Overview

ID MAG00012
Name BYD1_bin.20
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum ARS69
Class ARS69
Order ARS69
Family ARS69
Genus
Species
Assembly information
Completeness (%) 92.69
Contamination (%) 1.52
GC content (%) 63.0
N50 (bp) 5,394
Genome size (bp) 3,003,219

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2669

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10006959_0 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002755 250.0
BYD1_k127_10006959_1 eight transmembrane protein EpsH - - - 0.0000000000000000000000000000000000000000001173 177.0
BYD1_k127_10006959_2 TIGRFAM EpsI family protein - - - 0.000000000000000000004557 102.0
BYD1_k127_10024237_0 Carbamoyl-phosphate synthase L chain, ATP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 541.0
BYD1_k127_10024237_1 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 504.0
BYD1_k127_10024237_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 490.0
BYD1_k127_10024237_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 451.0
BYD1_k127_10024237_4 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 420.0
BYD1_k127_10024237_5 Belongs to the peptidase S51 family - - - 0.0000000000000000000000000000000000000000000000007695 198.0
BYD1_k127_10024237_6 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.000945 43.0
BYD1_k127_10036457_0 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005061 383.0
BYD1_k127_10042225_0 COG0471 Di- and tricarboxylate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 579.0
BYD1_k127_10042225_1 COG2133 Glucose sorbosone dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 436.0
BYD1_k127_10042225_2 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000006388 159.0
BYD1_k127_10042225_3 Sulfatase - - - 0.0000000000000000000000000000000000000001163 171.0
BYD1_k127_10042225_4 CAAX protease self-immunity K07052 - - 0.00000000000006926 82.0
BYD1_k127_10042225_5 PA14 - - - 0.000000000001213 83.0
BYD1_k127_10042225_6 pilus organization K02674,K07004 - - 0.00000002427 68.0
BYD1_k127_10042225_7 His Kinase A (phosphoacceptor) domain K07636,K07654 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0040007,GO:0044424,GO:0044444,GO:0044464 2.7.13.3 0.00002366 55.0
BYD1_k127_10042477_0 polyphosphate kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 486.0
BYD1_k127_10042477_1 PFAM lipopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000004141 181.0
BYD1_k127_10042477_2 Glycosyl transferase, family 9 K02841,K02843,K02847,K02849,K21003 - - 0.0000000000000000000000000000002175 141.0
BYD1_k127_10042477_3 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000001452 115.0
BYD1_k127_1005322_0 Outer membrane protein, OMP85 family K07277 - - 0.0000000000000000003192 101.0
BYD1_k127_1005322_1 Polymer-forming cytoskeletal - - - 0.00000007432 64.0
BYD1_k127_1005322_2 Protein of unknown function (DUF1573) - - - 0.0001388 55.0
BYD1_k127_10063542_0 Sigma-70 region 2 K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000003112 75.0
BYD1_k127_10063542_1 - - - - 0.0000000004629 65.0
BYD1_k127_10065773_0 PFAM Uncharacterised protein family (UPF0164) - - - 0.000000000000000000000000005299 123.0
BYD1_k127_1007063_0 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 424.0
BYD1_k127_1007063_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003079 265.0
BYD1_k127_1007063_2 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000002017 250.0
BYD1_k127_1007063_3 signal transduction histidine kinase K02668,K07709 - 2.7.13.3 0.00000000000000000000000000000000000000000000007002 194.0
BYD1_k127_1007063_4 COG0840 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000003025 109.0
BYD1_k127_1007063_5 Chemotaxis protein CheW - - - 0.00000005132 61.0
BYD1_k127_1007063_6 regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed - - - 0.00000215 58.0
BYD1_k127_1007063_7 peptidyl-tyrosine sulfation - - - 0.0008219 51.0
BYD1_k127_10072923_0 cell adhesion involved in biofilm formation K20276 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 519.0
BYD1_k127_10072923_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002588 272.0
BYD1_k127_10078044_0 Cupin domain - - - 0.0000000000000000000000000000000000007311 142.0
BYD1_k127_10078044_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000001209 149.0
BYD1_k127_10092941_0 Catalyzes the conversion of salicylyl-CoA to gentisyl-CoA K00219,K09461 - 1.14.13.40,1.3.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 562.0
BYD1_k127_10092941_1 NlpE C-terminal OB domain - - - 0.0000000000000000000000000000002488 132.0
BYD1_k127_10106376_0 PFAM PP-loop domain protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 301.0
BYD1_k127_10106376_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001234 287.0
BYD1_k127_10106376_2 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004515 280.0
BYD1_k127_10106376_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000002479 240.0
BYD1_k127_10106376_4 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000004976 240.0
BYD1_k127_10106376_5 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.4.23.36 0.00000000000000000000000000000001207 133.0
BYD1_k127_10106376_6 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000003027 103.0
BYD1_k127_10106376_7 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000000006325 100.0
BYD1_k127_10139782_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.997e-252 803.0
BYD1_k127_10139782_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 552.0
BYD1_k127_10139782_2 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 421.0
BYD1_k127_10139782_3 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 304.0
BYD1_k127_10139782_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000009172 230.0
BYD1_k127_10139782_5 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000000002661 175.0
BYD1_k127_10139782_6 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000005982 102.0
BYD1_k127_10156758_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K02887,K03628 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097659,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 1.225e-205 650.0
BYD1_k127_10156758_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 445.0
BYD1_k127_10156758_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 406.0
BYD1_k127_10156758_3 Belongs to the peptidase S8 family K13276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001021 288.0
BYD1_k127_10156758_4 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000005255 248.0
BYD1_k127_10156758_5 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000002976 168.0
BYD1_k127_10156758_6 Binds the 23S rRNA K02909 - - 0.000000000000000000000000008795 112.0
BYD1_k127_10174119_0 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase activity K11779,K11780,K11781,K11784,K18285 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016740,GO:0016765,GO:0044237,GO:0044249,GO:0044689,GO:0051186,GO:0051188 1.21.98.1,2.5.1.120,2.5.1.77 0.00000000000000000000000000000000001721 138.0
BYD1_k127_10174119_1 Protein of unknown function (DUF423) - - - 0.00000000000000000000000000000002905 130.0
BYD1_k127_10174119_2 4'-phosphopantetheinyl transferase superfamily K06133 - - 0.00000000000000000000004558 112.0
BYD1_k127_10174119_4 amine dehydrogenase activity K12287 - - 0.0000001625 61.0
BYD1_k127_10183062_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 361.0
BYD1_k127_10183062_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006914 254.0
BYD1_k127_10183062_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000004982 183.0
BYD1_k127_10183062_3 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000005533 150.0
BYD1_k127_10183062_4 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000001466 98.0
BYD1_k127_10183062_5 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000003844 78.0
BYD1_k127_10184143_0 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009612 466.0
BYD1_k127_10184143_1 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 405.0
BYD1_k127_10184143_2 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000005502 224.0
BYD1_k127_10184143_3 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000008378 188.0
BYD1_k127_10184143_4 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000002369 147.0
BYD1_k127_10184143_5 Domains HisKA, HATPase_c - - - 0.000000000000000000000000000000000001706 155.0
BYD1_k127_10184143_6 smart pdz dhr glgf K04771,K04772 - 3.4.21.107 0.00000000000000000000007474 114.0
BYD1_k127_10184143_7 exo-alpha-(2->6)-sialidase activity - - - 0.0000000881 64.0
BYD1_k127_10184143_8 aminotransferase class I and II - - - 0.00000134 55.0
BYD1_k127_10200051_0 oligopeptide transporter, OPT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004819 252.0
BYD1_k127_10200051_1 Transcriptional regulator, BadM Rrf2 family K13643 - - 0.00000000000000000000000000000003567 132.0
BYD1_k127_10200051_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000003969 110.0
BYD1_k127_10221946_0 ATP dependent DNA ligase C terminal region - - - 0.000000000000000000000000001979 114.0
BYD1_k127_10221946_1 regulation of cell-substrate adhesion K06079 - - 0.000000000000000000018 102.0
BYD1_k127_10221946_2 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000003279 61.0
BYD1_k127_10221946_3 - - - - 0.000004584 59.0
BYD1_k127_10226616_0 methyltransferase - - - 0.0000000000000000000000000000000000000000000000002457 187.0
BYD1_k127_10226616_1 acetyltransferase - - - 0.000000000000000000000000000000000001548 147.0
BYD1_k127_10226616_2 YjbR - - - 0.000000000000000000000000000000000005906 142.0
BYD1_k127_10226616_3 DoxX-like family - - - 0.00000000000000000000000000000000008629 138.0
BYD1_k127_10255977_0 BNR Asp-box repeat - - - 1.316e-212 689.0
BYD1_k127_10255977_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.000000000000000000000000000006098 122.0
BYD1_k127_10268718_0 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008766 280.0
BYD1_k127_10268718_1 Transcriptional regulator - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00005371 55.0
BYD1_k127_10284078_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008279 455.0
BYD1_k127_10284078_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 347.0
BYD1_k127_10306319_0 acid phosphatase activity K22390 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000001478 93.0
BYD1_k127_1031654_0 PFAM carboxyl transferase K15052 - 2.1.3.15,6.4.1.3 2.077e-243 773.0
BYD1_k127_1031654_1 COG4770 Acetyl propionyl-CoA carboxylase, alpha subunit K01965 - 6.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 451.0
BYD1_k127_1031654_2 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000008122 233.0
BYD1_k127_1031654_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000007379 198.0
BYD1_k127_1031654_4 Smr domain - - - 0.00000000000000000000000004088 110.0
BYD1_k127_1031654_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000002133 76.0
BYD1_k127_1031654_6 Biotin-requiring enzyme - - - 0.0000647 52.0
BYD1_k127_10322010_0 Methyltransferase domain - - - 0.00000000000000000000000000000001352 136.0
BYD1_k127_10322010_1 - - - - 0.000000000000000000000000000206 127.0
BYD1_k127_10324738_0 ASPIC and UnbV - - - 0.000000000000000000000000000000000000004147 158.0
BYD1_k127_10324738_1 TonB dependent receptor - - - 0.000000000000000000000001443 121.0
BYD1_k127_10324738_2 Sigma-70 region 2 K03088 - - 0.00000000000000000000001996 106.0
BYD1_k127_10330683_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000005894 224.0
BYD1_k127_10330683_1 Enoyl-(Acyl carrier protein) reductase - - - 0.000000214 55.0
BYD1_k127_1034063_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000000000000000000000004686 207.0
BYD1_k127_1034063_1 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000001947 113.0
BYD1_k127_10343142_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 298.0
BYD1_k127_10343142_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000006218 226.0
BYD1_k127_10343142_2 - - - - 0.00000000000003301 85.0
BYD1_k127_10353802_0 Lantibiotic biosynthesis dehydratase C-term K20483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 565.0
BYD1_k127_10353802_1 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000005523 232.0
BYD1_k127_10353802_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000003376 71.0
BYD1_k127_10386139_0 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 617.0
BYD1_k127_10386139_1 Permease YjgP YjgQ family protein K07091,K11720 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 306.0
BYD1_k127_10386139_2 Permease YjgP YjgQ K11720 - - 0.000000000000000000000000000000000000000000000000000000000000004357 231.0
BYD1_k127_10386139_3 Peptidase M28 - - - 0.00000000000000000000000000000000000000000000000000000000000008242 231.0
BYD1_k127_10386139_4 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000734 82.0
BYD1_k127_1039569_0 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 372.0
BYD1_k127_1039569_1 Competence protein - - - 0.00000000000000002281 93.0
BYD1_k127_1039569_2 Domain of unknown function (DUF3473) - - - 0.00000000004751 73.0
BYD1_k127_10424103_0 Thiamine biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 314.0
BYD1_k127_10424103_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001244 259.0
BYD1_k127_10425519_0 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 463.0
BYD1_k127_10425519_1 cellulase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 322.0
BYD1_k127_10425519_2 EamA-like transporter family - - - 0.00000000000000000000000001325 115.0
BYD1_k127_10425519_3 Uncharacterized conserved protein (DUF2203) - - - 0.000000000003264 72.0
BYD1_k127_10425519_4 Ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000002475 65.0
BYD1_k127_10458007_0 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 390.0
BYD1_k127_10458007_1 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000003788 239.0
BYD1_k127_10458007_2 Hydrolase, NUDIX family K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000003874 175.0
BYD1_k127_10458007_3 40-residue YVTN family beta-propeller repeat - - - 0.000000000000001188 90.0
BYD1_k127_10458007_4 phosphorelay signal transduction system - - - 0.000009661 58.0
BYD1_k127_1047823_0 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000321 237.0
BYD1_k127_1047823_1 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.000000000000000000000000000000000002874 147.0
BYD1_k127_10507075_0 AcrB/AcrD/AcrF family K15726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 492.0
BYD1_k127_10507075_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000136 246.0
BYD1_k127_10561403_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 563.0
BYD1_k127_10561403_1 UTP--glucose-1-phosphate uridylyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005097 490.0
BYD1_k127_10561403_2 Protein of unknown function (DUF3810) - - - 0.0000000000000000000000000000000000000000001645 173.0
BYD1_k127_10561403_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000007485 111.0
BYD1_k127_10561403_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.00000000000000000000003855 104.0
BYD1_k127_10561403_5 C4-type zinc ribbon domain K07164 - - 0.0002532 48.0
BYD1_k127_10582844_0 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and K03182 - 4.1.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 481.0
BYD1_k127_10582844_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.000000000000000000000000000000000000000000000000000000000009345 226.0
BYD1_k127_10589526_0 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 383.0
BYD1_k127_10589526_1 Phosphotransferase enzyme family - - - 0.00001737 56.0
BYD1_k127_10592344_0 peptidase S9 prolyl oligopeptidase active site K01303 - 3.4.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 466.0
BYD1_k127_10593334_0 Belongs to the peptidase S16 family K01338,K04076,K04770 - 3.4.21.53 2.89e-204 664.0
BYD1_k127_10593334_1 peptidase dimerisation domain K01436 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 328.0
BYD1_k127_10593334_2 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000209 186.0
BYD1_k127_10593334_3 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000002294 176.0
BYD1_k127_10593334_4 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000003357 171.0
BYD1_k127_10593334_5 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.00000000000000000000000000000000000001342 157.0
BYD1_k127_10593334_6 PFAM Polysaccharide deacetylase - - - 0.00000000003647 76.0
BYD1_k127_10602075_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008146 370.0
BYD1_k127_10602075_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000007527 238.0
BYD1_k127_10602075_2 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000002857 116.0
BYD1_k127_10602075_3 methyltransferase - - - 0.00000000000000003936 91.0
BYD1_k127_10604012_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000138 192.0
BYD1_k127_10604012_1 - - - - 0.000000000000002237 91.0
BYD1_k127_10604012_2 pectinesterase activity - - - 0.0000003336 63.0
BYD1_k127_10606837_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1233.0
BYD1_k127_10606837_1 Barrel-sandwich domain of CusB or HlyD membrane-fusion K07798 - - 0.000000000000000000000000000000000000000000000000000000000000001647 235.0
BYD1_k127_10606837_2 Conserved repeat domain - - - 0.00000000001197 68.0
BYD1_k127_106077_0 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000189 229.0
BYD1_k127_106077_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000002923 239.0
BYD1_k127_106077_2 Methyltransferase type 12 - - - 0.00000000000000000000000000000000001881 147.0
BYD1_k127_106077_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000004581 104.0
BYD1_k127_106077_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000005093 102.0
BYD1_k127_106077_5 membrane organization - - - 0.000002391 60.0
BYD1_k127_106077_6 PFAM Bacterial Ig-like domain (group 2) - - - 0.00000265 59.0
BYD1_k127_10639443_0 Belongs to the malate synthase family K01638 - 2.3.3.9 3.823e-227 715.0
BYD1_k127_10639443_1 PFAM isocitrate lyase and phosphorylmutase K01637 - 4.1.3.1 5.327e-203 640.0
BYD1_k127_10639443_2 IrrE N-terminal-like domain K07110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 524.0
BYD1_k127_10645701_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000004845 121.0
BYD1_k127_10645701_1 oligosaccharyl transferase activity - - - 0.0000000000000004646 92.0
BYD1_k127_10645701_2 tetratricopeptide repeat - - - 0.00001676 57.0
BYD1_k127_10666488_0 COG0624, acetylornithine deacetylase succinyl-diaminopimelate desuccinylase and related deacylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 417.0
BYD1_k127_1067706_0 Transglycosylase K05366 GO:0003674,GO:0005488,GO:0005515,GO:0042802 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 537.0
BYD1_k127_1067706_1 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 472.0
BYD1_k127_1067706_10 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.000000000000000000000005012 113.0
BYD1_k127_1067706_11 Belongs to the bacterial ribosomal protein bL33 family K02913 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000007071 76.0
BYD1_k127_1067706_12 protein secretion - - - 0.0000000004061 71.0
BYD1_k127_1067706_13 Domain of unknown function (DUF1844) - - - 0.0001277 49.0
BYD1_k127_1067706_2 pyrimidine-nucleoside phosphorylase K00756 - 2.4.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 420.0
BYD1_k127_1067706_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 394.0
BYD1_k127_1067706_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 301.0
BYD1_k127_1067706_5 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000002858 247.0
BYD1_k127_1067706_6 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.000000000000000000000000000000000000000000000000000000001255 220.0
BYD1_k127_1067706_7 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.00000000000000000000000000000000000000000004526 173.0
BYD1_k127_1067706_8 Belongs to the ompA family K20276 - - 0.0000000000000000000000000000000000000000001611 179.0
BYD1_k127_1067706_9 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000001846 110.0
BYD1_k127_10682173_0 Sugar-specific transcriptional regulator TrmB K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000001067 205.0
BYD1_k127_10682173_1 Carbonic anhydrase K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000007597 193.0
BYD1_k127_10682173_2 NHL repeat - - - 0.00000000000000008439 85.0
BYD1_k127_10719345_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 389.0
BYD1_k127_10719345_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 371.0
BYD1_k127_10719345_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000003591 164.0
BYD1_k127_10719345_11 cytoplasmic translation K02946 GO:0001072,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0015935,GO:0019219,GO:0019222,GO:0019538,GO:0022626,GO:0022627,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0140110,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000002157 153.0
BYD1_k127_10719345_12 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000003351 145.0
BYD1_k127_10719345_13 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000004248 137.0
BYD1_k127_10719345_14 Binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000002103 138.0
BYD1_k127_10719345_15 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000003555 124.0
BYD1_k127_10719345_16 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000001221 119.0
BYD1_k127_10719345_17 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000002296 115.0
BYD1_k127_10719345_18 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000009037 107.0
BYD1_k127_10719345_19 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000005164 109.0
BYD1_k127_10719345_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001894 283.0
BYD1_k127_10719345_20 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000001667 73.0
BYD1_k127_10719345_21 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000001136 76.0
BYD1_k127_10719345_22 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000008022 70.0
BYD1_k127_10719345_3 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000001139 239.0
BYD1_k127_10719345_4 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000002168 235.0
BYD1_k127_10719345_5 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000001255 218.0
BYD1_k127_10719345_6 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0000027,GO:0000049,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000001311 214.0
BYD1_k127_10719345_7 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000001192 201.0
BYD1_k127_10719345_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0008150,GO:0015934,GO:0016020,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071944,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000002866 189.0
BYD1_k127_10719345_9 Forms part of the polypeptide exit tunnel K02926,K16193 GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016020,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030312,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000002891 184.0
BYD1_k127_10731733_0 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000001271 223.0
BYD1_k127_10732767_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1349.0
BYD1_k127_10732767_1 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000002568 118.0
BYD1_k127_10757224_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000001611 167.0
BYD1_k127_10763886_0 s1 p1 nuclease - - - 0.000000000000000000000000000000000000000000002038 176.0
BYD1_k127_10763886_1 nucleotide catabolic process - - - 0.000000000000000000000000000000106 139.0
BYD1_k127_10763886_2 HDOD domain - - - 0.0000000000000000000000000001172 126.0
BYD1_k127_10763886_3 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin K01113,K14645,K17713 - 3.1.3.1 0.000000000000000000001851 102.0
BYD1_k127_10763886_4 Histidine kinase K07716 - 2.7.13.3 0.00000000000000000006414 104.0
BYD1_k127_10763886_5 Histidine kinase K02482 - 2.7.13.3 0.00000001465 67.0
BYD1_k127_10794058_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 518.0
BYD1_k127_10794058_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007152 255.0
BYD1_k127_10794058_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000007728 205.0
BYD1_k127_10794058_3 GIY-YIG catalytic domain K07461 - - 0.0000000003749 62.0
BYD1_k127_10796394_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 3.507e-213 698.0
BYD1_k127_10796394_1 CO dehydrogenase flavoprotein C-terminal domain K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000006962 227.0
BYD1_k127_10796394_2 carbon monoxide dehydrogenase K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000002161 173.0
BYD1_k127_1080103_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 8.244e-248 776.0
BYD1_k127_1080103_1 Polysulphide reductase K00185 - - 4.782e-204 645.0
BYD1_k127_1080103_10 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000000000749 93.0
BYD1_k127_1080103_2 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 376.0
BYD1_k127_1080103_3 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 371.0
BYD1_k127_1080103_4 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003794 346.0
BYD1_k127_1080103_5 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 291.0
BYD1_k127_1080103_6 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001173 286.0
BYD1_k127_1080103_7 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000000000000000001203 226.0
BYD1_k127_1080103_8 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000003965 139.0
BYD1_k127_1080103_9 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000009828 115.0
BYD1_k127_10805527_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 466.0
BYD1_k127_10805527_1 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000001796 195.0
BYD1_k127_10805527_2 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000008172 113.0
BYD1_k127_10805762_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 340.0
BYD1_k127_10805762_1 Ami_3 K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.0004631 45.0
BYD1_k127_10812819_0 glutamate-tRNA ligase activity K01885,K09698 - 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 405.0
BYD1_k127_10812819_1 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.00000000000000000000000000000000004077 154.0
BYD1_k127_10812819_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides - - - 0.00000000000000000000002493 109.0
BYD1_k127_10812819_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000005916 116.0
BYD1_k127_10812819_4 antisigma factor binding K04749 - - 0.00000000000000002055 86.0
BYD1_k127_10812819_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000001873 64.0
BYD1_k127_10823548_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000706 602.0
BYD1_k127_10823548_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 369.0
BYD1_k127_10823548_10 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000001119 165.0
BYD1_k127_10823548_11 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000003934 148.0
BYD1_k127_10823548_12 Protein conserved in bacteria K20444 - - 0.0000000000000000000000000000000007808 145.0
BYD1_k127_10823548_13 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000003519 141.0
BYD1_k127_10823548_14 Could be involved in septation K06412 - - 0.0000000000000000000000003237 114.0
BYD1_k127_10823548_15 Small Multidrug Resistance protein - - - 0.00000000000000004534 96.0
BYD1_k127_10823548_16 lipolytic protein G-D-S-L family - - - 0.000002014 60.0
BYD1_k127_10823548_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 342.0
BYD1_k127_10823548_3 Bacterial sugar transferase K03606,K20997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 321.0
BYD1_k127_10823548_4 PFAM Glycosyl transferase, group 1 K12994 - 2.4.1.349 0.0000000000000000000000000000000000000000000000000000000000000000000000000001429 270.0
BYD1_k127_10823548_5 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001729 261.0
BYD1_k127_10823548_6 ABC transporter K09689,K09691 - 3.6.3.38 0.00000000000000000000000000000000000000000000000000000000000000000001038 249.0
BYD1_k127_10823548_7 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000006347 203.0
BYD1_k127_10823548_8 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000005847 181.0
BYD1_k127_10823548_9 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000312 179.0
BYD1_k127_10824027_0 Polysaccharide export protein K01991,K20988 - - 0.0000000000000000000000003975 118.0
BYD1_k127_10824027_1 G-rich domain on putative tyrosine kinase K16554 - - 0.00001854 55.0
BYD1_k127_10844887_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 310.0
BYD1_k127_10844887_1 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000003616 97.0
BYD1_k127_10844887_2 - - - - 0.0000000000001326 84.0
BYD1_k127_10844887_3 Bacterial Ig-like domain (group 3) - - - 0.00001669 57.0
BYD1_k127_10867751_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042,K17468 - 2.9.1.1,4.3.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 402.0
BYD1_k127_10867751_1 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007775 358.0
BYD1_k127_10867751_10 Predicted membrane protein (DUF2232) - - - 0.000000022 66.0
BYD1_k127_10867751_11 protein trimerization K02453 - - 0.00005097 56.0
BYD1_k127_10867751_2 Bifunctional nuclease K08999 - - 0.00000000000000000000000000000000000002956 151.0
BYD1_k127_10867751_3 single-stranded DNA binding K03111 - - 0.000000000000000000000000000000001235 136.0
BYD1_k127_10867751_4 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000255 120.0
BYD1_k127_10867751_5 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000001827 99.0
BYD1_k127_10867751_6 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000001399 92.0
BYD1_k127_10867751_7 Sporulation related domain - - - 0.00000000005356 76.0
BYD1_k127_10867751_8 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.0000000001388 74.0
BYD1_k127_10867751_9 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000001171 70.0
BYD1_k127_10877626_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 8.579e-204 642.0
BYD1_k127_10877626_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 371.0
BYD1_k127_10877626_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 302.0
BYD1_k127_10877626_3 TOBE domain K02017,K02018 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003671 281.0
BYD1_k127_10877626_4 Binding-protein-dependent transport system inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000001398 240.0
BYD1_k127_10877787_0 Glyoxalase-like domain - - - 0.00000000000000000001014 95.0
BYD1_k127_10882094_0 - K19341 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000204 268.0
BYD1_k127_10882094_1 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000002354 222.0
BYD1_k127_10882094_2 Domain present in carbohydrate binding proteins and sugar hydrolses K07218 - - 0.00000000000000000000000000008282 121.0
BYD1_k127_10882094_3 NosL K19342 - - 0.0000000000000003643 91.0
BYD1_k127_10882094_4 Belongs to the pyruvate kinase family K00873 GO:0001871,GO:0003674,GO:0003824,GO:0004743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006116,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019674,GO:0019693,GO:0019752,GO:0030246,GO:0030247,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:2001065 2.7.1.40 0.00000000003128 64.0
BYD1_k127_10948042_0 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000006095 229.0
BYD1_k127_10948042_1 MFS_1 like family K08161 - - 0.00000000000000000000000000000000000000000000000000000000000000111 234.0
BYD1_k127_10948042_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000002308 181.0
BYD1_k127_10948042_3 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000008068 124.0
BYD1_k127_10954164_0 ABC transporter K02021,K06147,K06148,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 507.0
BYD1_k127_10954164_1 Glycosyl transferase, family 9 K02843 - - 0.000000000000000000000000000000000248 153.0
BYD1_k127_10954164_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000001033 130.0
BYD1_k127_10954164_3 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000007164 87.0
BYD1_k127_10954164_4 ADP-heptose LPS heptosyltransferase - GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.00006094 49.0
BYD1_k127_10965036_0 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000001259 141.0
BYD1_k127_10965036_1 PhoQ Sensor - - - 0.000000000000000000000000000000001581 148.0
BYD1_k127_10965036_2 aminopeptidase N - - - 0.0000000000000000001302 101.0
BYD1_k127_10965036_3 type II secretion system protein K12511 - - 0.00002147 56.0
BYD1_k127_10968746_0 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 315.0
BYD1_k127_10968746_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000001694 67.0
BYD1_k127_10968746_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0008666 51.0
BYD1_k127_10969255_0 4Fe-4S single cluster domain K06871 - - 0.000000000000000000000000006167 124.0
BYD1_k127_10969255_1 IgA Peptidase M64 - - - 0.000000008233 68.0
BYD1_k127_10984443_0 form. Deacetylates the N-terminal lysine residue of Alba, the major archaeal chromatin protein and that, in turn, increases Alba's DNA binding affinity, thereby repressing transcription K12410 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001481 261.0
BYD1_k127_10984443_1 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000001408 162.0
BYD1_k127_10984443_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000007447 153.0
BYD1_k127_11011358_0 peptidyl-lysine modification to peptidyl-hypusine - - - 0.00000000000000000000000000000000000000000000000000000000001578 212.0
BYD1_k127_11011358_1 SMART AAA ATPase K02450 - - 0.00000000000000000000000000000000000000000000000000000000003698 221.0
BYD1_k127_11011358_2 polysaccharide export K01991 - - 0.00000000000000000004069 102.0
BYD1_k127_11011358_3 protein involved in exopolysaccharide biosynthesis K16554,K16692 - - 0.000000000000000002811 99.0
BYD1_k127_11028526_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 342.0
BYD1_k127_11028526_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000141 263.0
BYD1_k127_11028526_2 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000004932 174.0
BYD1_k127_11028526_3 PFAM ABC transporter related K06158 - - 0.000000000000000000009533 97.0
BYD1_k127_11055656_0 ABC-type Mn2 Zn2 transport K11705,K11708,K19976 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 372.0
BYD1_k127_11055656_1 Manganese ABC transporter ATP-binding protein K02074,K09820,K11710,K19973 - 3.6.3.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006965 361.0
BYD1_k127_11055656_2 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 351.0
