Overview

ID MAG00015
Name BYD1_bin.24
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Steroidobacterales
Family Steroidobacteraceae
Genus ZC4RG30
Species
Assembly information
Completeness (%) 73.38
Contamination (%) 0.61
GC content (%) 67.0
N50 (bp) 9,951
Genome size (bp) 2,931,845

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2788

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10034980_0 epoxide hydrolase K01253,K21159 - 3.3.2.9 4.972e-199 628.0
BYD1_k127_10034980_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 562.0
BYD1_k127_10034980_10 Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity K13771 - - 0.0000000000000000000000000000000000002362 151.0
BYD1_k127_10034980_2 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004883 492.0
BYD1_k127_10034980_3 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 361.0
BYD1_k127_10034980_4 CobW/HypB/UreG, nucleotide-binding domain K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 338.0
BYD1_k127_10034980_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004775 279.0
BYD1_k127_10034980_6 Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002349 226.0
BYD1_k127_10034980_7 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000000003427 225.0
BYD1_k127_10034980_8 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000001068 183.0
BYD1_k127_10034980_9 YCII-related domain - - - 0.000000000000000000000000000000000000000000005372 166.0
BYD1_k127_10047567_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008150,GO:0008152,GO:0009330,GO:0009987,GO:0016020,GO:0016043,GO:0019897,GO:0019898,GO:0022402,GO:0030541,GO:0032991,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0098813,GO:1901360,GO:1901363 - 2.099e-305 959.0
BYD1_k127_10047567_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 GO:0000819,GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006276,GO:0006725,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0022402,GO:0030541,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0098813,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 560.0
BYD1_k127_10047567_10 SCO1/SenC K07152 - - 0.00000000000000000000000000002741 126.0
BYD1_k127_10047567_11 - - - - 0.000000000000000000003845 104.0
BYD1_k127_10047567_12 Transcriptional regulator K15773 - - 0.0000000000000001374 82.0
BYD1_k127_10047567_13 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.000000000003569 74.0
BYD1_k127_10047567_2 PFAM HipA domain protein K07154 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 444.0
BYD1_k127_10047567_3 lysine 2,3-aminomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 374.0
BYD1_k127_10047567_4 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000765 338.0
BYD1_k127_10047567_5 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 318.0
BYD1_k127_10047567_6 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 310.0
BYD1_k127_10047567_7 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006304,GO:0006305,GO:0006306,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009007,GO:0009008,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0032775,GO:0034641,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044728,GO:0046483,GO:0071704,GO:0090304,GO:0140096,GO:0140097,GO:1901360,GO:1901564 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 289.0
BYD1_k127_10047567_8 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004183 273.0
BYD1_k127_10047567_9 cyclic-guanylate-specific phosphodiesterase activity K21025 - - 0.000000000000000000000000000000000000000000133 179.0
BYD1_k127_10089527_0 TIR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000128 240.0
BYD1_k127_10089527_1 cell adhesion K02650 - - 0.0000000000000000000000000000000000000001462 161.0
BYD1_k127_10089527_2 HipA-like C-terminal domain - - - 0.0000000000000000000000000000000000000002659 157.0
BYD1_k127_10121774_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 400.0
BYD1_k127_10121774_1 - - - - 0.0000000000000000000001651 111.0
BYD1_k127_10121774_2 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000002515 79.0
BYD1_k127_10121774_3 PFAM Hemolysin-type calcium-binding region - - - 0.0005154 48.0
BYD1_k127_10124982_0 arylsulfatase A K01130 - 3.1.6.1 4.312e-212 666.0
BYD1_k127_10124982_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 606.0
BYD1_k127_10124982_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004486,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0019752,GO:0034641,GO:0042558,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 359.0
BYD1_k127_10124982_3 Domain of unknown function (DUF1905) - - - 0.000000000000000000000000000000000000000000000000000000000000000000707 235.0
BYD1_k127_10156286_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 614.0
BYD1_k127_10156286_1 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069,K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 431.0
BYD1_k127_10156286_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 309.0
BYD1_k127_10156286_3 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000003464 186.0
BYD1_k127_10184330_1 Carboxylesterase family - - - 0.00000000000000000000000000000000000000000000000000000000004926 218.0
BYD1_k127_10184330_2 - - - - 0.0000000000000000000000000113 115.0
BYD1_k127_10184330_3 - - - - 0.00000000000000000000001079 107.0
BYD1_k127_10184330_4 - - - - 0.00000000000439 76.0
BYD1_k127_10287122_0 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 571.0
BYD1_k127_10287122_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 348.0
BYD1_k127_10287122_10 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0005221 45.0
BYD1_k127_10287122_2 Quinone oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006529 333.0
BYD1_k127_10287122_3 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 297.0
BYD1_k127_10287122_4 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000933 244.0
BYD1_k127_10287122_5 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000009484 186.0
BYD1_k127_10287122_6 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000006885 169.0
BYD1_k127_10287122_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000004332 154.0
BYD1_k127_10287122_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000005729 84.0
BYD1_k127_10287122_9 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000003967 73.0
BYD1_k127_10305381_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0 1287.0
BYD1_k127_10305381_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 475.0
BYD1_k127_10305381_2 Splits dipeptides with a prolyl residue in the C- terminal position K01271 - 3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 405.0
BYD1_k127_10305381_3 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 327.0
BYD1_k127_10305381_4 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000007397 166.0
BYD1_k127_10305381_5 Ribosomal protein L17 K02879 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000006912 164.0
BYD1_k127_10305381_6 -acetyltransferase - - - 0.00000000000000003073 88.0
BYD1_k127_10305381_7 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000003809 69.0
BYD1_k127_10305381_8 OmpA-like transmembrane domain - - - 0.000000003273 66.0
BYD1_k127_10316879_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004769 531.0
BYD1_k127_10316879_1 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 516.0
BYD1_k127_10316879_10 Lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000003892 241.0
BYD1_k127_10316879_11 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000006292 217.0
BYD1_k127_10316879_12 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000003482 215.0
BYD1_k127_10316879_13 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000008474 212.0
BYD1_k127_10316879_14 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000004709 209.0
BYD1_k127_10316879_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000002813 199.0
BYD1_k127_10316879_16 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000427 182.0
BYD1_k127_10316879_17 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000003183 179.0
BYD1_k127_10316879_18 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000002745 168.0
BYD1_k127_10316879_19 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000001834 156.0
BYD1_k127_10316879_2 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 411.0
BYD1_k127_10316879_20 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000002165 152.0
BYD1_k127_10316879_21 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000003235 150.0
BYD1_k127_10316879_22 membrane - - - 0.00000000000000000000000000000000000002287 148.0
BYD1_k127_10316879_23 DoxX-like family - - - 0.00000000000000000000000000000000000017 145.0
BYD1_k127_10316879_24 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000001367 137.0
BYD1_k127_10316879_25 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000004091 137.0
BYD1_k127_10316879_26 YCII-related domain - - - 0.000000000000000000000000000009319 129.0
BYD1_k127_10316879_27 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000001001 115.0
BYD1_k127_10316879_28 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000002465 107.0
BYD1_k127_10316879_29 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046677,GO:0050896,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000008395 95.0
BYD1_k127_10316879_3 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0000027,GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 404.0
BYD1_k127_10316879_30 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000001883 87.0
BYD1_k127_10316879_31 Ribosomal protein L30 K02907 - - 0.00000000000002104 74.0
BYD1_k127_10316879_32 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000002924 69.0
BYD1_k127_10316879_33 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000005778 65.0
BYD1_k127_10316879_4 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 319.0
BYD1_k127_10316879_5 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001642 287.0
BYD1_k127_10316879_6 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000124 271.0
BYD1_k127_10316879_7 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001638 256.0
BYD1_k127_10316879_8 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000001399 236.0
BYD1_k127_10316879_9 Forms part of the polypeptide exit tunnel K02926 GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000003119 237.0
BYD1_k127_10330096_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 GO:0000302,GO:0003674,GO:0003824,GO:0004802,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006098,GO:0006139,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009635,GO:0009636,GO:0009719,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010243,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016740,GO:0016744,GO:0019219,GO:0019222,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0019842,GO:0030145,GO:0030976,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0033554,GO:0034599,GO:0034614,GO:0034641,GO:0035690,GO:0036094,GO:0036245,GO:0042221,GO:0042493,GO:0042542,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0046496,GO:0046677,GO:0046872,GO:0046914,GO:0048037,GO:0048518,GO:0048522,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051156,GO:0051171,GO:0051173,GO:0051186,GO:0051252,GO:0051254,GO:0051716,GO:0055086,GO:0060255,GO:0065007,GO:0070301,GO:0070887,GO:0071236,GO:0071310,GO:0071417,GO:0071495,GO:0071704,GO:0072524,GO:0072747,GO:0072756,GO:0080090,GO:0097159,GO:0097237,GO:1901135,GO:1901322,GO:1901360,GO:1901363,GO:1901562,GO:1901564,GO:1901654,GO:1901655,GO:1901681,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 2.2.1.1 1.762e-279 876.0
BYD1_k127_10330096_1 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 2.394e-195 618.0
BYD1_k127_10330096_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 536.0
BYD1_k127_10330096_3 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.000000000000000000000000000000000000000000000000000000000000000000000000005342 267.0
BYD1_k127_10330096_4 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 0.0000000000000000000000000000000000000000000000000000000000000000008745 238.0
BYD1_k127_10330096_5 PFAM peptidase S16 lon domain protein K07157 - - 0.000000000000000000000000000000000000000000006421 173.0
BYD1_k127_10330096_6 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.0000000000000000000000000000000002139 134.0
BYD1_k127_10330096_7 - - - - 0.000006862 57.0
BYD1_k127_10358244_0 COG1063 Threonine dehydrogenase and related Zn-dependent dehydrogenases - - - 2.335e-197 624.0
BYD1_k127_10358244_1 Nad-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001495 262.0
BYD1_k127_10358244_2 Predicted integral membrane protein (DUF2269) - - - 0.0000000000000000000000000000000000000000000000000000000006166 211.0
BYD1_k127_10440182_0 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 591.0
BYD1_k127_10440182_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 450.0
BYD1_k127_10440182_10 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000001635 140.0
BYD1_k127_10440182_11 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000002201 130.0
BYD1_k127_10440182_12 Putative zinc-binding metallo-peptidase - - - 0.0000000000000000000000000113 115.0
BYD1_k127_10440182_13 SnoaL-like domain - - - 0.00000000000000000004446 97.0
BYD1_k127_10440182_14 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000009818 83.0
BYD1_k127_10440182_15 - - - - 0.0001591 47.0
BYD1_k127_10440182_2 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 415.0
BYD1_k127_10440182_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 425.0
BYD1_k127_10440182_4 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 341.0
BYD1_k127_10440182_5 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 334.0
BYD1_k127_10440182_6 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000349 248.0
BYD1_k127_10440182_7 Bile acid K03453 - - 0.00000000000000000000000000000000000000000000000000000000000000000002817 242.0
BYD1_k127_10440182_8 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000000000006322 196.0
BYD1_k127_10440182_9 PAS domain - - - 0.0000000000000000000000000000000000000002513 168.0
BYD1_k127_1047216_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 3.054e-208 653.0
BYD1_k127_1047216_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 483.0
BYD1_k127_1047216_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 323.0
BYD1_k127_1047216_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004008 299.0
BYD1_k127_1047216_4 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 292.0
BYD1_k127_1047216_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.000000000000000000000000000000000000000000001458 168.0
BYD1_k127_1047216_6 Preprotein translocase K03075 - - 0.0000000000000000000409 95.0
BYD1_k127_1047216_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.0000000004082 66.0
BYD1_k127_1047744_0 Pyridine nucleotide-disulphide oxidoreductase K00266 - 1.4.1.13,1.4.1.14 8.569e-198 621.0
BYD1_k127_1047744_1 Amidohydrolase K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000008873 194.0
BYD1_k127_1047744_2 - - - - 0.000000000000000005082 94.0
BYD1_k127_10489728_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 418.0
BYD1_k127_10489728_1 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 335.0
BYD1_k127_10489728_2 ABC transporter K02013,K05776 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000003336 272.0
BYD1_k127_10489728_3 PFAM Phenazine biosynthesis PhzC PhzF protein - - - 0.000000000000000000000000000000000000000000000000000000000001288 220.0
BYD1_k127_10489728_4 TonB-dependent receptor plug K02014 - - 0.00000000000000000000000000000000000000000000000002533 186.0
BYD1_k127_10489728_5 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000001011 170.0
BYD1_k127_10489728_6 Beta-lactamase - - - 0.0000000104 65.0
BYD1_k127_10567911_0 Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA K01638 - 2.3.3.9 7.297e-291 909.0
BYD1_k127_10567911_1 mechanosensitive ion channel K05802 - - 5.983e-218 702.0
BYD1_k127_10567911_10 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 303.0
BYD1_k127_10567911_11 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005021 244.0
BYD1_k127_10567911_12 Haem-degrading K11477 - - 0.000000000000000000000000000000000000000283 153.0
BYD1_k127_10567911_13 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000001972 141.0
BYD1_k127_10567911_14 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000004077 132.0
BYD1_k127_10567911_16 Protein of unknown function (DUF2909) - - - 0.0000000576 60.0
BYD1_k127_10567911_18 - - - - 0.00007901 46.0
BYD1_k127_10567911_2 TonB-dependent Receptor Plug Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 608.0
BYD1_k127_10567911_3 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 581.0
BYD1_k127_10567911_4 DNA mediated transformation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009933 588.0
BYD1_k127_10567911_5 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 537.0
BYD1_k127_10567911_6 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 434.0
BYD1_k127_10567911_7 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 430.0
BYD1_k127_10567911_8 PFAM aromatic amino acid K00500 GO:0003674,GO:0003824,GO:0004497,GO:0004505,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016714,GO:0055114 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 409.0
BYD1_k127_10567911_9 Domain of Unknown Function (DUF349) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 419.0
BYD1_k127_10594387_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1635.0
BYD1_k127_10594387_1 Circularly permuted ATP-grasp type 2 - - - 1.048e-281 894.0
BYD1_k127_10594387_2 Circularly permuted ATP-grasp type 2 - - - 7.296e-226 710.0
BYD1_k127_10594387_3 A predicted alpha-helical domain with a conserved ER motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001594 282.0
BYD1_k127_10594387_4 Bacterial transglutaminase-like N-terminal region - - - 0.0004055 49.0
BYD1_k127_10605347_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1311.0
BYD1_k127_10605347_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 8.676e-321 1004.0
BYD1_k127_10605347_10 transport systems K02033,K15581 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 373.0
BYD1_k127_10605347_11 transport systems K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 326.0
BYD1_k127_10605347_12 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003336 269.0
BYD1_k127_10605347_13 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000009474 227.0
BYD1_k127_10605347_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000001091 219.0
BYD1_k127_10605347_15 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000006734 213.0
BYD1_k127_10605347_16 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000006676 143.0
BYD1_k127_10605347_17 TonB dependent receptor - - - 0.00000000000000000000000007214 113.0
BYD1_k127_10605347_18 Regulatory protein, FmdB family - - - 0.0000000000000000000000009584 108.0
BYD1_k127_10605347_19 ThiS family K03636 - - 0.000000000000000000001499 106.0
BYD1_k127_10605347_2 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 6.925e-262 835.0
BYD1_k127_10605347_3 extracellular solute-binding protein K02035,K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 613.0
BYD1_k127_10605347_4 belongs to the aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 595.0
BYD1_k127_10605347_5 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 584.0
BYD1_k127_10605347_6 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008144 579.0
BYD1_k127_10605347_7 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 457.0
BYD1_k127_10605347_8 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 398.0
BYD1_k127_10605347_9 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 374.0
BYD1_k127_10636788_0 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 547.0
BYD1_k127_10636788_1 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 531.0
BYD1_k127_10636788_10 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000005378 162.0
BYD1_k127_10636788_11 Polysaccharide pyruvyl transferase - - - 0.000000000000000000000000000000000001673 153.0
BYD1_k127_10636788_12 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000002399 144.0
BYD1_k127_10636788_13 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000002703 125.0
BYD1_k127_10636788_14 Cytochrome c - - - 0.00000000000000000000000001078 116.0
BYD1_k127_10636788_15 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000173 110.0
BYD1_k127_10636788_16 Membrane fusogenic activity K09806 - - 0.00000000002599 66.0
BYD1_k127_10636788_17 L-lactate permease K03303 - - 0.000000001287 59.0
BYD1_k127_10636788_2 Mg chelatase-related protein K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006254 450.0
BYD1_k127_10636788_3 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 335.0
