-212 679.0
BYD1_k127_961089_90 COG3156 Type II secretory pathway, component PulK K02460 - - 0.0000000000000000000000000000000000000000000000000008803 204.0
BYD1_k127_961089_92 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000001406 191.0
BYD1_k127_961089_93 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000004431 200.0
BYD1_k127_961089_94 - - - - 0.00000000000000000000000000000000000000000000000003095 188.0
BYD1_k127_961089_95 Pilus assembly protein PilZ K02676 - - 0.00000000000000000000000000000000000000000000000005543 183.0
BYD1_k127_961089_96 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0031224,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000007052 204.0
BYD1_k127_961089_97 - - - - 0.00000000000000000000000000000000000000000000000008704 188.0
BYD1_k127_961089_98 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000002193 180.0
BYD1_k127_961089_99 DNA polymerase III subunit delta K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000001524 175.0
BYD1_k127_9691971_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1279.0
BYD1_k127_9691971_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 5.203e-294 914.0
BYD1_k127_9691971_10 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 348.0
BYD1_k127_9691971_11 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 346.0
BYD1_k127_9691971_12 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 306.0
BYD1_k127_9691971_13 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 GO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000008105 273.0
BYD1_k127_9691971_14 Urate oxidase N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000006908 217.0
BYD1_k127_9691971_15 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000003104 203.0
BYD1_k127_9691971_16 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000001742 178.0
BYD1_k127_9691971_17 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000007006 180.0
BYD1_k127_9691971_18 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000003575 154.0
BYD1_k127_9691971_2 PFAM biotin lipoyl attachment domain-containing protein K00382 - 1.8.1.4 5.505e-218 702.0
BYD1_k127_9691971_20 Berberine and berberine like - - - 0.00000000000000000000000177 112.0
BYD1_k127_9691971_21 Transcriptional regulatory protein, C terminal - - - 0.0000000000001357 81.0
BYD1_k127_9691971_22 Protein of unknown function (DUF1289) - - - 0.0000000000005864 70.0
BYD1_k127_9691971_23 S-layer homology domain - - - 0.000000000001341 81.0
BYD1_k127_9691971_24 FHA domain K07315 - 3.1.3.3 0.00000000001096 76.0
BYD1_k127_9691971_25 Cytochrome c K12263 - - 0.000000000448 69.0
BYD1_k127_9691971_26 FAD linked oxidase - - - 0.000000007191 64.0
BYD1_k127_9691971_3 serine threonine protein kinase K12132 - 2.7.11.1 1.574e-201 660.0
BYD1_k127_9691971_4 PFAM Type II secretion system protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000344 503.0
BYD1_k127_9691971_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 496.0
BYD1_k127_9691971_6 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 455.0
BYD1_k127_9691971_7 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 445.0
BYD1_k127_9691971_8 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 437.0
BYD1_k127_9691971_9 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 394.0
BYD1_k127_9727531_0 Subtilase family - - - 2.273e-276 874.0
BYD1_k127_9727531_1 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 548.0
BYD1_k127_9727531_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 507.0
BYD1_k127_9727531_3 - - - - 0.00000000000000000000000000000000000000000000001352 181.0
BYD1_k127_9727531_4 Forkhead associated domain - - - 0.000000000000000000000000000000000000000001444 168.0
BYD1_k127_9784973_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 3.07e-243 764.0
BYD1_k127_9784973_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009772 471.0
BYD1_k127_9784973_2 abc transporter atp-binding protein K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 337.0
BYD1_k127_9784973_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 303.0