BYD1_k127_11055656_3 ABC transporter K11709,K19976 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 349.0
BYD1_k127_11055656_4 Belongs to the bacterial solute-binding protein 9 family K11707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000176 267.0
BYD1_k127_11055656_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000004677 170.0
BYD1_k127_11055656_6 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000002043 160.0
BYD1_k127_11055656_7 - - - - 0.0000000000000000000000003468 120.0
BYD1_k127_11058940_0 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 509.0
BYD1_k127_11058940_1 Lanthionine synthetase C-like protein K20484 - - 0.0000000000000000000000000000000000000004616 155.0
BYD1_k127_11101706_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 8.052e-279 873.0
BYD1_k127_11121591_0 involved in cell wall biogenesis - - - 0.000000000000000000000000000000000000000000000000313 183.0
BYD1_k127_11121591_1 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.0000000000000000000000000000000000000006607 162.0
BYD1_k127_11179140_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000002095 222.0
BYD1_k127_11179140_1 - - - - 0.000000000000000000000002794 109.0
BYD1_k127_11179140_2 - - - - 0.000000000000000002533 86.0
BYD1_k127_11179140_3 Parallel beta-helix repeats - - - 0.00000001145 67.0
BYD1_k127_11179140_4 Glycosyl transferases group 1 - - - 0.0000003557 59.0
BYD1_k127_11210354_0 amino acid activation for nonribosomal peptide biosynthetic process K17713,K20952 - - 0.00000000000000000000000000000000000000000000000000001865 214.0
BYD1_k127_11210354_1 Allomyces macrogynus ATCC 38327 chlamydial polymorphic outer membrane protein - - - 0.000666 50.0
BYD1_k127_11276799_0 RNA polymerase recycling family C-terminal K03580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007846 290.0
BYD1_k127_11276799_1 - - - - 0.0000000000000000001714 94.0
BYD1_k127_11305827_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01738,K12339,K21949 - 2.5.1.140,2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003555 283.0
BYD1_k127_11305827_1 Aldo keto reductase - - - 0.00000000000000000000000000000000000000000000002653 184.0
BYD1_k127_11305827_2 signal peptide processing K03100 - 3.4.21.89 0.0000000000000000000000001756 110.0
BYD1_k127_11308803_0 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006931 557.0
BYD1_k127_11308803_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000001817 242.0
BYD1_k127_11320486_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000001816 238.0
BYD1_k127_11320486_1 tetratricopeptide repeat - - - 0.000001927 60.0
BYD1_k127_11355790_0 Belongs to the sigma-70 factor family K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009282 269.0
BYD1_k127_11355790_1 Psort location CytoplasmicMembrane, score 10.00 K02556 - - 0.0000000000000000000000000000000000000000000000000000005627 199.0
BYD1_k127_11355790_2 flagellar motor switch protein FliM K02416 - - 0.000000000000000000000000000000000000000000000000000003093 204.0
BYD1_k127_11355790_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000001741 197.0
BYD1_k127_11355790_4 PFAM OmpA MotB domain protein K02557 - - 0.00000000000000000000000000000001448 142.0
BYD1_k127_11355790_5 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.00000000000107 75.0
BYD1_k127_11355790_6 Type III flagellar switch regulator (C-ring) FliN C-term - - - 0.000000004275 66.0
BYD1_k127_11365433_0 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000002549 248.0
BYD1_k127_11365433_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000006394 174.0
BYD1_k127_11396592_0 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 479.0
BYD1_k127_11396592_1 Polysaccharide export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 467.0
BYD1_k127_11396592_2 Chromatin associated protein KTI12 - - - 0.000000000000000000000000000000000000000000000000000000008545 214.0
BYD1_k127_11442_0 ABC transporter transmembrane region K18890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 468.0
BYD1_k127_11442_1 ABC transporter, transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000146 253.0
BYD1_k127_11446902_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 327.0
BYD1_k127_11446902_1 lysyltransferase activity - - - 0.0000000000000005791 91.0
BYD1_k127_11461851_0 Type III secretion system lipoprotein chaperone (YscW) - - - 0.000000000000000000000000000000000000000000000000001927 193.0
BYD1_k127_11461851_1 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000007657 178.0
BYD1_k127_11461851_2 ECF sigma factor - - - 0.0000000000000000000000000000000000008692 145.0
BYD1_k127_11461851_3 Concanavalin A-like lectin/glucanases superfamily - - - 0.00000000000000005141 93.0
BYD1_k127_11461851_4 PFAM Tetratricopeptide repeat - - - 0.0000000001734 68.0
BYD1_k127_11483572_0 Arylsulfatase a K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 381.0
BYD1_k127_11483572_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000162 93.0
BYD1_k127_11483572_2 AntiSigma factor - - - 0.00003063 56.0
BYD1_k127_11500226_0 Sodium/hydrogen exchanger family K03455 - - 6.546e-225 717.0
BYD1_k127_11500226_1 COG3119 Arylsulfatase A K01138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 400.0
BYD1_k127_11500226_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000938 203.0
BYD1_k127_11500226_3 - - - - 0.00000000000000000000000000000000003646 139.0
BYD1_k127_11500226_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000002365 136.0
BYD1_k127_11500226_6 30S ribosomal protein Thx K19033 - - 0.00000817 51.0
BYD1_k127_11527224_0 transferase activity, transferring glycosyl groups K00713,K06338 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006382 476.0
BYD1_k127_11527224_1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 396.0
BYD1_k127_11527224_2 DoxX K15977 - - 0.00000003778 56.0
BYD1_k127_11533480_0 cellulase activity - - - 7.082e-224 721.0
BYD1_k127_11533480_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 317.0
BYD1_k127_11543138_0 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008614 475.0
BYD1_k127_11543138_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001989 229.0
BYD1_k127_11543138_2 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000005978 63.0
BYD1_k127_11546984_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 437.0
BYD1_k127_11546984_1 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 320.0
BYD1_k127_11546984_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000001523 212.0
BYD1_k127_11546984_3 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000001274 213.0
BYD1_k127_11546984_4 extracellular matrix structural constituent - - - 0.00000004255 55.0
BYD1_k127_11574705_0 Tetratricopeptide repeat - - - 0.00000000002477 70.0
BYD1_k127_11580257_0 PFAM peptidase M16 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005046 311.0
BYD1_k127_11580257_1 Polysaccharide biosynthesis protein - - - 0.00000000002929 75.0
BYD1_k127_11580257_2 Peptidase M16 inactive domain - - - 0.00001535 53.0
BYD1_k127_11635205_0 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604,K11175 - 2.1.2.2,2.1.2.9 0.000000000000000000000000000000000000000000001909 177.0
BYD1_k127_11635205_1 cellulose binding K00505 - 1.14.18.1 0.000000000000002618 85.0
BYD1_k127_11656137_0 NIF3 (NGG1p interacting factor 3) K22391 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0042802,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050896 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000003231 258.0
BYD1_k127_11656137_1 glucosamine-1-phosphate N-acetyltransferase activity K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000001628 256.0
BYD1_k127_11656137_2 Protein of unknown function (DUF1460) - - - 0.00000000000000000004451 101.0
BYD1_k127_11656137_3 LVIVD repeat - - - 0.000000000000006327 86.0
BYD1_k127_11656137_4 FlgD Ig-like domain - - - 0.00000000000000679 84.0
BYD1_k127_11656137_5 Domain of unknown function (DUF5107) - - - 0.00002871 54.0
BYD1_k127_11664537_0 Glycosyl transferase family 2 K00721,K00786 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000004694 258.0
BYD1_k127_11664537_1 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000002953 159.0
BYD1_k127_11664537_2 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000001971 86.0
BYD1_k127_11664537_3 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.00000000000006422 83.0
BYD1_k127_11664537_4 Sulfatase - - - 0.0000000001465 71.0
BYD1_k127_1170521_0 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 409.0
BYD1_k127_1170521_1 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 411.0
BYD1_k127_1170521_2 Citrate transporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009648 297.0
BYD1_k127_1170521_3 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001544 281.0
BYD1_k127_1170521_4 Dienelactone hydrolase family K07020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003009 267.0
BYD1_k127_1170521_5 Uncharacterized conserved protein (DUF2277) - - - 0.00000000000000000000000000000000009428 135.0
BYD1_k127_1170521_6 Universal stress protein - - - 0.000000000000000472 83.0
BYD1_k127_11705859_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 539.0
BYD1_k127_11705859_1 B3/4 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008503 250.0
BYD1_k127_11705859_3 - - - - 0.000000000003232 69.0
BYD1_k127_11705859_4 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.00000000104 65.0
BYD1_k127_11706233_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 338.0
BYD1_k127_11706233_1 cellulase activity K01195 - 3.2.1.31 0.00004962 53.0
BYD1_k127_11723016_0 E-Z type HEAT repeats - - - 0.0009685 48.0
BYD1_k127_11750756_0 Aconitase family (aconitate hydratase) K01703,K01704,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 514.0
BYD1_k127_11750756_1 Highly conserved protein containing a thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000009453 204.0
BYD1_k127_11750756_2 3-isopropylmalate dehydratase activity K01703,K01704,K01705 - 4.2.1.33,4.2.1.35,4.2.1.36 0.0000000000000000000000000000000003306 136.0
BYD1_k127_11750756_3 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499 - 1.14.15.7 0.000000000004625 66.0
BYD1_k127_11801645_0 PFAM peptidase - - - 0.0000000000000001217 93.0
BYD1_k127_11801645_1 TIGRFAM Outer membrane protein K13735,K20276 - - 0.0000000009266 71.0
BYD1_k127_11811255_0 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001501 276.0
BYD1_k127_11811255_1 ABC transporter K01990,K09697 - 3.6.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000002493 277.0
BYD1_k127_11811255_2 COG1668 ABC-type Na efflux pump, permease component K01992,K09696 - - 0.000000000000000000000000001141 129.0
BYD1_k127_11811255_3 FecR protein - - - 0.0007219 50.0
BYD1_k127_11829695_0 Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH K22136 - - 0.000000000000000000000000000000000000000000000000000009634 213.0
BYD1_k127_11829695_1 SAM-dependent methyltransferase - - - 0.000000000000000000000000000000000004904 145.0
BYD1_k127_11829695_2 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000001605 141.0
BYD1_k127_11830374_0 CHAT domain - - - 0.000000000000000000000000000000000000000000004038 189.0
BYD1_k127_11830374_1 Serine threonine protein kinase - - - 0.000000000000000001399 92.0
BYD1_k127_11830374_2 Tetratricopeptide repeat - - - 0.00000009346 66.0
BYD1_k127_11830374_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000005602 56.0
BYD1_k127_11856737_0 General secretory system II protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 586.0
BYD1_k127_11856737_1 Type II secretion system (T2SS), protein F K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 460.0
BYD1_k127_11856737_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 429.0
BYD1_k127_11856737_3 Competence protein ComEA K02237 - - 0.00000000000003146 81.0
BYD1_k127_11856737_4 Sensor histidine kinase PilS, PAS domain-containing K02668,K07709 - 2.7.13.3 0.0000004685 59.0
BYD1_k127_11946346_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 333.0
BYD1_k127_11946346_1 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004428 271.0
BYD1_k127_11946346_2 - K20326 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006667 255.0
BYD1_k127_11946346_3 denitrification pathway - - - 0.000000000000000000000000000000000000000000000000000000000000000000001014 254.0
BYD1_k127_11946346_4 Rhodanese Homology Domain K01011,K21028 - 2.8.1.1,2.8.1.11,2.8.1.2 0.0000000000000000000000000000000000000000000008889 178.0
BYD1_k127_11979760_0 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000003691 228.0
BYD1_k127_11979760_1 arylsulfatase A - - - 0.00000000000000000000000000000000000000000000000008427 194.0
BYD1_k127_11985344_0 Lanthionine synthetase C-like protein K20484 - - 0.00000000000000000000000000000000000000000000000000000000000000777 231.0
BYD1_k127_12014247_0 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 349.0
BYD1_k127_12014247_1 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000001201 179.0
BYD1_k127_12014247_2 Maf-like protein K06287 GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0022402,GO:0022607,GO:0030428,GO:0032506,GO:0044085,GO:0044464,GO:0051301,GO:0061640,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.00000000000000000000000000000000000000000001035 177.0
BYD1_k127_12014422_0 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005972 383.0
BYD1_k127_12014422_1 methyltransferase - - - 0.00000000000000001282 91.0
BYD1_k127_12021136_0 Nitrous oxide reductase K00376 - 1.7.2.4 2.432e-301 944.0
BYD1_k127_12021136_1 alginic acid biosynthetic process K07218 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 400.0
BYD1_k127_12021136_2 lipoprotein involved in nitrous oxide reduction K19342 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007143 282.0
BYD1_k127_12021136_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 GO:0000096,GO:0000097,GO:0000098,GO:0003674,GO:0003824,GO:0004122,GO:0004124,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006555,GO:0006563,GO:0006790,GO:0006807,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008284,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009087,GO:0009987,GO:0016043,GO:0016053,GO:0016054,GO:0016740,GO:0016765,GO:0016829,GO:0016835,GO:0016836,GO:0016846,GO:0019344,GO:0019752,GO:0019842,GO:0022607,GO:0030170,GO:0032991,GO:0032993,GO:0036094,GO:0042127,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043388,GO:0043436,GO:0043933,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046395,GO:0046983,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0051098,GO:0051099,GO:0051101,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051291,GO:0065003,GO:0065007,GO:0065009,GO:0070279,GO:0071704,GO:0071840,GO:0080146,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1904796,GO:1904798,GO:2000677,GO:2000679 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000001448 255.0
BYD1_k127_12021136_4 2 iron, 2 sulfur cluster binding - - - 0.00000000000000000000000001226 115.0
BYD1_k127_12021136_5 3-demethylubiquinone-9 3-O-methyltransferase activity K16328 - 2.7.1.83 0.000000000000000003257 85.0
BYD1_k127_12053042_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004175 380.0
BYD1_k127_12053042_1 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000407 246.0
BYD1_k127_12078135_0 Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 379.0
BYD1_k127_12078135_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004234 262.0
BYD1_k127_12078135_2 Evidence 5 No homology to any previously reported sequences K20952 - - 0.0000000000704 65.0
BYD1_k127_1207855_0 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 295.0
BYD1_k127_1207855_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006777 291.0
BYD1_k127_1207855_2 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000001765 243.0
BYD1_k127_1207855_3 Multidrug transporter - - - 0.00000000000000000000000000000000000000000000000000759 194.0
BYD1_k127_1207855_4 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.0000000005763 70.0
BYD1_k127_12095798_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 422.0
BYD1_k127_12095798_1 - - - - 0.000000000005028 68.0
BYD1_k127_12185395_0 Peptidase family M1 domain K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 450.0
BYD1_k127_12185395_1 ATP-dependent helicase hrq1 K06877 GO:0000166,GO:0000217,GO:0000405,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0031974,GO:0031981,GO:0032392,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034644,GO:0035639,GO:0035861,GO:0036094,GO:0036297,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070013,GO:0070035,GO:0070914,GO:0071103,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0090304,GO:0090734,GO:0097159,GO:0097367,GO:0104004,GO:0140097,GO:0140098,GO:1901255,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000004133 124.0
BYD1_k127_12185395_2 COG0500 SAM-dependent methyltransferases - - - 0.00000000000000000000007317 107.0
BYD1_k127_12185395_3 Belongs to the peptidase S8 family K01337,K01387,K05994,K08604,K14645,K20276 - 3.4.11.10,3.4.21.50,3.4.24.25,3.4.24.3 0.00006293 55.0
BYD1_k127_12185395_4 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.0001456 54.0
BYD1_k127_12188680_0 Glycosyltransferase 36 associated - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 527.0
BYD1_k127_12188680_1 cellulose binding K00505 - 1.14.18.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009918 352.0
BYD1_k127_12188680_2 helix_turn _helix lactose operon repressor K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 291.0
BYD1_k127_12202169_0 Pfam:T6SS_VipB K11896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001895 333.0
BYD1_k127_12202169_1 Protein of avirulence locus involved in temperature-dependent protein secretion K03217,K11898 - - 0.0000000000000000000000000000000000000000003128 168.0
BYD1_k127_12202169_2 TIGRFAM Type VI secretion system, lysozyme-related K11897 - - 0.00000000000000002859 93.0
BYD1_k127_12204168_0 DNA polymerase K02337,K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 497.0
BYD1_k127_12204168_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000006449 154.0
BYD1_k127_1226967_0 Protein of unknown function, DUF255 K06888 - - 4.763e-211 683.0
BYD1_k127_1226967_1 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 307.0
BYD1_k127_1226967_2 - K01992 - - 0.00000000000000000000000000000000000000000000000000000000001101 214.0
BYD1_k127_1226967_3 peptide catabolic process - - - 0.000000000000000000000000000000000000008883 158.0
BYD1_k127_1252420_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 562.0
BYD1_k127_1252420_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 527.0
BYD1_k127_1252420_10 - - - - 0.0000000000000000000000000000000004779 138.0
BYD1_k127_1252420_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000001985 127.0
BYD1_k127_1252420_12 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000205 116.0
BYD1_k127_1252420_13 Putative member of DMT superfamily (DUF486) - - - 0.000000000009625 64.0
BYD1_k127_1252420_2 PFAM Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001439 273.0
BYD1_k127_1252420_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001504 274.0
BYD1_k127_1252420_4 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006124 228.0
BYD1_k127_1252420_5 Activator of Hsp90 ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000001996 231.0
BYD1_k127_1252420_6 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000001027 217.0
BYD1_k127_1252420_7 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000000000000001173 209.0
BYD1_k127_1252420_8 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000001115 177.0
BYD1_k127_1252420_9 PFAM regulatory protein, ArsR - - - 0.00000000000000000000000000000000000000000006813 161.0
BYD1_k127_126276_0 C-terminus of AA_permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 343.0
BYD1_k127_126276_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000001486 211.0
BYD1_k127_1269902_0 Belongs to the RtcB family K14415 - 6.5.1.3 8.082e-215 678.0
BYD1_k127_1269902_1 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007901 402.0
BYD1_k127_1269902_10 DNA excision K02806 - - 0.00006949 48.0
BYD1_k127_1269902_2 Sodium/calcium exchanger protein K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 385.0
BYD1_k127_1269902_3 TIGRFAM zinc-binding alcohol dehydrogenase family protein K13953 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006803 313.0
BYD1_k127_1269902_4 HDOD domain - - - 0.000000000000000000000000000000000000000000000000002684 198.0
BYD1_k127_1269902_5 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.0000000000000000000000000000000000000000001279 164.0
BYD1_k127_1269902_6 GAF domain - - - 0.00000000000000000000000000000000000000005184 173.0
BYD1_k127_1269902_7 Metal-dependent hydrolase HDOD - - - 0.00000000000000000000000000001203 137.0
BYD1_k127_1269902_8 - K07283 - - 0.0000000000003379 82.0
BYD1_k127_1269902_9 Lamin Tail Domain - - - 0.00000618 58.0
BYD1_k127_1274418_0 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 442.0
BYD1_k127_1274418_1 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 433.0
BYD1_k127_1274418_2 Carbamoyltransferase C-terminus K00612 - - 0.0000000000000000000000005813 120.0
BYD1_k127_1274418_3 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 0.0000000000000001149 91.0
BYD1_k127_1274418_4 Serine aminopeptidase, S33 - - - 0.000006862 57.0
BYD1_k127_1288003_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02667,K07713,K07714,K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 473.0
BYD1_k127_1288003_1 ABC-type multidrug transport system ATPase component K01990 - - 0.00000000000000000000000000000000000000000000000000000001439 203.0
BYD1_k127_1288003_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000006061 198.0
BYD1_k127_1288003_3 Pfam:N_methyl_2 - - - 0.0000000001658 68.0
BYD1_k127_1288003_4 Prokaryotic N-terminal methylation motif K02650 GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - 0.0000003333 59.0
BYD1_k127_1295314_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.488e-226 711.0
BYD1_k127_1295314_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000738 258.0
BYD1_k127_1295314_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000005683 241.0
BYD1_k127_1295314_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000003135 164.0
BYD1_k127_1295314_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000005935 119.0
BYD1_k127_1295314_5 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000001885 97.0
BYD1_k127_1295314_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000001365 90.0
BYD1_k127_1295314_7 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00001955 52.0
BYD1_k127_1300214_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006438 442.0
BYD1_k127_1300214_1 ArgK protein K07588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000111 280.0
BYD1_k127_1322200_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000007476 190.0
BYD1_k127_1322200_1 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000000000000000000002364 184.0
BYD1_k127_1322200_2 cellulose binding K00505 - 1.14.18.1 0.000000002155 71.0
BYD1_k127_1322200_3 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.000000004061 68.0
BYD1_k127_1329759_0 NADH:flavin oxidoreductase / NADH oxidase family K09461 - 1.14.13.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007818 334.0
BYD1_k127_1329759_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003255 331.0
BYD1_k127_1329759_2 enoyl-CoA hydratase - - - 0.0000000000000000000000000000000000000000001814 162.0
BYD1_k127_1342637_0 extracellular matrix structural constituent - - - 0.00006073 57.0
BYD1_k127_1352820_0 COGs COG1748 Saccharopine dehydrogenase and related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001871 269.0
BYD1_k127_1352820_1 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.000000000000000000000000000000000001973 144.0
BYD1_k127_1365068_0 Bifunctional protein - - - 0.00000000000000000000000000000000000000000000000000000000000006551 231.0
BYD1_k127_1365068_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000000000000002778 207.0
BYD1_k127_1365068_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.00000000000000000000000000000000000002225 152.0
BYD1_k127_1365068_3 transferase activity, transferring glycosyl groups K00754 - - 0.0000000000007626 74.0
BYD1_k127_1373497_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000005851 150.0
BYD1_k127_1373497_1 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.000000007603 66.0
BYD1_k127_1373497_2 Glycosyl transferases group 1 - - - 0.00004392 51.0
BYD1_k127_1373497_3 Helix-turn-helix domain - - - 0.0000595 53.0
BYD1_k127_1392349_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 622.0
BYD1_k127_1392349_1 Belongs to the bacterial plant glucose-1-phosphate adenylyltransferase family K00975 - 2.7.7.27 0.000000000000000000006194 94.0
BYD1_k127_1392349_2 FeoA K04758 - - 0.000000000000004682 79.0
BYD1_k127_1488568_0 Ami_3 K01448 GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 3.5.1.28 0.00001049 56.0
BYD1_k127_1488568_1 Tetratricopeptide repeat - - - 0.0000113 59.0
BYD1_k127_1488568_2 Protein conserved in bacteria - - - 0.00001458 51.0
BYD1_k127_1495127_0 translation release factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 330.0
BYD1_k127_1495127_1 - - - - 0.0000000000000000000000000000000000000000000000000002979 199.0
BYD1_k127_1495127_2 - - - - 0.0000000000000000000001574 103.0
BYD1_k127_1495127_3 Lysin motif - - - 0.000000000000000002126 88.0
BYD1_k127_151098_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 6.16e-304 949.0
BYD1_k127_151098_1 COG0346 Lactoylglutathione lyase and related lyases K15975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009826 253.0
BYD1_k127_151098_2 PFAM Peptidase family M28 - - - 0.000000001917 70.0
BYD1_k127_1549118_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 314.0
BYD1_k127_1549118_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 307.0
BYD1_k127_1549118_2 Iron-sulfur cluster-binding domain K22227 - - 0.0000000000000000000000000000000000000001083 160.0
BYD1_k127_1549118_3 metal-dependent phosphohydrolase HD region - - - 0.000000000000001346 89.0
BYD1_k127_1563762_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 290.0
BYD1_k127_1563762_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003591 281.0
BYD1_k127_1563762_2 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 GO:0005575,GO:0005623,GO:0009986,GO:0044464 1.4.1.4 0.0000000001231 61.0
BYD1_k127_1563985_0 Protein of unknown function (DUF3604) - - - 0.0000000000001308 82.0
BYD1_k127_1563985_1 Tetratricopeptide repeat - - - 0.000000391 63.0
BYD1_k127_1572534_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 462.0
BYD1_k127_1572534_1 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 297.0
BYD1_k127_1572534_2 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.0000000000000000000000000000000000000000000001016 179.0
BYD1_k127_1572534_3 ABC 3 transport family K02075 - - 0.0000000000000000000000000000000000000000000001241 179.0
BYD1_k127_1572534_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000003766 170.0
BYD1_k127_1572534_5 - - - - 0.000000000000423 82.0
BYD1_k127_1572534_6 phosphate-selective porin O and P - - - 0.0000000000009492 79.0
BYD1_k127_1572534_7 Tetratricopeptide TPR_2 repeat protein - - - 0.0000004488 63.0
BYD1_k127_1573891_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 476.0
BYD1_k127_1573891_1 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002263 254.0
BYD1_k127_1573891_2 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000001911 237.0
BYD1_k127_1573891_3 PFAM phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.000000000000000000000000000001225 128.0
BYD1_k127_1573891_4 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.00000000000000000000000000001572 128.0
BYD1_k127_1573891_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000001005 123.0
BYD1_k127_1573891_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000000000006018 117.0
BYD1_k127_1573891_7 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.000000000000000000000004082 104.0
BYD1_k127_1573891_8 RecX family K03565 - - 0.0000000000000939 79.0
BYD1_k127_1573891_9 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 2.7.7.7 0.000002527 59.0
BYD1_k127_1595383_0 Surface antigen K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 309.0
BYD1_k127_1599523_0 phosphatidate phosphatase activity K01096,K19302 - 3.1.3.27,3.1.3.4,3.1.3.81,3.6.1.27 0.000000000000000000003758 103.0
BYD1_k127_1599523_1 AraC-like ligand binding domain - - - 0.000000001574 70.0
BYD1_k127_1607195_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.773e-226 718.0
BYD1_k127_1607195_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 424.0
BYD1_k127_1607195_10 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000001064 99.0
BYD1_k127_1607195_11 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.0000000000000007805 87.0
BYD1_k127_1607195_12 exodeoxyribonuclease VII activity K03602 - 3.1.11.6 0.00000000000951 68.0
BYD1_k127_1607195_13 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000009285 64.0
BYD1_k127_1607195_14 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000002176 59.0
BYD1_k127_1607195_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005369 364.0
BYD1_k127_1607195_3 PFAM Metallophosphoesterase K09769 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 324.0
BYD1_k127_1607195_4 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009327 309.0
BYD1_k127_1607195_5 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 320.0
BYD1_k127_1607195_6 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 291.0
BYD1_k127_1607195_7 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000001137 254.0
BYD1_k127_1607195_8 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.0000000000000000000000000000000000000007817 158.0
BYD1_k127_1607195_9 PFAM Acid phosphatase vanadium-dependent haloperoxidase related K09775 - - 0.000000000000000000000000000000002563 136.0
BYD1_k127_1661650_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 395.0
BYD1_k127_1661650_1 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006322 324.0
BYD1_k127_1661650_10 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.00000000000000000000000000000000000000000002399 162.0
BYD1_k127_1661650_11 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000001145 136.0
BYD1_k127_1661650_12 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000008485 97.0
BYD1_k127_1661650_13 Methyltransferase - - - 0.0000000000000000001035 101.0
BYD1_k127_1661650_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004433 280.0
BYD1_k127_1661650_3 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006953 276.0
BYD1_k127_1661650_4 SMART PDZ DHR GLGF domain protein K11749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004159 263.0
BYD1_k127_1661650_5 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001706 251.0
BYD1_k127_1661650_6 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000001497 205.0
BYD1_k127_1661650_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000001688 177.0
BYD1_k127_1661650_8 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0019538,GO:0022625,GO:0022626,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000003554 178.0
BYD1_k127_1661650_9 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000004187 177.0
BYD1_k127_1683521_0 TIGRFAM FemAB-related protein, PEP-CTERM system-associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 305.0
BYD1_k127_1683521_1 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000007011 179.0
BYD1_k127_1683521_2 methyltransferase - - - 0.000000000000000000000000000000000000000000000009874 180.0
BYD1_k127_1683521_3 transferase activity, transferring glycosyl groups K13003 - - 0.00000402 59.0
BYD1_k127_1693293_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000653 387.0
BYD1_k127_1693293_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000036 303.0
BYD1_k127_1693293_2 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004991 278.0
BYD1_k127_1693293_3 rRNA binding K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000322 69.0
BYD1_k127_1693293_4 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000003463 54.0
BYD1_k127_1733675_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 515.0
BYD1_k127_1733675_1 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000007058 209.0
BYD1_k127_1733675_2 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000001475 189.0
BYD1_k127_1733675_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000006711 124.0
BYD1_k127_1733675_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000005438 91.0
BYD1_k127_174374_0 PFAM glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002712 265.0
BYD1_k127_174374_1 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008125 253.0
BYD1_k127_174374_2 CobQ CobB MinD ParA nucleotide binding domain K16554,K16692 - - 0.00000000000000000000000000000000000000000000000000000000003495 222.0
BYD1_k127_174374_3 PFAM O-antigen polymerase - - - 0.000000000000000000000000000000000007349 155.0
BYD1_k127_1753028_0 PFAM Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 502.0
BYD1_k127_1753028_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431 - 3.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 436.0
BYD1_k127_1753028_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 400.0
BYD1_k127_1753028_3 Amino acid kinase family K00926 - 2.7.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 339.0
BYD1_k127_1753028_4 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.000000000000000000000000000000001875 139.0
BYD1_k127_1753028_5 serine-type endopeptidase activity - - - 0.000000000000000000000002908 113.0
BYD1_k127_1753028_6 AAA domain - - - 0.0005654 52.0
BYD1_k127_1766341_0 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009667 253.0
BYD1_k127_1766341_1 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000000003294 214.0
BYD1_k127_1766341_2 NMT1-like family K02051 - - 0.0000000000000000000000000008588 131.0
BYD1_k127_1766341_3 TonB-dependent receptor K02014 - - 0.00000000001155 76.0
BYD1_k127_1821920_0 S-adenosylmethionine-dependent methyltransferase K06969,K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.173,2.1.1.191,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 367.0
BYD1_k127_1821920_1 GtrA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000005119 238.0
BYD1_k127_1821920_2 Protein of unknown function (DUF541) K09797 - - 0.0000000000000000000000000000000000000000000001286 177.0