BYD1_k127_10636788_4 Belongs to the 'phage' integrase family. XerC subfamily K03733 GO:0000150,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006276,GO:0006310,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008907,GO:0009009,GO:0009037,GO:0009987,GO:0015074,GO:0032991,GO:0034641,GO:0042150,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0071139,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002819 318.0
BYD1_k127_10636788_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001927 286.0
BYD1_k127_10636788_6 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001894 258.0
BYD1_k127_10636788_7 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000004902 248.0
BYD1_k127_10636788_8 Response regulator of the LytR AlgR family K08083 - - 0.00000000000000000000000000000000000000000000000000000000000001953 222.0
BYD1_k127_10636788_9 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000000002477 170.0
BYD1_k127_10645529_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.197e-229 721.0
BYD1_k127_10645529_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007338 270.0
BYD1_k127_10645529_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000007486 267.0
BYD1_k127_10708349_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1272.0
BYD1_k127_10708349_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 9.149e-242 756.0
BYD1_k127_10708349_2 Major facilitator Superfamily K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 430.0
BYD1_k127_10708349_3 PFAM Transglutaminase-like K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 394.0
BYD1_k127_10708349_4 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006621 367.0
BYD1_k127_10708349_5 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000002266 194.0
BYD1_k127_10708349_6 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000001449 139.0
BYD1_k127_10708349_7 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.00000000000000000001992 98.0
BYD1_k127_10718423_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 3.967e-211 667.0
BYD1_k127_10718423_1 acetolactate synthase K01652 GO:0000287,GO:0003674,GO:0003824,GO:0003984,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0019842,GO:0030976,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901681 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 379.0
BYD1_k127_10718423_10 carboxylic ester hydrolase activity - - - 0.000008685 55.0
BYD1_k127_10718423_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006849 273.0
BYD1_k127_10718423_3 - - - - 0.000000000000000000000000000000000000000000008065 172.0
BYD1_k127_10718423_4 Protein tyrosine kinase K08884 - 2.7.11.1 0.000000000000000000000000000000000002222 158.0
BYD1_k127_10718423_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000002953 158.0
BYD1_k127_10718423_6 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000001503 89.0
BYD1_k127_10718423_7 PFAM Forkhead-associated protein - - - 0.00000000000019 81.0
BYD1_k127_10718423_8 - - - - 0.0000000007792 70.0
BYD1_k127_10718423_9 PFAM Integral membrane protein TerC K05794 - - 0.000001215 54.0
BYD1_k127_10769269_0 phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007116 417.0
BYD1_k127_10769269_1 Retinal pigment epithelial membrane protein K11159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001499 280.0
BYD1_k127_10769269_2 - - - - 0.00000000000000000000000000000000000000000000000000000001732 213.0
BYD1_k127_10769269_3 Acid phosphatase K09474 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.1.3.2 0.000000000000000000000000000000000000000000000000000004299 195.0
BYD1_k127_10769269_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000001844 160.0
BYD1_k127_10769560_0 Circularly permuted ATP-grasp type 2 - - - 4.459e-229 726.0
BYD1_k127_10769560_1 signal peptide peptidase K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 451.0
BYD1_k127_10769560_10 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000006115 123.0
BYD1_k127_10769560_11 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000001106 102.0
BYD1_k127_10769560_2 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 420.0
BYD1_k127_10769560_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 344.0
BYD1_k127_10769560_4 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004587 284.0
BYD1_k127_10769560_5 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001524 262.0
BYD1_k127_10769560_6 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000001662 246.0
BYD1_k127_10769560_7 peptidase m48, ste24p - - - 0.00000000000000000000000000000000000000000000000000000601 203.0
BYD1_k127_10769560_8 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000001084 168.0
BYD1_k127_10769560_9 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000005102 138.0
BYD1_k127_1078266_0 Major Facilitator - - - 4.149e-217 680.0
BYD1_k127_1078266_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 314.0
BYD1_k127_1078266_10 membrane protein domain - - - 0.0000000000000000000000000000000000005259 153.0
BYD1_k127_1078266_11 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000002976 151.0
BYD1_k127_1078266_12 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000551 121.0
BYD1_k127_1078266_13 TIGRFAM YihY family protein (not ribonuclease BN) K07058 - - 0.00000000000000000000000007224 118.0
BYD1_k127_1078266_14 Transglutaminase/protease-like homologues - - - 0.000000000000006584 81.0
BYD1_k127_1078266_15 pathogenesis - - - 0.000000000104 72.0
BYD1_k127_1078266_16 PRC-barrel domain - - - 0.0000262 57.0
BYD1_k127_1078266_3 receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 299.0
BYD1_k127_1078266_4 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008724 285.0
BYD1_k127_1078266_5 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000001452 243.0
BYD1_k127_1078266_6 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000175 179.0
BYD1_k127_1078266_7 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000001212 189.0
BYD1_k127_1078266_9 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000006128 151.0
BYD1_k127_10832633_0 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 389.0
BYD1_k127_10832633_1 Pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 357.0
BYD1_k127_10832633_2 pilus assembly protein PilN K02663 - - 0.0000000000001281 74.0
BYD1_k127_1083478_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 1.095e-231 749.0
BYD1_k127_1083478_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 465.0
BYD1_k127_1083478_10 LysR substrate binding domain - - - 0.00000000000000001016 95.0
BYD1_k127_1083478_11 polysaccharide localization K01017,K09672,K09673 GO:0003674,GO:0003824,GO:0008146,GO:0016740,GO:0016782 2.8.2.5 0.0000002501 62.0
BYD1_k127_1083478_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 314.0
BYD1_k127_1083478_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001598 261.0
BYD1_k127_1083478_4 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000002395 218.0
BYD1_k127_1083478_5 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000001646 181.0
BYD1_k127_1083478_6 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000000000000000000000000000000000002519 168.0
BYD1_k127_1083478_7 Psort location CytoplasmicMembrane, score K09793 - - 0.000000000000000000000000000000000000003287 165.0
BYD1_k127_1083478_8 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000002448 137.0
BYD1_k127_1083478_9 protein conserved in bacteria - - - 0.0000000000000000000001775 97.0
BYD1_k127_10868051_0 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 7.567e-198 625.0
BYD1_k127_10868051_1 Belongs to the xylose isomerase family K01805 GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 0.0000000000000000000000000000000000000000000000002731 177.0
BYD1_k127_10887767_0 DNA helicase K03657 - 3.6.4.12 6.546e-228 725.0
BYD1_k127_10887767_1 Homospermidine synthase K00808 - 2.5.1.44 1.125e-218 686.0
BYD1_k127_10887767_10 Predicted permease YjgP/YjgQ family K07091 - - 0.00000000000000000000000000000001787 134.0
BYD1_k127_10887767_2 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 9.131e-201 650.0
BYD1_k127_10887767_3 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 304.0
BYD1_k127_10887767_4 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007767 272.0
BYD1_k127_10887767_5 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000008006 267.0
BYD1_k127_10887767_6 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003132 246.0
BYD1_k127_10887767_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000006059 216.0
BYD1_k127_10887767_8 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000008779 212.0
BYD1_k127_10887767_9 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000006367 187.0
BYD1_k127_1093619_0 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen K11159 - - 6.011e-221 694.0
BYD1_k127_1093619_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 6.203e-194 613.0
BYD1_k127_1093619_2 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007106 469.0
BYD1_k127_1093619_3 Extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 449.0
BYD1_k127_1093619_4 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001121 280.0
BYD1_k127_1093619_5 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001162 250.0
BYD1_k127_1093619_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000001737 147.0
BYD1_k127_1093619_7 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.0000000000000000000000000000000004175 133.0
BYD1_k127_1093619_8 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000000006461 70.0
BYD1_k127_10941011_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1151.0
BYD1_k127_10941011_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 2.935e-253 790.0
BYD1_k127_10941011_2 Endonuclease/Exonuclease/phosphatase family - - - 0.00002564 52.0
BYD1_k127_109726_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 568.0
BYD1_k127_109726_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 441.0
BYD1_k127_109726_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 412.0
BYD1_k127_109726_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 336.0
BYD1_k127_109726_4 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002738 323.0
BYD1_k127_109726_5 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008895 312.0
BYD1_k127_109726_6 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006033 261.0
BYD1_k127_109726_7 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000004242 194.0
BYD1_k127_109726_8 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000001753 159.0
BYD1_k127_109726_9 ATPase or kinase K06925 - - 0.000000000000000000000000000000008065 136.0
BYD1_k127_11001819_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 4.957e-227 716.0
BYD1_k127_11001819_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005604 512.0
BYD1_k127_11001819_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 458.0
BYD1_k127_11001819_3 Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007134 421.0
BYD1_k127_11001819_4 PFAM UBA THIF-type NAD FAD binding protein K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 344.0
BYD1_k127_11001819_5 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 348.0
BYD1_k127_11001819_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 320.0
BYD1_k127_11001819_7 KR domain - - - 0.0000000000000000000008077 107.0
BYD1_k127_11006703_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 355.0
BYD1_k127_11006703_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 GO:0003674,GO:0003824,GO:0004853,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.37 0.000000000000000000000000000000000000000000000002159 181.0
BYD1_k127_11006703_2 PFAM Abortive infection protein K07052 - - 0.00000001997 65.0
BYD1_k127_11027176_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 557.0
BYD1_k127_11027176_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000001522 162.0
BYD1_k127_11034763_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002773 531.0
BYD1_k127_11034763_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 495.0
BYD1_k127_11034763_2 helix_turn_helix, arabinose operon control protein K04033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005905 263.0
BYD1_k127_11034763_3 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000002598 230.0
BYD1_k127_11034763_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000006811 199.0
BYD1_k127_11034763_5 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000006083 171.0
BYD1_k127_11034763_6 Biopolymer K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000007114 138.0
BYD1_k127_11034763_7 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000002087 142.0
BYD1_k127_11059636_0 Periplasmic binding protein-like domain K02058,K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 474.0
BYD1_k127_11059636_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 441.0
BYD1_k127_11059636_2 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 430.0
BYD1_k127_11059636_3 PFAM Short-chain dehydrogenase reductase SDR K22185 - 1.1.1.175 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 338.0
BYD1_k127_11059636_4 ABC transporter K02056 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008507 331.0
BYD1_k127_11065921_0 GTP-binding protein TypA K06207 - - 1.887e-277 866.0
BYD1_k127_11065921_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000003257 207.0
BYD1_k127_11065921_2 diguanylate cyclase - - - 0.00000001487 56.0
BYD1_k127_11089884_0 Helicase K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006827 383.0
BYD1_k127_11089884_1 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 383.0
BYD1_k127_11089884_2 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 304.0
BYD1_k127_11089884_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006634 284.0
BYD1_k127_11089884_4 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032153,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000001342 210.0
BYD1_k127_11089884_5 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000000000000000000000000000003242 166.0
BYD1_k127_11089884_6 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000003024 143.0
BYD1_k127_1109499_0 Chromate Ion Transporter K07240 - - 1.273e-221 694.0
BYD1_k127_1109499_1 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 1.92e-221 698.0
BYD1_k127_1109499_10 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 323.0
BYD1_k127_1109499_11 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002153 293.0
BYD1_k127_1109499_12 Outer Membrane Lipoprotein K03098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003558 248.0
BYD1_k127_1109499_13 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000000001686 203.0
BYD1_k127_1109499_14 ADP-Ribose Pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000811 207.0
BYD1_k127_1109499_15 Diguanylate cyclase K03320 - - 0.00000000000000000000000000000000000000000000000000000001108 220.0
BYD1_k127_1109499_16 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000001438 207.0
BYD1_k127_1109499_17 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000000000001312 164.0
BYD1_k127_1109499_18 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000004673 157.0
BYD1_k127_1109499_19 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000009148 130.0
BYD1_k127_1109499_2 FAD dependent oxidoreductase K06954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 588.0
BYD1_k127_1109499_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000004665 132.0
BYD1_k127_1109499_21 Protein of unknown function (DUF2878) - - - 0.00000000000000000000000002798 117.0
BYD1_k127_1109499_22 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000003621 75.0
BYD1_k127_1109499_23 response regulator receiver K07667 - - 0.00006318 45.0
BYD1_k127_1109499_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 546.0
BYD1_k127_1109499_4 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 483.0
BYD1_k127_1109499_5 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 475.0
BYD1_k127_1109499_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 399.0
BYD1_k127_1109499_7 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 377.0
BYD1_k127_1109499_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 363.0
BYD1_k127_1109499_9 Chromate resistance - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 330.0
BYD1_k127_11133603_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003554 379.0
BYD1_k127_11133603_1 NAD(P)H-binding - - - 0.0000000000000000000002542 108.0
BYD1_k127_11133603_2 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.0000000000000000001198 92.0
BYD1_k127_11133603_3 protein kinase activity - - - 0.00000006004 65.0
BYD1_k127_11133603_4 - - - - 0.0000001157 62.0
BYD1_k127_11159198_0 'PFAM Alpha amylase, catalytic K00690 GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006066,GO:0006073,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016757,GO:0019400,GO:0019751,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0051472,GO:0071704,GO:1901615 2.4.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 594.0
BYD1_k127_11159198_1 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 327.0
BYD1_k127_11159198_2 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002571 301.0
BYD1_k127_11159198_3 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000232 122.0
BYD1_k127_11159198_4 Nucleotidyltransferase domain K07075 - - 0.000000000000000000000000007842 113.0
BYD1_k127_11169168_0 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002572 482.0
BYD1_k127_11169168_1 Bacterial extracellular solute-binding protein K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 354.0
BYD1_k127_11169168_2 ABC-type tungstate transport system, periplasmic component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 306.0
BYD1_k127_11169168_3 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004021 284.0
BYD1_k127_11169168_4 Thioredoxin-like [2Fe-2S] ferredoxin K00127 - - 0.00000000000000000000000000000000000000000000000000000000000005468 218.0
BYD1_k127_11169168_5 ligase activity, forming carbon-carbon bonds K07402 - - 0.000004319 50.0
BYD1_k127_11181765_0 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009379 271.0
BYD1_k127_11181765_1 (ABC) transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000002463 228.0
BYD1_k127_11181765_2 abc transporter atp-binding protein K01990 - - 0.00000000000000000000000000000000000006019 144.0
BYD1_k127_11181765_3 - K01992 - - 0.00000000000000000000000000000803 133.0
BYD1_k127_11182156_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1189.0
BYD1_k127_11182156_1 Dehydrogenase K00117 - 1.1.5.2 3.366e-233 744.0
BYD1_k127_11182156_10 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000002271 243.0
BYD1_k127_11182156_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000000007906 229.0
BYD1_k127_11182156_12 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000001857 230.0
BYD1_k127_11182156_13 - - - - 0.000000000000000000000000000000000000000000000000000000002117 205.0
BYD1_k127_11182156_14 Belongs to the peptidase S11 family K07258,K07262 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000001429 211.0
BYD1_k127_11182156_15 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000001048 197.0
BYD1_k127_11182156_16 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000001785 190.0
BYD1_k127_11182156_17 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.0000000000000000000000000000000000000000000008123 169.0
BYD1_k127_11182156_18 Sel1 domain protein repeat-containing protein K07126 - - 0.00000000000000000000000000000000000000000003208 173.0
BYD1_k127_11182156_19 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000006331 136.0
BYD1_k127_11182156_2 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 2.382e-213 671.0
BYD1_k127_11182156_20 Transporter associated domain K06189 - - 0.000000000000000000000000004653 113.0
BYD1_k127_11182156_21 Pentapeptide repeats (8 copies) - - - 0.00000000000000000000005928 105.0
BYD1_k127_11182156_22 Protein of unknown function (DUF3617) - - - 0.00000000000001475 86.0
BYD1_k127_11182156_3 modulator of DNA gyrase K03568 - - 3.89e-213 671.0
BYD1_k127_11182156_4 ribonuclease, Rne Rng family K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 565.0
BYD1_k127_11182156_5 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 486.0
BYD1_k127_11182156_6 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 420.0
BYD1_k127_11182156_7 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 350.0
BYD1_k127_11182156_8 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 319.0
BYD1_k127_11182156_9 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 291.0
BYD1_k127_11212632_0 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 1.519e-286 886.0
BYD1_k127_11212632_1 Histidine kinase K10125 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002301 291.0
BYD1_k127_11212632_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000608 228.0
BYD1_k127_11212632_3 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000029 99.0
BYD1_k127_11212632_4 PFAM zinc finger, DksA TraR C4-type - - - 0.00000000000002106 78.0
BYD1_k127_11218114_0 PFAM TadE family protein - - - 0.0000000000000000000000000000000000000000000000005481 191.0