BYD1_k127_1821920_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000005801 160.0
BYD1_k127_1821920_4 Protein of unknown function (DUF664) - - - 0.0000000000000000000272 98.0
BYD1_k127_1833144_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.0 1256.0
BYD1_k127_1833144_1 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 351.0
BYD1_k127_1833144_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000004137 61.0
BYD1_k127_1840470_0 Aconitase C-terminal domain K01681 - 4.2.1.3 8.987e-205 651.0
BYD1_k127_1840470_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 454.0
BYD1_k127_1852438_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000006969 188.0
BYD1_k127_1852438_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000004228 185.0
BYD1_k127_1852438_2 Bacterial membrane protein YfhO - - - 0.0000000000000000000000000000001208 137.0
BYD1_k127_1852438_3 arylsulfatase A - - - 0.000000000000000000000000001218 121.0
BYD1_k127_1853922_0 Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities K01782 GO:0003674,GO:0003824,GO:0003857,GO:0004300,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0008150,GO:0008152,GO:0008692,GO:0009056,GO:0009062,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0016854,GO:0016856,GO:0019395,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575 1.1.1.35,4.2.1.17,5.1.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 469.0
BYD1_k127_1853922_1 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008673 429.0
BYD1_k127_1853922_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 406.0
BYD1_k127_1853922_3 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000008576 198.0
BYD1_k127_1853922_4 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000000000009432 194.0
BYD1_k127_1853922_5 Uncharacterised protein family (UPF0158) - - - 0.0000000000001665 77.0
BYD1_k127_1853922_6 Glycosyl transferases group 1 - - - 0.000000000003776 72.0
BYD1_k127_1853922_7 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000001926 59.0
BYD1_k127_1865491_0 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 506.0
BYD1_k127_1865491_1 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000194 212.0
BYD1_k127_1865491_2 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000005549 189.0
BYD1_k127_1865491_3 PFAM phenylacetic acid catabolic family protein K02611 - 1.14.13.149 0.00000000000000000000000000000000000000000000001022 183.0
BYD1_k127_1865491_4 PFAM transferase hexapeptide repeat containing protein - - - 0.00000000000000000000000000000000000000000000006286 181.0
BYD1_k127_1865491_5 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000006488 168.0
BYD1_k127_1865491_6 Iron-sulfur cluster assembly protein K02612 - - 0.000001625 53.0
BYD1_k127_1877289_0 Mycolic acid cyclopropane synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007136 256.0
BYD1_k127_1877289_1 - - - - 0.000000000000000000000000000000000000004597 165.0
BYD1_k127_1880968_0 peroxiredoxin activity - - - 0.00000000000000000000000000000009126 133.0
BYD1_k127_1880968_1 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000012 103.0
BYD1_k127_1880968_2 Belongs to the peptidase S8 family - - - 0.00000000000001023 84.0
BYD1_k127_1880968_3 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.000000000002945 68.0
BYD1_k127_1880968_4 endo-1,4-beta-xylanase activity K21636 - 1.1.98.6 0.00004459 55.0
BYD1_k127_1904421_0 response regulator K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 362.0
BYD1_k127_1904421_1 Secretin and TonB N terminus short domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001295 260.0
BYD1_k127_1904421_10 translation initiation factor activity - - - 0.00005438 54.0
BYD1_k127_1904421_2 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000134 258.0
BYD1_k127_1904421_3 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000005122 239.0
BYD1_k127_1904421_4 Member of the two-component regulatory system AtoS AtoC. In the presence of acetoacetate, AtoS AtoC stimulates the expression of the atoDAEB operon, leading to short chain fatty acid catabolism and activation of the poly-(R)-3-hydroxybutyrate (cPHB) biosynthetic pathway. Also induces the operon in response to spermidine. Involved in the regulation of motility and chemotaxis, via transcriptional induction of the flagellar regulon. AtoS is a membrane-associated kinase that phosphorylates and activates AtoC in response to environmental signals K07710 GO:0000155,GO:0000160,GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0017076,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035556,GO:0035639,GO:0036094,GO:0036211,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.13.3 0.000000000000000000000000000000000000000000000006073 197.0
BYD1_k127_1904421_5 - - - - 0.00000000000000000000000000000000000000000006766 169.0
BYD1_k127_1904421_6 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000001031 123.0
BYD1_k127_1904421_7 PFAM Pilus assembly protein PilO K02664 - - 0.0000000000000000005629 95.0
BYD1_k127_1904421_8 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.0000000000667 75.0
BYD1_k127_1904421_9 pilus assembly protein PilN K02663 - - 0.0000004717 61.0
BYD1_k127_1937893_0 Arginyl tRNA synthetase N terminal domain K01887 - 6.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 447.0
BYD1_k127_1937893_1 PFAM PfkB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 343.0
BYD1_k127_1937893_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000009583 196.0
BYD1_k127_1937893_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000006403 132.0
BYD1_k127_1937893_4 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.00000000000004628 79.0
BYD1_k127_1937893_5 NusG domain II - - - 0.000000000001319 79.0
BYD1_k127_1937893_6 - - - - 0.00000001381 57.0
BYD1_k127_1956793_0 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 334.0
BYD1_k127_1956793_1 ADP-heptose-lipopolysaccharide heptosyltransferase activity K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 311.0
BYD1_k127_1956793_2 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000004691 185.0
BYD1_k127_1971158_0 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000000000000000004023 168.0
BYD1_k127_1971158_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000001858 76.0
BYD1_k127_2007071_0 PFAM Aldo keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009765 349.0
BYD1_k127_2007071_1 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000004822 102.0
BYD1_k127_2007071_2 Tetratricopeptide repeat - - - 0.0003693 53.0
BYD1_k127_2008356_0 WD40 domain protein beta Propeller K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 347.0
BYD1_k127_2008356_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000002313 238.0
BYD1_k127_2008356_2 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000002979 199.0
BYD1_k127_2008356_3 PFAM Na-Ca exchanger integrin-beta4 peptidase-like FG-GAP K20276 - - 0.00000000000000000000000000000000000000000001327 180.0
BYD1_k127_2008356_4 protein secretion - - - 0.00000000002205 76.0
BYD1_k127_2016539_0 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000008939 178.0
BYD1_k127_2016539_1 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.0000000000000000000000000145 126.0
BYD1_k127_2016539_2 -O-antigen - - - 0.0000000000000000000008412 108.0
BYD1_k127_2016539_3 PFAM Sporulation and spore germination - - - 0.0000000000005758 77.0
BYD1_k127_2021550_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 320.0
BYD1_k127_2021550_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000016 151.0
BYD1_k127_2021550_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000008422 89.0
BYD1_k127_2033750_0 HDOD domain - - - 0.000000000000000000000000000000000108 141.0
BYD1_k127_2033750_1 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000004395 141.0
BYD1_k127_2045773_0 KR domain K00023,K00059 - 1.1.1.100,1.1.1.36 0.00000000000000000000000000000000000000000000000000000000006347 222.0
BYD1_k127_2045773_1 TAP-like protein K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000009322 176.0
BYD1_k127_2045773_2 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000003439 80.0
BYD1_k127_2067791_0 AcrB/AcrD/AcrF family K15726 - - 2.507e-243 767.0
BYD1_k127_2067791_1 transcriptional regulator K16137 - - 0.0000000000000000000000000000000003767 138.0
BYD1_k127_2067791_2 Protein of unknown function (DUF1326) - - - 0.0000000007864 70.0
BYD1_k127_2089737_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 308.0
BYD1_k127_2089737_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004687 301.0
BYD1_k127_2089737_2 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002504 296.0
BYD1_k127_2089737_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007749 261.0
BYD1_k127_2089737_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000003506 185.0
BYD1_k127_2112812_0 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 310.0
BYD1_k127_2112812_1 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00207,K12527,K17723 - 1.3.1.1,1.3.1.2,1.97.1.9 0.000000000000000000000000000000000000000000000000000000000008015 209.0
BYD1_k127_2112812_2 Domain of unknown function (DUF296) K06934 - - 0.0000000000000000000008934 104.0
BYD1_k127_2149069_0 Aldehyde dehydrogenase (NAD) family protein K13922 - 1.2.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006847 466.0
BYD1_k127_2149069_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 430.0
BYD1_k127_2149069_2 Alpha amylase catalytic - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 340.0
BYD1_k127_2149069_3 Phosphoglucose isomerase K00616,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000004452 165.0
BYD1_k127_2149069_4 BMC K04027 - - 0.000000000000000000000000000000000001633 142.0
BYD1_k127_2149069_5 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.0000000000000000000000001515 109.0
BYD1_k127_2149069_6 Ethanolamine utilisation protein EutN/carboxysome - - - 0.00000000000000000000004642 102.0
BYD1_k127_2149069_7 BMC - - - 0.00000000000000001109 86.0
BYD1_k127_2149069_8 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000005905 94.0
BYD1_k127_2149069_9 SatD family (SatD) - - - 0.000003206 57.0
BYD1_k127_2175360_0 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 336.0
BYD1_k127_2175360_1 PFAM Tetratricopeptide repeat - - - 0.0000000000000000004159 102.0
BYD1_k127_2175360_2 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.00001132 51.0
BYD1_k127_2216175_0 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 390.0
BYD1_k127_2216175_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000001281 147.0
BYD1_k127_2239896_0 SERine Proteinase INhibitors K13963 GO:0003674,GO:0004857,GO:0004866,GO:0004867,GO:0005575,GO:0005576,GO:0005615,GO:0008150,GO:0009892,GO:0010466,GO:0010605,GO:0010951,GO:0019222,GO:0030162,GO:0030234,GO:0030414,GO:0031323,GO:0031324,GO:0032268,GO:0032269,GO:0043086,GO:0044092,GO:0044421,GO:0045861,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051336,GO:0051346,GO:0052547,GO:0052548,GO:0060255,GO:0061134,GO:0061135,GO:0065007,GO:0065009,GO:0080090,GO:0098772 - 0.0000000000000000000000000000000000000002942 166.0
BYD1_k127_2239896_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000002766 137.0
BYD1_k127_2239896_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation K00322 - 1.6.1.1 0.000000000000000000000000000000009343 128.0
BYD1_k127_2239896_3 Parallel beta-helix repeats - - - 0.0000000001496 75.0
BYD1_k127_2239896_4 Domain of unknown function (DUF4440) - - - 0.0000000002044 71.0
BYD1_k127_2244251_0 Glycine cleavage T-protein C-terminal barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 469.0
BYD1_k127_2244251_1 Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 400.0
BYD1_k127_2244251_2 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000000000000000000114 209.0
BYD1_k127_2244251_3 NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000008212 222.0
BYD1_k127_2244251_4 - - - - 0.00000000000000000003008 98.0
BYD1_k127_2244251_5 Subtilase family - - - 0.0000000006195 72.0
BYD1_k127_2289922_0 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 455.0
BYD1_k127_2310920_1 O-Antigen ligase - - - 0.0001469 54.0
BYD1_k127_2346165_0 PFAM NAD-dependent epimerase dehydratase - - - 2.092e-216 681.0
BYD1_k127_2346165_1 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004662 250.0
BYD1_k127_2346165_2 Cupin - - - 0.0000000002227 61.0
BYD1_k127_2350105_0 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002259 441.0
BYD1_k127_2350105_1 helix_turn_helix, Arsenical Resistance Operon Repressor K22298 GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010035,GO:0010038,GO:0010043,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0044212,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000002274 78.0
BYD1_k127_2352186_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000001759 232.0
BYD1_k127_2352186_1 PFAM Glycosyl transferase, group 1 - - - 0.00002906 54.0
BYD1_k127_2358000_0 Molybdopterin oxidoreductase, iron-sulfur binding subunit K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 595.0
BYD1_k127_237010_0 Dihydrodipicolinate reductase, N-terminus K21672 - 1.4.1.12,1.4.1.26 0.0000000000000000000000000000000000000000000000000000000000006509 224.0
BYD1_k127_237010_1 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000007628 50.0
BYD1_k127_2444057_0 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002732 448.0
BYD1_k127_2444057_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 323.0
BYD1_k127_2444057_2 calcium- and calmodulin-responsive adenylate cyclase activity K01179 - 3.2.1.4 0.00000001708 66.0
BYD1_k127_2457857_0 PFAM MotA TolQ ExbB proton channel K03561 - - 0.000000000000000000000000000000001567 140.0
BYD1_k127_2457857_1 Forkhead associated domain - - - 0.000000000002277 80.0
BYD1_k127_2457857_2 biopolymer transport protein - - - 0.00000000004758 72.0
BYD1_k127_2457857_3 Tetratricopeptide repeat - - - 0.000000002716 68.0
BYD1_k127_2457857_4 Tetratricopeptide repeat - - - 0.0000002574 57.0
BYD1_k127_2457857_5 repeat-containing protein - - - 0.000005444 58.0
BYD1_k127_2457857_6 Biopolymer transport protein ExbD TolR K03559 - - 0.0004153 49.0
BYD1_k127_2488132_0 Amidohydrolase family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 295.0
BYD1_k127_2488132_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000366 156.0
BYD1_k127_2489846_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000005147 134.0
BYD1_k127_2499641_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000001431 90.0
BYD1_k127_2499641_1 Tetratricopeptide repeat - - - 0.0005288 52.0
BYD1_k127_2505359_0 ATP:ADP antiporter activity K01932,K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 316.0
BYD1_k127_2505359_1 Protein kinase domain - - - 0.000000000000000000000000000000000000003207 150.0
BYD1_k127_2517028_0 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 481.0
BYD1_k127_2517028_1 TIGRFAM acetyl coenzyme A synthetase (ADP forming), alpha domain K01905,K22224 - 6.2.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 394.0
BYD1_k127_2517028_2 SMART ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000001844 206.0
BYD1_k127_2517028_3 Low affinity iron permease - - - 0.000000000000000000000000000000000000000000002983 168.0
BYD1_k127_2517028_4 Response regulator, receiver K02485 - - 0.00000000000000000001884 98.0
BYD1_k127_2517028_5 - - - - 0.000000000000002162 77.0
BYD1_k127_2517028_6 Evidence 4 Homologs of previously reported genes of - - - 0.00007547 49.0
BYD1_k127_2528285_0 DNA polymerase K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0 1127.0
BYD1_k127_2528285_1 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005041 336.0
BYD1_k127_2528285_2 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000004204 194.0
BYD1_k127_2528285_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.0003961 46.0
BYD1_k127_2539285_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 470.0
BYD1_k127_2539285_1 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000937 215.0
BYD1_k127_2539285_2 Rhomboid family - - - 0.000000000000000000000000000000004354 134.0
BYD1_k127_256318_0 Glycosyltransferase Family 4 - - - 1.404e-246 766.0
BYD1_k127_256318_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 1.665e-225 721.0
BYD1_k127_256318_2 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 584.0
BYD1_k127_256318_3 - - - - 0.00000000000000000000000000000000000000000001829 172.0
BYD1_k127_256318_4 - - - - 0.0000000000000000000676 93.0
BYD1_k127_2576523_0 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005104 285.0
BYD1_k127_2576523_1 TIGRFAM Na H antiporter, bacterial form K03316 - - 0.0000000000000000000000000000000000000000000000000000000000000000001997 246.0
BYD1_k127_2587390_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 295.0
BYD1_k127_2587390_1 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K04068,K10026 - 1.97.1.4,4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000001151 256.0
BYD1_k127_2587390_2 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000000000000000000004092 183.0
BYD1_k127_2587390_3 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000002248 167.0
BYD1_k127_2587390_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000001189 155.0
BYD1_k127_2587390_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000008503 156.0
BYD1_k127_2587390_6 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000009633 98.0
BYD1_k127_2587624_0 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004998 314.0
BYD1_k127_2587624_1 transferase activity, transferring glycosyl groups K03208 - - 0.0000000000000000000000000000000000000000000000000000000000002387 229.0
BYD1_k127_2587624_2 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.000000000004093 72.0
BYD1_k127_2595507_0 DEAD/H associated K03724 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 327.0
BYD1_k127_2595507_1 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000006023 257.0
BYD1_k127_2595507_2 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain - - - 0.00000002113 64.0
BYD1_k127_2596495_0 DEAD-like helicases superfamily K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008953 503.0
BYD1_k127_2596495_1 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 396.0
BYD1_k127_2596495_2 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 312.0
BYD1_k127_2596495_3 oxidoreductase activity K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000009879 229.0
BYD1_k127_2596495_4 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000001361 94.0
BYD1_k127_2602789_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 467.0
BYD1_k127_2602789_1 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 317.0
BYD1_k127_2602789_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0030964,GO:0032991,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0051536,GO:0051539,GO:0051540,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 308.0
BYD1_k127_2602789_3 Molybdopterin oxidoreductase Fe4S4 domain K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 287.0
BYD1_k127_2602789_4 Belongs to the complex I subunit 6 family K00339 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016021,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.000000000000000000000000000000000000000009204 166.0
BYD1_k127_2602789_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0050136,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1990204 1.6.5.3 0.0000000000000000000000000000002515 133.0
BYD1_k127_2604539_0 Sulfotransferase domain - - - 0.000000000000000000000000000000000000008971 159.0
BYD1_k127_2604539_1 Cytochrome c554 and c-prime - - - 0.000000000000000000000337 105.0
BYD1_k127_2618394_0 major pilin protein fima - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 347.0
BYD1_k127_2618394_1 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000000001924 70.0
BYD1_k127_2618394_2 Protein of unknown function (DUF2847) - - - 0.00000002157 56.0
BYD1_k127_2639328_0 HAD superfamily (subfamily IG) hydrolase 5'-Nucleotidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 372.0
BYD1_k127_2639328_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000004675 252.0
BYD1_k127_2639328_2 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000388 211.0
BYD1_k127_2639328_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000004988 206.0
BYD1_k127_2639328_4 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.000000000000000000000000107 122.0
BYD1_k127_2655209_0 glucose-6-phosphate dehydrogenase activity K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 592.0
BYD1_k127_2655209_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 574.0
BYD1_k127_2655209_2 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 380.0
BYD1_k127_2655209_3 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000002306 263.0
BYD1_k127_2655209_4 PFAM Rhomboid family protein K07059 - - 0.000000000000000000000000000000000000000000000000000000000000000002482 238.0
BYD1_k127_2655209_5 converts alpha-aldose to the beta-anomer - - - 0.0000000000000000000000000000000000000000000000000000000000000004291 233.0
BYD1_k127_2655209_6 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000000000006326 194.0
BYD1_k127_2655209_7 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.000000000000000000000000000000000155 141.0
BYD1_k127_2655209_8 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.0000001097 53.0
BYD1_k127_2677427_0 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000000000000000000000000000000007899 203.0
BYD1_k127_2677427_1 translation initiation inhibitor, yjgF family K04782 - 4.2.99.21 0.0000000000000000000000000000000000000000000003631 173.0
BYD1_k127_2677427_2 4-amino-4-deoxy-L-arabinose transferase activity K07264 - 2.4.2.43 0.0003345 45.0
BYD1_k127_2703461_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000008789 141.0
BYD1_k127_2703461_1 SLBB domain K01991 - - 0.00000000000000001691 90.0
BYD1_k127_2703461_2 Aminoglycoside phosphotransferase - - - 0.00000000000003469 86.0
BYD1_k127_2703461_3 protein involved in exopolysaccharide biosynthesis K16554 - - 0.0000000004064 71.0
BYD1_k127_2703461_4 Glycosyl transferase, family 2 - - - 0.00000001929 67.0
BYD1_k127_2715860_0 Carboxyl transferase domain K01966 - 2.1.3.15,6.4.1.3 3.652e-224 705.0
BYD1_k127_2715860_1 Beta-ketoacyl synthase, N-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000005041 243.0
BYD1_k127_2715860_2 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000008104 238.0
BYD1_k127_2715860_3 Protein of unknown function (DUF1579) - - - 0.0000000000000000000000000000000000001688 149.0
BYD1_k127_2715860_4 PFAM thioesterase superfamily - - - 0.0000000000000000000000003887 110.0
BYD1_k127_2715860_5 acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000003706 105.0
BYD1_k127_2741823_0 glycosyl transferase family K00697 - 2.4.1.15,2.4.1.347 4.845e-255 803.0
BYD1_k127_2741823_1 PFAM Glycoside hydrolase 15-related K01178 - 3.2.1.3 3.7e-248 778.0
BYD1_k127_2741823_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000001425 117.0
BYD1_k127_2741823_2 ATPase activity K02045 - 3.6.3.25 2.323e-201 648.0
BYD1_k127_2741823_3 histidine kinase HAMP region domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 518.0
BYD1_k127_2741823_4 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 454.0
BYD1_k127_2741823_5 COG0555 ABC-type sulfate transport system, permease component K02046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 357.0
BYD1_k127_2741823_6 TIGRFAM sulfate ABC transporter, permease protein CysW, sulfate ABC transporter, permease protein K02047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 365.0
BYD1_k127_2741823_7 Methyltransferase type 11 K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001617 278.0
BYD1_k127_2741823_8 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000001071 228.0
BYD1_k127_2741823_9 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000331 125.0
BYD1_k127_2766769_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 578.0
BYD1_k127_2766769_1 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 510.0
BYD1_k127_2766769_2 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 332.0
BYD1_k127_2766769_3 pectinesterase activity K10117 - - 0.000000000005988 67.0
BYD1_k127_278756_0 Type II/IV secretion system protein K02283,K20527 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 516.0
BYD1_k127_278756_1 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000000000000000000000004168 209.0
BYD1_k127_278756_2 Belongs to the GSP D family K02280 - - 0.00000000000000000000000000000000000000000000000006677 194.0
BYD1_k127_278756_3 NUBPL iron-transfer P-loop NTPase K02282 - - 0.0000000000000000000000000000000000000000000001481 183.0
BYD1_k127_278756_4 Pilus assembly protein CpaB K02279 - - 0.00000000000000000000000000000000005563 145.0
BYD1_k127_278756_5 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.000000000000000007109 91.0
BYD1_k127_278756_6 TadE-like protein - - - 0.0000000000001117 79.0
BYD1_k127_281344_0 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.00000000000000000000000000000000000000000000000000000000002843 214.0
BYD1_k127_281344_1 Belongs to the ompA family K03640 - - 0.000000000000000000000000000004911 125.0
BYD1_k127_281344_2 Tetratricopeptide repeat - - - 0.0006036 50.0
BYD1_k127_282127_0 Peptidase family M3 K01392 - 3.4.24.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 463.0
BYD1_k127_282127_1 Predicted integral membrane protein (DUF2270) - - - 0.000000000000000000000000000000000000000000000663 173.0
BYD1_k127_2826485_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 3.917e-256 822.0
BYD1_k127_2826485_1 Peptidase family M3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 518.0
BYD1_k127_2826485_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 410.0
BYD1_k127_2826485_3 PFAM Peptidase M29, aminopeptidase II K19689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 389.0
BYD1_k127_2826485_4 Glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000004782 233.0
BYD1_k127_2826485_5 chaperone-mediated protein folding - - - 0.00000000000000000000000000006088 135.0
BYD1_k127_2874911_0 ABC transporter K06020 - 3.6.3.25 4.376e-293 907.0
BYD1_k127_2874911_1 Sigma-54 interaction domain K07714 - - 0.000000000000000000000000000002628 126.0
BYD1_k127_2874911_2 cellulose binding - - - 0.0000000000000000243 91.0
BYD1_k127_2906569_0 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 559.0
BYD1_k127_2906569_1 succinate dehydrogenase, flavoprotein subunit K00239 GO:0000104,GO:0000166,GO:0001539,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0006113,GO:0006928,GO:0006950,GO:0006974,GO:0006996,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016043,GO:0016491,GO:0016627,GO:0022607,GO:0022900,GO:0030030,GO:0030031,GO:0032991,GO:0033554,GO:0036094,GO:0040011,GO:0043167,GO:0043168,GO:0044085,GO:0044237,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0044780,GO:0044781,GO:0045273,GO:0045274,GO:0045283,GO:0045284,GO:0045333,GO:0048037,GO:0048870,GO:0050660,GO:0050662,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0055114,GO:0070469,GO:0070470,GO:0070925,GO:0071840,GO:0071944,GO:0071949,GO:0071973,GO:0097159,GO:0097588,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 454.0
BYD1_k127_2906569_2 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 353.0
BYD1_k127_2906569_3 phosphorelay sensor kinase activity - - - 0.0000000000000000000000000000000000000000143 174.0
BYD1_k127_2906569_4 Domain of unknown function (DUF4154) - - - 0.000000000000000000003549 109.0
BYD1_k127_2906569_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000002368 96.0
BYD1_k127_2946358_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 297.0
BYD1_k127_2946358_1 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000208 244.0
BYD1_k127_2971636_0 fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 375.0
BYD1_k127_2971636_1 Glyoxalase bleomycin resistance protein dioxygenase superfamily protein 19 - - - 0.00000000000000000000000000000000000000000000000006316 186.0
BYD1_k127_2984285_0 Polysaccharide biosynthesis C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000005104 246.0
BYD1_k127_2984285_1 TonB-dependent receptor K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000001199 201.0
BYD1_k127_2984285_2 Dehydrogenase - - - 0.000000000000000000000000000000000000000000302 168.0
BYD1_k127_2984285_3 Peptidase family M28 - - - 0.00000000000000000000000000000003686 133.0
BYD1_k127_2984285_4 Acetyltransferase (GNAT) family K06976 - - 0.000000000000005002 86.0
BYD1_k127_2989735_0 PFAM Major Facilitator Superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004022 342.0
BYD1_k127_2989735_1 Conserved hypothetical protein 698 - - - 0.00000000000000000000000000000000000000000000000000000000000000000768 237.0
BYD1_k127_2989735_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000006408 221.0
BYD1_k127_2989735_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000001549 66.0
BYD1_k127_301108_0 tryptophan 2,3-dioxygenase activity K00453,K03392 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11,4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 413.0
BYD1_k127_301108_1 Selenocysteine lyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 289.0
BYD1_k127_301108_2 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000003201 75.0
BYD1_k127_3020472_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000096 122.0
BYD1_k127_3037032_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 421.0
BYD1_k127_3037032_1 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 409.0
BYD1_k127_3037032_2 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 317.0
BYD1_k127_3037032_3 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003285 267.0
BYD1_k127_3037032_4 domain, Protein - - - 0.000000000000000000000000004204 117.0
BYD1_k127_3047279_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 574.0
BYD1_k127_3047279_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 342.0
BYD1_k127_3047279_10 ompA family - - - 0.00008133 54.0
BYD1_k127_3047279_11 ompA family - - - 0.00008678 55.0
BYD1_k127_3047279_12 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0002226 53.0
BYD1_k127_3047279_13 extracellular matrix structural constituent - - - 0.0006309 53.0
BYD1_k127_3047279_2 transport system permease component K01992 - - 0.00000000000000000000000000000000000000000000000000000000000946 216.0
BYD1_k127_3047279_3 transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000001032 192.0
BYD1_k127_3047279_4 - - - - 0.00000000000000000000000000000000000002637 150.0
BYD1_k127_3047279_5 MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000001177 102.0
BYD1_k127_3047279_6 long-chain fatty acid transporting porin activity - - - 0.000000000002364 79.0
BYD1_k127_3047279_7 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.0000000005322 67.0
BYD1_k127_3047279_8 tetratricopeptide repeat - - - 0.0000001618 65.0
BYD1_k127_3047279_9 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.00004899 53.0
BYD1_k127_3063269_0 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003664 293.0
BYD1_k127_3063269_1 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000001475 179.0
BYD1_k127_3063269_2 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000003 186.0
BYD1_k127_3063269_3 Rhomboid family - - - 0.000000000000000000000009093 115.0
BYD1_k127_3063269_4 positive regulation of macromolecule biosynthetic process K03973 - - 0.00000000000000002943 93.0
BYD1_k127_3063269_5 Outer membrane lipoprotein K05807 - - 0.00000000000000007147 90.0
BYD1_k127_3063269_6 long-chain fatty acid transporting porin activity - - - 0.00000003079 67.0
BYD1_k127_3063269_7 ompA family - - - 0.00000003694 66.0
BYD1_k127_3090980_0 - - - - 0.0000000000000000000000000000000000000000000000000000000007745 222.0
BYD1_k127_3090980_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000002443 100.0
BYD1_k127_3102901_0 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.000000000000000000000000000000000002038 158.0
BYD1_k127_3105010_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K13924 - 2.1.1.80,3.1.1.61 1.292e-290 934.0
BYD1_k127_3105010_1 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 464.0
BYD1_k127_3105010_10 DNA polymerase X K02347 - - 0.000000000000000000007099 93.0
BYD1_k127_3105010_11 Polymorphic membrane protein, Chlamydia - - - 0.00000002424 67.0
BYD1_k127_3105010_2 O-methyltransferase K09846 - 2.1.1.210 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 455.0
BYD1_k127_3105010_3 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 339.0
BYD1_k127_3105010_4 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 289.0
BYD1_k127_3105010_5 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000921 237.0
BYD1_k127_3105010_6 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000000000000000001904 226.0
BYD1_k127_3105010_7 - - - - 0.0000000000000000000000000000000000000000000000000003609 194.0
BYD1_k127_3105010_8 PFAM Alpha beta hydrolase fold-1 - - - 0.0000000000000000000000000000000000000000000000000008402 195.0
BYD1_k127_3105010_9 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.0000000000000000000000000002708 119.0
BYD1_k127_3144604_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 2.767e-307 960.0
BYD1_k127_3144604_1 Evidence 5 No homology to any previously reported sequences K03643 GO:0001530,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006869,GO:0008150,GO:0008289,GO:0009279,GO:0009987,GO:0010876,GO:0015920,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044462,GO:0044464,GO:0045229,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071709,GO:0071840,GO:0071944,GO:0097367,GO:1901264 - 0.0000000000000000000004437 100.0
BYD1_k127_3155961_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000001442 248.0
BYD1_k127_3155961_1 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain - - - 0.000000000000000002008 98.0
BYD1_k127_3155961_2 Domain of unknown function (DUF5060) - - - 0.0000000000000005597 92.0
BYD1_k127_3155961_3 - - - - 0.0004867 48.0
BYD1_k127_3164694_0 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000009988 220.0
BYD1_k127_3195173_0 Oxidoreductase family, NAD-binding Rossmann fold K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 339.0
BYD1_k127_3195173_1 TPR repeat - - - 0.0005382 51.0
BYD1_k127_3197739_0 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 362.0
BYD1_k127_3197739_1 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000001094 196.0
BYD1_k127_320117_0 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001323 227.0
BYD1_k127_320117_1 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000306 209.0
BYD1_k127_3210157_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 362.0
BYD1_k127_3210157_1 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000006746 198.0
BYD1_k127_3210157_2 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000006771 183.0
BYD1_k127_3210157_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000002289 171.0
BYD1_k127_3210157_4 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000001272 135.0
BYD1_k127_3210157_5 metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000001855 133.0
BYD1_k127_3210157_6 response regulator containing a CheY-like receiver domain and a GGDEF domain K02488 - 2.7.7.65 0.000000000000000000000235 110.0
BYD1_k127_3217677_0 Pfam:KaiC K08482 - - 5.196e-219 691.0
BYD1_k127_3217677_1 PhoQ Sensor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 433.0
BYD1_k127_3217677_2 KaiB K08481 - - 0.0000000000000000000000000000000003571 147.0
BYD1_k127_3217677_3 - - - - 0.00000000000000000000000000008325 130.0
BYD1_k127_3219042_0 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005639 357.0
BYD1_k127_3219042_1 cyclohydrolase K01746 - 4.3.1.4 0.000001858 54.0
BYD1_k127_3231513_0 Transglycosylase SLT domain K08307,K12204 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 339.0
BYD1_k127_3231513_1 Glycosyltransferase, group 4 family K02851 - 2.7.8.33,2.7.8.35 0.00000000000000000000000000000001285 137.0
BYD1_k127_3254366_0 PFAM Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 547.0
BYD1_k127_3263679_0 oligosaccharyl transferase activity - - - 0.000000000000000001299 101.0
BYD1_k127_3267802_0 transcription factor binding K02584,K11914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000428 250.0
BYD1_k127_3273670_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000002229 137.0
BYD1_k127_3273670_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000001113 117.0
BYD1_k127_3282238_0 Acyl-CoA dehydrogenase, middle domain - - - 6.243e-199 641.0
BYD1_k127_3282238_1 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000062 529.0
BYD1_k127_3282238_2 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001248 248.0
BYD1_k127_3282238_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000000001398 216.0
BYD1_k127_3282238_4 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000000000001588 186.0
BYD1_k127_3282238_5 TPM domain - - - 0.0000000000000000000000000000000006357 145.0
BYD1_k127_3282238_6 cellulose binding K00505 - 1.14.18.1 0.0000002459 64.0
BYD1_k127_3282238_8 Fibronectin type III domain - - - 0.0002624 53.0
BYD1_k127_3286018_0 imidazolonepropionase activity K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000004678 223.0
BYD1_k127_3286018_1 Squalene/phytoene synthase K00801 - 2.5.1.21 0.0000000000104 74.0
BYD1_k127_3299192_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 304.0
BYD1_k127_3299192_1 Required for chromosome condensation and partitioning K03529,K19171 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000004447 250.0
BYD1_k127_3299192_2 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000001693 165.0
BYD1_k127_3299192_3 response regulator receiver - - - 0.0000000000000000000002621 112.0
BYD1_k127_3299192_4 GGDEF domain containing protein - - - 0.000000000000000004928 98.0
BYD1_k127_3299192_5 Methyltransferase domain - - - 0.0000000000000001396 90.0
BYD1_k127_3299192_6 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000001063 63.0
BYD1_k127_3378508_0 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 497.0
BYD1_k127_3378508_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07538 - 1.1.1.368 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 379.0
BYD1_k127_3378508_2 benzoyl-CoA reductase K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 351.0
BYD1_k127_3378508_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000007416 256.0
BYD1_k127_3378508_4 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.000000000000000000000000000000000000000000000000000000003687 209.0
BYD1_k127_3378508_5 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 0.00000000000004158 74.0
BYD1_k127_3388244_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000002183 202.0
BYD1_k127_3388244_1 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000000000000000006394 166.0
BYD1_k127_3388244_2 HDOD domain - - - 0.000000000000000000004349 98.0
BYD1_k127_3388244_3 translation initiation factor activity K06996 - - 0.0000006078 62.0
BYD1_k127_3393464_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 440.0
BYD1_k127_3393464_1 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 338.0
BYD1_k127_3393464_2 extracellular matrix structural constituent - - - 0.000000000000479 83.0
BYD1_k127_3393464_3 lipolytic protein G-D-S-L family K18650 - 3.2.1.82 0.000000000002126 79.0
BYD1_k127_3393464_4 PFAM Radical SAM domain protein - - - 0.00003169 54.0
BYD1_k127_3395844_0 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 327.0
BYD1_k127_3395844_1 AAA ATPase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000004912 185.0
BYD1_k127_3411103_0 PFAM Type II secretion system protein E - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 393.0
BYD1_k127_3411103_1 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 384.0
BYD1_k127_3411103_10 transport system auxiliary component K18480 - - 0.0000000000008341 78.0
BYD1_k127_3411103_2 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 349.0
BYD1_k127_3411103_3 Abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004471 284.0
BYD1_k127_3411103_4 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000004196 233.0
BYD1_k127_3411103_5 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000000000000005143 209.0
BYD1_k127_3411103_6 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.000000000000000000000000000000000000000001908 168.0
BYD1_k127_3411103_7 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000001969 168.0
BYD1_k127_3411103_8 metal-dependent phosphohydrolase HD - - - 0.000000000000000000000000000000000000000006289 173.0
BYD1_k127_3411103_9 OsmC-like protein - - - 0.000000000000003944 76.0
BYD1_k127_342979_0 FAD linked oxidase domain protein - - - 7.644e-197 623.0
BYD1_k127_342979_1 major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 362.0
BYD1_k127_342979_2 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 342.0
BYD1_k127_3459836_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.993e-208 677.0
BYD1_k127_3459836_1 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003191 256.0
BYD1_k127_3459836_2 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000002234 88.0
BYD1_k127_3460307_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K00174 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0030312,GO:0044464,GO:0050896,GO:0055114,GO:0071944 1.2.7.11,1.2.7.3 2.268e-235 756.0
BYD1_k127_3460307_1 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 364.0
BYD1_k127_3460307_2 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01007,K08483 - 2.7.3.9,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 327.0
BYD1_k127_3460307_3 DHH family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000129 269.0
BYD1_k127_3460307_4 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000009587 157.0
BYD1_k127_3460307_5 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000001582 124.0
BYD1_k127_3460307_6 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000000000614 96.0
BYD1_k127_3460307_7 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.000002317 58.0
BYD1_k127_3460307_8 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.0005313 51.0
BYD1_k127_3467413_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 370.0
BYD1_k127_3467413_1 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 335.0
BYD1_k127_3467413_2 Extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000001709 205.0
BYD1_k127_3476014_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 589.0
BYD1_k127_3476014_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 399.0
BYD1_k127_3492107_0 mercury ion transmembrane transporter activity K07213 - - 0.000000003025 66.0
BYD1_k127_3496871_0 aconitate hydratase activity K01681 - 4.2.1.3 6.292e-313 980.0
BYD1_k127_3496871_1 - - - - 0.0000000000000000000000008451 113.0
BYD1_k127_3517238_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 4.261e-312 969.0
BYD1_k127_3517238_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004519 308.0
BYD1_k127_3517238_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000005182 208.0
BYD1_k127_3517238_3 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.0000000000000000000000000000000000000000000000000000001416 195.0
BYD1_k127_3559286_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 345.0
BYD1_k127_3559286_1 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000005784 155.0
BYD1_k127_3559286_2 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.00000000000000000000000000000004672 141.0
BYD1_k127_3600802_0 4Fe-4S binding domain - - - 2.017e-205 662.0
BYD1_k127_3600802_1 NUDIX domain - - - 0.000000000000000000000000000000000000000000000005481 181.0
BYD1_k127_3600802_2 spermidine synthase activity K00797 GO:0006576,GO:0006595,GO:0006596,GO:0006807,GO:0008150,GO:0008152,GO:0008216,GO:0008295,GO:0009058,GO:0009308,GO:0009309,GO:0009987,GO:0034641,GO:0042401,GO:0044106,GO:0044237,GO:0044249,GO:0044271,GO:0071704,GO:0097164,GO:1901564,GO:1901566,GO:1901576 2.5.1.16 0.00000000000000000000000000000000000000000000002398 190.0
BYD1_k127_3639771_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 521.0
BYD1_k127_3639771_1 Domains REC, sigma54 interaction, HTH8 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 385.0
BYD1_k127_3639771_2 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 356.0
BYD1_k127_3639771_3 GGDEF domain - - - 0.000000000000000000000000000000000000000000000001327 188.0
BYD1_k127_3639771_4 undecaprenyl-phosphate glucose phosphotransferase activity K03606,K05946,K21303 GO:0000271,GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009243,GO:0009987,GO:0016051,GO:0016740,GO:0016772,GO:0016780,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046402,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.187,2.7.8.40 0.00000000000000000000000000000007155 126.0
BYD1_k127_3639771_5 STAS domain K04749 - - 0.0000000000000004766 84.0
BYD1_k127_3652998_0 Belongs to the glycosyl hydrolase 2 family - - - 9.901e-239 746.0
BYD1_k127_3652998_1 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000002027 252.0
BYD1_k127_3657646_0 4Fe-4S dicluster domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 338.0
BYD1_k127_3702947_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903,K14067 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009361,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0032991,GO:0042709,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045333,GO:0055114,GO:0071704,GO:0072350,GO:1902494 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 409.0
BYD1_k127_3702947_1 Phosphomethylpyrimidine kinase K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004997 293.0
BYD1_k127_3702947_2 Periplasmic copper-binding protein (NosD) - - - 0.000000000000000000000000000000000000000000000002362 194.0
BYD1_k127_3702947_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000007668 172.0
BYD1_k127_3705967_0 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 567.0
BYD1_k127_3705967_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 330.0
BYD1_k127_3712883_0 Mo-molybdopterin cofactor metabolic process K03148,K03636,K21029,K21147 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006732,GO:0006777,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009108,GO:0009605,GO:0009607,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0016782,GO:0018130,GO:0019344,GO:0019538,GO:0019637,GO:0019720,GO:0019752,GO:0020012,GO:0030312,GO:0030682,GO:0042783,GO:0043170,GO:0043207,GO:0043436,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0050896,GO:0051186,GO:0051188,GO:0051189,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051810,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0061605,GO:0070566,GO:0071704,GO:0071944,GO:0075136,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.73,2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 577.0
BYD1_k127_3712883_1 AlkA N-terminal domain K13529,K13530 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 445.0
BYD1_k127_3712883_2 Glycosyl transferases group 1 K19424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002934 261.0
BYD1_k127_3712883_3 JAB/MPN domain K21140 - 3.13.1.6 0.0000000000000000000000000000000000002838 146.0
BYD1_k127_3712883_4 Iron-sulfur cluster assembly accessory protein K13628 - - 0.0000000000000000000000000039 113.0
BYD1_k127_3729890_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 500.0
BYD1_k127_3729890_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0040007,GO:0042546,GO:0042802,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044464,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 484.0
BYD1_k127_3729890_10 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 322.0
BYD1_k127_3729890_11 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002324 281.0
BYD1_k127_3729890_12 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000003671 256.0
BYD1_k127_3729890_13 Mur ligase family, catalytic domain K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000007152 259.0
BYD1_k127_3729890_14 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000008774 218.0
BYD1_k127_3729890_15 Cell wall formation K00075,K01921 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008360,GO:0008762,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0022603,GO:0022604,GO:0030203,GO:0034645,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045229,GO:0048037,GO:0050660,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0055114,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.1.98,6.3.2.4 0.00000000000000000000000000000000000000000000000000000000009801 215.0
BYD1_k127_3729890_16 PFAM Conserved nitrate reductase-associated protein (Nitr_red_assoc) - - - 0.000000000000000000000000000000004528 134.0
BYD1_k127_3729890_17 SWI complex, BAF60b domains - - - 0.00000000000000000000000000006405 125.0
BYD1_k127_3729890_18 Essential cell division protein K03589 - - 0.000000006298 67.0
BYD1_k127_3729890_19 Belongs to the glycosyl hydrolase 18 family - - - 0.0003633 50.0
BYD1_k127_3729890_2 electron transfer activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 448.0
BYD1_k127_3729890_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 433.0
BYD1_k127_3729890_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 424.0
BYD1_k127_3729890_5 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 394.0
BYD1_k127_3729890_6 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 373.0
BYD1_k127_3729890_7 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005749 355.0
BYD1_k127_3729890_8 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 339.0
BYD1_k127_3729890_9 ethanolamine catabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004965 314.0
BYD1_k127_3737072_0 4Fe-4S dicluster domain K17723 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 609.0
BYD1_k127_3737072_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K07250 - 2.6.1.19,2.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 403.0
BYD1_k127_3737072_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster K17722 - 1.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 400.0
BYD1_k127_3741253_0 proline dipeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 360.0
BYD1_k127_3741253_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003468 293.0
BYD1_k127_3741253_2 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002549 271.0
BYD1_k127_3741253_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000005826 233.0
BYD1_k127_3741253_4 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000003947 202.0
BYD1_k127_3741253_5 Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1''-2''-cyclic phosphate (APPR P). May function as an ADP- ribosylase K07559 - - 0.00000000000000000000000000000002521 135.0
BYD1_k127_3741253_6 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000007467 102.0
BYD1_k127_3741253_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000007604 106.0
BYD1_k127_3746014_0 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 452.0
BYD1_k127_3746014_1 chorismate mutase domain of gram positive AroA protein K13853 - 2.5.1.54,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004629 359.0
BYD1_k127_3746014_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 330.0
BYD1_k127_3746014_3 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005937 291.0
BYD1_k127_3746014_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000034 234.0
BYD1_k127_3746014_5 - - - - 0.00000000000000000000000000000000000000000008055 166.0
BYD1_k127_3746014_6 cellular response to DNA damage stimulus K07340 - - 0.00000000000000000000000000000000000001347 149.0
BYD1_k127_3746014_7 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000006184 143.0
BYD1_k127_3765024_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 614.0
BYD1_k127_3765024_1 mannose-ethanolamine phosphotransferase activity - - - 0.00000008569 64.0
BYD1_k127_3777752_0 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000009599 236.0
BYD1_k127_3777752_1 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) K06169 - - 0.00000000000000000000000000000000000000000000000000000000007868 209.0
BYD1_k127_3777752_2 Belongs to the peptidase S8 family - - - 0.00000000000000000000000002051 123.0
BYD1_k127_3777752_3 belongs to the glycosyl hydrolase 13 family - - - 0.000000000000002834 88.0
BYD1_k127_3784708_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006107 559.0
BYD1_k127_3784708_1 Predicted membrane protein (DUF2079) - - - 0.000000000000000000000000000000000000000000000000001948 204.0
BYD1_k127_3784708_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000001968 129.0
BYD1_k127_3787075_0 PglZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003558 589.0
BYD1_k127_3787075_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 368.0
BYD1_k127_3787075_10 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 GO:0001676,GO:0003674,GO:0003676,GO:0003677,GO:0003723,GO:0003729,GO:0003824,GO:0003989,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006417,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008270,GO:0008610,GO:0009058,GO:0009317,GO:0009329,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0017148,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032787,GO:0032991,GO:0034248,GO:0034249,GO:0042759,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:0097159,GO:1901363,GO:1901576,GO:1902494,GO:1990234,GO:2000112,GO:2000113 2.1.3.15,6.4.1.2 0.000000000000937 73.0
BYD1_k127_3787075_2 Integral membrane sensor signal transduction histidine kinase K07709,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001309 281.0
BYD1_k127_3787075_3 polysaccharide export K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000009524 236.0
BYD1_k127_3787075_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000002427 220.0
BYD1_k127_3787075_5 Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.000000000000000000000000000000000000000000000000001534 196.0
BYD1_k127_3787075_6 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000003104 160.0
BYD1_k127_3787075_7 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000004846 128.0
BYD1_k127_3787075_8 Glycoprotease family K14742 - - 0.000000000000000000000002441 112.0
BYD1_k127_3787075_9 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000857 107.0
BYD1_k127_3811209_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 346.0
BYD1_k127_3811209_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000002633 97.0
BYD1_k127_3840084_0 Mitochondrial biogenesis AIM24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 373.0
BYD1_k127_3840084_1 Glycosyltransferase Family 4 K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000003795 194.0
BYD1_k127_3840084_2 Cupin domain - - - 0.0000000000000000000000000000000000000000000000003781 178.0
BYD1_k127_3840084_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000002571 153.0
BYD1_k127_3840084_4 sodium ABC transporter, permease K09696 - - 0.00000000000000000000000003117 119.0
BYD1_k127_3843121_0 PFAM NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 365.0
BYD1_k127_3843121_1 PFAM phospholipase Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005587 263.0
BYD1_k127_3843121_2 Bacterial extracellular solute-binding protein, family 7 K11688,K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000005459 228.0
BYD1_k127_3843121_3 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000001381 165.0
BYD1_k127_3864369_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005313 554.0
BYD1_k127_3864369_1 OsmC-like protein - - - 0.000000000000003944 76.0
BYD1_k127_3874202_0 dCMP deaminase activity K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000004503 200.0
BYD1_k127_3874202_1 methyltransferase K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.00000000000000000000000000001102 138.0
BYD1_k127_3874202_2 Adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000016 65.0
BYD1_k127_3883022_0 UvrD/REP helicase N-terminal domain K03656,K03657 GO:0000018,GO:0000166,GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009650,GO:0009892,GO:0009987,GO:0010605,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0030312,GO:0030554,GO:0031323,GO:0031324,GO:0032392,GO:0032508,GO:0032552,GO:0032554,GO:0032558,GO:0032564,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0036094,GO:0040007,GO:0042623,GO:0043138,GO:0043140,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0045910,GO:0045934,GO:0046483,GO:0046872,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0051276,GO:0051716,GO:0060255,GO:0060542,GO:0060543,GO:0065007,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097367,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003109 601.0
BYD1_k127_3883022_1 PFAM RNA recognition motif - - - 0.000000000000000000000000000000001435 132.0
BYD1_k127_3883022_2 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000007418 89.0
BYD1_k127_3883022_3 - - - - 0.000000000000867 70.0
BYD1_k127_3883022_4 AI-2E family transporter - - - 0.0000000002231 68.0
BYD1_k127_3883022_5 - - - - 0.000000000428 68.0
BYD1_k127_3891422_0 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000344 274.0
BYD1_k127_3891422_1 hydroperoxide reductase activity - - - 0.0000000000000000000000001385 109.0
BYD1_k127_3891422_2 hydroperoxide reductase activity - - - 0.000000000000000009693 87.0
BYD1_k127_3961176_0 transcription factor binding K02584,K11914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 370.0
BYD1_k127_3966805_0 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 339.0
BYD1_k127_3966805_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000459 313.0
BYD1_k127_3966805_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005594 299.0
BYD1_k127_3966805_3 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.00000000000000000000000000000000000000000000000000000000000001014 233.0
BYD1_k127_3966805_4 Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000003099 163.0
BYD1_k127_3966805_5 - K03641 - - 0.000000000000000000000000001759 126.0
BYD1_k127_3966805_6 Peptidase M56 - - - 0.0000000000000000000353 103.0
BYD1_k127_3991269_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 1.019e-200 642.0
BYD1_k127_3991269_1 membrane protein involved in D-alanine K19294 - - 0.000000000000000000000000000000000000001316 156.0
BYD1_k127_3991269_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000567 123.0
BYD1_k127_3991269_3 - - - - 0.00000000000000006376 88.0
BYD1_k127_4104221_0 transferase activity, transferring glycosyl groups K19002 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006629,GO:0006643,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046872,GO:0071704,GO:1901576 2.4.1.337 0.000000000000000000005111 104.0
BYD1_k127_4104221_1 protein conserved in bacteria K09973 - - 0.00000000000000000001878 106.0
BYD1_k127_4104221_2 Methylamine utilisation protein MauE - - - 0.00000000000000001642 96.0
BYD1_k127_4104221_3 Rhodanese Homology Domain - - - 0.00001389 54.0
BYD1_k127_4115343_0 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 508.0
BYD1_k127_4115343_1 CHAD domain containing protein - - - 0.0000000000000000000000000000000004262 142.0
BYD1_k127_4115343_2 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000001659 96.0
BYD1_k127_4117152_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 378.0
BYD1_k127_4117152_1 tRNA synthetases class II (D, K and N) K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000000000000000000000000000000000000000000000000000009885 208.0
BYD1_k127_4117152_2 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000002929 159.0
BYD1_k127_4122135_0 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000011 163.0
BYD1_k127_4122135_1 twitching motility protein K02669 - - 0.00000000000000000000000000019 120.0
BYD1_k127_4122135_2 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000005005 123.0
BYD1_k127_4133389_0 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003134 249.0
BYD1_k127_4133389_1 Ferritin-like domain K03594 - 1.16.3.1 0.0000000000000000000000000000000000000000000000000000000003021 208.0
BYD1_k127_4133389_2 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000001181 194.0
BYD1_k127_4140726_0 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 316.0
BYD1_k127_4140726_1 - - - - 0.000000000000000000000000000000000000001063 156.0
BYD1_k127_4140726_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000003643 118.0
BYD1_k127_4183311_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000001034 196.0
BYD1_k127_4193981_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006874 437.0
BYD1_k127_4193981_1 TIGRFAM ornithine aminotransferase K00819 - 2.6.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 358.0
BYD1_k127_4193981_2 Aldehyde dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000006904 230.0
BYD1_k127_4193981_3 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000009522 212.0
BYD1_k127_4193981_4 Dodecin K09165 - - 0.00000000000000003433 86.0
BYD1_k127_4195222_0 PFAM FIST C domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 331.0
BYD1_k127_4195222_1 Diacylglycerol kinase K07029 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.107 0.00000000000000000000000000000000000000003303 163.0
BYD1_k127_4195222_2 - - - - 0.0000000000000000000000000000001538 137.0
BYD1_k127_4195222_3 DinB superfamily - - - 0.0000000000000000000000005259 111.0
BYD1_k127_4195222_4 - - - - 0.00000000000000000006223 93.0
BYD1_k127_4195222_5 Sec-independent protein translocase protein TatA K03116 - - 0.0000000003883 64.0
BYD1_k127_4195222_6 Polymer-forming cytoskeletal - - - 0.000000000503 66.0
BYD1_k127_4195222_7 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 GO:0002682,GO:0002683,GO:0005575,GO:0005576,GO:0008150,GO:0009605,GO:0009607,GO:0031347,GO:0031348,GO:0035821,GO:0040007,GO:0043207,GO:0044003,GO:0044403,GO:0044413,GO:0044414,GO:0044419,GO:0045088,GO:0045824,GO:0048519,GO:0048583,GO:0048585,GO:0050776,GO:0050777,GO:0050789,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0051832,GO:0051833,GO:0052031,GO:0052037,GO:0052167,GO:0052170,GO:0052173,GO:0052200,GO:0052255,GO:0052261,GO:0052306,GO:0052309,GO:0052552,GO:0052553,GO:0052561,GO:0052562,GO:0052564,GO:0052572,GO:0065007,GO:0075136,GO:0080134 4.6.1.17 0.00000002097 57.0
BYD1_k127_4216765_0 galactose-1-phosphate uridylyltransferase K00965 GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006793,GO:0006796,GO:0008108,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0009056,GO:0009987,GO:0016052,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016779,GO:0019200,GO:0019318,GO:0019320,GO:0019388,GO:0033499,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046835,GO:0046872,GO:0046914,GO:0070569,GO:0071704,GO:1901575 2.7.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 458.0
BYD1_k127_4216765_1 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 354.0
BYD1_k127_4216765_2 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000005886 178.0
BYD1_k127_4216765_3 Domain of unknown function (DUF892) - - - 0.00000000000000000000000000000000000000000001063 169.0
BYD1_k127_4216765_4 Belongs to the glycosyl hydrolase 2 family - - - 0.000000000000000000022 94.0
BYD1_k127_4260741_0 Peptidase M16 - - - 0.000000000000000000000000000000000001561 144.0
BYD1_k127_4260741_1 HD-GYP domain K03540 - 3.1.26.5 0.0000000000000000000000005479 109.0
BYD1_k127_4260741_2 - - - - 0.00000000000001982 79.0
BYD1_k127_4288946_0 PFAM aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002666 311.0
BYD1_k127_4288946_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000004907 218.0
BYD1_k127_4288946_2 - - - - 0.0000000000000000000000000000000000000000000000217 175.0
BYD1_k127_4288946_3 - - - - 0.0000000000000000000001476 102.0
BYD1_k127_4288946_4 TonB-dependent Receptor Plug Domain K02014 - - 0.0004358 51.0
BYD1_k127_4296802_0 Exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 557.0
BYD1_k127_4296802_1 thiosulfate sulfurtransferase activity K00406,K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000005004 183.0
BYD1_k127_4296802_2 methyltransferase - - - 0.0000000000000007822 86.0
BYD1_k127_4312281_0 ATPase associated with various cellular K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 445.0
BYD1_k127_4312281_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001131 280.0
BYD1_k127_4337874_0 DEAD DEAH box helicase K03724 - - 0.0 1164.0
BYD1_k127_4381501_0 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02372,K02535,K13599,K16363 GO:0003674,GO:0003824,GO:0016829,GO:0016835,GO:0016836,GO:0019171 3.5.1.108,4.2.1.59 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 449.0
BYD1_k127_4381501_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000323 275.0
BYD1_k127_4381501_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000002295 275.0
BYD1_k127_4381501_3 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.000000000000000000000000000000001491 135.0
BYD1_k127_4421353_0 Diguanylate cyclase, GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000713 298.0
BYD1_k127_4421353_1 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000001697 209.0
BYD1_k127_4421353_2 PFAM response regulator receiver K02483,K07658,K07668 - - 0.000000000000000000000000000000000005802 151.0
BYD1_k127_4421353_3 phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000009202 135.0
BYD1_k127_4421353_4 Helix-turn-helix domain - - - 0.00000000000000000000000002579 121.0
BYD1_k127_4421353_5 Cna protein B-type domain - - - 0.000000000000001088 92.0
BYD1_k127_4421353_6 Bacterial Ig-like domain (group 3) K01179 - 3.2.1.4 0.0000002645 64.0
BYD1_k127_4421353_7 Type II transport protein GspH K08084 - - 0.0000002808 61.0
BYD1_k127_4421353_8 Prokaryotic N-terminal methylation motif K02458,K02671 - - 0.00003632 53.0
BYD1_k127_4421353_9 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0005123 43.0
BYD1_k127_4421700_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 431.0
BYD1_k127_4421700_1 - - - - 0.0000000000000000000000000000000000000000000000000000006613 215.0
BYD1_k127_4421700_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0003718 44.0
BYD1_k127_4429426_0 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001339 254.0
BYD1_k127_4429426_1 Trypsin-like peptidase domain - - - 0.0000000000000000000000000000000000000000000000000000000000001665 219.0
BYD1_k127_4429426_2 Bacterial regulatory proteins, luxR family - - - 0.0000000000000000000000000000000000000000006552 166.0
BYD1_k127_4467341_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005276 327.0
BYD1_k127_4467341_1 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.000000000000000009524 96.0
BYD1_k127_4467341_2 PFAM YbbR-like protein - - - 0.00000000000002677 85.0
BYD1_k127_4480994_0 FeS assembly protein SufB K07033,K09014 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009536,GO:0009842,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0071840 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000774 526.0
BYD1_k127_4480994_2 Transcriptional regulator - - - 0.000000000000000000008116 97.0
BYD1_k127_4500834_0 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001212 278.0
BYD1_k127_4500834_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.000000000000000000000000000000001779 148.0
BYD1_k127_4500834_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.00000000000000000000000000000183 133.0
BYD1_k127_4500834_3 Acyltransferase K00655 - 2.3.1.51 0.000000000000002859 85.0
BYD1_k127_4500834_4 lipid kinase activity - - - 0.00001877 56.0
BYD1_k127_4503848_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 1.128e-203 668.0
BYD1_k127_4503848_1 Protein of unknown function (DUF1349) K01183 - 3.2.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 414.0
BYD1_k127_4503848_2 serine-type peptidase activity K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005744 376.0
BYD1_k127_4503848_3 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000001101 208.0
BYD1_k127_4503848_4 CYTH K05873 - 4.6.1.1 0.000000000000000000000000000001858 128.0
BYD1_k127_4503848_5 YceI-like domain - - - 0.000000000000000000002597 103.0
BYD1_k127_4503848_6 membrane organization K07277 - - 0.00001581 48.0
BYD1_k127_453033_0 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001166 276.0
BYD1_k127_453033_1 Aldehyde dehydrogenase family K00294,K13821 - 1.2.1.88,1.5.5.2 0.00000000000000000000000000000000344 129.0
BYD1_k127_453033_2 DinB family - - - 0.000000000000007835 85.0
BYD1_k127_453033_3 - - - - 0.00000000002707 70.0
BYD1_k127_4565659_0 Domain of unknown function (DUF1998) K06877 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 527.0
BYD1_k127_4565659_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000002827 158.0
BYD1_k127_4565659_2 Exonuclease K07502 - - 0.000000000000000000000004052 119.0
BYD1_k127_4565659_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000005963 58.0
BYD1_k127_4572002_0 Catalyzes the conversion of dihydroorotate to orotate K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 301.0
BYD1_k127_4572002_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.00000000000000000000000000000000000000836 163.0
BYD1_k127_4582160_0 PFAM Polysaccharide deacetylase K11931,K21478 - - 0.00000000000000000000001344 113.0
BYD1_k127_4582160_1 - - - - 0.0000005005 59.0