BYD1_k127_11218114_1 Pilus assembly protein K02279 - - 0.000000000000000000003191 105.0
BYD1_k127_11218114_2 - - - - 0.00000000007037 64.0
BYD1_k127_11218114_3 - - - - 0.0000071 58.0
BYD1_k127_11250724_0 response regulator receiver K07713,K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 474.0
BYD1_k127_11250724_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004218 312.0
BYD1_k127_11250724_2 Permease YjgP YjgQ K11720 - - 0.00000002173 61.0
BYD1_k127_11250724_3 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000001316 53.0
BYD1_k127_11280025_0 Oxidoreductase FAD-binding domain K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 404.0
BYD1_k127_11280025_1 Belongs to the prokaryotic GSH synthase family K01920 GO:0003674,GO:0003824,GO:0004363,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006518,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0019184,GO:0034641,GO:0042398,GO:0043043,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044424,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901564,GO:1901566,GO:1901576 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 366.0
BYD1_k127_11280025_10 Methyltransferase - - - 0.0000000000000000000000000000007655 136.0
BYD1_k127_11280025_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.000000000000000000000000000001245 127.0
BYD1_k127_11280025_12 TIGRFAM TonB K03832 - - 0.00000000000000000000000000849 127.0
BYD1_k127_11280025_2 chemotaxis protein K02660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 366.0
BYD1_k127_11280025_3 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 302.0
BYD1_k127_11280025_4 response regulator receiver K02487,K06596 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001456 280.0
BYD1_k127_11280025_5 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000009967 221.0
BYD1_k127_11280025_6 response regulator K02657 - - 0.0000000000000000000000000000000000000000000000000000000000001682 214.0
BYD1_k127_11280025_7 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000001411 194.0
BYD1_k127_11280025_8 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000000000001005 154.0
BYD1_k127_11280025_9 Two component signalling adaptor domain K02659 - - 0.0000000000000000000000000000000003949 139.0
BYD1_k127_11312241_0 Alpha-L-arabinofuranosidase C-terminal domain K01209 - 3.2.1.55 8.151e-233 738.0
BYD1_k127_11312241_1 phospholipase Carboxylesterase - - - 0.000000000000000005957 95.0
BYD1_k127_11312241_2 Transcriptional K05817 GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000002035 79.0
BYD1_k127_11323279_0 amidase activity K01426 - 3.5.1.4 1.205e-283 885.0
BYD1_k127_11323279_1 DNA topological change - - - 8.727e-252 807.0
BYD1_k127_11323279_2 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 594.0
BYD1_k127_11323279_3 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 406.0
BYD1_k127_11323279_4 creatininase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000001069 252.0
BYD1_k127_11323279_5 - - - - 0.00000000000000004227 84.0
BYD1_k127_11400027_0 aminotransferase K14287 - 2.6.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008967 410.0
BYD1_k127_11400027_1 Putrescine transport system permease K11075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 366.0
BYD1_k127_11400027_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007616 331.0
BYD1_k127_11400027_3 Binding-protein-dependent transport system inner membrane component K11070,K11074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 322.0
BYD1_k127_11400027_4 PFAM Cys Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001075 291.0
BYD1_k127_11400027_5 polyphosphate glucokinase K00845,K00886 - 2.7.1.2,2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000002331 235.0
BYD1_k127_11400027_6 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000009774 198.0
BYD1_k127_11400027_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000156 184.0
BYD1_k127_11400027_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.0000000000000000000000000000000005072 133.0
BYD1_k127_11400027_9 Protein of unknown function (DUF3106) - - - 0.00000000000002737 80.0
BYD1_k127_11444415_0 Methyltransferase domain - - - 0.00000000000000008317 85.0
BYD1_k127_11444415_1 O-Antigen ligase - - - 0.000000589 62.0
BYD1_k127_11444415_2 Polysaccharide biosynthesis protein - - - 0.000001979 60.0
BYD1_k127_11467655_0 Alpha-L-arabinofuranosidase K01209 - 3.2.1.55 2.671e-226 710.0
BYD1_k127_11467655_1 ABC-type sugar transport system, periplasmic component K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 435.0
BYD1_k127_11467655_2 ABC-type sugar transport system, permease component K02026 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004212 379.0
BYD1_k127_11467655_3 Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 342.0
BYD1_k127_11467655_4 phospholipase Carboxylesterase - - - 0.0000000000000000000000000000374 129.0
BYD1_k127_11467655_5 Belongs to the ABC transporter superfamily K10112 - - 0.000000000000000000002303 96.0
BYD1_k127_11485156_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007772 308.0
BYD1_k127_11485156_1 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005304 282.0
BYD1_k127_11485156_2 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.00000000000000000000000000000000000002571 152.0
BYD1_k127_11485156_3 OmpA-like transmembrane domain - - - 0.0000000000000000001248 96.0
BYD1_k127_11485156_4 Ankyrin repeats (many copies) - - - 0.000000000000000007949 98.0
BYD1_k127_11485156_5 CsbD-like - - - 0.00000000000000001338 83.0
BYD1_k127_11485156_6 Periplasmic or secreted lipoprotein K04065 - - 0.00000000000000003662 87.0
BYD1_k127_11551708_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001757 494.0
BYD1_k127_11551708_1 Permease YjgP YjgQ K11720 - - 0.000000000000000000004064 102.0
BYD1_k127_11552850_0 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 463.0
BYD1_k127_11552850_1 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000485 204.0
BYD1_k127_11552850_2 Protein of unknown function (DUF421) - - - 0.0000000000000000000000000000000000000000000000000001537 190.0
BYD1_k127_11552850_3 Protein tyrosine kinase - - - 0.00000000000008511 85.0
BYD1_k127_11564907_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 8.172e-221 694.0
BYD1_k127_11564907_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 601.0
BYD1_k127_11564907_10 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.000000000000000000000001963 110.0
BYD1_k127_11564907_11 cAMP biosynthetic process - - - 0.0000000000000000000002494 111.0
BYD1_k127_11564907_12 Multidrug ABC transporter ATP-binding protein K01990 - - 0.0000000000000008983 78.0
BYD1_k127_11564907_13 ABC-2 family transporter protein - - - 0.00000000000000648 86.0
BYD1_k127_11564907_2 Glucose / Sorbosone dehydrogenase K00117,K21430 - 1.1.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 407.0
BYD1_k127_11564907_3 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 379.0
BYD1_k127_11564907_4 ABC-type multidrug transport system, ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 334.0
BYD1_k127_11564907_5 of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 297.0
BYD1_k127_11564907_6 HupE / UreJ protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001449 245.0
BYD1_k127_11564907_7 PFAM regulatory protein GntR HTH K07979 - - 0.00000000000000000000000000000000006039 138.0
BYD1_k127_11564907_8 - - - - 0.00000000000000000000000000003938 124.0
BYD1_k127_11564907_9 Histidine kinase K02480,K07683 - 2.7.13.3 0.0000000000000000000000000008203 130.0
BYD1_k127_11628382_0 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007103 404.0
BYD1_k127_11628382_1 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 312.0
BYD1_k127_11628382_2 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001008 296.0
BYD1_k127_11628382_3 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000000000001185 219.0
BYD1_k127_11628382_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000001193 216.0
BYD1_k127_11628382_5 Pfam:PNPOx_C K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000001261 192.0
BYD1_k127_11628382_6 - - - - 0.0000000000000003426 87.0
BYD1_k127_11628382_7 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000001018 59.0
BYD1_k127_11629485_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000399 214.0
BYD1_k127_11629485_1 Colicin V production protein K03558 - - 0.000000000000000000000006983 107.0
BYD1_k127_11629485_2 Sporulation related domain K03749 - - 0.0000005617 58.0
BYD1_k127_11696748_0 PFAM Extradiol ring-cleavage dioxygenase, class III K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000204 258.0
BYD1_k127_11696748_1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000006978 218.0
BYD1_k127_11696748_2 Aromatic-ring-opening dioxygenase LigAB, LigA subunit - - - 0.00000000000000000000000005451 115.0
BYD1_k127_11715653_0 siderophore transport K02014 - - 1.548e-213 689.0
BYD1_k127_11715653_1 4-hydroxybenzoate 3-monooxygenase K00481 - 1.14.13.2 2.657e-198 622.0
BYD1_k127_11715653_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 385.0
BYD1_k127_11715653_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 294.0
BYD1_k127_1174048_0 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 304.0
BYD1_k127_1174048_1 ATP-grasp domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009062 256.0
BYD1_k127_11741773_0 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 478.0
BYD1_k127_11741773_1 6-phosphogluconate dehydrogenase (decarboxylating) K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 435.0
BYD1_k127_11741773_2 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 336.0
BYD1_k127_11741773_3 FAD binding domain K03391,K05712 - 1.14.13.127,1.14.13.50 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 347.0
BYD1_k127_11741773_4 Ceramidase - - - 0.000000000000000000000000000000000000000000000000000000000000009482 228.0
BYD1_k127_11741773_5 PFAM Tetratricopeptide repeat - - - 0.0003277 47.0
BYD1_k127_11748218_0 Flavin containing amine oxidoreductase - - - 9.096e-239 746.0
BYD1_k127_11763171_0 TonB dependent receptor K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 530.0
BYD1_k127_11763171_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 469.0
BYD1_k127_11763171_2 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 451.0
BYD1_k127_11763171_3 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 418.0
BYD1_k127_11763171_4 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000002137 144.0
BYD1_k127_11838634_0 Large extracellular alpha-helical protein K06894 - - 0.0 1127.0
BYD1_k127_11838634_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 514.0
BYD1_k127_11838634_10 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000001014 72.0
BYD1_k127_11838634_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001643 293.0
BYD1_k127_11838634_3 MOSC N-terminal beta barrel domain K07140 - - 0.00000000000000000000000000000000000000000000000000000000001823 222.0
BYD1_k127_11838634_4 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000007187 218.0
BYD1_k127_11838634_5 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000007793 216.0
BYD1_k127_11838634_6 TIGRFAM TIGR00645 family protein - - - 0.000000000000000000000000000000000000000000000000000000001008 205.0
BYD1_k127_11838634_7 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000001542 191.0
BYD1_k127_11838634_8 PRC-barrel domain - - - 0.00000000000000000000000000000000000000002952 156.0
BYD1_k127_11838634_9 Endoribonuclease L-PSP - - - 0.000000000000000000000000003298 123.0
BYD1_k127_11861790_0 - - - - 0.000000000000000000000000000000003941 132.0
BYD1_k127_11861790_1 - - - - 0.00000000000000000000000000001596 124.0
BYD1_k127_11861790_2 carbon utilization - - - 0.000000000000000000000000001008 122.0
BYD1_k127_11922897_0 Spermine/spermidine synthase domain - - - 1.65e-220 711.0
BYD1_k127_11922897_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 424.0
BYD1_k127_11922897_3 Amidinotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 295.0
BYD1_k127_11922897_4 - - - - 0.000000000000000000000000001323 123.0
BYD1_k127_11922897_5 Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain K08738 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005758,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 - 0.000000000000000004927 89.0
BYD1_k127_11947792_0 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000000000000000000000000000004746 238.0
BYD1_k127_11947792_1 Prolyl 4-hydroxylase alpha subunit homologues. K00472 - 1.14.11.2 0.00000000000000000000000000000000001194 139.0
BYD1_k127_11947792_2 Sigma-70, region 4 - - - 0.0000000000000000000000000000000001265 138.0
BYD1_k127_11947792_3 peptidyl-tyrosine sulfation - - - 0.0008986 51.0
BYD1_k127_11951502_0 - - - - 0.000000000000000000000000000000000000000000000000000000000004069 220.0
BYD1_k127_11951502_1 Protein of unknown function (DUF2938) - - - 0.000000000000000000000000000000000000000000000000000001091 196.0
BYD1_k127_11951502_2 transcriptional - - - 0.000000000000000000000000000000000000000000000000000006352 192.0
BYD1_k127_11951502_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 GO:0003674,GO:0003824,GO:0003987,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006473,GO:0006476,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016054,GO:0016405,GO:0016787,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018193,GO:0018205,GO:0018394,GO:0019213,GO:0019427,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033558,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034421,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0035601,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045733,GO:0046390,GO:0046395,GO:0046483,GO:0050218,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072329,GO:0072521,GO:0072522,GO:0090407,GO:0098732,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 6.2.1.1 0.0000000000001547 70.0
BYD1_k127_11991035_0 Glutamine amidotransferase domain - - - 0.0 1017.0
BYD1_k127_11991035_1 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 484.0
BYD1_k127_11991035_2 Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 466.0
BYD1_k127_11991035_3 PFAM Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 332.0
BYD1_k127_11991035_4 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 314.0
BYD1_k127_11991035_5 MobA-like NTP transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004977 282.0
BYD1_k127_11991035_6 PFAM AMP-dependent synthetase and ligase K00666 - - 0.00000000000000004234 82.0
BYD1_k127_11991035_7 acetyltransferase - - - 0.0000000000001632 70.0
BYD1_k127_11996891_0 SMART Nucleotide binding protein, PINc K07175 - - 1.399e-206 652.0
BYD1_k127_11996891_1 Catalyzes the formation of 2-oxobutanoate from L-threonine or the formation of pyruvate from serine K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 401.0
BYD1_k127_11996891_2 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - GO:0003674,GO:0003756,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005575,GO:0005623,GO:0006457,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016043,GO:0016787,GO:0016853,GO:0016860,GO:0016864,GO:0019538,GO:0022607,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043163,GO:0043165,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044464,GO:0045229,GO:0046872,GO:0051603,GO:0061024,GO:0061077,GO:0070011,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007158 287.0
BYD1_k127_11996891_3 (Lipo)protein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000201 223.0
BYD1_k127_11996891_4 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000373 193.0
BYD1_k127_11996891_5 PFAM Amino acid-binding ACT K03567 - - 0.000000000000000000000000000000000000000000000001021 183.0
BYD1_k127_11996891_6 ABC-type transport system involved in resistance to organic solvents auxiliary component K07323 - - 0.0000000000000000000000000000000000003343 146.0
BYD1_k127_11996891_7 NTP binding protein (Contains STAS domain) K07122 - - 0.0000001726 62.0
BYD1_k127_11998018_0 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 443.0
BYD1_k127_11998018_1 Putative ABC exporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 354.0
BYD1_k127_11998018_2 Ankyrin repeats (many copies) - - - 0.00000000000000000000000000000000000000000278 175.0
BYD1_k127_11998018_3 PFAM ABC transporter related K01990 - - 0.000000000000000000000002197 103.0
BYD1_k127_11998018_4 Protein of unknown function (DUF1552) - - - 0.0000000000000000134 84.0
BYD1_k127_12048178_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362,K05297 - 1.18.1.1,1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 561.0
BYD1_k127_12048178_1 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01739,K01761 - 2.5.1.48,4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 543.0
BYD1_k127_12048178_10 - - - - 0.0000000000000000000000000000000000000000000000000289 187.0
BYD1_k127_12048178_11 - - - - 0.00000000000000000000000000000000000000000573 160.0
BYD1_k127_12048178_12 - - - - 0.0000000000000000000000000000000000002862 148.0
BYD1_k127_12048178_13 Pfam:Pyridox_oxidase K01768 - 4.6.1.1 0.000000000000000000000000000000002659 130.0
BYD1_k127_12048178_15 Predicted membrane protein (DUF2231) - - - 0.0000000000000000003631 98.0
BYD1_k127_12048178_16 - - - - 0.00000000000000006043 89.0
BYD1_k127_12048178_17 Uncharacterised protein family (UPF0270) K09898 - - 0.000000000000002819 81.0
BYD1_k127_12048178_18 - - - - 0.00000001032 66.0
BYD1_k127_12048178_2 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 459.0
BYD1_k127_12048178_3 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 367.0
BYD1_k127_12048178_4 phytanoyl-CoA dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 306.0
BYD1_k127_12048178_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003146 248.0
BYD1_k127_12048178_6 phosphoserine phosphatase activity K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000223 250.0
BYD1_k127_12048178_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009923 247.0
BYD1_k127_12048178_8 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000001324 202.0
BYD1_k127_12048178_9 Belongs to the globin family - - - 0.000000000000000000000000000000000000000000000000004591 184.0
BYD1_k127_12095693_0 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 4.518e-238 754.0
BYD1_k127_12095693_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576,K22067 - - 8.782e-216 677.0
BYD1_k127_12095693_2 Binding-protein-dependent transport system inner membrane component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 443.0
BYD1_k127_12095693_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 377.0
BYD1_k127_12095693_4 NMT1-like family K15576,K22067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003661 310.0
BYD1_k127_12095693_5 response regulator K07183 - - 0.00000000000000000000000000000000000000000000000000000000000000000002654 238.0
BYD1_k127_12095693_6 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.00000000000000000000000000000000000003881 145.0
BYD1_k127_12151882_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 2.085e-287 905.0
BYD1_k127_12151882_1 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000001914 63.0
BYD1_k127_12151882_2 Participates in both transcription termination and antitermination K02600 - - 0.000007822 48.0
BYD1_k127_1215527_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 6.856e-244 762.0
BYD1_k127_1215527_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 598.0
BYD1_k127_1215527_2 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 431.0
BYD1_k127_1215527_3 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000001682 96.0
BYD1_k127_12158345_0 modulator of DNA gyrase K03592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 531.0
BYD1_k127_12158345_1 Belongs to the SAICAR synthetase family K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 434.0
BYD1_k127_12158345_10 DnaJ molecular chaperone homology domain K05801 - - 0.0000000000000000000000000000000000000000000000724 177.0
BYD1_k127_12158345_11 Class I peptide chain release factor K15034 - - 0.00000000000000000000002336 108.0
BYD1_k127_12158345_12 Belongs to the UPF0307 family K09889 - - 0.000000000000001192 80.0
BYD1_k127_12158345_2 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 393.0
BYD1_k127_12158345_3 COG1131 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 385.0
BYD1_k127_12158345_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 362.0
BYD1_k127_12158345_5 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 342.0
BYD1_k127_12158345_6 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000238 274.0
BYD1_k127_12158345_7 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000143 278.0
BYD1_k127_12158345_8 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000005609 231.0
BYD1_k127_12158345_9 Secretion ATPase, PEP-CTERM locus subfamily K02450 - - 0.0000000000000000000000000000000000000000000000000004843 189.0
BYD1_k127_12212648_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.782e-269 852.0