BYD1_k127_4616503_0 - - - - 0.0000000000000000000000000000000000000000000000000001278 190.0
BYD1_k127_4616503_1 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000008945 164.0
BYD1_k127_4616503_2 OsmC-like protein K07397 - - 0.0000000000000000000000000000003512 128.0
BYD1_k127_4616503_3 Cupin domain - - - 0.0000000000000000000003481 103.0
BYD1_k127_4616503_4 Periplasmic Protein K08985 - - 0.0000000000000001477 87.0
BYD1_k127_4616503_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000008884 59.0
BYD1_k127_4632206_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378,K13380 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 606.0
BYD1_k127_4632206_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 309.0
BYD1_k127_4632206_2 Serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000008695 198.0
BYD1_k127_4632206_3 NADH dehydrogenase (ubiquinone) activity K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.00000000000000000000000000000000000000005306 156.0
BYD1_k127_4662622_1 Beta-lactamase - - - 0.00000000000000005561 83.0
BYD1_k127_4662622_2 - - - - 0.00003285 55.0
BYD1_k127_4672141_0 Divergent polysaccharide deacetylase K09798 - - 0.00000000000000000000000000139 127.0
BYD1_k127_4676513_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 1.152e-245 777.0
BYD1_k127_4676513_1 GTP-binding protein TypA K06207 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 536.0
BYD1_k127_4676513_2 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 387.0
BYD1_k127_4676513_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 304.0
BYD1_k127_4676513_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007638 261.0
BYD1_k127_4676513_5 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.00000000000000000000000000000000000000000000000000008217 197.0
BYD1_k127_4676513_6 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000001623 192.0
BYD1_k127_4685581_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002903 291.0
BYD1_k127_4685581_1 ASPIC and UnbV - - - 0.00000000000000000000000000000000002426 156.0
BYD1_k127_4685581_2 Glucose / Sorbosone dehydrogenase - - - 0.0003865 49.0
BYD1_k127_4685581_3 Alpha-amylase domain K01176 - 3.2.1.1 0.0004206 54.0
BYD1_k127_4688392_0 Ribosomal protein S1 K02945,K03527,K12132 GO:0005575,GO:0005576,GO:0018995,GO:0020003,GO:0030430,GO:0033643,GO:0033646,GO:0033655,GO:0043226,GO:0043227,GO:0043230,GO:0043656,GO:0043657,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0065010 1.17.7.4,2.7.11.1 1.115e-224 711.0
BYD1_k127_4688392_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000001612 227.0
BYD1_k127_4688392_2 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000003036 204.0
BYD1_k127_4688392_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000008662 190.0
BYD1_k127_4688392_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000009655 146.0
BYD1_k127_4688392_5 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000001913 136.0
BYD1_k127_4698040_0 Type III flagellar switch regulator (C-ring) FliN C-term K02417 - - 0.00000000000001212 84.0
BYD1_k127_4698040_1 PA14 domain - - - 0.0000002241 59.0
BYD1_k127_4698040_2 Trehalose utilisation K01179 - 3.2.1.4 0.00007414 54.0
BYD1_k127_4701519_0 TIGRFAM type VI secretion protein, EvpB VC_A0108 family K11900 - - 2.485e-195 629.0
BYD1_k127_4701519_1 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007397 560.0
BYD1_k127_4701519_2 PFAM phenylalanine histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 328.0
BYD1_k127_4701519_3 Protein conserved in bacteria K11902 - - 0.00000000000000000000000000000000000000000000000000002263 201.0
BYD1_k127_4701519_4 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.0000000000000000000000000000000000000000000000000005633 190.0
BYD1_k127_4701519_5 PTS IIA-like nitrogen-regulatory protein PtsN K02806 - - 0.00000000000000000001009 98.0
BYD1_k127_4701519_6 Type VI secretion system effector, Hcp K11903 - - 0.0000000000000000004725 93.0
BYD1_k127_4701519_7 Type VI secretion system effector, Hcp - - - 0.00005601 54.0
BYD1_k127_4716511_0 Ftsk_gamma K03466 GO:0000003,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0019954,GO:0030436,GO:0031323,GO:0031326,GO:0032502,GO:0043934,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 475.0
BYD1_k127_4716511_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 375.0
BYD1_k127_4729560_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 379.0
BYD1_k127_4729560_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007833 257.0
BYD1_k127_4729560_2 NAD(P)H-binding K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000007128 186.0
BYD1_k127_4752048_0 Tetratricopeptide repeat protein - - - 0.00000000000000000000000000000000000000001787 171.0
BYD1_k127_4778366_0 Propeptide_C25 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 439.0
BYD1_k127_4778366_1 Evidence 5 No homology to any previously reported sequences K09607 - - 0.00000000000000000000000000000000000000000000000001798 199.0
BYD1_k127_4778366_2 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000334 142.0
BYD1_k127_4788792_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 411.0
BYD1_k127_4788792_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0030312,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000003884 238.0
BYD1_k127_4788792_2 Helix-hairpin-helix domain K02347 - - 0.0000000000000000000000000000000000000000000000005028 180.0
BYD1_k127_4788792_3 N-acetylglucosaminylinositol deacetylase activity K22135 - - 0.0000000000000000000000004361 113.0
BYD1_k127_4850228_0 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002322 339.0
BYD1_k127_4850228_1 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000517 229.0
BYD1_k127_4850228_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000003521 196.0
BYD1_k127_487109_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 326.0
BYD1_k127_487109_1 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000003988 198.0
BYD1_k127_487109_2 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000005658 188.0
BYD1_k127_487109_3 Domain of unknown function (DUF814) - - - 0.000000000000000000000000000000001816 146.0
BYD1_k127_4893061_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000003611 149.0
BYD1_k127_4893061_1 DNA polymerase X K02347 - - 0.00000000000000000000000002583 116.0
BYD1_k127_4893061_2 - - - - 0.00000000000000000001069 99.0
BYD1_k127_4893061_3 - - - - 0.000000000000000001626 85.0
BYD1_k127_4893061_5 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 4.2.1.33,4.2.1.35 0.0006968 44.0
BYD1_k127_4916120_0 COG2133 Glucose sorbosone dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 424.0
BYD1_k127_4922360_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 466.0
BYD1_k127_4922360_1 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000004452 227.0
BYD1_k127_4922360_2 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000005213 233.0
BYD1_k127_4922360_3 chaperone-mediated protein folding - - - 0.00000000000000000000000000008891 127.0
BYD1_k127_4943171_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 550.0
BYD1_k127_4943171_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005633 539.0
BYD1_k127_4943171_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007044 489.0
BYD1_k127_4943171_3 MreB/Mbl protein K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 434.0
BYD1_k127_4943171_4 Trypsin K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000004698 192.0
BYD1_k127_4943171_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000001961 182.0
BYD1_k127_4943171_6 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.00000000000000000000000000000000000000002161 164.0
BYD1_k127_4943171_7 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000001402 125.0
BYD1_k127_4943171_8 shape-determining protein MreD K03571 - - 0.000000003461 66.0
BYD1_k127_4948440_0 PFAM Histone deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008284 280.0
BYD1_k127_4948440_1 acylphosphatase activity K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.00000000000000000000003254 103.0
BYD1_k127_4948440_2 Protein of unknown function, DUF393 - - - 0.0000000000000009321 82.0
BYD1_k127_4948440_3 extracellular matrix structural constituent - - - 0.00000000000003521 77.0
BYD1_k127_4949254_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 338.0
BYD1_k127_4949254_1 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000003199 248.0
BYD1_k127_4949254_2 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000001161 191.0
BYD1_k127_4949254_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000001147 142.0
BYD1_k127_4949254_4 Uncharacterized conserved protein (DUF2203) - - - 0.00000000000002041 79.0
BYD1_k127_4949254_5 Periplasmic copper-binding protein (NosD) - - - 0.000001353 61.0
BYD1_k127_495012_0 TonB-dependent Receptor Plug - - - 0.0000000000000000000000000000000000000000000000000000000000000000116 251.0
BYD1_k127_495012_1 - - - - 0.000001569 58.0
BYD1_k127_4951952_0 radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 323.0
BYD1_k127_4951952_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 308.0
BYD1_k127_4951952_2 water channel activity K02440,K06188,K09874 - - 0.00000000000000000000000000000000000000000000000000000000000000000002505 242.0
BYD1_k127_4951952_3 PFAM Peptidase M16 inactive domain K07263 - - 0.00000000000000177 85.0
BYD1_k127_5002978_0 Vitamin B12 dependent methionine synthase activation K00548 - 2.1.1.13 0.0 1328.0
BYD1_k127_5002978_1 RmuC domain protein K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002465 441.0
BYD1_k127_5002978_2 Psort location Cytoplasmic, score K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 362.0
BYD1_k127_5002978_3 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000004182 235.0
BYD1_k127_5002978_4 - - - - 0.0000000000000000000000000000000000000000225 160.0
BYD1_k127_5002978_5 PFAM membrane protein of K08972 - - 0.0000000000000000000000002457 120.0
BYD1_k127_5002978_6 tail specific protease K08676 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.00054 51.0
BYD1_k127_5002978_7 Tetratricopeptide repeat - - - 0.0009644 52.0
BYD1_k127_502361_0 ATP:ADP antiporter activity K03301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 501.0
BYD1_k127_502361_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 377.0
BYD1_k127_502361_2 cyclic nucleotide binding K00384,K10914,K16922 - 1.8.1.9 0.000000000000000000000000000000000000000000000007331 184.0
BYD1_k127_502361_3 Belongs to the UPF0312 family - - - 0.000000000000000000000000001274 122.0
BYD1_k127_502361_4 YCII-related domain - - - 0.00000000000000000000000001957 116.0
BYD1_k127_502361_5 Tetratricopeptide repeat - - - 0.00004165 46.0
BYD1_k127_5035740_0 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000009895 156.0
BYD1_k127_5035740_1 repeat protein - - - 0.00000004398 64.0
BYD1_k127_5036688_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003213 286.0
BYD1_k127_5036688_1 NHL repeat - - - 0.00000000000000000000000000000000009304 151.0
BYD1_k127_5036688_2 membrane organization K07277 - - 0.0000000000000000000000000009217 131.0
BYD1_k127_5036688_3 - - - - 0.0000000000000000002318 99.0
BYD1_k127_5036688_4 Belongs to the peptidase S8 family K08651 - 3.4.21.66 0.00000000000000001748 97.0
BYD1_k127_5040213_0 COG1192 ATPases involved in chromosome partitioning K03496 GO:0008150,GO:0022603,GO:0042173,GO:0042174,GO:0043937,GO:0043939,GO:0045595,GO:0045596,GO:0048519,GO:0048523,GO:0050789,GO:0050793,GO:0050794,GO:0051093,GO:0065007 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002701 326.0
BYD1_k127_5040213_1 ParB-like nuclease domain K03497 GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005694,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0060187,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000322 250.0
BYD1_k127_5040213_2 - - - - 0.00000000000000000000000000000000001894 140.0
BYD1_k127_5040213_3 PFAM Peptidase M23 - - - 0.0000000000000000000000000000001197 134.0
BYD1_k127_5040213_4 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.00000000000000000000000005438 111.0
BYD1_k127_5040213_5 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000159 96.0
BYD1_k127_5040213_6 Polymer-forming cytoskeletal - - - 0.000000000000003165 84.0
BYD1_k127_5041442_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138,K18307 - - 0.0 1457.0
BYD1_k127_5041442_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 368.0
BYD1_k127_5041442_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000002518 183.0
BYD1_k127_5041442_3 DNA-binding transcription factor activity K06075 - - 0.00000000000000000000000278 108.0
BYD1_k127_5041442_4 PFAM Outer membrane efflux protein - - - 0.000000000000000000000019 115.0
BYD1_k127_5041442_5 FHA domain containing protein - - - 0.00000000000001794 83.0
BYD1_k127_5041442_6 amine dehydrogenase activity K12287 - - 0.0000000009404 66.0
BYD1_k127_5043818_0 ABC transporter K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000086 445.0
BYD1_k127_5043818_1 - - - - 0.0002673 53.0
BYD1_k127_5043818_2 IgA Peptidase M64 - - - 0.0009263 49.0
BYD1_k127_5065508_0 AIR synthase related protein, C-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 332.0
BYD1_k127_5065508_1 HD domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 299.0
BYD1_k127_5065508_2 - - - - 0.000000000001177 74.0
BYD1_k127_5080350_0 benzoyl-CoA reductase K04113 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 585.0
BYD1_k127_5080350_1 BadF/BadG/BcrA/BcrD ATPase family K04114 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003468 491.0
BYD1_k127_5080350_2 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003381 320.0
BYD1_k127_5080350_3 methyltransferase K15256 - - 0.0000000000000000000000000000000000000000000000000000000009946 212.0
BYD1_k127_5080350_4 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000004191 115.0
BYD1_k127_5080350_5 benzoyl-CoA reductase K04112 - 1.3.7.8 0.00000000000000000002579 91.0
BYD1_k127_5080350_6 Evidence 5 No homology to any previously reported sequences - - - 0.00000000006455 65.0
BYD1_k127_5088317_0 Probable RNA and SrmB- binding site of polymerase A K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 433.0
BYD1_k127_5088317_1 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.00000000006735 67.0
BYD1_k127_5161788_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 588.0
BYD1_k127_5161788_1 PFAM peptidase M48 Ste24p - - - 0.00001187 53.0
BYD1_k127_5163445_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 2.186e-278 881.0
BYD1_k127_5163445_1 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007193 391.0
BYD1_k127_5163445_2 Domain of unknown function (DUF4115) - - - 0.000002022 59.0
BYD1_k127_5180869_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 325.0
BYD1_k127_5180869_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 307.0
BYD1_k127_5180869_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000001674 226.0
BYD1_k127_5180869_3 Protein similar to CwfJ C-terminus 1 K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000069 193.0
BYD1_k127_5180869_4 Peptidylprolyl isomerase K01802,K03769,K03770 - 5.2.1.8 0.0000000000001542 73.0
BYD1_k127_5180869_5 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.000000000003674 70.0
BYD1_k127_5180869_6 PFAM Cell envelope-related transcriptional attenuator domain - - - 0.00003455 55.0
BYD1_k127_5180869_7 Domain of unknown function (DUF4321) - - - 0.0003393 47.0
BYD1_k127_5182787_0 oligoendopeptidase F K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006288 586.0
BYD1_k127_5182787_1 Participates in initiation and elongation during chromosome replication - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004576 388.0
BYD1_k127_5182787_2 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006791 261.0
BYD1_k127_5182787_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides - - - 0.0000000000000000000000000000000000000000006787 180.0
BYD1_k127_5195107_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 518.0
BYD1_k127_5195107_1 Lytic transglycosylase catalytic K08309 - - 0.000000000000000000000000000000000000000053 175.0
BYD1_k127_5195107_2 phytol kinase activity K16368 GO:0003674,GO:0003824,GO:0004143,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006629,GO:0006644,GO:0006650,GO:0006654,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019637,GO:0030176,GO:0031224,GO:0031227,GO:0031984,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046473,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:0098827,GO:1901576 2.7.1.174 0.00000000005326 75.0
BYD1_k127_5195107_3 NHL repeat K12035 GO:0000003,GO:0000082,GO:0000278,GO:0000932,GO:0001708,GO:0001838,GO:0001841,GO:0001843,GO:0002009,GO:0002164,GO:0002165,GO:0002168,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005912,GO:0005924,GO:0005927,GO:0006139,GO:0006396,GO:0006401,GO:0006402,GO:0006417,GO:0006464,GO:0006725,GO:0006807,GO:0007049,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007399,GO:0007517,GO:0007548,GO:0008150,GO:0008152,GO:0008283,GO:0008543,GO:0008544,GO:0009056,GO:0009057,GO:0009653,GO:0009719,GO:0009790,GO:0009791,GO:0009792,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009913,GO:0009957,GO:0009987,GO:0010033,GO:0010171,GO:0010172,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010586,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010720,GO:0014020,GO:0014070,GO:0016070,GO:0016071,GO:0016203,GO:0016331,GO:0016441,GO:0016458,GO:0016567,GO:0016740,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0019538,GO:0019787,GO:0019953,GO:0021915,GO:0022402,GO:0022407,GO:0022414,GO:0023052,GO:0030054,GO:0030055,GO:0030154,GO:0030155,GO:0030371,GO:0030674,GO:0030855,GO:0030856,GO:0031047,GO:0031050,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0032268,GO:0032269,GO:0032446,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033628,GO:0033632,GO:0034248,GO:0034249,GO:0034641,GO:0034655,GO:0034660,GO:0035148,GO:0035194,GO:0035195,GO:0035196,GO:0035198,GO:0035239,GO:0035278,GO:0035295,GO:0035770,GO:0036211,GO:0036464,GO:0040029,GO:0040033,GO:0040034,GO:0042127,GO:0042221,GO:0043009,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043331,GO:0043412,GO:0043487,GO:0043488,GO:0043900,GO:0043902,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044344,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044706,GO:0044770,GO:0044772,GO:0044843,GO:0045138,GO:0045165,GO:0045182,GO:0045595,GO:0045597,GO:0045604,GO:0045682,GO:0045935,GO:0045974,GO:0046483,GO:0046661,GO:0046700,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048598,GO:0048609,GO:0048646,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0050779,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051704,GO:0051716,GO:0051865,GO:0060090,GO:0060147,GO:0060148,GO:0060255,GO:0060281,GO:0060282,GO:0060284,GO:0060378,GO:0060429,GO:0060538,GO:0060562,GO:0060606,GO:0060964,GO:0060966,GO:0060968,GO:0061013,GO:0061014,GO:0061061,GO:0061157,GO:0061158,GO:0061630,GO:0061659,GO:0061980,GO:0065007,GO:0065008,GO:0070161,GO:0070647,GO:0070848,GO:0070887,GO:0070918,GO:0071310,GO:0071359,GO:0071363,GO:0071407,GO:0071495,GO:0071704,GO:0071774,GO:0072089,GO:0072175,GO:0080090,GO:0090304,GO:0090598,GO:0090727,GO:0097159,GO:0140096,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901698,GO:1901699,GO:1903047,GO:1903311,GO:1903313,GO:1905879,GO:1905881,GO:1990124,GO:1990904,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000241,GO:2000243,GO:2000637 2.3.2.27 0.000000003234 70.0
BYD1_k127_5200559_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005892 284.0
BYD1_k127_5200559_1 peptidyl-tyrosine sulfation - - - 0.00000000000111 76.0
BYD1_k127_5210216_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000001478 135.0
BYD1_k127_5210216_1 Glycosyl transferase family 21 - - - 0.00000000000000000000005336 112.0
BYD1_k127_5210216_2 Tetratricopeptide repeat - - - 0.0003463 53.0
BYD1_k127_521241_0 Transketolase, thiamine diphosphate binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 474.0
BYD1_k127_521241_1 Deoxyhypusine synthase K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 370.0
BYD1_k127_521241_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000002098 251.0
BYD1_k127_521241_3 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000004988 206.0
BYD1_k127_521241_4 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000009281 83.0
BYD1_k127_521241_5 - - - - 0.000000000004499 72.0
BYD1_k127_521241_6 sigma factor antagonist activity K04757 - 2.7.11.1 0.00000000007111 70.0
BYD1_k127_522244_0 Short chain fatty acid transporter K02106 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 402.0
BYD1_k127_522244_1 Glycosyltransferase like family 2 K16698 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004376 248.0
BYD1_k127_5234519_0 methylmalonyl-CoA mutase C-terminal K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000007349 202.0
BYD1_k127_5234519_1 HAD-hyrolase-like - - - 0.00000000000000000000000000000000000000000000000000002275 199.0
BYD1_k127_5234519_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000001565 154.0
BYD1_k127_5234519_3 enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000001958 106.0
BYD1_k127_5234519_4 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000007448 53.0
BYD1_k127_5272967_0 chlorophyll binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 390.0
BYD1_k127_5272967_1 Ribosomal protein L35 K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000002251 83.0
BYD1_k127_5272967_2 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000009923 59.0
BYD1_k127_5280853_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 0.0000000000000000000000000000000008627 149.0
BYD1_k127_5280853_1 Belongs to the ompA family - - - 0.0000000000001602 84.0
BYD1_k127_5280853_2 Belongs to the sulfur carrier protein TusA family K04085 - - 0.0000000000004649 74.0
BYD1_k127_5294138_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 370.0
BYD1_k127_5294138_1 carbamoyl transferase, NodU family K00612 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 370.0
BYD1_k127_5298447_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 365.0
BYD1_k127_5298447_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01840,K03431,K15778 - 5.4.2.10,5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 370.0
BYD1_k127_5298447_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016020,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:0071944,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 0.0000000000000000601 94.0
BYD1_k127_5298447_3 - - - - 0.0001278 45.0
BYD1_k127_530060_0 membrane protein (homolog of Drosophila rhomboid) K19225 - 3.4.21.105 0.00000000000000000000000000000001468 143.0
BYD1_k127_530060_1 - - - - 0.00000006083 61.0
BYD1_k127_530060_2 Vacuole effluxer Atg22 like - - - 0.0008836 48.0
BYD1_k127_5336006_0 Carbon starvation protein K06200 - - 3.847e-219 692.0
BYD1_k127_5336006_1 Amino acid permease - - - 3.693e-199 640.0
BYD1_k127_5336006_2 DNA repair protein K03584 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000001676 110.0
BYD1_k127_5336006_3 - - - - 0.000000000000004141 81.0
BYD1_k127_5365404_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000966 280.0
BYD1_k127_5365404_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000168 204.0
BYD1_k127_5365404_2 Domain of unknown function (DUF374) K02527,K09778 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000008837 156.0
BYD1_k127_5365404_3 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000002146 146.0
BYD1_k127_5374801_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000002036 241.0
BYD1_k127_5374801_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.00000000000000000000000000000000000000000000000001266 195.0
BYD1_k127_5385639_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 559.0
BYD1_k127_5385639_1 Protein kinase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004441 355.0
BYD1_k127_5385639_2 imidazolonepropionase activity - - - 0.00000000000000000000000000000000000000000000000000000000003367 225.0
BYD1_k127_5385639_3 Pyridoxal-phosphate dependent enzyme - - - 0.00000000000000000000000000000000000000000000197 166.0
BYD1_k127_5385639_4 Calcium/calmodulin dependent protein kinase II association domain - - - 0.000000000000000000989 92.0
BYD1_k127_5385639_5 Beta-lactamase - - - 0.0000000000000002494 93.0
BYD1_k127_5388593_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 351.0
BYD1_k127_5388593_3 Surface antigen - - - 0.00002595 57.0
BYD1_k127_541512_0 Male sterility protein K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000001231 261.0
BYD1_k127_541512_1 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000001513 140.0
BYD1_k127_541512_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K03955 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006732,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016053,GO:0016226,GO:0018130,GO:0019637,GO:0019752,GO:0019842,GO:0022607,GO:0031163,GO:0031177,GO:0031974,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044571,GO:0044620,GO:0046394,GO:0046467,GO:0046483,GO:0046493,GO:0048037,GO:0051186,GO:0051188,GO:0051192,GO:0070013,GO:0071704,GO:0071840,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901360,GO:1901362,GO:1901576,GO:1903509 - 0.00001653 53.0
BYD1_k127_541512_3 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0001134 46.0
BYD1_k127_5433802_0 elongation factor Tu domain 2 protein K02355 - - 2.408e-194 628.0
BYD1_k127_5433802_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 418.0
BYD1_k127_5433802_10 COG NOG15344 non supervised orthologous group - - - 0.000000000000000001834 85.0
BYD1_k127_5433802_11 Protein of unknown function (DUF2905) - - - 0.000000000000000006451 85.0
BYD1_k127_5433802_12 - - - - 0.0000000000000005767 78.0
BYD1_k127_5433802_13 - - - - 0.0000000000000005805 81.0
BYD1_k127_5433802_14 the current gene model (or a revised gene model) may contain one or more premature stops and or frameshifts - - - 0.000000000002818 69.0
BYD1_k127_5433802_16 - - - - 0.00001661 47.0
BYD1_k127_5433802_18 non supervised orthologous group - - - 0.0007058 43.0
BYD1_k127_5433802_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 318.0
BYD1_k127_5433802_3 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000004632 192.0
BYD1_k127_5433802_4 COG NOG14600 non supervised orthologous group - - - 0.00000000000000000000000000000000000000003749 152.0
BYD1_k127_5433802_5 COG NOG15344 non supervised orthologous group - - - 0.000000000000000000000000000000000001712 140.0
BYD1_k127_5433802_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000002171 140.0
BYD1_k127_5433802_7 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.000000000000000000000000000000005707 134.0
BYD1_k127_5433802_9 Unextendable partial coding region - - - 0.0000000000000000003157 87.0
BYD1_k127_5457996_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.0000000000000000000000000000000000000000000000000000000000005101 233.0
BYD1_k127_5457996_1 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000003935 73.0
BYD1_k127_5460943_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 455.0
BYD1_k127_5460943_1 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 312.0
BYD1_k127_5460943_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000004724 114.0
BYD1_k127_5460943_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000213 92.0
BYD1_k127_5460943_4 Biotin-lipoyl like K02005 - - 0.000000001226 64.0
BYD1_k127_5532702_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000046 458.0
BYD1_k127_5532702_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 431.0
BYD1_k127_5532702_2 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008053 350.0
BYD1_k127_5532702_3 Coenzyme A transferase K01027,K01028,K01034 - 2.8.3.5,2.8.3.8,2.8.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 304.0
BYD1_k127_5532702_4 PFAM Coenzyme A transferase K01029 - 2.8.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006826 275.0
BYD1_k127_5532702_5 TIGRFAM Methylmalonyl-CoA mutase, C-terminal K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000002783 180.0
BYD1_k127_5532702_6 cobalamin binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000681 172.0
BYD1_k127_5532702_7 SPTR Peptidase S8 and S53 subtilisin kexin sedolisin K14645 - - 0.0006325 50.0
BYD1_k127_5602634_0 PFAM Adenosine AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 438.0
BYD1_k127_5602634_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006784 260.0
BYD1_k127_5602634_2 Domain of unknown function (DUF1848) - - - 0.00000000000000000000000000000000000000001019 160.0
BYD1_k127_5627091_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000001524 262.0
BYD1_k127_5627091_1 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000000000001716 225.0
BYD1_k127_5627091_2 PPIC-type PPIASE domain K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000001358 177.0
BYD1_k127_5627091_3 peptidylprolyl isomerase K03769,K07533 - 5.2.1.8 0.000000000000000000000002424 119.0
BYD1_k127_5627091_4 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K01802,K03769 - 5.2.1.8 0.000000000002014 80.0
BYD1_k127_5633887_0 Glycosyltransferase like family 2 K11936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004147 454.0
BYD1_k127_566709_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000008005 211.0
BYD1_k127_566709_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000002395 158.0
BYD1_k127_566709_2 PFAM Class I peptide chain release factor K15034 - - 0.000000000000000000000000000000000000009272 150.0
BYD1_k127_566709_3 Outer membrane protein beta-barrel domain - - - 0.000000000000000000001488 102.0
BYD1_k127_5684829_0 guanyl-nucleotide exchange factor activity K01179,K03929,K09612,K12287,K19701,K19702 GO:0003674,GO:0003824,GO:0004177,GO:0005575,GO:0005623,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0036211,GO:0042597,GO:0043170,GO:0043412,GO:0043687,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.2.1.4,3.4.11.10,3.4.11.24,3.4.11.6 0.000003259 60.0
BYD1_k127_5684829_1 Two component regulator propeller - - - 0.0003673 53.0
BYD1_k127_5686391_0 tRNA synthetases class II (D, K and N) K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 575.0
BYD1_k127_5686391_1 Asparaginyl-tRNA synthetase K01893 GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 0.000000000002964 66.0
BYD1_k127_5686391_2 peptidyl-tyrosine sulfation - - - 0.0000000002038 70.0
BYD1_k127_5686391_3 Glycosyl transferase family 41 - - - 0.0000005922 63.0
BYD1_k127_568772_0 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 397.0
BYD1_k127_568772_1 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000002527 235.0
BYD1_k127_568772_2 Phage integrase, N-terminal SAM-like domain K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000001175 229.0
BYD1_k127_568772_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000002446 177.0
BYD1_k127_568772_4 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000002165 167.0
BYD1_k127_568772_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000002783 138.0
BYD1_k127_5690056_0 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000004291 211.0
BYD1_k127_5690056_1 HMGL-like K01640 - 4.1.3.4 0.0000000003326 62.0
BYD1_k127_5692095_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 6.593e-249 782.0
BYD1_k127_5692095_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 563.0
BYD1_k127_5692095_10 Parallel beta-helix repeats - - - 0.00003872 57.0
BYD1_k127_5692095_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 541.0
BYD1_k127_5692095_3 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 509.0
BYD1_k127_5692095_4 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006808 407.0
BYD1_k127_5692095_5 PFAM Nucleotidyl transferase K00971 - 2.7.7.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 331.0
BYD1_k127_5692095_6 PFAM Nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000008827 169.0
BYD1_k127_5692095_7 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000002958 122.0
BYD1_k127_5692095_8 colicin V production K03558 - - 0.00000000001363 73.0
BYD1_k127_5692095_9 Tetratricopeptide repeat - - - 0.00000000466 69.0
BYD1_k127_5697007_0 Ser Thr phosphatase family protein K03269 - 3.6.1.54 0.0000000000000000000000000000000000005123 151.0
BYD1_k127_5697007_1 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000006255 102.0
BYD1_k127_5697007_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000001222 79.0
BYD1_k127_5748388_0 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000002035 210.0
BYD1_k127_5748388_1 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.00000000269 69.0
BYD1_k127_5748388_2 DNA polymerase III K02341 - 2.7.7.7 0.00002804 56.0
BYD1_k127_5750685_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1023.0
BYD1_k127_5750685_1 Surface antigen K07277 GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 430.0
BYD1_k127_5750685_2 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000001915 93.0
BYD1_k127_5750685_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00003383 49.0
BYD1_k127_5752035_0 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 548.0
BYD1_k127_5752035_1 - - - - 0.00000000000000000000000000000000000000000000000000000000002382 210.0
BYD1_k127_5752035_2 lactoylglutathione lyase activity K08234 - - 0.000000000000000000000000000000000000000000001458 168.0
BYD1_k127_5752035_3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.0000000000000000000000000000000000000001907 154.0
BYD1_k127_5752035_4 nUDIX hydrolase - - - 0.000000000000000000000000000000000002473 141.0
BYD1_k127_5752035_5 TOBE domain - - - 0.0000000000000000004173 92.0
BYD1_k127_5754516_0 Serine threonine protein kinase K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004213 456.0
BYD1_k127_5801029_0 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000007284 239.0
BYD1_k127_5801029_1 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000003223 258.0
BYD1_k127_5801029_2 PFAM peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000004999 180.0
BYD1_k127_5801029_3 Transmembrane protein 260 - - - 0.000000000000000000000000000004188 139.0
BYD1_k127_5801029_4 SMART Tetratricopeptide domain protein - - - 0.00000000000001869 88.0
BYD1_k127_5801029_5 Evidence 5 No homology to any previously reported sequences - - - 0.000000007151 67.0
BYD1_k127_5801175_0 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008322 450.0
BYD1_k127_5801175_1 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 362.0
BYD1_k127_5818016_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000002912 252.0
BYD1_k127_5818016_1 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000008476 168.0
BYD1_k127_5818016_2 cellulose binding - - - 0.00000000000000000000000000000009333 140.0
BYD1_k127_5830572_0 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000003071 187.0
BYD1_k127_5830572_1 Histidine kinase - - - 0.0000000000000000000000003306 119.0
BYD1_k127_5838408_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000218 419.0
BYD1_k127_5838408_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K07752 - 3.4.17.18,3.4.17.22 0.00000000000000000000000000000000000000000000000000000000000000000000002122 257.0
BYD1_k127_5938323_0 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009317 466.0
BYD1_k127_5938323_1 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000001168 200.0
BYD1_k127_5938323_2 Redoxin - - - 0.000000000000000000939 100.0
BYD1_k127_5956168_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000001843 186.0
BYD1_k127_5966764_0 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000004171 193.0
BYD1_k127_5966764_1 Ribonuclease H K03469 - 3.1.26.4 0.000000000000000000000000000000000005886 145.0
BYD1_k127_5966764_2 C4-type zinc ribbon domain K07164,K22391 - 3.5.4.16 0.00000000000000891 84.0
BYD1_k127_5989149_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 403.0
BYD1_k127_5989149_1 TonB-dependent receptor - - - 0.00000008074 62.0
BYD1_k127_5993735_0 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001033 271.0
BYD1_k127_5993735_1 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001301 214.0
BYD1_k127_5995105_0 5' nucleotidase family - - - 7.729e-197 628.0
BYD1_k127_5995105_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000938 133.0
BYD1_k127_5995105_2 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000007167 105.0
BYD1_k127_5995105_3 SpoIVB peptidase S55 - - - 0.0004734 47.0
BYD1_k127_6006083_0 C-terminal, D2-small domain, of ClpB protein K11907 - - 5.518e-313 987.0
BYD1_k127_6006083_1 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008016 530.0
BYD1_k127_6006083_2 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001949 262.0
BYD1_k127_6006083_3 Pfam:T6SS_VasB K11895 - - 0.00000000000000000000000000000000000000000000000000000000000000000003638 246.0
BYD1_k127_6006083_4 Domain of unknown function (DUF4150) - - - 0.0000000000000000000000000000000000000009088 167.0
BYD1_k127_6006083_5 synthase K00647 - 2.3.1.41 0.000000000000000000000000000000000004196 154.0
BYD1_k127_6006083_7 Type VI secretion K11896 - - 0.0000000000000000000000000000009971 130.0
BYD1_k127_6006083_8 peptidyl-tyrosine sulfation - - - 0.00000000000000000002183 106.0
BYD1_k127_6006083_9 - - - - 0.000001302 55.0
BYD1_k127_6014886_0 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000852 249.0
BYD1_k127_6014886_1 Aconitase C-terminal domain K01681 - 4.2.1.3 0.0000000000000000000000000000000000000000000000000000001494 201.0
BYD1_k127_6014886_2 Type II secretion system K12511 - - 0.0000000000000000000000000000000000000000000000000001383 193.0
BYD1_k127_6014886_3 Methyltransferase domain - - - 0.00000000001217 76.0
BYD1_k127_6024949_0 Thymidine kinase K00857 - 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000005695 223.0
BYD1_k127_6024949_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000004449 188.0
BYD1_k127_6024949_2 YGGT family K02221 - - 0.000000000000000000000007059 103.0
BYD1_k127_6024949_3 Protein of unknown function (DUF3307) - - - 0.000000000000000000000009158 111.0
BYD1_k127_6024949_4 SatD family (SatD) - - - 0.00000000000000000001118 100.0
BYD1_k127_6024949_5 Thioesterase-like superfamily K01075 - 3.1.2.23 0.00000000000002255 79.0
BYD1_k127_6024949_6 PFAM DivIVA protein K04074 - - 0.000000000009615 76.0
BYD1_k127_6039396_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1196.0
BYD1_k127_6039396_1 Putative neutral zinc metallopeptidase K06973 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002159 246.0
BYD1_k127_6039396_2 Haemolysin-type calcium-binding - - - 0.00000000000000000000000000000000000000000001907 186.0
BYD1_k127_6039396_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000301 87.0
BYD1_k127_6039396_4 Hsp20/alpha crystallin family K13993 - - 0.000001657 51.0
BYD1_k127_6039396_5 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00007384 56.0
BYD1_k127_6042258_0 virion core protein (lumpy skin disease virus) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 426.0
BYD1_k127_6042258_1 arylsulfatase A - - - 0.000000000000000000843 90.0
BYD1_k127_6042258_2 Transcription factor zinc-finger - - - 0.0002926 46.0
BYD1_k127_6059223_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000008943 175.0
BYD1_k127_6059223_1 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000003908 73.0
BYD1_k127_6059223_2 TPR Domain containing protein K12600 - - 0.000000006159 67.0
BYD1_k127_6063564_0 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 370.0
BYD1_k127_6063564_1 lipopolysaccharide transport protein B ATP-binding component of ABC superfamily K01990,K06861 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015920,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0032991,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043190,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098533,GO:0098796,GO:0098797,GO:1901264,GO:1901505,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 316.0
BYD1_k127_6063564_2 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 308.0
BYD1_k127_6063564_3 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000003526 130.0
BYD1_k127_6063564_4 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000003776 119.0
BYD1_k127_6063564_5 PTS HPr component phosphorylation site K11189 - - 0.00000000000000000002575 94.0
BYD1_k127_6063564_6 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000009194 55.0
BYD1_k127_6063564_7 Lipopolysaccharide-assembly, LptC-related - - - 0.0001506 51.0
BYD1_k127_6078507_0 Glycosyl transferases group 1 K13668 - 2.4.1.346 0.000000000000000000000000111 121.0
BYD1_k127_6078507_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000339 65.0
BYD1_k127_6082437_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 540.0
BYD1_k127_6082437_1 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.00000000000000000000000000000000000004253 145.0
BYD1_k127_6082842_0 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008725 382.0
BYD1_k127_6082842_1 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 354.0
BYD1_k127_6082842_2 ABC transporter, ATP-binding protein K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 314.0
BYD1_k127_6082842_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005178 297.0
BYD1_k127_6082842_4 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000001389 191.0
BYD1_k127_6082842_5 divalent heavy-metal cations transporter - - - 0.00000000000000000000000000000000007478 143.0
BYD1_k127_6082842_6 Receptor family ligand binding region - - - 0.00000000000000000001583 94.0
BYD1_k127_6082842_7 to SP P29212 GB L02649 GB X70994 PID 581070 GB U00096 percent identity K00666,K01897 - 6.2.1.3 0.00000000000007886 72.0
BYD1_k127_6083722_0 Acyl-CoA dehydrogenase, C-terminal domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 383.0
BYD1_k127_6083722_1 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000001054 216.0
BYD1_k127_6083722_2 Amidinotransferase K01478 - 3.5.3.6 0.00000000000000006736 80.0
BYD1_k127_6098441_0 Serine protease with a broad substrate specificity K17734 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005509,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 - 0.0000000000000000004662 103.0
BYD1_k127_6098441_1 extracellular matrix structural constituent - - - 0.00000000002298 78.0
BYD1_k127_6138410_0 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 1.194e-267 854.0
BYD1_k127_6138410_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004547 276.0
BYD1_k127_6165154_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.976e-264 824.0
BYD1_k127_6165154_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 473.0
BYD1_k127_6165154_2 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 438.0
BYD1_k127_6165154_3 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000004349 246.0
BYD1_k127_6165154_4 dTDP biosynthetic process K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000005751 179.0
BYD1_k127_6178392_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 1.552e-208 672.0
BYD1_k127_6178392_1 Participates in both transcription termination and antitermination K02600 GO:0001000,GO:0001121,GO:0001125,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006353,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0019904,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043175,GO:0043244,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0070063,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 385.0
BYD1_k127_6178392_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000001165 98.0
BYD1_k127_6178392_3 Protein of unknown function (DUF503) K09764 - - 0.000000000002035 70.0
BYD1_k127_6178392_4 PFAM ribosomal protein L7Ae L30e S12e Gadd45 - - - 0.0000007649 56.0
BYD1_k127_6180394_0 polyribonucleotide nucleotidyltransferase activity K00962 GO:0000166,GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016020,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0017076,GO:0019001,GO:0019222,GO:0019439,GO:0030312,GO:0030551,GO:0032553,GO:0032555,GO:0032561,GO:0034641,GO:0034655,GO:0035438,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 494.0
BYD1_k127_6180394_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000001637 236.0
BYD1_k127_6180394_2 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0031123,GO:0031124,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043631,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000005295 130.0
BYD1_k127_6186719_0 - - - - 0.000000000000000000000000000000000000000388 157.0
BYD1_k127_6186719_1 FMN_bind - - - 0.00000000000000000000000000000000000000339 154.0
BYD1_k127_6186719_2 protein flavinylation K03734 - 2.7.1.180 0.000000000000000000000000000001759 133.0
BYD1_k127_6191762_0 protein tyrosine kinase activity - - - 0.000000000000000000002496 104.0
BYD1_k127_6191762_1 glycosyl transferase family - - - 0.00000000000000001533 94.0
BYD1_k127_6191762_2 Type II secretory pathway component ExeA K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000005515 58.0
BYD1_k127_6192929_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 565.0
BYD1_k127_6198155_0 Belongs to the ComB family K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.00000000000000000000000000000000000007375 150.0
BYD1_k127_6217878_0 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.00000000000000000000000000000000000000000000000000000000327 212.0
BYD1_k127_6217878_1 Bacterial membrane protein, YfhO - - - 0.000000000000000000000000000000005343 144.0
BYD1_k127_6217878_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000007908 60.0
BYD1_k127_6226693_0 Male sterility protein K01710,K08678,K21211 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 428.0
BYD1_k127_6226693_1 PFAM transferase hexapeptide repeat containing protein - - - 0.000000000000000000000000000000000000000000004345 170.0
BYD1_k127_6233646_0 MutL protein K00854 - 2.7.1.17 3.706e-244 765.0
BYD1_k127_6233646_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 601.0
BYD1_k127_6233646_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004994 384.0
BYD1_k127_6233646_3 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 357.0
BYD1_k127_6233646_4 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.000000000000000000000000000000000000000000001498 170.0
BYD1_k127_6233646_5 - - - - 0.0000000000000002008 85.0
BYD1_k127_6233646_6 - - - - 0.000003663 60.0
BYD1_k127_6276953_0 cyclopropane-fatty-acyl-phospholipid synthase K00574,K20238 - 2.1.1.317,2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 357.0
BYD1_k127_6276953_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000001147 202.0
BYD1_k127_6276953_2 4-amino-4-deoxy-L-arabinose transferase activity K13687 - - 0.00000000000000000000000009743 124.0
BYD1_k127_6281094_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007717 540.0
BYD1_k127_6281094_1 Belongs to the TrpC family K01609,K13498 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 0.000000000000000000000002994 105.0
BYD1_k127_6281094_2 4-amino-4-deoxy-L-arabinose transferase activity K02277 - 1.9.3.1 0.000000000000000000001409 109.0
BYD1_k127_6305768_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 5.042e-202 647.0
BYD1_k127_6305768_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 536.0
BYD1_k127_6305768_10 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000007135 101.0
BYD1_k127_6305768_11 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000003518 97.0
BYD1_k127_6305768_12 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.000000000000008105 75.0
BYD1_k127_6305768_13 LVIVD repeat K01179 - 3.2.1.4 0.000002243 57.0
BYD1_k127_6305768_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 392.0
BYD1_k127_6305768_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 387.0
BYD1_k127_6305768_4 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 329.0
BYD1_k127_6305768_5 malonyl CoA-acyl carrier protein transacylase K00645,K15327,K15329,K15355,K15469 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 325.0
BYD1_k127_6305768_6 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006201 275.0
BYD1_k127_6305768_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.000000000000000000000000000000000000000000000000000006633 206.0
BYD1_k127_6305768_8 Redoxin K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000113 186.0
BYD1_k127_6305768_9 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.0000000000000000000000000000000000000000000001745 171.0
BYD1_k127_6309472_0 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002135 278.0
BYD1_k127_6309472_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000003184 156.0
BYD1_k127_6309472_2 Methyltransferase domain - - - 0.000000000000000000000000000000009744 128.0
BYD1_k127_6317640_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 310.0
BYD1_k127_6317640_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 282.0
BYD1_k127_6317640_2 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000000000000000000000000000000000000001261 235.0
BYD1_k127_6317640_3 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000002371 154.0
BYD1_k127_6360577_0 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 502.0
BYD1_k127_6360577_1 Transketolase, pyrimidine binding domain K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 451.0
BYD1_k127_6360577_2 e3 binding domain K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005635 393.0
BYD1_k127_6360577_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 350.0
BYD1_k127_6360577_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00161,K11381,K21416 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003587 306.0
BYD1_k127_6360577_5 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001188 287.0
BYD1_k127_6360577_6 synthetase (ADP forming), alpha K01905,K09181,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000002791 171.0
BYD1_k127_6360577_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000001141 143.0
BYD1_k127_6360577_8 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigK. ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut extracytoplasmically (site-1 protease, S1P), then within the membrane itself (site-2 protease, S2P, Rip1), while cytoplasmic proteases finish degrading the regulatory protein, liberating the sigma factor - - - 0.0000000003778 72.0
BYD1_k127_6365019_0 Cytochrome c biogenesis protein - - - 0.000000000000000006467 98.0
BYD1_k127_6365019_1 Cytochrome C assembly protein - - - 0.000000000001664 72.0
BYD1_k127_6367645_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 580.0
BYD1_k127_6367645_1 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 431.0
BYD1_k127_6367645_2 PhoH-like protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 321.0
BYD1_k127_6367645_3 PFAM Sulfite exporter TauE SafE K07090 - - 0.000000000000000000000000000000000000000001894 166.0
BYD1_k127_6367645_4 Tetratricopeptide repeat - - - 0.0000000000000000000002155 106.0
BYD1_k127_6367645_5 Bacterial transcriptional repressor C-terminal K16137 - - 0.000000000000002458 86.0
BYD1_k127_6367645_6 Lysin motif - - - 0.000000000005022 76.0
BYD1_k127_6367645_7 VanZ like family - - - 0.0000000001512 68.0
BYD1_k127_6367645_8 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K01489,K07042 - 3.5.4.5 0.000000001318 69.0
BYD1_k127_6367645_9 Helix-turn-helix domain - - - 0.000215 44.0
BYD1_k127_6399557_0 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 539.0
BYD1_k127_6399557_1 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000009455 215.0
BYD1_k127_6399557_2 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.00000000000000000000000000000000000000000000000000001041 192.0
BYD1_k127_6399557_3 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000003205 160.0
BYD1_k127_6399557_4 PrcB C-terminal - - - 0.000000000000000000000005419 107.0
BYD1_k127_6399557_5 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding - - - 0.000601 43.0
BYD1_k127_6400606_0 FAD dependent oxidoreductase K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000006791 195.0
BYD1_k127_6400606_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000001018 164.0
BYD1_k127_6400606_2 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000269 74.0
BYD1_k127_6407872_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000001749 189.0
BYD1_k127_6407872_1 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000001398 191.0
BYD1_k127_6407872_2 O-linked GlcNAc transferase-putative TPR-containing transmembrane protein - - - 0.0000000000000000000000000000000000000000001446 172.0
BYD1_k127_6412486_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 534.0
BYD1_k127_6412486_1 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 539.0
BYD1_k127_6412486_11 thiamine diphosphate biosynthetic process K03154 - - 0.00000005093 59.0
BYD1_k127_6412486_2 Biotin and Thiamin Synthesis associated domain K03150 - 4.1.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 408.0
BYD1_k127_6412486_3 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.8.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 351.0
BYD1_k127_6412486_4 arylsulfatase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004915 288.0
BYD1_k127_6412486_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000004881 222.0
BYD1_k127_6412486_6 Beta-lactamase superfamily domain K06136 - - 0.00000000000000000000000000000000000000000000000004612 188.0
BYD1_k127_6412486_7 Glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000004274 194.0
BYD1_k127_6412486_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000009574 124.0
BYD1_k127_6412486_9 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000004678 91.0
BYD1_k127_6437653_0 belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 1.449e-221 697.0
BYD1_k127_6437653_1 PFAM Glutamine synthetase, catalytic K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 472.0
BYD1_k127_6437653_2 Sulfatase - - - 0.0000000000000000005369 94.0
BYD1_k127_6437653_3 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.0000000000000000006135 101.0
BYD1_k127_6449505_0 KaiC - - - 0.00000000000000000000000000000000000000000000000002917 182.0
BYD1_k127_6449505_1 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000000000000000000003541 175.0
BYD1_k127_6449505_2 Psort location CytoplasmicMembrane, score K00368 - 1.7.2.1 0.0000000000000000000000000000000000000001294 169.0
BYD1_k127_6449505_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000001846 143.0
BYD1_k127_646010_0 flavin-nucleotide-binding protein structurally related to pyridoxine 5-phosphate oxidase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 390.0
BYD1_k127_646010_1 pyridoxamine 5-phosphate - - - 0.0000000000004594 71.0
BYD1_k127_6479767_0 NAD(P)H-binding K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000004226 148.0
BYD1_k127_6479767_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.000000000000000000002015 108.0
BYD1_k127_6491673_0 spore germination K07790 - - 0.0000000000000000000000000000000000000000000000000002666 196.0
BYD1_k127_6491673_1 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000009272 177.0
BYD1_k127_6491673_2 PFAM Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000004271 165.0
BYD1_k127_6491673_3 Putative adhesin - - - 0.00000000001784 75.0
BYD1_k127_6491673_4 Rdx family K07401 - - 0.000000008232 58.0
BYD1_k127_6491673_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00009376 55.0
BYD1_k127_650891_0 amino acid - - - 2.435e-233 739.0
BYD1_k127_650891_1 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 336.0
BYD1_k127_650891_2 Fe-S protein K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000008993 261.0
BYD1_k127_650891_3 SMART Tetratricopeptide domain protein - - - 0.000000000000000000000000000000000000000000000000000000001916 219.0
BYD1_k127_6525515_0 Type III secretion system lipoprotein chaperone (YscW) - - - 0.0000000000000000000000000000000000000000000000000000000000000001866 235.0
BYD1_k127_6525515_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000000000000000000000000000000000000000000000000000003793 207.0
BYD1_k127_6525515_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000636 67.0
BYD1_k127_6568419_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000139 223.0
BYD1_k127_6568419_1 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000001105 200.0
BYD1_k127_6568419_2 (Rhomboid) family K07059 - - 0.00000000000000000000000001042 111.0
BYD1_k127_6568419_3 Belongs to the Fur family K09825 - - 0.00000000000000000000000006955 113.0
BYD1_k127_6568419_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0000000000000000000001847 112.0
BYD1_k127_6585105_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000004759 190.0
BYD1_k127_6585105_1 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000000135 143.0
BYD1_k127_6585105_2 Rieske-like [2Fe-2S] domain - - - 0.00000000000000000008562 90.0
BYD1_k127_6585105_3 OsmC-like protein - - - 0.000000003532 65.0
BYD1_k127_6618753_0 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004204 359.0
BYD1_k127_6618753_1 - K12065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 333.0
BYD1_k127_6618753_2 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003894 263.0
BYD1_k127_6618753_3 C-terminal domain of alpha-glycerophosphate oxidase K00111 - 1.1.5.3 0.00000000000000000000000002323 117.0
BYD1_k127_6618753_4 pyrroloquinoline quinone binding - - - 0.00000000000000000000008093 104.0
BYD1_k127_6636356_0 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.0 1216.0
BYD1_k127_6636356_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit - - - 1.323e-201 639.0
BYD1_k127_6636356_2 xanthine dehydrogenase activity - - - 1.771e-197 639.0
BYD1_k127_6636356_3 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 404.0
BYD1_k127_6636356_4 CO dehydrogenase flavoprotein C-terminal domain K13479 - 1.17.1.4 0.000000000000000000000000000000000000000000000331 181.0
BYD1_k127_6636356_5 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000162 177.0
BYD1_k127_6636356_6 threonine synthase activity K01733,K15527 - 2.5.1.76,4.2.3.1 0.00000000000000000000008787 106.0
BYD1_k127_6661248_0 TonB-dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000031 205.0
BYD1_k127_6661248_1 Lactonase, 7-bladed beta-propeller K07004 - - 0.00000000000000000000000000000000000000003162 171.0
BYD1_k127_6661248_2 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000199 143.0
BYD1_k127_6661248_3 extracellular matrix structural constituent - - - 0.00002251 57.0
BYD1_k127_6665549_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000001899 243.0
BYD1_k127_6665549_1 Belongs to the TrpC family K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.000000000000000000000000000000000000000000000000001534 196.0
BYD1_k127_6666455_0 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000001616 258.0
BYD1_k127_6666455_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005939 253.0
BYD1_k127_6666455_2 extracellular matrix structural constituent - - - 0.00000000000000003749 82.0
BYD1_k127_6666625_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.881e-257 804.0
BYD1_k127_6666625_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 1.7e-255 804.0
BYD1_k127_6666625_10 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.00000002709 57.0
BYD1_k127_6666625_11 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000004154 56.0
BYD1_k127_6666625_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004457 585.0
BYD1_k127_6666625_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 409.0
BYD1_k127_6666625_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 336.0
BYD1_k127_6666625_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003443 284.0
BYD1_k127_6666625_6 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000001046 254.0
BYD1_k127_6666625_7 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 - - 0.0000000000000000000000000000000000000000000000001497 192.0
BYD1_k127_6666625_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000005109 89.0
BYD1_k127_6666625_9 Protein of unknown function (DUF721) - - - 0.00000001416 62.0
BYD1_k127_6675822_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 1.413e-264 859.0
BYD1_k127_6675822_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 457.0
BYD1_k127_6675822_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 374.0
BYD1_k127_6675822_3 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 295.0
BYD1_k127_6675822_4 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000007971 207.0
BYD1_k127_6675822_5 Aerotolerance regulator N-terminal - - - 0.00000000000000000000000000000000000000000000000000002197 212.0
BYD1_k127_6677660_0 PFAM NAD-dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 487.0
BYD1_k127_6677660_1 COGs COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000006413 220.0
BYD1_k127_6677660_2 Histidine kinase K07636,K07768 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009405,GO:0009987,GO:0016020,GO:0016310,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0051704,GO:0071704,GO:0071944,GO:1901564 2.7.13.3 0.000000000000000000000000002415 125.0
BYD1_k127_6677660_3 TonB dependent receptor K02014,K16087 - - 0.000000000000000000000001254 116.0
BYD1_k127_6677660_4 Polysaccharide biosynthesis/export protein - - - 0.0002365 53.0
BYD1_k127_6706596_0 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000004322 211.0
BYD1_k127_6706596_1 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.000000000000000004177 89.0
BYD1_k127_6706596_2 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.000000000000004009 80.0
BYD1_k127_6706596_3 Ethanolamine utilisation protein EutN/carboxysome - - - 0.0000000001396 70.0
BYD1_k127_6724474_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000537 187.0
BYD1_k127_6724474_1 Aldo/keto reductase family - - - 0.00000000000000000006187 91.0
BYD1_k127_6724474_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00005876 55.0
BYD1_k127_6735855_0 PFAM extracellular solute-binding protein family 1 K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 368.0
BYD1_k127_6735855_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 361.0
BYD1_k127_6735855_2 Signal transduction histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001932 284.0
BYD1_k127_6735855_3 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001404 264.0
BYD1_k127_6755638_0 Trypsin-like peptidase domain K01337 - 3.4.21.50 0.00000000000000000000000000000000005883 142.0
BYD1_k127_6755638_1 Periplasmic copper-binding protein (NosD) - - - 0.00008656 56.0
BYD1_k127_6758164_0 Surface antigen K07277 - - 0.00000000000000000000000000000000000000000000000000000001435 220.0
BYD1_k127_6788198_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000001992 228.0
BYD1_k127_6788198_1 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000001198 109.0
BYD1_k127_6788198_2 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000008855 67.0
BYD1_k127_6847782_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000001863 178.0
BYD1_k127_6847782_1 Tetratricopeptide repeat protein - - - 0.0000000000000000000009729 105.0
BYD1_k127_6847782_2 - - - - 0.00000000000004508 80.0
BYD1_k127_6862236_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 1.941e-225 726.0
BYD1_k127_6862236_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 338.0
BYD1_k127_6862236_2 PFAM PHP domain protein K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000001316 169.0
BYD1_k127_687014_0 LVIVD repeat K01179 - 3.2.1.4 0.000000000000002055 89.0
BYD1_k127_6910443_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 345.0
BYD1_k127_6910443_1 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000001016 215.0
BYD1_k127_6910443_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000000000000000000000000005689 129.0
BYD1_k127_6910443_3 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.00000000000000000000000000001707 119.0
BYD1_k127_6910443_4 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000000000001711 115.0
BYD1_k127_6921000_0 PFAM Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001376 241.0
BYD1_k127_6922803_0 protein kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 596.0
BYD1_k127_6922803_1 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.000000000000000000003568 98.0
BYD1_k127_6924062_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 597.0
BYD1_k127_6924062_1 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 589.0
BYD1_k127_6924062_2 ABC transporter substrate-binding protein K02027 - - 0.0000000000001544 84.0
BYD1_k127_6928622_0 ABC transporter, transmembrane K18889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 323.0
BYD1_k127_6928622_1 Bacterial sugar transferase - - - 0.00000000000000000000000000000000000000000000000000000005797 205.0
BYD1_k127_6942119_0 PFAM sigma-54 factor interaction domain-containing protein K02481,K07714,K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001382 264.0
BYD1_k127_6968549_0 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000001358 251.0
BYD1_k127_6968549_1 Squalene/phytoene synthase K00801 - 2.5.1.21 0.000000000000000000000000000000000002333 148.0
BYD1_k127_6983872_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 374.0
BYD1_k127_6983872_1 PFAM Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001219 261.0
BYD1_k127_6983872_2 Tetratricopeptide repeat - - - 0.0000000003042 71.0
BYD1_k127_69879_0 pfam abc K01990,K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 316.0
BYD1_k127_69879_1 Tetratricopeptide repeat - - - 0.000582 52.0
BYD1_k127_7034371_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000001236 265.0
BYD1_k127_7034371_1 Penicillin-binding Protein dimerisation domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000567 151.0
BYD1_k127_7034371_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000004891 125.0
BYD1_k127_7034371_3 Belongs to the MraZ family K03925 - - 0.0000000000000000603 87.0
BYD1_k127_7034371_4 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.000000000000002564 91.0
BYD1_k127_7034371_5 Amidohydrolase K07045 - - 0.00000000000005526 81.0
BYD1_k127_7034371_6 Polysaccharide biosynthesis protein - - - 0.000000000001757 80.0
BYD1_k127_7034371_7 periplasmic ligand-binding sensor domain - - - 0.00000000003063 73.0
BYD1_k127_7035654_0 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007096 497.0
BYD1_k127_7035654_1 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000004356 64.0
BYD1_k127_7035654_2 - - - - 0.000002566 51.0
BYD1_k127_7053833_0 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 312.0
BYD1_k127_7053833_1 arylsulfatase A - - - 0.0000000000000000003807 94.0
BYD1_k127_7064348_0 TonB-dependent receptor - - - 1.176e-265 844.0
BYD1_k127_7081847_0 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000489 275.0
BYD1_k127_7081847_1 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000008435 143.0
BYD1_k127_7081847_2 ADP-ribosylglycohydrolase - - - 0.00000000000000000000002242 115.0
BYD1_k127_7110544_0 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000000000000000001608 176.0
BYD1_k127_7115173_0 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005172 272.0
BYD1_k127_7115173_1 Peptidase family S49 K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009737 270.0
BYD1_k127_7115173_2 PFAM M42 glutamyl aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005483 252.0
BYD1_k127_7115173_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000001044 227.0
BYD1_k127_7115173_4 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000001918 211.0
BYD1_k127_7115173_5 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000003961 154.0
BYD1_k127_7150587_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000009479 238.0
BYD1_k127_7152348_0 Belongs to the peptidase S8 family K13276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 353.0
BYD1_k127_7152348_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000003942 55.0
BYD1_k127_7170712_0 ATP dependent DNA ligase C terminal region K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009516 608.0
BYD1_k127_7170712_1 Exonuclease of the beta-lactamase fold involved in RNA processing K07577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 415.0
BYD1_k127_7170712_2 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001083 263.0
BYD1_k127_7170712_3 Protein of unknown function, DUF488 - - - 0.000000000000000001483 88.0
BYD1_k127_7203246_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 1.201e-238 754.0
BYD1_k127_7203246_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000038 348.0
BYD1_k127_7203246_2 Belongs to the peptidase M24B family K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008098 280.0
BYD1_k127_7203246_3 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000002077 249.0
BYD1_k127_7203246_4 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0009975,GO:0016829,GO:0016849 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000001016 231.0
BYD1_k127_7203246_5 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000009479 215.0
BYD1_k127_7203246_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000306 209.0
BYD1_k127_7203246_7 Serine aminopeptidase, S33 K18368 GO:0000302,GO:0003674,GO:0003824,GO:0003846,GO:0004620,GO:0004622,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005794,GO:0005886,GO:0005911,GO:0006629,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008374,GO:0009506,GO:0009636,GO:0010035,GO:0010038,GO:0010043,GO:0012505,GO:0016020,GO:0016298,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0016787,GO:0016788,GO:0030054,GO:0042221,GO:0042493,GO:0042542,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0046686,GO:0050896,GO:0052689,GO:0055044,GO:0071704,GO:0071944,GO:0090430,GO:1901700 - 0.00001637 55.0