BYD1_k127_12212648_1 PFAM Type II secretion system protein E - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 524.0
BYD1_k127_12212648_2 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 469.0
BYD1_k127_12212648_3 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 354.0
BYD1_k127_12212648_4 PFAM biotin lipoyl attachment domain-containing protein K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 349.0
BYD1_k127_12212648_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 321.0
BYD1_k127_12212648_6 ATPase activity K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000001084 241.0
BYD1_k127_12212648_7 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000007316 176.0
BYD1_k127_12212648_8 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.000000000000000000000000000001259 137.0
BYD1_k127_12212648_9 Protein of unknown function (DUF2905) - - - 0.000000000000000000003896 101.0
BYD1_k127_1252197_0 TonB dependent receptor K02014 - - 0.0 1105.0
BYD1_k127_1252197_1 Luciferase-like monooxygenase - - - 8.419e-211 662.0
BYD1_k127_1252197_10 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006188 280.0
BYD1_k127_1252197_11 nitrite transmembrane transporter activity K08177 - - 0.000000000000000000000000000000000000000000000000000000000000000000169 246.0
BYD1_k127_1252197_14 PFAM flavin reductase domain protein, FMN-binding K16048 - - 0.0000000000000000008273 94.0
BYD1_k127_1252197_15 NUDIX domain K01515,K03574 - 3.6.1.13,3.6.1.55 0.00000000000009461 80.0
BYD1_k127_1252197_16 TonB dependent receptor - - - 0.0000000000006774 73.0
BYD1_k127_1252197_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000282 575.0
BYD1_k127_1252197_3 of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 572.0
BYD1_k127_1252197_4 of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 490.0
BYD1_k127_1252197_6 Taurine catabolism dioxygenase TauD, TfdA family K03119,K06912 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 414.0
BYD1_k127_1252197_7 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 401.0
BYD1_k127_1252197_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 384.0
BYD1_k127_1252197_9 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 371.0
BYD1_k127_1271566_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000002189 209.0
BYD1_k127_1277624_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 8.508e-316 996.0
BYD1_k127_1277624_1 Transcriptional regulator K04761 - - 0.00000000000232 67.0
BYD1_k127_1277624_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000003417 59.0
BYD1_k127_1286293_0 Protein of unknown function (DUF1549) - - - 9e-323 1023.0
BYD1_k127_1286293_1 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 364.0
BYD1_k127_1289153_0 N-acetylphosphatidylethanolamine-hydrolysing phospholipas activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005649 276.0
BYD1_k127_1289153_1 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000001398 244.0
BYD1_k127_1291679_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 2.904e-263 823.0
BYD1_k127_1291679_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007586 554.0
BYD1_k127_1291679_2 acetyltransferase K22441 GO:0003674,GO:0003824,GO:0004145,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0043937,GO:0043939,GO:0044424,GO:0044464,GO:0048519,GO:0050789,GO:0050793,GO:0051093,GO:0065007 2.3.1.57 0.0000000000000000000000000000000000000000000000003533 181.0
BYD1_k127_1291679_3 Protein of unknown function (DUF3465) - - - 0.00000000000000000000000000000000005654 138.0
BYD1_k127_1291679_4 Receptor - - - 0.0007044 46.0
BYD1_k127_1346931_0 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 1.253e-220 692.0
BYD1_k127_1346931_1 Belongs to the Orn Lys Arg decarboxylase class-II family. NspC subfamily K13747 - 4.1.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 596.0
BYD1_k127_1346931_2 cephalosporin-C deacetylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000001501 233.0
BYD1_k127_1346931_3 Glycosyl hydrolases family 43 K06113 - 3.2.1.99 0.00000000000000000000000000000000000000000001077 168.0
BYD1_k127_1388166_0 Domain of unknown function (DUF3333) K02038 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 548.0
BYD1_k127_1388166_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 437.0
BYD1_k127_1388166_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005707 254.0
BYD1_k127_1388166_3 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000009795 210.0
BYD1_k127_1388740_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.688e-212 674.0
BYD1_k127_1388740_1 Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the stringent response , an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities K01524 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006082,GO:0006139,GO:0006725,GO:0006793,GO:0006797,GO:0006798,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008894,GO:0009056,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0015949,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034641,GO:0042594,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:1901360,GO:1901575 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006693 443.0
BYD1_k127_1388740_2 peroxiredoxin, OsmC subfamily K04063 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006970,GO:0006972,GO:0006979,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1990748 - 0.00000000000000000000000000000000000000000000000000000954 192.0
BYD1_k127_1388740_3 Iron--sulfur cluster insertion protein erpA K15724 - - 0.0000000000000000000000000000000000000000000000007903 176.0
BYD1_k127_1388740_4 cell shape determination - - - 0.000000000926 60.0
BYD1_k127_1399758_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1135.0
BYD1_k127_1399758_1 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 554.0
BYD1_k127_1399758_2 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 301.0
BYD1_k127_1399758_3 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000001151 224.0
BYD1_k127_1399758_4 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000001436 207.0
BYD1_k127_1399758_5 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000002358 140.0
BYD1_k127_1399758_6 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000002099 103.0
BYD1_k127_1399758_7 Unextendable partial coding region - - - 0.000000000000000003588 85.0
BYD1_k127_1399758_8 COG NOG14600 non supervised orthologous group - - - 0.0000000000000001206 79.0
BYD1_k127_1399758_9 - - - - 0.0000001287 57.0
BYD1_k127_1417342_0 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 332.0
BYD1_k127_1417342_1 DNA topological change - - - 0.0000000000000000000000000000000000000000000000000000000000000003283 227.0
BYD1_k127_1417342_2 Ankyrin repeats (3 copies) - - - 0.000000000000000000002032 106.0
BYD1_k127_1477857_0 Prolyl oligopeptidase K01322 - 3.4.21.26 2.273e-269 833.0
BYD1_k127_1477857_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.279e-223 705.0
BYD1_k127_1477857_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 405.0
BYD1_k127_1477857_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 389.0
BYD1_k127_1477857_5 Predicted membrane protein (DUF2157) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 346.0
BYD1_k127_1477857_6 s cog2930 - - - 0.000000000000000000000000000000000000000000000000000000001846 206.0
BYD1_k127_1477857_7 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000003021 180.0
BYD1_k127_1477857_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000009154 162.0
BYD1_k127_1477857_9 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000145 137.0
BYD1_k127_1491215_0 COG0845 Membrane-fusion protein K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 597.0
BYD1_k127_1491215_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 498.0
BYD1_k127_1491215_2 outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 471.0
BYD1_k127_1491215_3 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000078 417.0
BYD1_k127_1491215_4 COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase K01082 GO:0000103,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006790,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008441,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002025 278.0
BYD1_k127_1491215_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0000000000000000000000000000000000000000000000000000000000000000004286 233.0
BYD1_k127_149572_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 499.0
BYD1_k127_149572_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000007663 148.0
BYD1_k127_149572_2 pilus assembly protein FimV K08086 - - 0.0000000000000000000000000000849 122.0
BYD1_k127_1548229_0 amino acid K03758 - - 7.303e-217 681.0
BYD1_k127_1548229_1 TonB dependent receptor - - - 1.765e-211 677.0
BYD1_k127_1548229_10 guanyl-nucleotide exchange factor activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 306.0
BYD1_k127_1548229_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000007485 269.0
BYD1_k127_1548229_12 catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000001375 282.0
BYD1_k127_1548229_13 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000158 241.0
BYD1_k127_1548229_14 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000006536 194.0
BYD1_k127_1548229_15 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins K03790 - 2.3.1.128 0.0000000000000000000000000000000000000000000000001841 182.0
BYD1_k127_1548229_16 UPF0056 membrane protein K05595 - - 0.00000000000000000000000000000000000000000000001167 179.0
BYD1_k127_1548229_17 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000001897 156.0
BYD1_k127_1548229_18 Small Multidrug Resistance protein K11741 - - 0.00000000000000000000000000000000000007595 146.0
BYD1_k127_1548229_19 - - - - 0.00000000000000000000000000000003282 140.0
BYD1_k127_1548229_2 Major facilitator superfamily K08218 - - 1.008e-195 619.0
BYD1_k127_1548229_21 - - - - 0.000000000000000000000000003378 113.0
BYD1_k127_1548229_22 PFAM Membrane protein of K08972 - - 0.000000000000000000000000008302 113.0
BYD1_k127_1548229_23 TRANSCRIPTIONal - - - 0.00000000000000000000000001813 111.0
BYD1_k127_1548229_24 - - - - 0.00000000000000000000000007187 112.0
BYD1_k127_1548229_25 ferredoxin - - - 0.000000000000000000006437 97.0
BYD1_k127_1548229_26 Domain of unknown function (DUF4124) - - - 0.0000000000000000008825 94.0
BYD1_k127_1548229_27 Bacterial protein of unknown function (DUF883) - - - 0.0000009634 57.0
BYD1_k127_1548229_28 - - - - 0.000001723 55.0
BYD1_k127_1548229_3 ABC transporter K15738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 615.0
BYD1_k127_1548229_4 Arginine deiminase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007081 594.0
BYD1_k127_1548229_5 Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 521.0
BYD1_k127_1548229_6 Tannase and feruloyl esterase K21105 - 3.1.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 514.0
BYD1_k127_1548229_7 Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 519.0
BYD1_k127_1548229_8 Porin subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 333.0
BYD1_k127_1548229_9 Glucose sorbosone K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 321.0
BYD1_k127_1558061_0 PFAM lipopolysaccharide biosynthesis - - - 0.00000000000000000000000000000000000000000000000000004459 208.0
BYD1_k127_1558061_1 AAA domain - - - 0.000000000000000000000000000000000000000000003694 173.0
BYD1_k127_1558061_2 Belongs to the glycosyltransferase 26 family K05946 - 2.4.1.187 0.0004119 48.0
BYD1_k127_1570676_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family - - - 0.0 1234.0
BYD1_k127_1570676_1 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009702 567.0
BYD1_k127_1570676_2 PFAM Major Facilitator Superfamily K02575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 534.0
BYD1_k127_1570676_3 Serine/threonine phosphatases, family 2C, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 376.0
BYD1_k127_1570676_4 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 318.0
BYD1_k127_1571709_0 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA K06445 - - 2.259e-284 902.0
BYD1_k127_1571709_1 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 1.761e-195 618.0
BYD1_k127_1571709_10 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 293.0
BYD1_k127_1571709_11 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001365 272.0
BYD1_k127_1571709_12 serine threonine protein kinase K11912 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000004251 229.0
BYD1_k127_1571709_13 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000001827 218.0
BYD1_k127_1571709_14 Wd-40 repeat - - - 0.00000000000000000000000000000000000000000000000000000003551 211.0
BYD1_k127_1571709_15 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000001224 196.0
BYD1_k127_1571709_16 Domain of unknown function (DUF4399) - - - 0.00000000000000000000000000000000000000002808 158.0
BYD1_k127_1571709_17 Sulfatase - - - 0.0000000000000000000000000000000000000004413 168.0
BYD1_k127_1571709_18 Protein of unknown function (DUF861) K06995 - - 0.0000000000000000000000000000000001146 143.0
BYD1_k127_1571709_19 arylsulfatase activity K01130 - 3.1.6.1 0.00000000000000000006941 95.0
BYD1_k127_1571709_2 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 601.0
BYD1_k127_1571709_20 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000002323 77.0
BYD1_k127_1571709_21 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000298 69.0
BYD1_k127_1571709_22 Type II secretion system protein B K02451 - - 0.00000003655 62.0
BYD1_k127_1571709_3 Belongs to the UPF0061 (SELO) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 570.0
BYD1_k127_1571709_4 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 477.0
BYD1_k127_1571709_5 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 416.0
BYD1_k127_1571709_6 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 408.0
BYD1_k127_1571709_7 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 383.0
BYD1_k127_1571709_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 343.0
BYD1_k127_1571709_9 COG0438 Glycosyltransferase K14335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 344.0
BYD1_k127_1597359_0 DEAD DEAH box helicase K03724 - - 0.0 1701.0
BYD1_k127_1597359_1 Belongs to the heme-copper respiratory oxidase family - - - 0.0 1168.0
BYD1_k127_1597359_10 Domain present in phytochromes and cGMP-specific phosphodiesterases. K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 352.0
BYD1_k127_1597359_11 Saccharopine dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 325.0
BYD1_k127_1597359_12 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 314.0
BYD1_k127_1597359_13 PFAM flavin reductase domain protein FMN-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 296.0
BYD1_k127_1597359_14 50S ribosomal protein L21 K09958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 298.0
BYD1_k127_1597359_15 NmrA-like family K19267 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000602 289.0
BYD1_k127_1597359_16 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006328 295.0
BYD1_k127_1597359_17 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003964 269.0
BYD1_k127_1597359_18 cytochrome o ubiquinol oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003013 286.0
BYD1_k127_1597359_19 May be involved in recombination K03554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003615 274.0
BYD1_k127_1597359_2 Likely ribonuclease with RNase H fold. K06959 - - 0.0 1044.0
BYD1_k127_1597359_20 Protein of unknown function, DUF488 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004008 268.0
BYD1_k127_1597359_21 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002512 263.0
BYD1_k127_1597359_22 SURF1 family K14998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002444 259.0
BYD1_k127_1597359_23 Domain of unknown function (DUF4159) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000208 244.0
BYD1_k127_1597359_24 Bacterial regulatory protein, arsR family - - - 0.0000000000000000000000000000000000000000000000000000000000001776 218.0
BYD1_k127_1597359_25 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000001031 212.0
BYD1_k127_1597359_26 YCII-related domain - - - 0.00000000000000000000000000000000000000000000000000000004676 199.0
BYD1_k127_1597359_27 2OG-Fe(II) oxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000023 200.0
BYD1_k127_1597359_28 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000009829 192.0
BYD1_k127_1597359_29 - - - - 0.00000000000000000000000000000000000000000001003 181.0
BYD1_k127_1597359_3 Rhodanese Homology Domain - - - 7.181e-229 723.0
BYD1_k127_1597359_30 integral membrane protein - - - 0.0000000000000000000000000000000001095 136.0
BYD1_k127_1597359_31 cytochrome o ubiquinol oxidase K02300 - - 0.00000000000000000000000000000008998 138.0
BYD1_k127_1597359_32 Domain of unknown function (DUF4166) - - - 0.000000000000000000000000002045 119.0
BYD1_k127_1597359_33 Belongs to the HSP15 family K04762 - - 0.000000000000000000000000003608 115.0
BYD1_k127_1597359_34 Cro/C1-type HTH DNA-binding domain K07729 - - 0.00000000000000000000000963 108.0
BYD1_k127_1597359_35 WD40 domain protein beta Propeller K12132 - 2.7.11.1 0.0000000000000000000004199 107.0
BYD1_k127_1597359_36 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000000004582 96.0
BYD1_k127_1597359_37 Pyridoxamine 5'-phosphate oxidase K07006 - - 0.000000000000000000399 93.0
BYD1_k127_1597359_38 KTSC domain - - - 0.000000000000006484 77.0
BYD1_k127_1597359_39 - - - - 0.000000001133 64.0
BYD1_k127_1597359_4 Arabinose ABC transporter permease - - - 2.755e-212 666.0
BYD1_k127_1597359_40 Uracil DNA glycosylase superfamily - - - 0.00002252 55.0
BYD1_k127_1597359_5 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 620.0
BYD1_k127_1597359_6 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000443 525.0
BYD1_k127_1597359_7 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 476.0
BYD1_k127_1597359_8 ubiquinol oxidase subunit K02297 - 1.10.3.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 402.0
BYD1_k127_1597359_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 359.0
BYD1_k127_1655704_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.436e-295 916.0
BYD1_k127_1655704_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.45e-264 824.0
BYD1_k127_1655704_10 Trypsin-like peptidase domain - - - 0.00000000000002162 78.0
BYD1_k127_1655704_11 Protein of unknown function (DUF1674) - - - 0.00000000009533 64.0
BYD1_k127_1655704_12 Flavinator of succinate dehydrogenase K09159 - - 0.000000001975 69.0
BYD1_k127_1655704_13 Glutaredoxin-like domain (DUF836) - - - 0.000000003026 61.0
BYD1_k127_1655704_14 PFAM Anti sigma-E protein RseA K03597 - - 0.000001371 58.0
BYD1_k127_1655704_2 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008332 424.0
BYD1_k127_1655704_3 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 326.0
BYD1_k127_1655704_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003765 253.0
BYD1_k127_1655704_5 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000001792 145.0
BYD1_k127_1655704_6 MucB/RseB C-terminal domain - - - 0.00000000000000000000000000000002822 138.0
BYD1_k127_1655704_7 succinate dehydrogenase K00242 - - 0.000000000000000000000002975 112.0
BYD1_k127_1655704_8 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000000003345 106.0
BYD1_k127_1655704_9 Forkhead associated domain - - - 0.0000000000000000000001107 110.0
BYD1_k127_1674687_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 464.0
BYD1_k127_1674687_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 458.0
BYD1_k127_1674687_2 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003172 255.0
BYD1_k127_1674687_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion K03585 - - 0.000000000000000000000000000000000000000007163 163.0
BYD1_k127_1674687_4 Late embryogenesis abundant protein - - - 0.000000000000008603 80.0
BYD1_k127_1674687_5 Beta-lactamase - - - 0.00000000000001016 85.0
BYD1_k127_1766533_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 377.0
BYD1_k127_1766533_1 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001721 349.0
BYD1_k127_1766533_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000004586 69.0
BYD1_k127_1779328_0 Fis family transcriptional regulator K10941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 412.0
BYD1_k127_1779328_1 Sigma-54 interaction domain K10943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 369.0
BYD1_k127_1779328_2 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 298.0
BYD1_k127_1779328_3 Flagellar protein FliS K02422 GO:0001539,GO:0003674,GO:0005198,GO:0006928,GO:0008150,GO:0009987,GO:0040011,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 - 0.0000000000000000000000000000002217 127.0
BYD1_k127_1779328_4 Atypical PilZ domain, cyclic di-GMP receptor - - - 0.00000000000000000000264 106.0
BYD1_k127_1779328_5 PFAM Flagellar protein FlaG protein K06603 - - 0.0000003269 53.0
BYD1_k127_179470_0 TonB dependent receptor K02014 - - 9.345e-211 678.0
BYD1_k127_179470_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000003226 191.0
BYD1_k127_1813597_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 6.562e-281 893.0
BYD1_k127_1813597_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000003176 85.0
BYD1_k127_1826176_0 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004529 423.0
BYD1_k127_1826176_1 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000005868 236.0
BYD1_k127_1826176_2 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000002089 198.0
BYD1_k127_1826176_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000006974 136.0
BYD1_k127_1826176_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000009491 95.0
BYD1_k127_1844053_0 FAD linked oxidase domain protein K05797 - 1.17.99.1 0.00000000000000000000000000000000000000000000000000000000000169 218.0
BYD1_k127_1844053_1 FAD linked oxidase domain protein K05797 - 1.17.99.1 0.00000000000000000000000000000000000009164 147.0
BYD1_k127_1844053_2 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000004196 99.0
BYD1_k127_1896933_0 Concanavalin A-like lectin/glucanases superfamily - - - 8.394e-253 808.0
BYD1_k127_1896933_1 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 1.364e-220 715.0
BYD1_k127_1896933_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007927 460.0
BYD1_k127_1896933_3 COG3103 SH3 domain protein - - - 0.00000000000000000000000000000000000000000000000000006261 196.0
BYD1_k127_1896933_4 - - - - 0.0000000000000000000000000000000001585 137.0
BYD1_k127_1896933_5 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00001088 51.0
BYD1_k127_191755_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 6.476e-279 892.0
BYD1_k127_191755_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 609.0
BYD1_k127_191755_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005791 286.0
BYD1_k127_191755_11 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001482 282.0
BYD1_k127_191755_12 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000001434 251.0
BYD1_k127_191755_13 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000001185 240.0
BYD1_k127_191755_14 Belongs to the HpcH HpaI aldolase family K01630,K02510 - 4.1.2.20,4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000002259 226.0
BYD1_k127_191755_15 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000005314 199.0
BYD1_k127_191755_16 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000004802 195.0
BYD1_k127_191755_17 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000005252 161.0
BYD1_k127_191755_18 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000003824 164.0
BYD1_k127_191755_19 Belongs to the skp family K06142 - - 0.000000000000000002031 94.0
BYD1_k127_191755_2 Aminotransferase, class I K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 498.0
BYD1_k127_191755_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 441.0
BYD1_k127_191755_4 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008861 413.0
BYD1_k127_191755_5 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 399.0
BYD1_k127_191755_6 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 336.0
BYD1_k127_191755_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003547 325.0
BYD1_k127_191755_8 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 295.0
BYD1_k127_191755_9 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 289.0
BYD1_k127_1944447_0 Flagellar protein export ATPase FliI K02412 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 570.0
BYD1_k127_1944447_1 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 430.0
BYD1_k127_1944447_10 Flagellar FliJ protein K02413 - - 0.0000000000009921 78.0
BYD1_k127_1944447_11 Sigma-54 interaction domain K10943 - - 0.00000000002376 66.0
BYD1_k127_1944447_12 flagellar biosynthesis protein K02418 - - 0.00001182 53.0
BYD1_k127_1944447_2 Plays a role in the flagellum-specific transport system K02419 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007521 293.0
BYD1_k127_1944447_3 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000000000000000003865 160.0
BYD1_k127_1944447_4 Role in flagellar biosynthesis K02420 - - 0.0000000000000000000000000000002002 124.0
BYD1_k127_1944447_5 Role in flagellar biosynthesis K02421 - - 0.0000000000000000000000000000005474 126.0
BYD1_k127_1944447_6 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.0000000000000000000000000000008387 129.0
BYD1_k127_1944447_7 Flagellar basal body-associated protein FliL - - - 0.0000000000000000000000002215 113.0
BYD1_k127_1944447_8 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000000662 108.0
BYD1_k127_1944447_9 Flagellar hook-length control protein K02414 GO:0001539,GO:0005575,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0097588 - 0.00000000000000002289 94.0
BYD1_k127_1963431_0 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008469 454.0
BYD1_k127_1963431_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 368.0
BYD1_k127_1963431_2 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000001532 239.0
BYD1_k127_1963431_3 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000009466 187.0
BYD1_k127_1973059_0 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000000000000001596 231.0
BYD1_k127_1985835_0 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 584.0
BYD1_k127_1985835_1 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 361.0
BYD1_k127_1985835_2 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000000000003077 221.0
BYD1_k127_1992956_0 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 533.0
BYD1_k127_2013148_0 PFAM outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007577 474.0
BYD1_k127_2013148_1 TIGRFAM efflux transporter, RND family, MFP subunit K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 364.0
BYD1_k127_2065853_0 Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001256 277.0
BYD1_k127_2065853_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000000004519 183.0
BYD1_k127_2065853_2 Histidine kinase - - - 0.00000000000000000000000000001666 136.0
BYD1_k127_2065853_3 DNA-binding transcription factor activity - - - 0.0000000000000000000000000000715 127.0
BYD1_k127_2091556_0 Belongs to the DEAD box helicase family K03732,K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 560.0
BYD1_k127_210968_0 TonB dependent receptor - - - 3.019e-239 760.0
BYD1_k127_210968_1 FAD binding domain K09828 - 1.3.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003578 543.0
BYD1_k127_210968_10 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 323.0
BYD1_k127_210968_11 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002256 305.0
BYD1_k127_210968_12 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001094 291.0
BYD1_k127_210968_13 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009024 288.0
BYD1_k127_210968_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006555 267.0
BYD1_k127_210968_15 efflux pump K03296,K18138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005785 249.0
BYD1_k127_210968_16 Dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001492 238.0
BYD1_k127_210968_17 pathogenesis - - - 0.000000000000000000000000000000000000000000000000001858 190.0
BYD1_k127_210968_18 - - - - 0.00000000000000000000000000000000000000000005722 166.0
BYD1_k127_210968_2 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006408 522.0
BYD1_k127_210968_20 transcriptional - - - 0.0000000000000000000000000000000004346 136.0
BYD1_k127_210968_21 Alpha beta - - - 0.0000000000000000000000000002251 125.0
BYD1_k127_210968_22 - - - - 0.00000000000000000000000001339 119.0
BYD1_k127_210968_3 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008457 503.0
BYD1_k127_210968_4 E COG0620 Methionine synthase II (cobalamin-independent) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 474.0
BYD1_k127_210968_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 404.0
BYD1_k127_210968_7 ADA regulatory protein K00567,K10778 GO:0001130,GO:0003674,GO:0003700,GO:0003824,GO:0003908,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006355,GO:0006464,GO:0006479,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016740,GO:0016741,GO:0018125,GO:0018193,GO:0018198,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044728,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046872,GO:0046914,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0070988,GO:0071704,GO:0080090,GO:0080111,GO:0090304,GO:0140110,GO:1901360,GO:1901564,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 346.0
BYD1_k127_210968_8 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 333.0
BYD1_k127_210968_9 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 322.0
BYD1_k127_2117198_0 Protein of unknown function (DUF1595) - - - 8.122e-272 846.0
BYD1_k127_2117198_1 TonB dependent receptor - - - 8.477e-272 867.0
BYD1_k127_2117198_10 SnoaL-like domain - - - 0.00000000000000000000000000000000000009346 151.0
BYD1_k127_2117198_2 protein conserved in bacteria - - - 6.742e-250 779.0
BYD1_k127_2117198_3 Protein of unknown function (DUF1552) - - - 3.059e-242 754.0
BYD1_k127_2117198_4 cytochrome C K19713,K22474 - 1.1.5.5,1.8.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 610.0
BYD1_k127_2117198_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 589.0
BYD1_k127_2117198_6 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 423.0
BYD1_k127_2117198_7 Xylose isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004118 378.0
BYD1_k127_2117198_8 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001994 267.0
BYD1_k127_2117198_9 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000009705 193.0
BYD1_k127_2145788_0 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 528.0
BYD1_k127_2145788_1 PFAM intradiol ring-cleavage dioxygenase K03381,K04098,K15253 - 1.13.11.1,1.13.11.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004045 367.0
BYD1_k127_2145788_2 Histidine kinase K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 355.0
BYD1_k127_2145788_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 347.0
BYD1_k127_2145788_4 response regulator K07664 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 294.0
BYD1_k127_2145788_5 Putative esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 300.0
BYD1_k127_2145788_6 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000009985 229.0
BYD1_k127_2145788_7 Protein of unknown function (DUF1587) - - - 0.00000000000000003358 89.0
BYD1_k127_2152572_0 Subunit A of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05559 - - 0.0 1208.0
BYD1_k127_2152572_1 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007668 614.0
BYD1_k127_2152572_10 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000003018 161.0
BYD1_k127_2152572_11 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000007728 149.0
BYD1_k127_2152572_12 Monovalent cation proton antiporter subunit MnhG PhaG K05564 - - 0.00000000000000000000000000000002917 133.0
BYD1_k127_2152572_13 Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05563 - - 0.000000000000000000000000002199 123.0
BYD1_k127_2152572_14 TonB C terminal K03646 - - 0.00000000000000001258 86.0
BYD1_k127_2152572_2 Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 525.0
BYD1_k127_2152572_3 belongs to the aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 461.0
BYD1_k127_2152572_4 Involved in the TonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 371.0
BYD1_k127_2152572_5 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 335.0
BYD1_k127_2152572_6 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 333.0
BYD1_k127_2152572_7 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000004753 233.0
BYD1_k127_2152572_8 Na+/H+ ion antiporter subunit K05562 - - 0.00000000000000000000000000000000000000000000000756 177.0
BYD1_k127_2152572_9 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K05560 - - 0.00000000000000000000000000000000000000000000002783 180.0
BYD1_k127_2156047_0 Peptidase, M16 - - - 0.0 1165.0
BYD1_k127_2156047_1 3-hydroxyacyl-coa dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 9.854e-211 674.0
BYD1_k127_2156047_10 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000007723 207.0
BYD1_k127_2156047_11 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000008848 206.0
BYD1_k127_2156047_12 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000004677 180.0
BYD1_k127_2156047_13 Pilus assembly protein PilZ K02676 - - 0.000000000000000000000000000000000000000000000000619 177.0
BYD1_k127_2156047_14 DNA polymerase III, delta' K02341 - 2.7.7.7 0.00000000000000000000000000000000000000002967 166.0
BYD1_k127_2156047_15 Amino-transferase class IV K02619 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008696,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042558,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 4.1.3.38 0.0000000000000000000000000000000000000001529 165.0
BYD1_k127_2156047_16 Type II secretion system (T2SS), protein J - - - 0.000000000000000000000000000000002292 137.0
BYD1_k127_2156047_17 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000007233 119.0
BYD1_k127_2156047_18 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000001618 115.0
BYD1_k127_2156047_19 COG3156 Type II secretory pathway component PulK K02460 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.000000000000000000000000003944 125.0
BYD1_k127_2156047_2 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 1.392e-194 647.0
BYD1_k127_2156047_20 Rhomboid family - - - 0.00000000000000000000000006495 121.0
BYD1_k127_2156047_21 GspL periplasmic domain - - - 0.000000000000000000000001275 119.0
BYD1_k127_2156047_22 Type II secretion system (T2SS), protein I K02458 - - 0.000000000000002193 84.0
BYD1_k127_2156047_23 MTH538 TIR-like domain (DUF1863) - - - 0.0000000000003067 76.0
BYD1_k127_2156047_24 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000000000007734 75.0
BYD1_k127_2156047_25 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000002293 71.0
BYD1_k127_2156047_26 - - - - 0.000000001246 66.0
BYD1_k127_2156047_27 Type II transport protein GspH K02457 - - 0.0000006119 60.0
BYD1_k127_2156047_28 Type II secretion system (T2SS), protein N K02463 - - 0.0001232 53.0
BYD1_k127_2156047_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033817,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 534.0
BYD1_k127_2156047_4 Anthranilate synthase component I K01657,K01665 - 2.6.1.85,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 417.0
BYD1_k127_2156047_5 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 352.0
BYD1_k127_2156047_6 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 342.0
BYD1_k127_2156047_7 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101 310.0
BYD1_k127_2156047_8 Psort location Cytoplasmic, score 9.26 K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 301.0
BYD1_k127_2156047_9 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004586 265.0
BYD1_k127_2162743_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 1.286e-195 618.0
BYD1_k127_2162743_1 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 580.0
BYD1_k127_2162743_2 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 328.0
BYD1_k127_2162743_3 MFS transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 313.0
BYD1_k127_2162743_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001816 258.0
BYD1_k127_2162743_5 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000001366 252.0
BYD1_k127_2162743_6 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000000002834 207.0
BYD1_k127_2162743_7 Sterol-binding protein K03690 - - 0.0000000000000000009074 94.0
BYD1_k127_2162743_8 Polysaccharide biosynthesis protein - - - 0.000002754 60.0
BYD1_k127_2162743_9 Pyridoxal-phosphate dependent enzyme K01696 GO:0000162,GO:0003674,GO:0003824,GO:0004834,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 0.00005441 46.0
BYD1_k127_217359_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 495.0
BYD1_k127_217359_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 512.0
BYD1_k127_217359_2 DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 496.0
BYD1_k127_217359_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000001927 155.0
BYD1_k127_2177834_0 ribosomal rna small subunit methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 466.0
BYD1_k127_2177834_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 312.0
BYD1_k127_2177834_2 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000006636 226.0
BYD1_k127_2177834_3 - - - - 0.000000000000000000000001253 109.0
BYD1_k127_2177834_4 - - - - 0.00000000000000001027 96.0
BYD1_k127_2190719_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147,K06148,K18889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 625.0
BYD1_k127_2190719_1 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008843 331.0
BYD1_k127_2190719_2 Diacylglycerol kinase catalytic domain - - - 0.0000000000000000000000000000000000000000000000004985 187.0
BYD1_k127_2190719_3 Kdo2-lipid A biosynthetic process K02517,K20543,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.00000000000000000000000001196 113.0
BYD1_k127_2231641_0 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 331.0
BYD1_k127_2231641_1 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 302.0
BYD1_k127_2236508_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 6.272e-245 771.0
BYD1_k127_2236508_1 Cytosol aminopeptidase family, catalytic domain K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 447.0
BYD1_k127_2236508_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002343 419.0
BYD1_k127_2236508_3 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005317 244.0
BYD1_k127_2236508_4 - - - - 0.00000000000000000000000000000000000000000004064 177.0
BYD1_k127_2236508_5 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000001137 123.0
BYD1_k127_2236508_6 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000001801 123.0
BYD1_k127_2236508_7 Tetratricopeptide repeat - - - 0.000000000000000002571 95.0
BYD1_k127_2236508_8 TIGRFAM TonB family protein K03832 - - 0.0000000000001394 79.0
BYD1_k127_2262087_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 496.0
BYD1_k127_2262087_1 PFAM type II secretion system K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 428.0
BYD1_k127_2262087_2 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000000000001367 224.0
BYD1_k127_2289286_0 - - - - 0.0000000000000000000000000000000000000002898 150.0
BYD1_k127_2289286_1 - - - - 0.00000000000000000000000000000000009846 140.0
BYD1_k127_2309527_0 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 601.0
BYD1_k127_2309527_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000001815 137.0
BYD1_k127_2309527_2 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000001674 125.0
BYD1_k127_2366222_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 4.84e-252 790.0
BYD1_k127_2366222_1 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003722 430.0
BYD1_k127_2366222_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 350.0
BYD1_k127_2366222_3 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 318.0
BYD1_k127_2366222_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008031 275.0
BYD1_k127_2366222_5 Putative peptidoglycan binding domain - - - 0.0000000000000000000000000000000000000000004953 169.0
BYD1_k127_2366262_0 SURF1-like protein - - - 0.0000000000000000000000000000000000005442 148.0
BYD1_k127_2366262_1 cytochrome K02259 - - 0.00000000000000000000000000002065 120.0
BYD1_k127_2366262_2 signal sequence binding - - - 0.0000000000000000000000005853 111.0
BYD1_k127_2366262_3 Protein of unknown function (DUF2909) - - - 0.00000005045 60.0
BYD1_k127_2368135_0 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 9.101e-308 951.0
BYD1_k127_2368135_1 Conserved carboxylase domain K01571 - 4.1.1.3 1.595e-225 713.0
BYD1_k127_2368135_10 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 293.0
BYD1_k127_2368135_11 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008071 260.0
BYD1_k127_2368135_12 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000008293 240.0
BYD1_k127_2368135_13 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000001919 227.0
BYD1_k127_2368135_14 Bacterial protein of unknown function (DUF937) - - - 0.000000000000000000000000000000000000000000000000000000001528 207.0
BYD1_k127_2368135_15 Bacterial transcriptional repressor C-terminal - - - 0.00000000000000000000000000000000000000000000004265 180.0
BYD1_k127_2368135_16 YCII-related domain - - - 0.00000000000000000000000000000000000000000000113 171.0
BYD1_k127_2368135_17 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000002342 174.0
BYD1_k127_2368135_18 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K01826 - 5.3.3.10 0.00000000000000000000000000000000000000000001153 169.0
BYD1_k127_2368135_19 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000003343 157.0
BYD1_k127_2368135_2 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 1.634e-196 621.0
BYD1_k127_2368135_20 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000000000000002413 170.0