BYD1_k127_7203246_8 Psort location OuterMembrane, score - - - 0.0004165 53.0
BYD1_k127_7239436_0 Proton-conducting membrane transporter K00342 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0030964,GO:0031224,GO:0031226,GO:0032991,GO:0034220,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0048037,GO:0048038,GO:0048039,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0070469,GO:0070470,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0098803,GO:1902494,GO:1902600,GO:1990204 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 565.0
BYD1_k127_7239436_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004996 448.0
BYD1_k127_7239436_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000001499 193.0
BYD1_k127_7247128_0 Insulinase (Peptidase family M16) K07263 - - 4.098e-202 662.0
BYD1_k127_7247128_1 type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009529 275.0
BYD1_k127_7248329_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567,K04568 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004824,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006430,GO:0006518,GO:0006520,GO:0006629,GO:0006644,GO:0006650,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009405,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019637,GO:0019752,GO:0030312,GO:0030322,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0040007,GO:0042221,GO:0042391,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046471,GO:0046483,GO:0046486,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 503.0
BYD1_k127_7248329_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016149,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 383.0
BYD1_k127_7248329_2 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007779 289.0
BYD1_k127_7248329_3 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002188 251.0
BYD1_k127_7248329_4 UvrB/uvrC motif K19411 GO:0003674,GO:0005488,GO:0005507,GO:0006950,GO:0008150,GO:0008270,GO:0010035,GO:0010038,GO:0042221,GO:0043167,GO:0043169,GO:0046686,GO:0046688,GO:0046870,GO:0046872,GO:0046914,GO:0050896,GO:0050897,GO:0097501,GO:1990169,GO:1990170 - 0.0000000000000000000001531 111.0
BYD1_k127_7248329_5 Catalyzes the specific phosphorylation of arginine residues in proteins K19405 - 2.7.14.1 0.0000000000000000000001653 102.0
BYD1_k127_7265042_0 ImcF-related N-terminal domain K11891 - - 0.000000000000000000000000000000000000000000000000000000000005115 235.0
BYD1_k127_7265042_1 - - - - 0.0000001014 60.0
BYD1_k127_7265042_2 deoxyhypusine monooxygenase activity - - - 0.0002451 52.0
BYD1_k127_7284206_0 PFAM Permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 1.791e-200 634.0
BYD1_k127_7284206_1 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001431 273.0
BYD1_k127_7284206_2 Belongs to the D-alanine--D-alanine ligase family - - - 0.00000000000001908 79.0
BYD1_k127_7284206_3 secretion protein K01993 - - 0.000002188 56.0
BYD1_k127_7294781_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000007228 73.0
BYD1_k127_733319_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007883 281.0
BYD1_k127_733319_1 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000007365 186.0
BYD1_k127_7335799_0 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001532 256.0
BYD1_k127_7335799_1 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006572 250.0
BYD1_k127_7335799_2 FtsZ-dependent cytokinesis - - - 0.00000000000000000000000000000000000000000000000001235 200.0
BYD1_k127_7335799_3 - - - - 0.0000000000000000000005461 108.0
BYD1_k127_7335799_4 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0001243 51.0
BYD1_k127_7353441_0 Outer membrane protein beta-barrel family K16087,K16092 - - 0.0000000000000000000000000008077 126.0
BYD1_k127_7360578_0 Oxygen tolerance - - - 0.000000000000000000000000000000000000000000000000000000000000007253 236.0
BYD1_k127_7360578_1 Tetratricopeptide repeat - - - 0.0000000747 64.0
BYD1_k127_7360578_2 von Willebrand factor (vWF) type A domain K07114 - - 0.000002321 50.0
BYD1_k127_7373175_0 Superoxide dismutase K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002349 261.0
BYD1_k127_7373175_1 Haloacid dehalogenase-like hydrolase K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000007869 186.0
BYD1_k127_7373175_2 Dimerisation domain K00543 - 2.1.1.4 0.0000000000000000000000000001879 131.0
BYD1_k127_737366_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 471.0
BYD1_k127_737366_1 FG-GAP repeat - - - 0.00000000000000007851 91.0
BYD1_k127_737366_2 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000001156 87.0
BYD1_k127_7378442_0 Cytochrome bd-type quinol oxidase subunit 1 K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006666 534.0
BYD1_k127_7378442_1 oxidase, subunit K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 369.0
BYD1_k127_7378442_2 L,D-transpeptidase catalytic domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007265 365.0
BYD1_k127_7378442_3 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000000000000003626 232.0
BYD1_k127_7378442_4 PFAM 6-O-methylguanine DNA methyltransferase, DNA binding domain K07443 - - 0.000000000000000000000001984 107.0
BYD1_k127_7378442_6 NADH dehydrogenase (ubiquinone) activity K14089 - - 0.00000007531 53.0
BYD1_k127_7378442_7 von Willebrand factor, type A - - - 0.0003027 52.0
BYD1_k127_739468_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005851 488.0
BYD1_k127_739468_1 Peptidase family M23 K21471 GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.00000000000000000000000000000000000000000000000003163 203.0
BYD1_k127_739468_2 Part of the ABC transporter FtsEX involved in K09811 - - 0.000000000000000000000000000000000001893 151.0
BYD1_k127_740360_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 309.0
BYD1_k127_740360_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000002325 273.0
BYD1_k127_740360_2 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000001423 168.0
BYD1_k127_740360_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000001112 153.0
BYD1_k127_740360_4 Preprotein translocase, YajC K03210 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031522,GO:0032991,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000742 106.0
BYD1_k127_7405972_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 402.0
BYD1_k127_7405972_2 long-chain fatty acid transporting porin activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004163 274.0
BYD1_k127_7405972_3 Lamin Tail Domain - - - 0.00000000000000000000001755 107.0
BYD1_k127_7405972_4 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000007273 96.0
BYD1_k127_7420945_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016020,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0040007,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000008431 211.0
BYD1_k127_7420945_1 chemotaxis protein K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000607 212.0
BYD1_k127_7420945_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.00000000000000000000000002201 112.0
BYD1_k127_7427386_0 Predicted permease K07089,K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008356 430.0
BYD1_k127_7427386_1 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000624 272.0
BYD1_k127_7427386_2 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000001765 274.0
BYD1_k127_7427386_3 SPFH Band 7 PHB domain protein K04087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003574 275.0
BYD1_k127_7427386_4 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000005594 226.0
BYD1_k127_7427386_5 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000001693 218.0
BYD1_k127_7427386_6 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000007897 145.0
BYD1_k127_7427386_7 transferase activity, transferring glycosyl groups - - - 0.00000000000000003509 94.0
BYD1_k127_7435994_0 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002894 276.0
BYD1_k127_7435994_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000003252 208.0
BYD1_k127_7435994_2 cellulase activity K01183 - 3.2.1.14 0.0000000134 68.0
BYD1_k127_744641_0 oligosaccharyl transferase activity - - - 0.00000000000000000000000000000000000003833 162.0
BYD1_k127_744641_1 tetraacyldisaccharide 4'-kinase activity K00912,K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 2.7.1.130 0.00000000000000000001024 93.0
BYD1_k127_744641_2 Evidence 5 No homology to any previously reported sequences - - - 0.000003036 50.0
BYD1_k127_744641_3 - - - - 0.0002385 49.0
BYD1_k127_7456555_0 PFAM Glycoside hydrolase 15-related - - - 1.102e-235 774.0
BYD1_k127_7456555_1 ABC-type sugar transport system, permease component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 333.0
BYD1_k127_7456555_2 transmembrane transport K02025,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 290.0
BYD1_k127_7490595_0 Anthranilate synthase component I, N terminal region K01657,K01665,K13950 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007582 277.0
BYD1_k127_7490595_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000002915 182.0
BYD1_k127_7490595_2 lipolytic protein G-D-S-L family - - - 0.00000006828 65.0
BYD1_k127_7494355_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 5.015e-212 671.0
BYD1_k127_7519275_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 344.0
BYD1_k127_7519275_1 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 318.0
BYD1_k127_7519275_2 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000003015 206.0
BYD1_k127_7519275_3 Peptidase family C25 - - - 0.000000000000005323 90.0
BYD1_k127_7519275_4 - - - - 0.0000004574 60.0
BYD1_k127_7519275_6 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00002709 58.0
BYD1_k127_7576725_0 impB/mucB/samB family K02346,K03502 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000003239 279.0
BYD1_k127_7576725_1 - - - - 0.0000000000000001049 82.0
BYD1_k127_7576725_2 DinB family - - - 0.0000000000000003796 79.0
BYD1_k127_7580096_0 Belongs to the Nudix hydrolase family - - - 0.000000000000000000000003784 109.0
BYD1_k127_7580096_1 cellulase activity K01201 - 3.2.1.45 0.000000000000000000009208 106.0
BYD1_k127_7580096_2 Putative zinc- or iron-chelating domain K06940 - - 0.00001702 55.0
BYD1_k127_7580096_3 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0001569 48.0
BYD1_k127_7580096_4 exo-alpha-(2->6)-sialidase activity - - - 0.0002731 53.0
BYD1_k127_7589021_0 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000002999 130.0
BYD1_k127_7592565_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1032.0
BYD1_k127_7592565_1 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008837 463.0
BYD1_k127_7592565_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006721 394.0
BYD1_k127_7592565_3 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 329.0
BYD1_k127_7592565_4 - - - - 0.000000000000000000000000000000000000000000000009682 184.0
BYD1_k127_7592565_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000002159 101.0
BYD1_k127_7639452_0 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000001336 272.0
BYD1_k127_7639452_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.00000000000000000000000000000000000000000000000000000000000000006023 230.0
BYD1_k127_7639452_2 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000001003 207.0
BYD1_k127_7639452_3 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000004881 118.0
BYD1_k127_7639452_4 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.000000000002035 75.0
BYD1_k127_7685738_0 ABC transporter transmembrane K11085 - - 4.493e-258 809.0
BYD1_k127_7685738_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004439 268.0
BYD1_k127_7685738_2 Branched-chain amino acid transport system / permease component K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001932 263.0
BYD1_k127_7685738_3 Metallo-beta-lactamase superfamily K02238 - - 0.000000000000000000000002815 117.0
BYD1_k127_7685738_4 ABC transporter K02056 - 3.6.3.17 0.00000000000000000003606 92.0
BYD1_k127_7692134_0 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08256 - 2.4.1.345,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000005707 271.0
BYD1_k127_7692134_1 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000001287 237.0
BYD1_k127_7692134_2 Bacterial lipid A biosynthesis acyltransferase K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.000000000000000000000000006069 122.0
BYD1_k127_7692134_3 Dehydrogenase K00074 - 1.1.1.157 0.00000003801 58.0
BYD1_k127_7740129_0 glycosyl hydrolase, BNR repeat-containing protein - - - 0.0000000000000000000000000127 126.0
BYD1_k127_7749118_0 lyase activity - - - 0.00000000000000000000000000000000000000000000000002431 203.0
BYD1_k127_7749118_1 Thioredoxin-like - - - 0.000000000000000000006537 100.0
BYD1_k127_7749118_2 Protein of unknown function (DUF3570) - - - 0.0000000000000000002819 102.0
BYD1_k127_7749118_3 amine dehydrogenase activity - - - 0.000000006224 69.0
BYD1_k127_7764552_0 Glycosyl transferases group 1 K00754 GO:0003674,GO:0003824,GO:0016740,GO:0016757 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 366.0
BYD1_k127_7764552_1 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000002381 223.0
BYD1_k127_7764552_2 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000004899 228.0
BYD1_k127_7764552_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000003807 176.0
BYD1_k127_7764552_4 PFAM GlcNAc-PI de-N-acetylase K01463 - - 0.00001145 50.0
BYD1_k127_7772323_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 538.0
BYD1_k127_7772323_1 SMART LamG domain protein jellyroll fold domain protein - - - 0.0000000000000000000000000000000000000000000000000855 191.0
BYD1_k127_7772323_2 FlgD Ig-like domain - - - 0.00000001668 66.0
BYD1_k127_7811834_0 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 368.0
BYD1_k127_7811834_1 protein conserved in bacteria K09859 - - 0.000000000000000000000000000000000000000000000000000000000000000923 237.0
BYD1_k127_7811834_2 Belongs to the peptidase S8 family K08651,K14743 - 3.4.21.66 0.000000000000000000000000000000000000000000000000000001019 209.0
BYD1_k127_7811834_3 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000000000000008835 138.0
BYD1_k127_7811834_4 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000008496 91.0
BYD1_k127_7830070_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 2.242e-199 639.0
BYD1_k127_7830070_1 Protein of Unknown function (DUF2784) - - - 0.000000000005658 66.0
BYD1_k127_7853764_0 Domains GAF, HisKA, HATPase_c, GAF, HD-GYP-related - - - 0.000000000009898 79.0
BYD1_k127_7853764_1 Belongs to the PEP-utilizing enzyme family K08484 - 2.7.3.9 0.000009606 59.0
BYD1_k127_7853764_2 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00001482 52.0
BYD1_k127_7911844_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 1.204e-210 674.0
BYD1_k127_7911844_1 phosphoglycerate mutase K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 374.0
BYD1_k127_7911844_2 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005335 284.0
BYD1_k127_7911844_3 Cobalt transport protein K16785 - - 0.0000000000000000000000000000000000000000000001131 177.0
BYD1_k127_7911844_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0030312,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:1901360 5.4.99.12 0.000000000000000000000000000000000000000000005422 182.0
BYD1_k127_7925645_0 Tetratricopeptide repeat protein - - - 0.000000000005979 73.0
BYD1_k127_7925645_1 Cytochrome D1 heme domain - - - 0.0002502 51.0
BYD1_k127_7969534_0 PFAM ABC transporter related K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000001335 254.0
BYD1_k127_7969534_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000002465 206.0
BYD1_k127_7969534_2 ABC-type transport system, periplasmic component surface lipoprotein K07335 - - 0.000000000000000000003607 95.0
BYD1_k127_798921_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 605.0
BYD1_k127_798921_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 479.0
BYD1_k127_798921_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.000000000000000000000003048 113.0
BYD1_k127_7990410_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 348.0
BYD1_k127_7990410_1 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 317.0
BYD1_k127_7990410_2 Ring hydroxylating alpha subunit (catalytic domain) K00479,K00499 - 1.14.15.7 0.0000000000000000000000000000000000000000000000000002428 191.0
BYD1_k127_7996063_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.732e-251 789.0
BYD1_k127_7996063_1 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000001696 255.0
BYD1_k127_7996063_2 Lysylphosphatidylglycerol synthase TM region - - - 0.000004417 56.0
BYD1_k127_8097325_0 proline dehydrogenase activity K00318 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006256 254.0
BYD1_k127_8097325_1 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000621 149.0
BYD1_k127_8097325_2 ASPIC and UnbV - - - 0.00000000000000000000000000000000001423 156.0
BYD1_k127_8097325_3 protein secretion - - - 0.000000000001091 81.0
BYD1_k127_8107049_0 slime layer polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 414.0
BYD1_k127_8107049_1 AMP-binding enzyme K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000001594 246.0
BYD1_k127_8107049_2 Male sterility protein K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000002222 211.0
BYD1_k127_8107049_3 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000005465 119.0
BYD1_k127_8177098_0 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 309.0
BYD1_k127_8177098_1 Pregnancy-associated plasma protein-A - - - 0.0000000000000000000000001909 114.0
BYD1_k127_8177098_2 - - - - 0.0000001804 64.0
BYD1_k127_8177098_4 FlgD Ig-like domain - - - 0.0000102 55.0
BYD1_k127_8185155_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1118.0
BYD1_k127_8185155_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 3.071e-247 786.0
BYD1_k127_8185155_2 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000002269 201.0
BYD1_k127_8185155_3 Caspase domain - - - 0.00000000000000000000000002148 124.0
BYD1_k127_8198534_0 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000002204 169.0
BYD1_k127_8198534_1 Insulinase (Peptidase family M16) K07263 - - 0.0000000000000000000000003579 111.0
BYD1_k127_819924_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.00000000000000000000000000000000000000000000007266 178.0
BYD1_k127_819924_1 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.000000000000000000000005228 112.0
BYD1_k127_819924_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 GO:0003674,GO:0003824,GO:0004750,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009056,GO:0009117,GO:0009987,GO:0016052,GO:0016853,GO:0016854,GO:0016857,GO:0019321,GO:0019323,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046483,GO:0046496,GO:0046872,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564,GO:1901575 5.1.3.1 0.0000000000000000003577 91.0
BYD1_k127_8211789_0 peptidyl-tyrosine sulfation - - - 3.579e-239 759.0
BYD1_k127_8211789_1 PFAM multicopper oxidase type 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000007262 225.0
BYD1_k127_8265676_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004773 385.0
BYD1_k127_8265676_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 359.0
BYD1_k127_8265676_2 COG0747 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 331.0
BYD1_k127_8265676_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009006 322.0
BYD1_k127_8265676_4 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035,K13893 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008328 301.0
BYD1_k127_8265676_5 Uncharacterized ACR, COG1993 K09137 - - 0.000000000000000000000000000000000000000001451 159.0
BYD1_k127_8265676_6 - - - - 0.00000000000000000000000000000000003086 137.0
BYD1_k127_8265676_7 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000005805 94.0
BYD1_k127_8291504_0 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000009013 281.0
BYD1_k127_8291504_1 - - - - 0.000000000007213 78.0
BYD1_k127_8322686_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000006446 209.0
BYD1_k127_8322686_1 Belongs to the peptidase S8 family - - - 0.00000000000000006602 89.0
BYD1_k127_8326723_0 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002368 268.0
BYD1_k127_8326723_1 protein conserved in bacteria K11891 - - 0.0000000000000000000000000000000000000000000000000000000000000000001853 248.0
BYD1_k127_8326723_2 Type VI secretion system protein DotU K11892 - - 0.0000000000000000000000000000001045 133.0
BYD1_k127_8326723_3 Lytic transglycosylase catalytic K08307 - - 0.0000000000000000000000000001149 134.0
BYD1_k127_8326723_4 Protein phosphatase 2C K20074 - 3.1.3.16 0.00000000000000000002966 94.0
BYD1_k127_8326723_5 Type VI secretion K11906 - - 0.00000000000002141 79.0
BYD1_k127_8326723_6 histone H2A K63-linked ubiquitination K16922 - - 0.000000000001593 74.0
BYD1_k127_8326723_7 PFAM Forkhead-associated protein - - - 0.00000001936 67.0
BYD1_k127_834471_0 protein kinase activity - - - 0.00005974 55.0
BYD1_k127_8352623_0 oxoglutarate dehydrogenase (succinyl-transferring) activity K00164,K01616 GO:0000287,GO:0003674,GO:0003824,GO:0004591,GO:0005488,GO:0005515,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006103,GO:0008150,GO:0008152,GO:0008683,GO:0009055,GO:0009060,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016624,GO:0016740,GO:0016744,GO:0016829,GO:0016830,GO:0016831,GO:0016903,GO:0016999,GO:0017144,GO:0019752,GO:0019842,GO:0022900,GO:0030312,GO:0030976,GO:0032991,GO:0036094,GO:0040007,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0045333,GO:0046872,GO:0048037,GO:0050439,GO:0050662,GO:0051186,GO:0055114,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204,GO:1990234 1.2.4.2,4.1.1.71 0.0 1175.0
BYD1_k127_8352623_1 Tricorn protease C1 domain K08676 - - 7.382e-209 689.0
BYD1_k127_8352623_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009797 290.0
BYD1_k127_8352623_3 Chalcone and stilbene synthases, C-terminal domain K16167 - - 0.00000000000000000000000000000000000000000000000000000000000000008107 237.0
BYD1_k127_8352623_4 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000001794 168.0
BYD1_k127_8352623_5 protein required for cytochrome oxidase assembly K02259 - - 0.00000000000000000000000000000002873 141.0
BYD1_k127_8352623_6 FAD binding domain - - - 0.0000000000002614 74.0
BYD1_k127_8362266_0 Pyridoxal-phosphate dependent enzyme K01697,K01738 - 2.5.1.47,4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 476.0
BYD1_k127_8362266_1 cystathionine gamma-synthase activity K01739,K01758,K01760,K01761 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0003962,GO:0004121,GO:0004123,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0016829,GO:0016846,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.48,4.4.1.1,4.4.1.11,4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 455.0
BYD1_k127_8362266_2 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 355.0
BYD1_k127_8362266_3 dUTPase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004577 309.0
BYD1_k127_8362266_4 D-isomer specific 2-hydroxyacid dehydrogenase catalytic region K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006166 281.0
BYD1_k127_8362266_5 electron transfer flavoprotein, alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001187 268.0
BYD1_k127_8362266_6 PFAM Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000001903 206.0
BYD1_k127_8362266_7 BNR repeat-like domain K05989 - 3.2.1.40 0.00000000000000004155 92.0
BYD1_k127_8387081_0 Amidohydrolase family K01464 - 3.5.2.2 6.676e-197 627.0
BYD1_k127_8387081_1 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 580.0
BYD1_k127_8387081_2 Tetratricopeptide repeat - - - 0.00002943 54.0
BYD1_k127_8388295_0 NHL repeat containing protein - - - 0.0000000000000000000000000000000000000007415 154.0
BYD1_k127_8388295_1 Sigma-70, region 4 K03088 - - 0.000000000000000005012 92.0
BYD1_k127_8388295_2 parallel beta-helix repeat - - - 0.0009708 51.0
BYD1_k127_8396369_0 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003506 282.0
BYD1_k127_8396369_1 Outer membrane efflux protein K12340 - - 0.00000000004446 75.0
BYD1_k127_8418732_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 2.108e-232 730.0
BYD1_k127_8418732_1 Domains REC, sigma54 interaction, HTH8 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 367.0
BYD1_k127_8418732_2 COG1874 Beta-galactosidase - - - 0.00000000000000000000000000000000000000000000000000000000000002454 228.0
BYD1_k127_8418732_3 proteolysis K07059 - - 0.000000000000000000000000000000000000000003459 160.0
BYD1_k127_8418732_4 Histidine kinase HAMP - - - 0.0000000000000000000000000000000000000001304 166.0
BYD1_k127_8418732_5 molybdopterin binding domain K03750 - 2.10.1.1 0.00000000000000000000000000000000003083 139.0
BYD1_k127_8418732_6 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010033,GO:0016032,GO:0016465,GO:0019058,GO:0019068,GO:0032991,GO:0035966,GO:0042221,GO:0042802,GO:0043167,GO:0043169,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051704,GO:0061077,GO:0101031,GO:1990220 - 0.0000000000000000000000000000000004247 134.0
BYD1_k127_8418732_7 COG COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000001817 64.0
BYD1_k127_8418732_8 - - - - 0.0000008074 57.0
BYD1_k127_8426222_0 PFAM sugar transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000284 291.0
BYD1_k127_8426222_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000002038 59.0
BYD1_k127_8434782_0 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000008108 173.0
BYD1_k127_8434782_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000001556 159.0
BYD1_k127_8434782_2 O-linked GlcNAc transferase-putative TPR-containing transmembrane protein - - - 0.000000000000000000000000000424 133.0
BYD1_k127_8434782_3 transferase activity, transferring glycosyl groups - - - 0.00000000000002173 85.0
BYD1_k127_8469256_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 1.329e-256 814.0
BYD1_k127_8469256_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000009976 171.0
BYD1_k127_8469256_2 Belongs to the UPF0235 family K09131 - - 0.000000000001169 72.0
BYD1_k127_84937_0 arylsulfatase A - - - 0.000000000000000000000000000000000000000000000000000000000000002981 230.0
BYD1_k127_8513357_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 405.0
BYD1_k127_8513357_1 cellulose binding - - - 0.000000000000000000000000000000000000000007928 172.0
BYD1_k127_8513357_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000001804 164.0
BYD1_k127_8513357_3 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.000000000000358 82.0
BYD1_k127_8513357_4 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000006563 70.0
BYD1_k127_8515487_0 ASPIC and UnbV - - - 0.0000000000000000000000000000000000000000000004545 190.0
BYD1_k127_8515487_1 COG3119 Arylsulfatase A - - - 0.0005125 48.0
BYD1_k127_8526803_0 PFAM AMP-dependent synthetase and ligase - - - 2.913e-251 833.0
BYD1_k127_8526803_1 COGs COG0318 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 518.0
BYD1_k127_8526803_2 Polysaccharide biosynthesis protein K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 481.0
BYD1_k127_8526803_3 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000002138 178.0
BYD1_k127_854026_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000002258 263.0
BYD1_k127_854026_1 protein histidine kinase activity - - - 0.0000000000000000000000004742 106.0
BYD1_k127_854026_2 Domain of unknown function (DUF5060) - - - 0.000001683 61.0
BYD1_k127_8550617_0 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001824 254.0
BYD1_k127_8550617_1 Histidine kinase K07636 - 2.7.13.3 0.00001066 55.0
BYD1_k127_8567867_0 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 347.0
BYD1_k127_8567867_1 Domain of unknown function (DUF4010) - - - 0.000000000000000000007153 94.0
BYD1_k127_8593746_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 530.0
BYD1_k127_8593746_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 396.0
BYD1_k127_8593746_2 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.0000000000000000000000000000000000000000000000000000000000005014 219.0
BYD1_k127_8593746_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000001857 201.0
BYD1_k127_8593746_4 - - - - 0.0000000000000000000003101 98.0
BYD1_k127_8593746_5 FOG TPR repeat - - - 0.0000007591 59.0
BYD1_k127_8631867_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 4.107e-216 677.0
BYD1_k127_8631867_1 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000001599 100.0
BYD1_k127_8631867_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000001796 87.0
BYD1_k127_8631867_3 Flp Fap pilin component K02651 - - 0.0004308 46.0
BYD1_k127_863327_0 Multidrug ABC transporter ATP-binding protein K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 313.0
BYD1_k127_863327_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001141 261.0
BYD1_k127_863327_2 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000005295 57.0
BYD1_k127_8635075_0 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 370.0
BYD1_k127_8635075_1 CobQ CobB MinD ParA nucleotide binding domain K16554 - - 0.00000000000000000000000000000001035 137.0
BYD1_k127_8635075_2 lysyltransferase activity K07027 - - 0.00000000000000000000000000000002803 144.0
BYD1_k127_8635075_3 integral membrane protein K07027 - - 0.00000000000000000000000002516 123.0
BYD1_k127_8635075_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000001077 94.0
BYD1_k127_8635075_5 biosynthesis protein - - - 0.0005153 50.0
BYD1_k127_8640205_0 DNA polymerase X K02347 - - 2.785e-227 714.0
BYD1_k127_8640205_1 translation initiation factor activity - - - 0.00000000000002155 74.0
BYD1_k127_8659070_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 4.64e-265 832.0
BYD1_k127_8659070_1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00261,K00262 - 1.4.1.3,1.4.1.4 9.503e-206 648.0
BYD1_k127_8659070_2 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.0000000000000000000000000000000000000000000000000000000002712 213.0
BYD1_k127_8669917_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003916 384.0
BYD1_k127_8669917_1 - - - - 0.0000000000000000000000002369 114.0
BYD1_k127_8669917_2 protein heterodimerization activity - - - 0.000000000000000004059 85.0
BYD1_k127_8673520_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008203 539.0
BYD1_k127_8673520_1 Bifunctional phosphoglucose phosphomannose isomerase K15916 - 5.3.1.8,5.3.1.9 0.00000000000000000000000000000000000000000000000000000485 204.0
BYD1_k127_8673520_2 PTS HPr component phosphorylation site K11189 - - 0.00000000000000009559 82.0
BYD1_k127_8762323_0 ASPIC and UnbV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 572.0
BYD1_k127_8762323_1 drug transmembrane transporter activity K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000001286 245.0
BYD1_k127_8762323_2 response regulator receiver K02667 - - 0.000000000000000000000000000000000000000000000000000000000000005919 229.0
BYD1_k127_8762323_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000007849 221.0
BYD1_k127_8762323_4 KWG Leptospira - - - 0.00000000000000000000000000000000000000000000000000000000000748 235.0
BYD1_k127_8762323_5 Involved in initiation control of chromosome replication K07484 - - 0.000000005747 65.0
BYD1_k127_8762323_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00001927 58.0
BYD1_k127_8813037_0 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 313.0
BYD1_k127_8813037_1 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001263 279.0
BYD1_k127_8813037_2 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000009189 80.0
BYD1_k127_8813037_3 PFAM ABC transporter related K02013 - 3.6.3.34 0.0005555 44.0
BYD1_k127_8813399_0 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006441 438.0
BYD1_k127_8813399_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000001597 149.0
BYD1_k127_8822177_0 MutS domain I K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 6.378e-213 692.0
BYD1_k127_8822177_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008395 377.0
BYD1_k127_8822177_10 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000001097 153.0
BYD1_k127_8822177_11 lipopolysaccharide metabolic process K07502,K08309,K19804,K21572 - - 0.0000000000000000000000001367 121.0
BYD1_k127_8822177_12 MerR family transcriptional regulator - - - 0.00000000000000000008195 99.0
BYD1_k127_8822177_15 - - - - 0.0001951 44.0
BYD1_k127_8822177_2 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 GO:0001510,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016782,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035596,GO:0035597,GO:0035600,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050497,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:0090304,GO:1901360 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 360.0
BYD1_k127_8822177_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 345.0
BYD1_k127_8822177_4 tRNA methylthiotransferase YqeV K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 325.0
BYD1_k127_8822177_5 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 299.0
BYD1_k127_8822177_6 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004264 281.0
BYD1_k127_8822177_7 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000001086 243.0
BYD1_k127_8822177_8 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000002838 240.0
BYD1_k127_8822177_9 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000916 236.0
BYD1_k127_8836883_0 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000000000000000002242 132.0
BYD1_k127_8836883_1 Polysaccharide biosynthesis C-terminal domain - - - 0.00000000000000000000000003768 127.0
BYD1_k127_8836883_2 - - - - 0.000000007194 65.0
BYD1_k127_8836883_3 Chain length determinant protein - - - 0.0000001164 63.0
BYD1_k127_8836883_4 COG3307 Lipid A core - O-antigen ligase and related enzymes - - - 0.00000179 60.0
BYD1_k127_8860504_0 lipid kinase, YegS Rv2252 BmrU family - - - 0.00000000000000000000000000000000003269 152.0
BYD1_k127_8860504_1 Psort location Cytoplasmic, score 8.96 K00639 - 2.3.1.29 0.000000000000000000512 90.0
BYD1_k127_8860504_2 SNARE associated Golgi protein - - - 0.0000107 55.0
BYD1_k127_8860504_3 acetoacetate decarboxylase - - - 0.0003556 52.0
BYD1_k127_8872128_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000008539 208.0