BYD1_k127_2368135_21 Protein of unknown function, DUF481 - - - 0.00000000000000000000000000000000000001767 158.0
BYD1_k127_2368135_22 - - - - 0.0000000000000000000000000000000009349 136.0
BYD1_k127_2368135_23 - - - - 0.00000000000000000000000000003108 123.0
BYD1_k127_2368135_24 - - - - 0.000000000000000000001247 105.0
BYD1_k127_2368135_25 - - - - 0.0000000000004374 74.0
BYD1_k127_2368135_3 Ferritin-like K20087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008027 528.0
BYD1_k127_2368135_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 470.0
BYD1_k127_2368135_5 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 450.0
BYD1_k127_2368135_6 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 364.0
BYD1_k127_2368135_7 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 367.0
BYD1_k127_2368135_8 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006696 343.0
BYD1_k127_2368135_9 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 326.0
BYD1_k127_2388426_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 473.0
BYD1_k127_2388426_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 337.0
BYD1_k127_2388426_2 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 GO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001661 271.0
BYD1_k127_2398064_0 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000003461 173.0
BYD1_k127_2398064_1 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.0000000000000000000000000000000000000005371 156.0
BYD1_k127_2398064_2 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.000000000000000000000000000000000003699 143.0
BYD1_k127_2398064_3 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000003493 122.0
BYD1_k127_2398064_4 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000000001177 125.0
BYD1_k127_2398064_5 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 - - 0.0000006137 57.0
BYD1_k127_2432774_0 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005026 271.0
BYD1_k127_2432774_1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 - - 0.000000000000000000000000000000000000000000000000000000000000000005104 229.0
BYD1_k127_2432774_2 PFAM AsmA family protein K07289 - - 0.0000000000000000000000000000000000000000000000000000000743 213.0
BYD1_k127_2432774_3 TIGRFAM phage conjugal plasmid C-4 type zinc finger protein, TraR family - - - 0.0000000000000000000000000000000000003538 141.0
BYD1_k127_2441706_0 Angiotensin-converting enzyme K01283 - 3.4.15.1 5.606e-240 756.0
BYD1_k127_2441706_1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 297.0
BYD1_k127_2441706_2 Histidine kinase - - - 0.00000000000000000000000004455 119.0
BYD1_k127_2441706_3 - - - - 0.0000000000000002196 87.0
BYD1_k127_2441706_4 Putative peptidoglycan binding domain - - - 0.000000000000001363 86.0
BYD1_k127_2448880_0 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 398.0
BYD1_k127_2448880_1 PFAM Cytochrome P450 K14338 - 1.14.14.1,1.6.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 365.0
BYD1_k127_2448880_2 Domain of unknown function (DUF374) K09778 - - 0.0000000000000000000000000000000000000000000000003133 187.0
BYD1_k127_2458081_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004999 344.0
BYD1_k127_2458081_1 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 344.0
BYD1_k127_2458081_2 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 334.0
BYD1_k127_2458081_3 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001549 276.0
BYD1_k127_2458081_4 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.0000000000000000000000000000000000000000000000000004303 199.0
BYD1_k127_2458081_5 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000004617 164.0
BYD1_k127_2458081_6 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.00000001803 58.0
BYD1_k127_2463772_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.0 1084.0
BYD1_k127_2463772_1 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 1.211e-218 696.0
BYD1_k127_2463772_10 metal-binding protein - - - 0.0000000000002364 70.0
BYD1_k127_2463772_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 289.0
BYD1_k127_2463772_3 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000001744 204.0
BYD1_k127_2463772_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K02199 - - 0.00000000000000000000000000000000000000000000008588 177.0
BYD1_k127_2463772_5 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000004227 169.0
BYD1_k127_2463772_6 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 - 0.0000000000000000000000000000000000000001407 158.0
BYD1_k127_2463772_7 helix_turn_helix, mercury resistance K19591 - - 0.000000000000000000000000000000000002327 143.0
BYD1_k127_2463772_8 subunit of a heme lyase K02200 - - 0.000000000000000000000000001354 120.0
BYD1_k127_2463772_9 Cytochrome C biogenesis K02200 - - 0.00000000000000003465 89.0
BYD1_k127_2485086_0 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 318.0
BYD1_k127_2485086_1 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000006279 181.0
BYD1_k127_2485086_2 MlaD protein K02067,K06192 - - 0.0000000000000000000000000000000001496 145.0
BYD1_k127_2485086_3 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.0000000000000000000000000009097 116.0
BYD1_k127_2485086_4 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000001389 77.0
BYD1_k127_248930_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 2.698e-261 834.0
BYD1_k127_248930_1 transport system fused permease components - - - 5.501e-207 662.0
BYD1_k127_248930_10 ErfK YbiS YcfS YnhG family protein K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008501 299.0
BYD1_k127_248930_11 Sigma-70 region 2 K03088 - - 0.000000000000000000000000000000000000000000000000000001717 200.0
BYD1_k127_248930_12 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000001057 189.0
BYD1_k127_248930_13 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000002755 182.0
BYD1_k127_248930_14 Domain of unknown function (DUF3520) K07114 - - 0.000000000002457 79.0
BYD1_k127_248930_2 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00758 - 2.4.2.4 5.403e-203 658.0
BYD1_k127_248930_3 Beta-Casp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 612.0
BYD1_k127_248930_4 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 475.0
BYD1_k127_248930_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 443.0
BYD1_k127_248930_6 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 412.0
BYD1_k127_248930_7 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 381.0
BYD1_k127_248930_8 Belongs to the ribose-phosphate pyrophosphokinase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 353.0
BYD1_k127_248930_9 TRAP transporter solute receptor TAXI family protein K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 305.0
BYD1_k127_2502524_0 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 0.0 1080.0
BYD1_k127_2502524_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 574.0
BYD1_k127_2502524_2 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 518.0
BYD1_k127_2502524_3 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 510.0
BYD1_k127_2502524_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 456.0
BYD1_k127_2524887_0 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 386.0
BYD1_k127_2524887_1 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000001015 194.0
BYD1_k127_2524887_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000007531 183.0
BYD1_k127_2524887_3 Molybdenum ABC transporter K02020 - - 0.00000000000000000000000000000000000000001379 159.0
BYD1_k127_2524887_4 Bacterial regulatory helix-turn-helix protein, lysR family K02019 - - 0.00000000000000000000001886 107.0
BYD1_k127_2524887_5 Domain of unknown function (DUF4266) - - - 0.0000000000000000000002908 100.0
BYD1_k127_2548456_0 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007546 350.0
BYD1_k127_2548456_1 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 331.0
BYD1_k127_2548456_10 OmpA-like transmembrane domain - - - 0.000000004314 67.0
BYD1_k127_2548456_11 Transcriptional regulator - - - 0.0001077 50.0
BYD1_k127_2548456_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003819 263.0
BYD1_k127_2548456_3 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000001408 235.0
BYD1_k127_2548456_4 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000002183 220.0
BYD1_k127_2548456_5 peptidase - - - 0.00000000000000000000000000000000000000000000000002562 195.0
BYD1_k127_2548456_6 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000005586 154.0
BYD1_k127_2548456_7 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072321 - 0.0000000000000000000000000000000000005693 145.0
BYD1_k127_2548456_8 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000000000000000004322 108.0
BYD1_k127_2548456_9 Sulfurtransferase - - - 0.00000000000000000000001902 104.0
BYD1_k127_2573153_0 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000105 275.0
BYD1_k127_2573153_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000415 267.0
BYD1_k127_2573153_2 dienelactone hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000002909 225.0
BYD1_k127_2697392_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006795 550.0
BYD1_k127_2697392_1 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 427.0
BYD1_k127_2697392_2 histidine utilization repressor K05836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 314.0
BYD1_k127_2697392_3 Sodium:solute symporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009001 267.0
BYD1_k127_2697392_4 deiminase K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000002922 218.0
BYD1_k127_2738702_0 reductase 4Fe-4S K00381 - 1.8.1.2 1.32e-239 751.0
BYD1_k127_2738702_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 6.364e-194 632.0
BYD1_k127_2738702_2 protein conserved in bacteria - - - 0.0000000000000000000000003027 114.0
BYD1_k127_2782780_0 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 556.0
BYD1_k127_2782780_1 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000006823 213.0
BYD1_k127_2782780_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000004906 208.0
BYD1_k127_281142_0 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 464.0
BYD1_k127_281142_1 long-chain fatty acid transporting porin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 352.0
BYD1_k127_2812820_0 Acetolactate synthase K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004709 522.0
BYD1_k127_2812820_1 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000005723 161.0
BYD1_k127_2815034_0 leukotriene A-4 hydrolase - - - 3.854e-227 722.0
BYD1_k127_2815034_1 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 1.749e-194 629.0
BYD1_k127_2815034_2 PFAM aldehyde oxidase and xanthine dehydrogenase a b hammerhead - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 460.0
BYD1_k127_2815034_3 ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002857 418.0
BYD1_k127_2815034_4 2Fe-2S -binding - - - 0.000000000000000000000000000000000000000000000000000000000000324 234.0
BYD1_k127_2815034_5 2Fe-2S -binding domain protein K18029 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016725,GO:0019439,GO:0044237,GO:0044248,GO:0055114 1.17.2.1 0.0000000000000000000000000000000000000000000000003259 183.0
BYD1_k127_2815034_6 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000005513 153.0
BYD1_k127_2815034_7 - - - - 0.000000000000000000000000001303 118.0
BYD1_k127_2815034_8 Transport permease protein K01992 - - 0.000000001881 68.0
BYD1_k127_2821991_0 acyl-CoA dehydrogenase K00252 - 1.3.8.6 1.684e-196 623.0
BYD1_k127_2821991_10 Protein of unknown function (DUF1161) - - - 0.0000000000000001038 81.0
BYD1_k127_2821991_11 Tetratricopeptide repeat - - - 0.000000002872 64.0
BYD1_k127_2821991_2 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 567.0
BYD1_k127_2821991_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 447.0
BYD1_k127_2821991_4 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 440.0
BYD1_k127_2821991_5 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.00000000000000000000000000000000000000000000001938 175.0
BYD1_k127_2821991_6 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000000007654 171.0
BYD1_k127_2821991_7 Tellurite resistance protein TerB - - - 0.000000000000000000000000000001706 131.0
BYD1_k127_2821991_8 Lytic murein transglycosylase K08309 - - 0.000000000000000000000000000001925 128.0
BYD1_k127_2821991_9 - - - - 0.000000000000000000000000000501 124.0
BYD1_k127_2833412_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 3.569e-219 693.0
BYD1_k127_2833412_1 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005594 276.0
BYD1_k127_2833412_2 NAD(P) transhydrogenase subunit alpha K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000002488 178.0
BYD1_k127_2833412_3 nad(P) transhydrogenase subunit alpha K00324 - 1.6.1.2 0.000000000000000000000000000000000000002059 149.0
BYD1_k127_2833412_4 - - - - 0.000000000000000002294 97.0
BYD1_k127_2833412_5 - - - - 0.000000000000000004071 94.0
BYD1_k127_2833412_6 - - - - 0.00000000000007597 76.0
BYD1_k127_2833412_7 - - - - 0.000000002104 68.0
BYD1_k127_2862173_0 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006629,GO:0006720,GO:0006793,GO:0006796,GO:0008144,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0050515,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901576 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000482 278.0
BYD1_k127_2862173_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000002561 209.0
BYD1_k127_2862173_2 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000003115 98.0
BYD1_k127_2878903_0 GMC oxidoreductase - - - 0.0 1341.0
BYD1_k127_2878903_1 Cytochrome c - - - 1.251e-310 983.0
BYD1_k127_2878903_10 Belongs to the enoyl-CoA hydratase isomerase family K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 0.000000000000000000000002546 104.0
BYD1_k127_2878903_11 Protein of unknown function (DUF3293) - - - 0.000000000125 68.0
BYD1_k127_2878903_12 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000088 67.0
BYD1_k127_2878903_2 Sulfatase K01130 - 3.1.6.1 8.427e-306 942.0
BYD1_k127_2878903_3 Dehydratase family K01690 - 4.2.1.12 2.548e-245 780.0
BYD1_k127_2878903_4 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 611.0
BYD1_k127_2878903_5 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 438.0
BYD1_k127_2878903_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001105 291.0
BYD1_k127_2878903_7 KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000002196 239.0
BYD1_k127_2878903_8 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.000000000000000000000000000000000000000000002101 178.0
BYD1_k127_2878903_9 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000007841 151.0
BYD1_k127_2959828_0 Belongs to the catalase family K03781 - 1.11.1.6 0.0 1129.0
BYD1_k127_2959828_1 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate K00381 - 1.8.1.2 1.432e-229 725.0
BYD1_k127_2959828_10 Peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000001237 217.0
BYD1_k127_2959828_11 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000001187 186.0
BYD1_k127_2959828_12 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000004379 139.0
BYD1_k127_2959828_13 Universal stress protein family K14055 - - 0.00000000000000000000000000000001956 143.0
BYD1_k127_2959828_14 transcriptional regulators K03892 - - 0.00000000000000000000000003149 112.0
BYD1_k127_2959828_15 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00001248 50.0
BYD1_k127_2959828_2 Sodium Bile acid symporter family K03325 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601 537.0
BYD1_k127_2959828_3 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component K00380 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 549.0
BYD1_k127_2959828_4 transmembrane transporter activity K13021 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 446.0
BYD1_k127_2959828_5 Glutaminase K01425 - 3.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 438.0
BYD1_k127_2959828_6 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 331.0
BYD1_k127_2959828_7 2OG-Fe dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 311.0
BYD1_k127_2959828_8 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000406 240.0
BYD1_k127_2959828_9 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.000000000000000000000000000000000000000000000000000000000004194 215.0
BYD1_k127_2960940_0 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 375.0
BYD1_k127_2960940_1 Belongs to the glycosyl hydrolase 43 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 302.0
BYD1_k127_2960940_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006563 287.0
BYD1_k127_2960940_3 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000001104 240.0
BYD1_k127_2960940_4 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000006588 196.0
BYD1_k127_2960940_5 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000000000000000000000000000004298 184.0
BYD1_k127_2960940_6 Zn-dependent - - - 0.00000000000000000000000000000000000000000008882 173.0
BYD1_k127_2960940_7 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000000000000000000000000000001796 141.0
BYD1_k127_3069139_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1075.0
BYD1_k127_3069139_1 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 362.0
BYD1_k127_3069139_2 Lactonase, 7-bladed beta-propeller - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 351.0
BYD1_k127_3069139_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000006339 106.0
BYD1_k127_3069139_4 Chorismate mutase K00014,K00891,K04092,K04516 - 1.1.1.25,2.7.1.71,5.4.99.5 0.0005016 42.0
BYD1_k127_3079928_0 Protein of unknown function (DUF1587) - - - 9.13e-211 680.0
BYD1_k127_3079928_1 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 480.0
BYD1_k127_3079928_2 ankyrin repeat K15503 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 433.0
BYD1_k127_3079928_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004835 415.0
BYD1_k127_3079928_4 PFAM alpha beta hydrolase fold K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 311.0
BYD1_k127_3079928_5 - - - - 0.00000000000000000000000000000000000000000000000000005596 201.0
BYD1_k127_3079928_6 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000972 187.0
BYD1_k127_3079928_7 - - - - 0.0000000000000000000000000000000000000000000002249 178.0
BYD1_k127_3079928_8 COGs COG2382 Enterochelin esterase K07214 - - 0.000000000000000000000001173 107.0
BYD1_k127_3131211_0 TonB-dependent Receptor Plug Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001133 580.0
BYD1_k127_3131211_1 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 349.0
BYD1_k127_3131211_2 RND efflux system, outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 329.0
BYD1_k127_3131211_3 PFAM PepSY-associated TM helix domain protein - - - 0.0000000000000000000000000000000000000000000000002149 192.0
BYD1_k127_3144373_0 Formate dehydrogenase alpha subunit K00123 - 1.17.1.9 3.387e-248 771.0
BYD1_k127_3144373_1 enoyl-CoA hydratase K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 595.0
BYD1_k127_3144373_2 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.00000007266 64.0
BYD1_k127_3144373_3 Transcriptional regulator - - - 0.00000737 56.0
BYD1_k127_3144373_4 Belongs to the UPF0311 family - - - 0.000135 51.0
BYD1_k127_3164875_0 Cytochrome C and Quinol oxidase polypeptide I K02274,K02298,K15408 - 1.10.3.10,1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 439.0
BYD1_k127_3164875_1 Cytochrome C oxidase subunit II, periplasmic domain K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000009707 258.0
BYD1_k127_3172445_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003389 569.0
BYD1_k127_3172445_1 GDP-mannose 4,6 dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 428.0
BYD1_k127_3203928_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 548.0
BYD1_k127_3203928_1 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 548.0
BYD1_k127_3203928_2 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003975 471.0
BYD1_k127_3203928_3 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 407.0
BYD1_k127_3203928_4 Universal stress protein - - - 0.00000000000004108 79.0
BYD1_k127_3203928_5 VanZ like family - - - 0.0000001206 56.0
BYD1_k127_3206701_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 3.465e-234 734.0
BYD1_k127_3206701_1 formate dehydrogenase K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 365.0
BYD1_k127_3206701_2 Formate dehydrogenase alpha subunit K00123 - 1.17.1.9 0.0000000000000000000000000001647 114.0
BYD1_k127_3227874_0 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 444.0
BYD1_k127_3227874_1 Retinal pigment epithelial membrane protein K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 363.0
BYD1_k127_3227874_2 ABC-type nitrate sulfonate bicarbonate transport system ATPase component K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 339.0
BYD1_k127_3227874_3 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 328.0