BYD1_k127_8872128_1 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000005348 186.0
BYD1_k127_8872128_2 D,D-heptose 1,7-bisphosphate phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000002347 158.0
BYD1_k127_8872128_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000187 101.0
BYD1_k127_8890478_0 BlaR1 peptidase M56 - - - 0.000000000000000000000000000000000000000000000000009474 203.0
BYD1_k127_8890478_1 Methyltransferase domain - - - 0.0000000002456 66.0
BYD1_k127_8890478_2 Penicillinase repressor - - - 0.00000005565 55.0
BYD1_k127_8894906_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 496.0
BYD1_k127_8894906_1 - - - - 0.0000000000000000000000268 105.0
BYD1_k127_8894906_2 Carboxypeptidase regulatory-like domain - - - 0.00004708 49.0
BYD1_k127_8908529_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962,K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 392.0
BYD1_k127_8908529_1 Exopolysaccharide biosynthesis protein YbjH - - - 0.000000000000000000000000000000000000000000000297 177.0
BYD1_k127_8910133_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003581 295.0
BYD1_k127_8910133_1 Protein phosphatase 2C K20074 - 3.1.3.16 0.0000000000000000000000000000002461 128.0
BYD1_k127_8935570_0 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000009239 230.0
BYD1_k127_8935570_1 nucleotide catabolic process K05996 - 3.4.17.18 0.00000000000000002625 91.0
BYD1_k127_893629_0 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 357.0
BYD1_k127_893629_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 340.0
BYD1_k127_893629_2 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000001129 213.0
BYD1_k127_893629_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000136 59.0
BYD1_k127_8951559_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 485.0
BYD1_k127_8951559_1 Protein of unknown function (DUF2723) K16928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 385.0
BYD1_k127_8951559_2 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K15856 - 1.1.1.281 0.0000000000000000000000000000000000000000000000000000000000000000000000000001453 267.0
BYD1_k127_8951559_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000001231 218.0
BYD1_k127_8951559_4 Polysaccharide biosynthesis protein K01784,K08679 - 5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000001008 185.0
BYD1_k127_8971945_0 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 308.0
BYD1_k127_8971945_1 Glyoxalase-like domain K07104 - 1.13.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002214 249.0
BYD1_k127_8971945_2 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000001706 101.0
BYD1_k127_8971945_3 - - - - 0.000000000000000002981 92.0
BYD1_k127_9000112_0 amine dehydrogenase activity - - - 0.000000000000000017 84.0
BYD1_k127_9000112_1 - - - - 0.0000000000000001537 91.0
BYD1_k127_9000112_2 Cytochrome c - - - 0.00000000002473 72.0
BYD1_k127_900539_0 PFAM Peptidase M16 inactive domain K07263 - - 0.000000000000000000000000000000000000000000000009546 188.0
BYD1_k127_900539_1 Sulfotransferase family - - - 0.00000000000000000000000000000000000005049 154.0
BYD1_k127_900539_2 PFAM Phospholipase Carboxylesterase K06999 - - 0.0001715 53.0
BYD1_k127_9072868_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 601.0
BYD1_k127_9072868_1 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000001926 207.0
BYD1_k127_9097624_0 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 352.0
BYD1_k127_9097624_1 von Willebrand factor (vWF) type A domain K07114,K12511 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 301.0
BYD1_k127_9097624_2 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000002488 196.0
BYD1_k127_9097624_3 subunit of a heme lyase K02198,K02200,K04016,K04017,K04018 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015035,GO:0015036,GO:0016020,GO:0016043,GO:0016491,GO:0016667,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0018193,GO:0018198,GO:0018378,GO:0019538,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098567,GO:1901564 - 0.000000000000000001119 97.0
BYD1_k127_9101233_0 Protein of unknown function (DUF3604) - - - 0.000000000000000000000000000000001276 147.0
BYD1_k127_9102973_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005326 479.0
BYD1_k127_9102973_1 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 375.0
BYD1_k127_9102973_2 Belongs to the purine pyrimidine phosphoribosyltransferase family. PyrR subfamily K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000002928 244.0
BYD1_k127_9102973_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001178 143.0
BYD1_k127_9102973_4 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.0000136 50.0
BYD1_k127_9102973_5 extracellular matrix structural constituent - - - 0.0002472 53.0
BYD1_k127_9114960_0 helicase K10843 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 624.0
BYD1_k127_9114960_1 ABC transporter substrate-binding protein PnrA-like K07335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009947 292.0
BYD1_k127_9114960_2 ATPases associated with a variety of cellular activities K02056 - 3.6.3.17 0.000000000000009833 81.0
BYD1_k127_9114960_3 regulation of single-species biofilm formation - - - 0.0000000004816 73.0
BYD1_k127_9115067_0 nodulation K00612 - - 2.799e-258 809.0
BYD1_k127_9115067_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000001343 87.0
BYD1_k127_9115067_2 - - - - 0.00000000001915 74.0
BYD1_k127_9121703_0 von Willebrand factor type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008518 319.0
BYD1_k127_9121703_1 Glycosyl transferases group 1 K21001 - - 0.000000000000000000000000000000000000002364 160.0
BYD1_k127_9121703_2 COG4206 Outer membrane cobalamin receptor protein K16092 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0006810,GO:0006811,GO:0008150,GO:0015075,GO:0015267,GO:0015318,GO:0015889,GO:0015893,GO:0016020,GO:0016021,GO:0019904,GO:0022803,GO:0022838,GO:0022857,GO:0031224,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0055085,GO:0071702,GO:0071705 - 0.00000000002356 77.0
BYD1_k127_9121703_3 Belongs to the glycosyl hydrolase 30 family K15924 - 3.2.1.136 0.000000003008 70.0
BYD1_k127_9124695_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004834 372.0
BYD1_k127_9124695_1 DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000001985 214.0
BYD1_k127_9124695_2 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000005538 143.0
BYD1_k127_9124695_3 haloacid dehalogenase K01091 - 3.1.3.18 0.0000000000000005145 88.0
BYD1_k127_9124695_4 pfkB family carbohydrate kinase K00847,K00852,K18478 - 2.7.1.15,2.7.1.184,2.7.1.4 0.0000000000000006833 89.0
BYD1_k127_9145350_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 7.5e-296 932.0
BYD1_k127_9145350_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 1.496e-220 704.0
BYD1_k127_9145350_10 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 297.0
BYD1_k127_9145350_11 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000000003489 187.0
BYD1_k127_9145350_12 PRC-barrel domain - - - 0.000000000000000000000000000000000000513 154.0
BYD1_k127_9145350_13 Secretion protein K01993 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000006592 132.0
BYD1_k127_9145350_14 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.000000000000000000000000000000002881 130.0
BYD1_k127_9145350_15 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000009513 131.0
BYD1_k127_9145350_16 - - - - 0.00000000000000007069 87.0
BYD1_k127_9145350_18 Evidence 5 No homology to any previously reported sequences - - - 0.000000007477 69.0
BYD1_k127_9145350_19 - - - - 0.0000004558 62.0
BYD1_k127_9145350_2 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 483.0
BYD1_k127_9145350_20 Right handed beta helix region - - - 0.000007402 59.0
BYD1_k127_9145350_3 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 443.0
BYD1_k127_9145350_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 444.0
BYD1_k127_9145350_5 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 404.0
BYD1_k127_9145350_6 Major facilitator Superfamily K08162,K08226,K16211 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 320.0
BYD1_k127_9145350_7 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 317.0
BYD1_k127_9145350_8 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004162 311.0
BYD1_k127_9145350_9 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 301.0
BYD1_k127_9154414_0 GTPase activity K07588 - - 0.000000000000000000000000000004446 122.0
BYD1_k127_9154414_1 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530,K05788 - - 0.000000000000000000000001299 108.0
BYD1_k127_9154414_2 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000004685 99.0
BYD1_k127_9154414_3 Phytol kinase K15892,K18678 - 2.7.1.182,2.7.1.216 0.0000000000000002436 86.0
BYD1_k127_9154414_4 Helix-turn-helix domain - - - 0.000000002413 61.0
BYD1_k127_9154922_0 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000000000000000000000001114 217.0
BYD1_k127_9154922_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000007579 149.0
BYD1_k127_9154922_2 BON domain - - - 0.00000000000000000005928 96.0
BYD1_k127_9179195_0 Sulfatase - - - 0.0000000000000000000000000000000000000000000003113 186.0
BYD1_k127_9198024_0 oligopeptide transporter, OPT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 514.0
BYD1_k127_9198024_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 518.0
BYD1_k127_9198024_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008319 373.0
BYD1_k127_9198024_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 325.0
BYD1_k127_9199835_0 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 398.0
BYD1_k127_9199835_1 Domain of unknown function (DUF4394) - - - 0.0001164 46.0
BYD1_k127_9271108_0 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007863 264.0
BYD1_k127_9298656_0 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007409 542.0
BYD1_k127_9298656_1 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002338 265.0
BYD1_k127_9304570_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004791 313.0
BYD1_k127_9304570_1 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000001189 77.0
BYD1_k127_9316041_0 Glutamate-cysteine ligase family 2(GCS2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 542.0
BYD1_k127_9316041_1 Redoxin - - - 0.0000000000000000000000000000000000000000000000004535 184.0
BYD1_k127_9316041_2 - - - - 0.0000000000000000000000000000001265 145.0
BYD1_k127_9316041_3 RNA polymerase sigma factor K03088 - - 0.000000000000000000000000003572 119.0
BYD1_k127_9316041_4 Endonuclease I - - - 0.000000001372 69.0
BYD1_k127_9316041_5 Glycosyl hydrolase family 70 K01142,K01176 - 3.1.11.2,3.2.1.1 0.00000000588 70.0
BYD1_k127_9330586_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K22345 GO:0000166,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9,4.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 387.0
BYD1_k127_9330586_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 336.0
BYD1_k127_9330586_2 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 319.0
BYD1_k127_9330586_3 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000385 282.0
BYD1_k127_9330586_4 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000002236 236.0
BYD1_k127_9330586_5 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000001461 220.0
BYD1_k127_9330586_6 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000006094 173.0
BYD1_k127_9330586_7 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000000000000000109 123.0
BYD1_k127_9333262_0 (ABC) transporter K15738 - - 1.86e-207 658.0
BYD1_k127_9341464_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1224.0
BYD1_k127_9341464_1 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000004434 231.0
BYD1_k127_9341464_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP) K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000001932 199.0
BYD1_k127_9341464_3 Glycosyl transferase family 41 - - - 0.000000000000000000000000006176 124.0
BYD1_k127_9341464_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.0006343 43.0
BYD1_k127_9370722_0 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 430.0
BYD1_k127_9370722_1 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002729 385.0
BYD1_k127_9370722_2 Pyridoxal-phosphate dependent enzyme - - - 0.0001677 48.0
BYD1_k127_9387919_0 NADH dehydrogenase (ubiquinone) activity K14089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003097 545.0
BYD1_k127_9391741_0 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004318 258.0
BYD1_k127_9391741_1 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000001187 159.0
BYD1_k127_939496_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 558.0
BYD1_k127_939496_1 Uncharacterized protein family (UPF0051) K09015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 385.0
BYD1_k127_939496_2 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 383.0
BYD1_k127_939496_3 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 357.0
BYD1_k127_939496_4 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000006271 181.0
BYD1_k127_939496_5 PaaD-like protein - - - 0.000000000000000000000000000000009809 138.0
BYD1_k127_939496_6 Iron-sulfur cluster insertion protein ErpA K15724 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0019538,GO:0022607,GO:0031163,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051539,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:1901564 - 0.000000000000000000000001119 109.0
BYD1_k127_939496_7 4Fe-4S single cluster domain of Ferredoxin I - - - 0.000000000000000000009675 93.0
BYD1_k127_941274_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.848e-244 794.0
BYD1_k127_941274_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 317.0
BYD1_k127_941274_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000007639 157.0
BYD1_k127_9417890_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008186 483.0
BYD1_k127_9417890_1 Belongs to the peptidase S41A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007765 282.0
BYD1_k127_9433719_0 PFAM aminotransferase, class I K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 471.0
BYD1_k127_9433719_1 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 322.0
BYD1_k127_9433719_2 Belongs to the glycosyl hydrolase 13 family - - - 0.000001333 62.0
BYD1_k127_9451678_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 404.0
BYD1_k127_9451678_1 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000001853 118.0
BYD1_k127_9451678_2 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000717 97.0
BYD1_k127_9454598_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0000000000000000000000000000000000002309 164.0
BYD1_k127_9454598_1 Pfam:Pyridox_oxidase - - - 0.0007442 43.0
BYD1_k127_9520423_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 452.0
BYD1_k127_9520423_1 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 425.0
BYD1_k127_9520423_2 glutamate-tRNA ligase activity K01885,K09698 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.17,6.1.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 368.0
BYD1_k127_9520423_3 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 323.0
BYD1_k127_9520423_4 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001571 296.0
BYD1_k127_9520423_5 photosystem I assembly BtpA K06971 - - 0.000000000000000000000000000000000000000000000000000000000000000001482 239.0
BYD1_k127_9520423_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000001066 209.0
BYD1_k127_9520423_7 Acetyltransferase (GNAT) domain - - - 0.00000008451 63.0
BYD1_k127_9520423_9 - - - - 0.00001355 48.0
BYD1_k127_9539836_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1631.0
BYD1_k127_9539836_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043,K13797 GO:0000428,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.0 1503.0
BYD1_k127_9539836_10 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000004247 56.0
BYD1_k127_9539836_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 432.0
BYD1_k127_9539836_3 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 301.0
BYD1_k127_9539836_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000002839 211.0
BYD1_k127_9539836_5 Participates in transcription elongation, termination and antitermination K02601 - - 0.00000000000000000000000000000000000000000000000000000000005995 210.0
BYD1_k127_9539836_6 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000004416 156.0
BYD1_k127_9539836_7 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000001973 134.0
BYD1_k127_9539836_8 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0040007,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000001867 98.0
BYD1_k127_9542076_0 Bacterial PH domain - - - 0.00000000000000000000000000000000000000000000000000000000000004759 222.0
BYD1_k127_9542076_1 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000007239 221.0
BYD1_k127_9542076_2 Protein of unknown function (DUF3224) - - - 0.00000000000000000000000000000000002039 139.0
BYD1_k127_9542076_3 PFAM Glyoxalase Bleomycin resistance protein Dioxygenase superfamily K07104 - 1.13.11.2 0.0000000000000000287 81.0
BYD1_k127_9549408_0 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009618 474.0
BYD1_k127_9549408_1 Bacterial protein of unknown function (DUF853) K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 458.0
BYD1_k127_9549408_10 Domain of unknown function (DUF4340) - - - 0.00003993 55.0
BYD1_k127_9549408_11 cellulase activity K01178,K14645,K18546 - 3.2.1.3 0.0002502 54.0
BYD1_k127_9549408_2 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 379.0
BYD1_k127_9549408_3 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 318.0
BYD1_k127_9549408_4 - K01992 - - 0.0000000000000000000000000000000000000000000000000000000002995 215.0
BYD1_k127_9549408_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000002336 196.0
BYD1_k127_9549408_6 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000001281 93.0
BYD1_k127_9549408_7 4 iron, 4 sulfur cluster binding - - - 0.000000000000002361 91.0
BYD1_k127_9549408_8 Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000003557 79.0
BYD1_k127_9549408_9 - - - - 0.000006889 59.0
BYD1_k127_956201_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 341.0
BYD1_k127_956201_1 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000001605 188.0
BYD1_k127_956201_2 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000002804 152.0
BYD1_k127_956201_3 Glycosyltransferase Family 4 - - - 0.000000000000000000000002127 117.0
BYD1_k127_9565450_0 lysine biosynthetic process via aminoadipic acid - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 368.0
BYD1_k127_9565450_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000009149 152.0
BYD1_k127_9601765_0 unfolded protein binding K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0018995,GO:0019219,GO:0019222,GO:0020003,GO:0022607,GO:0030430,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043531,GO:0043656,GO:0043657,GO:0043933,GO:0044085,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0065010,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 5.542e-269 840.0
BYD1_k127_9601765_1 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009598 329.0
BYD1_k127_9601765_2 Amidohydrolase family - - - 0.0000000000000000000000001018 121.0
BYD1_k127_9601765_3 Evidence 5 No homology to any previously reported sequences - - - 0.000000000006926 80.0
BYD1_k127_9603162_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003245 257.0
BYD1_k127_9603162_1 Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. The complementary strand guanine functions in substrate recognition. Required for DNA damage lesion repair in stationary-phase cells K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000000000001843 244.0
BYD1_k127_9603162_2 Alkylmercury lyase - - - 0.0000000000000000003934 93.0
BYD1_k127_9603162_3 Alkylmercury lyase - - - 0.000000002122 60.0
BYD1_k127_9607637_0 C-terminal, D2-small domain, of ClpB protein K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 511.0
BYD1_k127_9607637_1 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 GO:0000166,GO:0000287,GO:0000502,GO:0003674,GO:0003824,GO:0004175,GO:0004298,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0006950,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009266,GO:0009376,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016787,GO:0017076,GO:0019538,GO:0019904,GO:0022607,GO:0030163,GO:0030554,GO:0031597,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034214,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051259,GO:0051603,GO:0065003,GO:0070003,GO:0070011,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1904949,GO:1905368,GO:1905369 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000008298 220.0
BYD1_k127_9607637_2 Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000866 199.0
BYD1_k127_9607637_3 Bacterial Ig-like domain K07156 - - 0.00000000000006104 82.0
BYD1_k127_962493_0 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 317.0
BYD1_k127_962493_1 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 GO:0002790,GO:0003674,GO:0005048,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0031522,GO:0032940,GO:0032978,GO:0032991,GO:0033036,GO:0033218,GO:0033365,GO:0034613,GO:0042277,GO:0042886,GO:0042887,GO:0043952,GO:0044425,GO:0044459,GO:0044464,GO:0045047,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.00000000000000000000000000000000000000000000000000000000000000000002391 235.0
BYD1_k127_962493_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000004099 179.0
BYD1_k127_962493_3 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000002908 135.0
BYD1_k127_962493_4 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.0000000001539 62.0
BYD1_k127_9626345_0 Cytochrome c554 and c-prime - - - 3.309e-282 905.0
BYD1_k127_9626345_1 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 352.0
BYD1_k127_9626345_2 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000000002745 202.0
BYD1_k127_9626345_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07710 - 2.7.13.3 0.0000000000000000000000000000000000002447 159.0
BYD1_k127_9626345_4 ASPIC and UnbV - - - 0.000001018 58.0
BYD1_k127_9630037_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 2.543e-247 782.0
BYD1_k127_9630037_1 short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 582.0
BYD1_k127_9630037_2 Rieske (2fe-2S) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 440.0
BYD1_k127_9630037_3 Cysteine-rich CPXCG - - - 0.000000003827 59.0
BYD1_k127_9630037_4 COG0457 FOG TPR repeat - - - 0.000000686 59.0
BYD1_k127_9630411_0 Glycosyltransferase like family 2 K03606,K07011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 443.0
BYD1_k127_9630411_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 348.0
BYD1_k127_9630411_2 transferase activity, transferring glycosyl groups K00721,K03820 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007412 289.0
BYD1_k127_9630411_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 287.0
BYD1_k127_9630411_4 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000003757 273.0
BYD1_k127_9630411_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000002211 107.0
BYD1_k127_9630411_6 Uncharacterized conserved protein (DUF2304) K09153 - - 0.00000000000000001485 86.0
BYD1_k127_9630411_7 helix_turn_helix, arabinose operon control protein - - - 0.0000000267 67.0
BYD1_k127_9665337_0 Evidence 5 No homology to any previously reported sequences - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 314.0
BYD1_k127_9665337_1 Evidence 5 No homology to any previously reported sequences - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009266 269.0
BYD1_k127_9665337_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000001356 224.0
BYD1_k127_9665337_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000004422 143.0
BYD1_k127_966880_0 protoporphyrinogen oxidase activity K01854 - 5.4.99.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 572.0
BYD1_k127_966880_1 6-phospho-beta-galactosidase activity - - - 0.00000000000000000000000000000000000000000001255 166.0
BYD1_k127_966880_2 transferase activity, transferring glycosyl groups K01854,K07011 - 5.4.99.9 0.00000000000000000000000000000000000006144 147.0
BYD1_k127_9685145_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000003821 261.0
BYD1_k127_9685145_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.0000000000000000000000000000000000000000000000000000008556 205.0
BYD1_k127_9685145_2 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000916 150.0
BYD1_k127_9699453_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009994 538.0
BYD1_k127_9699453_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 398.0
BYD1_k127_9699453_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 394.0
BYD1_k127_9699453_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000001647 211.0
BYD1_k127_9699453_4 BNR repeat-like domain K05989 - 3.2.1.40 0.00000000000000000000004672 116.0
BYD1_k127_9699453_5 GCN5-related N-acetyl-transferase K06975 - - 0.000000008828 63.0
BYD1_k127_9699453_6 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00003322 54.0
BYD1_k127_971105_0 Membrane protein involved in the export of o-antigen and teichoic acid K03328 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 406.0
BYD1_k127_971105_1 TonB-dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000582 248.0
BYD1_k127_971105_2 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000001421 160.0
BYD1_k127_971286_0 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0000049,GO:0001522,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0031119,GO:0034337,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000002304 229.0
BYD1_k127_971286_1 DHH family K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000000000000001787 207.0
BYD1_k127_9738929_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000002081 240.0
BYD1_k127_9752980_0 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000001157 198.0
BYD1_k127_9785327_0 ATP-dependent DNA helicase activity K01144,K07464,K16898 - 3.1.11.5,3.1.12.1,3.6.4.12 0.0000000000000000000001135 106.0
BYD1_k127_9785327_1 PD-(D/E)XK nuclease superfamily - - - 0.0000000000000000514 96.0
BYD1_k127_9785327_2 AAA domain - - - 0.000009234 57.0
BYD1_k127_9785327_3 Putative peptidoglycan binding domain - - - 0.0001807 54.0
BYD1_k127_9790702_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 369.0
BYD1_k127_9790702_1 NYN domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 332.0
BYD1_k127_9790702_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759,K05606 - 4.4.1.5,5.1.99.1 0.00000000000000000000000000000000000006205 148.0
BYD1_k127_9790702_3 Lipase maturation factor - - - 0.0000000000003682 75.0
BYD1_k127_9803598_0 glyoxalase III activity - - - 0.000000000000000000000000000000000000000003351 166.0
BYD1_k127_9803598_1 arylsulfatase activity K01133 - 3.1.6.6 0.00000000000000000000000000000000000371 153.0
BYD1_k127_9803598_2 pyrroloquinoline quinone binding - - - 0.00000000001227 70.0
BYD1_k127_9805091_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000301 264.0
BYD1_k127_9805091_1 PFAM NAD-dependent epimerase dehydratase K15856 - 1.1.1.281 0.00000000000000000000000000000000000000000000000000000000000000000006567 242.0
BYD1_k127_9808372_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 524.0
BYD1_k127_9808372_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 523.0
BYD1_k127_9808372_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 509.0
BYD1_k127_9808372_3 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 374.0
BYD1_k127_9808372_4 Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 329.0
BYD1_k127_9808372_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000002189 174.0
BYD1_k127_9808372_6 Belongs to the SUA5 family K07566 - 2.7.7.87 0.0000000000000000000000000000000004264 141.0
BYD1_k127_9808372_7 Low molecular weight phosphotyrosine protein phosphatase K01104,K20201 - 3.1.3.48,3.9.1.2 0.0000000000000000000000000004008 123.0
BYD1_k127_9808372_8 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K13694,K13695 - 3.4.17.13 0.0000000000000000000000106 113.0
BYD1_k127_9808372_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000002505 78.0
BYD1_k127_9810252_0 component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1045.0
BYD1_k127_9810252_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 490.0
BYD1_k127_9810252_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000003606 250.0
BYD1_k127_9810252_3 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000007236 159.0
BYD1_k127_9810252_4 4-amino-4-deoxy-L-arabinose transferase activity K02277 - 1.9.3.1 0.00000000000000000000000000002127 131.0
BYD1_k127_9810252_5 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000001463 129.0
BYD1_k127_9810252_6 Putative zinc-finger - - - 0.0000000008915 68.0
BYD1_k127_9810252_7 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.00000002972 57.0
BYD1_k127_9810252_8 Pfam:DUF2029 - - - 0.0004208 52.0
BYD1_k127_9823575_0 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 428.0
BYD1_k127_9823575_1 Histidine kinase K13598 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000004161 216.0
BYD1_k127_9823575_2 PFAM glycoside hydrolase, family 13 domain protein - - - 0.000000007736 69.0
BYD1_k127_982827_0 Belongs to the glycosyl hydrolase 57 family K03406,K16149 GO:0000271,GO:0003674,GO:0003824,GO:0003844,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0055114,GO:0071704,GO:1901576 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 352.0
BYD1_k127_982827_1 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000009331 230.0
BYD1_k127_982827_2 pfkB family carbohydrate kinase - - - 0.0000007089 57.0
BYD1_k127_9828436_0 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000004978 247.0
BYD1_k127_9828436_1 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.000000000000000004615 94.0
BYD1_k127_9828436_2 Tetratricopeptide repeat - - - 0.00000000000002224 84.0
BYD1_k127_984801_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.889e-255 806.0
BYD1_k127_984801_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 9.155e-245 768.0
BYD1_k127_984801_10 - - - - 0.000008845 55.0
BYD1_k127_984801_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 419.0
BYD1_k127_984801_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008601 282.0
BYD1_k127_984801_4 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000003244 227.0
BYD1_k127_984801_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000000007759 187.0
BYD1_k127_984801_6 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000002355 153.0
BYD1_k127_984801_7 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000000000000000003097 149.0
BYD1_k127_984801_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.0000000000000000000000000000000002674 138.0
BYD1_k127_984801_9 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000001416 130.0
BYD1_k127_9852629_0 BAAT / Acyl-CoA thioester hydrolase C terminal K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 475.0
BYD1_k127_9852629_1 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 411.0
BYD1_k127_9852629_2 Putative member of DMT superfamily (DUF486) K09922 - - 0.0000000000000000000000000000000000000000000000000000006991 196.0
BYD1_k127_9852629_3 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000001781 185.0
BYD1_k127_9852629_4 - - - - 0.000000000000000000000000000000000000006176 152.0
BYD1_k127_9852629_5 Domain of unknown function (DUF4386) - - - 0.0000000000000000000000000003467 115.0
BYD1_k127_9869312_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 481.0
BYD1_k127_9869312_1 Penicillin-binding protein 5, C-terminal domain K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000002414 172.0
BYD1_k127_9869312_2 Cold shock K03704 - - 0.000000000000000000000005637 104.0
BYD1_k127_9869312_3 Alpha beta hydrolase - - - 0.00000000000000000000003254 103.0
BYD1_k127_9948665_0 Domain of unknown function (DUF4153) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 316.0
BYD1_k127_9948665_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000005283 190.0
BYD1_k127_9948665_2 PFAM glycosyl transferase group 1 - - - 0.000000000002869 72.0
BYD1_k127_9954834_0 (ABC) transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 390.0
BYD1_k127_9954834_1 Peptidase family M1 domain K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 380.0
BYD1_k127_9954834_2 protein conserved in bacteria K09927 - - 0.000000000000000000000000000000405 131.0
BYD1_k127_996308_0 Uncharacterized protein conserved in bacteria (DUF2330) - - - 0.00000000000000000006227 105.0
BYD1_k127_996308_1 cellulose binding - - - 0.000000000007199 77.0
BYD1_k127_996308_2 PFAM conserved K07027 - - 0.00005912 55.0
BYD1_k127_9981699_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 295.0
BYD1_k127_9981699_2 Serine threonine protein kinase - - - 0.00000004173 65.0
BYD1_k127_9985618_0 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005124 513.0
BYD1_k127_9985618_1 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006637 368.0
BYD1_k127_9985618_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000008928 218.0
BYD1_k127_9985618_3 - - - - 0.0000000000000000000000000000000000000000000000000000007795 199.0
BYD1_k127_9985618_4 HAD-hyrolase-like - - - 0.0000000000000000000000000000000000000183 153.0
BYD1_k127_9985618_5 Glycosyl transferases group 1 - - - 0.00000000000000773 77.0
BYD1_k127_9985618_6 blue (type 1) copper - - - 0.000000003505 64.0
BYD1_k127_9995052_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.0000000000000000000000000000000000000000000000000001397 194.0
BYD1_k127_9995052_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000004859 152.0
BYD1_k127_9995052_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000002369 114.0
BYD1_k127_9995052_3 Type ii and iii secretion system protein K02666 - - 0.00000000000000000000004937 101.0
BYD1_k127_9995052_4 Regulatory protein, FmdB family - - - 0.0000000000000000005943 91.0
BYD1_k127_9996597_0 phosphoglycerate kinase activity K00927,K01803 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3,5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 480.0
BYD1_k127_9996597_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 473.0
BYD1_k127_9996597_2 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001132 286.0
BYD1_k127_9996597_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000001538 269.0
BYD1_k127_9996597_4 Preprotein translocase SecG subunit K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000008185 77.0
BYD1_k127_9996597_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0003498 50.0