BYD1_k127_3227874_4 TIGRFAM urea carboxylase-associated protein 2 K09967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002702 293.0
BYD1_k127_3227874_5 TIGRFAM Urea carboxylase-associated protein 1 K09967 - - 0.000000000000000000000000000000000000000000000000000000000000004212 220.0
BYD1_k127_3227874_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000001082 116.0
BYD1_k127_3279029_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 1.623e-232 734.0
BYD1_k127_3279029_1 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 570.0
BYD1_k127_3279029_2 Enoyl-CoA hydratase K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000003076 255.0
BYD1_k127_3279029_3 Pfam:DUF1446 - - - 0.000000000000000000000000000000000000000000000001449 178.0
BYD1_k127_3297711_0 TonB dependent receptor K02014 - - 5.99e-294 925.0
BYD1_k127_3297711_1 Alpha/beta hydrolase of unknown function (DUF1100) - - - 7.302e-200 628.0
BYD1_k127_3297711_10 arylsulfatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003676 430.0
BYD1_k127_3297711_12 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16171 - 3.7.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003549 326.0
BYD1_k127_3297711_13 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 317.0
BYD1_k127_3297711_14 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 295.0
BYD1_k127_3297711_15 phospholipase Carboxylesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007329 273.0
BYD1_k127_3297711_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000006809 223.0
BYD1_k127_3297711_17 serine-type peptidase activity - - - 0.0000000000000000000000000000000000000000000000000001545 200.0
BYD1_k127_3297711_18 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000006947 192.0
BYD1_k127_3297711_19 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000007607 139.0
BYD1_k127_3297711_2 Putative esterase K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 588.0
BYD1_k127_3297711_20 PFAM regulatory protein MarR - - - 0.000000000000000000000000000000001088 135.0
BYD1_k127_3297711_21 COG2223 Nitrate nitrite transporter K02575 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000003259 81.0
BYD1_k127_3297711_22 - - - - 0.00000001952 67.0
BYD1_k127_3297711_23 Transcriptional regulator, MarR family - - - 0.00000008543 63.0
BYD1_k127_3297711_3 Serine hydrolase involved in the detoxification of formaldehyde - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009582 553.0
BYD1_k127_3297711_4 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000248 533.0
BYD1_k127_3297711_5 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 522.0
BYD1_k127_3297711_6 Membrane bound O-acyl transferase MBOAT family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 510.0
BYD1_k127_3297711_7 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 498.0
BYD1_k127_3297711_8 Tannase and feruloyl esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 475.0
BYD1_k127_3297711_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 454.0
BYD1_k127_3376674_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009864 295.0
BYD1_k127_3376674_1 helix_turn_helix gluconate operon transcriptional repressor - - - 0.000000000002079 72.0
BYD1_k127_3382603_0 POTRA domain TamA domain 1 K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 318.0
BYD1_k127_3382603_1 RES - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001497 269.0
BYD1_k127_3382603_2 dioxygenase of extradiol dioxygenase family K06991 - - 0.000000000000000000000000000000000000000000000000000000000003158 211.0
BYD1_k127_3382603_3 Rhomboid family - - - 0.0000000000008623 76.0
BYD1_k127_3440363_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 2.326e-227 717.0
BYD1_k127_3440363_1 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 3.209e-204 649.0
BYD1_k127_3500892_0 protein conserved in bacteria - - - 2.066e-240 765.0
BYD1_k127_3500892_1 Sodium/hydrogen exchanger family K03316 - - 6.745e-211 668.0
BYD1_k127_3500892_10 Protein of unknown function (DUF1254) K03929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001253 260.0
BYD1_k127_3500892_11 Biotin/lipoate A/B protein ligase family K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000004251 259.0
BYD1_k127_3500892_12 Domain of unknown function (DUF1993) K09983 - - 0.000000000000000000000000000000000000000000000000000000574 200.0
BYD1_k127_3500892_13 PFAM MgtC SapB transporter K07507 - - 0.000000000000000000000000000000000000000000000002074 178.0
BYD1_k127_3500892_14 PFAM ApaG domain protein K06195 - - 0.0000000000000000000000000000000000000000000001812 177.0
BYD1_k127_3500892_15 Acid phosphatase - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000004306 143.0
BYD1_k127_3500892_16 Universal stress protein K06149 - - 0.00000000000000000000114 100.0
BYD1_k127_3500892_17 - - - - 0.00000000000000000001169 94.0
BYD1_k127_3500892_18 Fatty acid desaturase - - - 0.000000000000000007216 86.0
BYD1_k127_3500892_19 Belongs to the UPF0250 family K09158 - - 0.000000000002947 69.0
BYD1_k127_3500892_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 475.0
BYD1_k127_3500892_3 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 472.0
BYD1_k127_3500892_4 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 364.0
BYD1_k127_3500892_5 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 339.0
BYD1_k127_3500892_6 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 334.0
BYD1_k127_3500892_7 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001789 281.0
BYD1_k127_3500892_8 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000226 271.0
BYD1_k127_3500892_9 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000073 264.0
BYD1_k127_3569472_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 3.686e-310 973.0
BYD1_k127_3569472_1 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 445.0
BYD1_k127_3569472_2 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000004643 224.0
BYD1_k127_3569472_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.000000000002529 76.0
BYD1_k127_358836_0 Retinal pigment epithelial membrane protein K11159 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 405.0
BYD1_k127_358836_1 of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 291.0
BYD1_k127_358836_2 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000002018 190.0
BYD1_k127_358836_3 - - - - 0.00000000000000000000000000000000000000003216 159.0
BYD1_k127_358836_4 Protein of unknown function (DUF2845) - - - 0.00000001415 57.0
BYD1_k127_360115_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 4.889e-232 732.0
BYD1_k127_360115_1 Bacterial protein of unknown function (DUF839) K07093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 434.0
BYD1_k127_360115_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003162 277.0
BYD1_k127_360115_3 TIGRFAM Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000002384 265.0
BYD1_k127_360115_4 Belongs to the WrbA family K03809 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004895 256.0
BYD1_k127_360115_5 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.0000000000000000000000000000000000000000003192 166.0
BYD1_k127_360115_6 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000001691 164.0
BYD1_k127_365084_0 2-methylcitrate dehydratase K01720 - 4.2.1.79 9.782e-211 669.0
BYD1_k127_365084_1 also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity K01659 - 2.3.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 602.0
BYD1_k127_365084_10 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.000004082 56.0
BYD1_k127_365084_2 pfam abc K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 472.0
BYD1_k127_365084_3 transport, permease protein K01992,K18233 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 429.0
BYD1_k127_365084_4 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007831 420.0
BYD1_k127_365084_5 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 286.0
BYD1_k127_365084_6 protein conserved in bacteria K09912 - - 0.0000000000000000000000000000000000000000001229 165.0
BYD1_k127_365084_7 Belongs to the ompA family K03286 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000001164 168.0
BYD1_k127_365084_8 gag-polyprotein putative aspartyl protease - - - 0.000000000000000000000000000000000000000006587 166.0
BYD1_k127_365084_9 - - - - 0.0000000000000000003934 93.0
BYD1_k127_3690244_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07641,K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007584,GO:0008150,GO:0008152,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0031667,GO:0035556,GO:0036211,GO:0042221,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 563.0
BYD1_k127_3690244_1 Inner membrane protein involved in colicin E2 resistance K06143 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 494.0
BYD1_k127_3690244_2 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000001167 229.0
BYD1_k127_3690244_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 GO:0000166,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003824,GO:0004077,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0006082,GO:0006464,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009305,GO:0009374,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0017053,GO:0017076,GO:0017144,GO:0018130,GO:0018271,GO:0019538,GO:0019752,GO:0019842,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0032991,GO:0033218,GO:0033293,GO:0034641,GO:0035639,GO:0036094,GO:0036211,GO:0042364,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043565,GO:0043603,GO:0043604,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046983,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1990837 6.3.4.15 0.00000000000000000000000000000000000000000000000000000001196 211.0
BYD1_k127_3690244_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000005402 129.0
BYD1_k127_3690244_5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07663 - - 0.0000000000000000000000000002296 115.0
BYD1_k127_3690244_6 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000001777 101.0
BYD1_k127_3690244_7 - - - - 0.0000000000042 76.0
BYD1_k127_3690244_8 PilZ domain - - - 0.00000000009315 66.0
BYD1_k127_3699260_0 Thiol oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 608.0
BYD1_k127_3699260_1 Imelysin K07231 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 569.0
BYD1_k127_3699260_2 Putative esterase K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 503.0
BYD1_k127_3699260_3 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 470.0
BYD1_k127_3699260_4 Tat pathway signal K09947 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000437 457.0
BYD1_k127_3699260_5 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 339.0
BYD1_k127_3699260_6 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005323 288.0
BYD1_k127_3699260_7 Imelysin K07338 - - 0.000000000000000000000000000000000000000000000000000000000000000000001567 250.0
BYD1_k127_3699260_8 Transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000004779 244.0
BYD1_k127_3699260_9 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2 0.0000000000000000000000000000000000000000000000000002978 190.0
BYD1_k127_3805565_0 PFAM peptidase M3A and M3B, thimet oligopeptidase F K01414 - 3.4.24.70 3.656e-226 719.0
BYD1_k127_3805565_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 GO:0000166,GO:0003674,GO:0003824,GO:0004362,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0015037,GO:0015038,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071949,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 515.0
BYD1_k127_3805565_2 Catalyzes the sodium-dependent transport of glutamate - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 436.0
BYD1_k127_3805565_3 Glycerophosphoryl diester phosphodiesterase family K01126 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008081,GO:0008889,GO:0009279,GO:0016020,GO:0016787,GO:0016788,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042578,GO:0042597,GO:0043167,GO:0043169,GO:0044462,GO:0044464,GO:0046872,GO:0071944 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 357.0
BYD1_k127_3805565_4 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001043 274.0
BYD1_k127_3805565_5 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000004113 219.0
BYD1_k127_3805565_6 sensor diguanylate cyclase phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000006353 224.0
BYD1_k127_3805565_7 Major Facilitator Superfamily K03449 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0042221,GO:0044464,GO:0046677,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000004858 148.0
BYD1_k127_3805565_8 Protein of unknown function (DUF2937) - - - 0.0000000000000000000000000000004709 129.0
BYD1_k127_3805565_9 OmpA-like transmembrane domain - - - 0.000000000000000001847 94.0
BYD1_k127_3824693_0 Pro-apoptotic serine protease nma111. Source PGD - - - 1.318e-241 778.0
BYD1_k127_3824693_1 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 1.042e-195 620.0
BYD1_k127_3824693_10 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000004072 146.0
BYD1_k127_3824693_11 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.0000000000000000000000000000000001437 142.0
BYD1_k127_3824693_12 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000005825 134.0
BYD1_k127_3824693_13 Belongs to the UPF0149 family K09895 - - 0.00000000000000000000000000003295 132.0
BYD1_k127_3824693_14 DUF167 K09131 - - 0.00000000000000000003365 95.0
BYD1_k127_3824693_15 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 GO:0000003,GO:0000278,GO:0000281,GO:0000910,GO:0000917,GO:0000921,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0007010,GO:0007049,GO:0008150,GO:0009987,GO:0016043,GO:0019954,GO:0022402,GO:0022414,GO:0022607,GO:0030428,GO:0031106,GO:0032153,GO:0032185,GO:0032505,GO:0032506,GO:0034622,GO:0042802,GO:0043093,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0051301,GO:0061640,GO:0065003,GO:0070925,GO:0071840,GO:0090529,GO:1902410,GO:1903047 - 0.00000000000003222 78.0
BYD1_k127_3824693_16 Regulator of ribonuclease activity B - - - 0.00000000006495 70.0
BYD1_k127_3824693_17 TIGRFAM TIGR02449 family protein K09892 - - 0.00000007087 61.0
BYD1_k127_3824693_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005445 609.0
BYD1_k127_3824693_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581,K01586 - 4.1.1.17,4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006055 432.0
BYD1_k127_3824693_4 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 358.0
BYD1_k127_3824693_5 hydroxylase K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 349.0
BYD1_k127_3824693_6 Belongs to the SUA5 family K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 333.0
BYD1_k127_3824693_7 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009539 278.0
BYD1_k127_3824693_8 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001319 256.0
BYD1_k127_3824693_9 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000002713 204.0
BYD1_k127_3870207_0 D-isomer specific 2-hydroxyacid dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005969 405.0
BYD1_k127_3870207_1 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000003256 175.0
BYD1_k127_3870207_2 Bacterial protein of unknown function (Gcw_chp) - - - 0.0000000000000000000000000000000000003723 148.0
BYD1_k127_3870207_3 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000133 131.0
BYD1_k127_3870207_4 COG4240 Predicted kinase K15918 - 2.7.1.31 0.000000000000000000000001449 106.0
BYD1_k127_3887487_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 361.0
BYD1_k127_3887487_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000277 295.0
BYD1_k127_3887487_2 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000004018 251.0
BYD1_k127_3887487_3 - - - - 0.0000000000000000000000000000000000000001413 154.0
BYD1_k127_3887487_4 Haem-degrading - - - 0.0000000000000000000000000000000000003851 155.0
BYD1_k127_3894205_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1043.0
BYD1_k127_3894205_1 Protein of unknown function (DUF2817) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004604 302.0
BYD1_k127_3894205_2 GAF domain-containing protein K08968 - 1.8.4.14 0.0000000000000000000000000000000000000000000000000005298 192.0
BYD1_k127_3894205_3 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000001612 136.0
BYD1_k127_3894205_4 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000946 132.0
BYD1_k127_3894205_5 - - - - 0.000000000000002679 81.0
BYD1_k127_3897962_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 612.0
BYD1_k127_3897962_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 418.0
BYD1_k127_3897962_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 410.0
BYD1_k127_3897962_3 - - - - 0.00000000000000000000000000000000000000000003097 168.0
BYD1_k127_3897962_4 Thioredoxin-like - - - 0.00000000000000000000000000000005172 131.0
BYD1_k127_3897962_5 - - - - 0.00000000000000000000002059 108.0
BYD1_k127_3897962_6 Tetratricopeptide repeat - - - 0.00000000000002777 88.0
BYD1_k127_3906943_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 373.0
BYD1_k127_3906943_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002696 346.0
BYD1_k127_3906943_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 336.0
BYD1_k127_3906943_3 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001075 278.0
BYD1_k127_3906943_4 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000002142 132.0
BYD1_k127_3921213_0 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 492.0
BYD1_k127_3921213_1 PFAM major facilitator superfamily MFS_1 K08169 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 471.0
BYD1_k127_3921213_2 Predicted integral membrane protein (DUF2269) - - - 0.0000000000000000001261 89.0
BYD1_k127_3926354_0 Belongs to the cysteine synthase cystathionine beta- synthase family K01697,K01738 - 2.5.1.47,4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 454.0
BYD1_k127_3926354_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303,K02304 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 424.0
BYD1_k127_3926354_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 346.0
BYD1_k127_3926354_3 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 309.0
BYD1_k127_3926354_4 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000425 280.0
BYD1_k127_3926354_5 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000863 276.0
BYD1_k127_3926354_6 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000007771 258.0
BYD1_k127_3954146_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 559.0
BYD1_k127_3954146_1 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 584.0
BYD1_k127_3954146_2 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 515.0
BYD1_k127_3954146_3 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 529.0
BYD1_k127_3954146_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 490.0
BYD1_k127_3954146_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 439.0
BYD1_k127_3954146_6 Histidine kinase K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 344.0
BYD1_k127_3954146_7 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000001002 241.0
BYD1_k127_3954146_8 Domain of unknown function (DUF4974) K07165 - - 0.00000000000000000000000000000000000000000000123 181.0
BYD1_k127_3954146_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000006433 143.0
BYD1_k127_3963517_0 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 519.0
BYD1_k127_3963517_1 PFAM iron-containing alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 413.0
BYD1_k127_3963517_2 PFAM Prokaryotic protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 404.0
BYD1_k127_3963517_3 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001777 275.0
BYD1_k127_3963517_4 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000009478 190.0
BYD1_k127_3969612_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 350.0
BYD1_k127_3969612_1 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 321.0
BYD1_k127_3969612_2 protein containing LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003012 265.0
BYD1_k127_3969612_3 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000009675 218.0
BYD1_k127_3969612_4 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000003739 213.0
BYD1_k127_3969612_5 Domain of unknown function (DUF4390) - - - 0.00002405 54.0
BYD1_k127_3991016_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001573 252.0
BYD1_k127_3991016_1 Penicillinase repressor - - - 0.00000000000000000000000000000000000002478 147.0
BYD1_k127_3991016_2 BlaR1 peptidase M56 - - - 0.000000000000000000000003489 110.0
BYD1_k127_4014402_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 340.0
BYD1_k127_4014402_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000002691 221.0
BYD1_k127_4174839_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 477.0
BYD1_k127_4174839_1 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 335.0
BYD1_k127_4174839_2 HutD K09975 - - 0.0000000000000000000000000000000000000000000000852 175.0
BYD1_k127_4174839_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000006443 134.0
BYD1_k127_4174839_4 - - - - 0.0001034 53.0
BYD1_k127_4190609_0 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 335.0
BYD1_k127_4190609_1 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 320.0
BYD1_k127_4190609_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000004514 237.0
BYD1_k127_4190609_3 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000000129 190.0
BYD1_k127_4229500_0 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 4.098e-223 702.0
BYD1_k127_4229500_1 major facilitator superfamily K03446 - - 4.154e-204 645.0
BYD1_k127_4229500_2 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000001549 164.0
BYD1_k127_4229500_3 Belongs to the UPF0311 family - - - 0.0000000000000000000000000000000000000000006583 164.0
BYD1_k127_4229500_4 PFAM HupE UreJ protein K03192 - - 0.0000000000000000000000004281 111.0
BYD1_k127_4237897_0 AcrB/AcrD/AcrF family - - - 9.957e-302 938.0
BYD1_k127_4280366_0 formate dehydrogenase, alpha subunit K00123,K22015 - 1.17.1.9,1.17.99.7 0.0 1395.0
BYD1_k127_4280366_1 PFAM Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 8.276e-321 989.0
BYD1_k127_4280366_2 ligase activity, forming carbon-carbon bonds K07402 - - 0.0000000000000000000000000000000000000000000002165 177.0
BYD1_k127_4312591_0 TonB dependent receptor - - - 1.346e-241 780.0
BYD1_k127_4312591_1 PFAM ABC transporter K06158 - - 1.082e-212 678.0
BYD1_k127_4312591_10 Outer membrane receptor K02014 - - 0.0009015 46.0
BYD1_k127_4312591_2 Domain of unknown function DUF21 K03699 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005014 361.0
BYD1_k127_4312591_3 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 329.0
BYD1_k127_4312591_4 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 304.0
BYD1_k127_4312591_5 transmembrane spans. The family include ribonuclease BN that is involved in tRNA maturation P32146. This family of proteins does not seem to contain any completely conserved polar residues that would be expected in a nuclease enzyme, suggesting that many members of this family may not have this catalytic activity K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 294.0
BYD1_k127_4312591_6 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000135 280.0
BYD1_k127_4312591_7 Translation initiation factor SUI1 K03113 - - 0.000000000000000000002821 97.0
BYD1_k127_4312591_8 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000001018 97.0
BYD1_k127_4312591_9 Outer membrane receptor - - - 0.00000004642 60.0
BYD1_k127_4314565_0 Belongs to the heat shock protein 70 family K04046 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 431.0
BYD1_k127_4314565_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 363.0
BYD1_k127_4314565_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 366.0
BYD1_k127_4314565_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 359.0
BYD1_k127_4314565_4 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 335.0
BYD1_k127_4314565_5 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005554 314.0
BYD1_k127_4314565_6 Methyl-accepting chemotaxis protein (MCP) signalling domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 311.0
BYD1_k127_4314565_7 Branched-chain amino acid ATP-binding cassette transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005485 309.0
BYD1_k127_4314565_8 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.000000000000000000000000000000000000000000000000001357 190.0
BYD1_k127_4384442_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 9.205e-211 662.0
BYD1_k127_4384442_1 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003301 506.0
BYD1_k127_4384442_2 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001058 281.0
BYD1_k127_4384442_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000000000000001315 260.0
BYD1_k127_4384442_4 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000000001238 162.0
BYD1_k127_4384442_5 AntiSigma factor - - - 0.00000000000000000000006801 107.0
BYD1_k127_4412391_0 Protein of unknown function (DUF1552) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003909 283.0
BYD1_k127_4412391_1 Protein of unknown function (DUF1595) - - - 0.0000000000000000000000000000000000000000000000000000000000006791 218.0
BYD1_k127_4413514_0 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.173,2.1.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 354.0
BYD1_k127_4413514_1 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007575 357.0
BYD1_k127_4413514_2 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000001416 216.0
BYD1_k127_4413514_3 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 0.00000000000000000003784 95.0
BYD1_k127_4425989_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 339.0
BYD1_k127_4425989_1 PFAM transposase, IS4 family protein - - - 0.0000000000000000000000000000000000000000000000000004923 186.0
BYD1_k127_4425989_2 Glyoxalase-like domain - - - 0.000000000000000000000000000000002497 130.0
BYD1_k127_4437737_0 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 407.0
BYD1_k127_4519351_0 ATP-dependent helicase HrpB K03579 - 3.6.4.13 2.996e-231 742.0
BYD1_k127_4519351_1 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 301.0
BYD1_k127_4519351_2 Phosphoribosyl transferase domain K07101 - - 0.0000000000000000000000000000000000000000000000000000000000000002226 234.0
BYD1_k127_4519351_3 Glutathione S-transferase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000006524 215.0
BYD1_k127_4519351_4 membrane K08973 - - 0.00000000000000000000000000000000000000008794 154.0
BYD1_k127_4519351_5 PFAM CAAX amino terminal protease family K07052 - - 0.00000000007246 66.0
BYD1_k127_4536265_0 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 498.0
BYD1_k127_4536265_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 394.0
BYD1_k127_4536265_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 384.0
BYD1_k127_4536265_3 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000004806 89.0
BYD1_k127_4597938_0 TonB dependent receptor - - - 0.0 1192.0
BYD1_k127_4597938_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 5.036e-248 785.0
BYD1_k127_4597938_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 9.664e-247 785.0
BYD1_k127_4597938_3 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000431 373.0
BYD1_k127_4597938_4 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 322.0
BYD1_k127_4597938_5 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000003628 166.0
BYD1_k127_4672111_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 1.345e-223 696.0
BYD1_k127_4672111_1 FAD linked oxidases, C-terminal domain K05797 - 1.17.99.1 1.022e-218 689.0
BYD1_k127_4672111_10 Glycosyl transferases group 1 - - - 0.0000002323 62.0
BYD1_k127_4672111_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 367.0
BYD1_k127_4672111_3 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 284.0
BYD1_k127_4672111_4 UreF - - - 0.00000000000000000000000000000000000000000000000000000000000000000000904 243.0
BYD1_k127_4672111_5 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000003846 168.0
BYD1_k127_4672111_6 Urease accessory protein K03192 - - 0.000000000000000000000004098 110.0
BYD1_k127_4672111_7 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000005896 98.0
BYD1_k127_4672111_8 RHS Repeat - - - 0.0000000000000000001714 94.0
BYD1_k127_4672111_9 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000001052 78.0
BYD1_k127_4683714_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1270.0
BYD1_k127_4683714_1 receptor K02014 - - 1.008e-318 995.0
BYD1_k127_4683714_10 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 348.0
BYD1_k127_4683714_11 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 313.0
BYD1_k127_4683714_12 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004305 322.0
BYD1_k127_4683714_13 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001604 293.0
BYD1_k127_4683714_14 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000003862 229.0
BYD1_k127_4683714_15 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000006948 226.0
BYD1_k127_4683714_16 nitrogen fixation sensor protein fixL K14986 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000005565 220.0
BYD1_k127_4683714_17 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000008655 206.0
BYD1_k127_4683714_18 Flagellar Assembly Protein A K09749 - - 0.0000000000000000000000000000000000000000000000001625 192.0
BYD1_k127_4683714_19 cytochrome C, class I - - - 0.0000000000000000000000000000000000000000000002691 175.0
BYD1_k127_4683714_2 Dehydrogenase K17760 - 1.1.9.1 7.964e-251 795.0
BYD1_k127_4683714_20 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000233 171.0
BYD1_k127_4683714_21 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000002052 149.0
BYD1_k127_4683714_22 PFAM Cytochrome C - - - 0.00000000000000000000000000000000000002613 160.0
BYD1_k127_4683714_23 Domain present in phytochromes and cGMP-specific phosphodiesterases. K12266 - - 0.0000000000000000000000000000000000003864 148.0
BYD1_k127_4683714_24 cytochrome c K00406 - - 0.000000000000000000000000000001944 125.0
BYD1_k127_4683714_25 universal stress protein K14055 - - 0.0000000000000000000000000006867 126.0
BYD1_k127_4683714_26 Flavodoxin-like fold - - - 0.000000000000000000000000002218 115.0
BYD1_k127_4683714_27 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000004696 108.0
BYD1_k127_4683714_28 transcriptional regulator PadR family - - - 0.00000000000000000000000491 104.0
BYD1_k127_4683714_29 Flavodoxin-like fold - - - 0.00000000000000000000002146 104.0
BYD1_k127_4683714_3 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 453.0
BYD1_k127_4683714_30 COG2010 Cytochrome c, mono- and diheme variants - - - 0.00000000000000000000004835 104.0
BYD1_k127_4683714_31 PFAM zinc finger, DksA TraR C4-type - - - 0.0000000000000000003314 100.0
BYD1_k127_4683714_4 PFAM multicopper oxidase type 1 K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 443.0
BYD1_k127_4683714_5 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 446.0
BYD1_k127_4683714_6 Multicopper oxidase K00368 - 1.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 405.0
BYD1_k127_4683714_7 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 409.0
BYD1_k127_4683714_8 in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 356.0
BYD1_k127_4683714_9 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 357.0
BYD1_k127_4701654_0 alcohol dehydrogenase K17760 - 1.1.9.1 5.075e-201 658.0
BYD1_k127_4701654_1 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 512.0
BYD1_k127_4701654_11 - - - - 0.00000000000000000000000000000000000000007129 169.0
BYD1_k127_4701654_12 Belongs to the UPF0311 family - - - 0.00000000000000000000000000000000000008932 146.0
BYD1_k127_4701654_13 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000001925 134.0
BYD1_k127_4701654_14 Protein of unknown function (DUF3237) - - - 0.00000000000000000000000000000006887 132.0
BYD1_k127_4701654_15 - - - - 0.000000000000000000000000000000114 128.0
BYD1_k127_4701654_16 SnoaL-like domain - - - 0.0000000000000000000000000000005592 134.0
BYD1_k127_4701654_17 NmrA family K19267 - 1.6.5.2 0.0000000000000000000000000000234 132.0
BYD1_k127_4701654_18 Protein of unknown function (DUF3237) - - - 0.000000000000000000000006943 110.0
BYD1_k127_4701654_19 Belongs to the type-B carboxylesterase lipase family - - - 0.0000000000001183 76.0
BYD1_k127_4701654_2 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 392.0
BYD1_k127_4701654_20 SnoaL-like domain - - - 0.000000001065 66.0
BYD1_k127_4701654_21 Cys/Met metabolism PLP-dependent enzyme K01761 - 4.4.1.11 0.00000003289 55.0
BYD1_k127_4701654_3 Branched-chain amino acid transport system / permease component K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 390.0
BYD1_k127_4701654_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 374.0
BYD1_k127_4701654_5 Major facilitator superfamily K08195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 359.0
BYD1_k127_4701654_6 dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 316.0
BYD1_k127_4701654_7 Gluconolaconase K14274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 319.0
BYD1_k127_4701654_8 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003211 287.0
BYD1_k127_4701654_9 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001094 276.0
BYD1_k127_4715259_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 338.0
BYD1_k127_4715259_1 formate dehydrogenase, alpha subunit K00123,K22015 - 1.17.1.9,1.17.99.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001944 263.0
BYD1_k127_4715259_2 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000008411 226.0
BYD1_k127_4715259_3 MobA-like NTP transferase domain K03752 - 2.7.7.77 0.000000000005268 69.0
BYD1_k127_4743277_0 Putative glutamine amidotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 542.0
BYD1_k127_4743277_1 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008252 460.0
BYD1_k127_4743277_2 Associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 425.0
BYD1_k127_4743277_3 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 398.0
BYD1_k127_4743277_4 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 303.0
BYD1_k127_4743277_5 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000002591 179.0
BYD1_k127_4743277_6 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000001163 168.0
BYD1_k127_4816290_0 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 505.0
BYD1_k127_4816290_1 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000005032 156.0
BYD1_k127_4816290_2 membrane transporter protein - - - 0.00000000000002438 74.0
BYD1_k127_4820855_0 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000000000000000000006752 165.0
BYD1_k127_4820855_1 Prokaryotic cytochrome b561 - - - 0.000000005175 60.0
BYD1_k127_4820855_2 Cytochrome C' - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000005216 61.0
BYD1_k127_4885831_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 4.804e-233 726.0
BYD1_k127_4885831_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 538.0
BYD1_k127_4885831_2 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 377.0
BYD1_k127_4885831_3 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004366 261.0
BYD1_k127_4885831_4 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000117 93.0
BYD1_k127_4885831_5 TIGRFAM MJ0042 family finger-like protein - - - 0.0000000000001587 82.0
BYD1_k127_4935390_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 0.0 1017.0
BYD1_k127_4935390_1 Leucyl/phenylalanyl-tRNA protein transferase K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000001313 256.0
BYD1_k127_4935390_2 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000001495 241.0
BYD1_k127_4935390_3 secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000005611 241.0
BYD1_k127_4935390_4 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000001723 149.0
BYD1_k127_4935390_5 Translation initiation factor 1A / IF-1 K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000008951 130.0
BYD1_k127_4935390_6 Type II secretion system protein C - - - 0.0000000000000000000000000002526 126.0
BYD1_k127_4935503_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.0 1274.0
BYD1_k127_4935503_1 thiamine-containing compound biosynthetic process K02051 - - 5.307e-244 771.0
BYD1_k127_4935503_10 Belongs to the bacterial solute-binding protein 9 family K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 359.0
BYD1_k127_4935503_11 ABC transporter K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 361.0
BYD1_k127_4935503_12 PspA/IM30 family K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 342.0
BYD1_k127_4935503_13 Domain of unknown function (DUF4198) K02009 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 329.0
BYD1_k127_4935503_14 Manganese ABC transporter ATP-binding protein K09817 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000244 269.0
BYD1_k127_4935503_15 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.000000000000000000000000000000000000000000000000000000000000001549 224.0
BYD1_k127_4935503_16 - - - - 0.000000000000000000000000000000000000000000000000000000000002181 219.0
BYD1_k127_4935503_17 Zinc-uptake complex component A periplasmic - - - 0.0000000000000000000000000000000000000000000000001019 200.0
BYD1_k127_4935503_19 - - - - 0.000000000000000000000000004452 113.0
BYD1_k127_4935503_2 Na+/Pi-cotransporter - - - 3.029e-221 697.0
BYD1_k127_4935503_3 ATPase family associated with various cellular activities (AAA) - - - 1.495e-218 691.0
BYD1_k127_4935503_4 Dehydrogenase K17760 - 1.1.9.1 1.522e-200 649.0
BYD1_k127_4935503_5 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 569.0
BYD1_k127_4935503_6 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 564.0
BYD1_k127_4935503_7 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 474.0
BYD1_k127_4935503_8 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 402.0
BYD1_k127_4935503_9 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 399.0
BYD1_k127_4939287_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1197.0
BYD1_k127_4939287_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007877 551.0
BYD1_k127_4939287_10 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 294.0
BYD1_k127_4939287_11 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001269 281.0
BYD1_k127_4939287_12 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000003735 263.0
BYD1_k127_4939287_13 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000007853 265.0
BYD1_k127_4939287_14 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002146 254.0
BYD1_k127_4939287_15 Competence protein ComEC Rec2 K02238 - - 0.00000000000000000000000000000000000000000000000000000000000004146 238.0
BYD1_k127_4939287_16 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000006783 216.0
BYD1_k127_4939287_17 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000005846 216.0
BYD1_k127_4939287_18 Molybdopterin-guanine dinucleotide biosynthesis protein B K03753 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0005488,GO:0005525,GO:0017076,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000003464 205.0
BYD1_k127_4939287_19 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000002576 184.0
BYD1_k127_4939287_2 regulatory protein LysR K07219 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 464.0
BYD1_k127_4939287_20 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.000000000000000000000000000000000000002185 147.0
BYD1_k127_4939287_21 protein conserved in bacteria K09928 - - 0.0000000000000000000000000000000004829 144.0
BYD1_k127_4939287_22 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000001615 135.0
BYD1_k127_4939287_23 COG0848 Biopolymer transport protein K03559 - - 0.00000000000000000000000003367 117.0
BYD1_k127_4939287_24 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000239 111.0
BYD1_k127_4939287_25 Belongs to the UPF0434 family K09791 - - 0.0000000000000000002264 88.0
BYD1_k127_4939287_26 - - - - 0.0000000000000000002405 92.0
BYD1_k127_4939287_27 Transcriptional regulator, MarR - - - 0.00000000000004244 83.0
BYD1_k127_4939287_28 Domain of unknown function (DUF4845) - - - 0.0000000000003489 76.0
BYD1_k127_4939287_29 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000004965 71.0
BYD1_k127_4939287_3 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 443.0
BYD1_k127_4939287_30 Peptidoglycan-binding protein, CsiV - - - 0.000008327 57.0
BYD1_k127_4939287_4 Lipoprotein releasing system transmembrane protein K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 416.0
BYD1_k127_4939287_5 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 374.0
BYD1_k127_4939287_6 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 349.0
BYD1_k127_4939287_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 322.0
BYD1_k127_4939287_8 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009537 296.0
BYD1_k127_4939287_9 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 298.0
BYD1_k127_4951354_0 FAD dependent oxidoreductase K00303,K10816 - 1.4.99.5,1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 599.0
BYD1_k127_4951354_1 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002362 401.0
BYD1_k127_4951354_2 with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine K01664 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000002333 252.0
BYD1_k127_4951354_3 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000001758 251.0
BYD1_k127_4951354_4 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001203 228.0
BYD1_k127_4999864_0 PFAM Molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 404.0
BYD1_k127_4999864_1 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 0.000000000000000000000000000000000000003428 153.0
BYD1_k127_4999864_2 formate dehydrogenase - - - 0.00000000000000000007506 96.0
BYD1_k127_5053685_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002363 306.0
BYD1_k127_5053685_1 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000001526 143.0
BYD1_k127_5053685_2 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000007847 133.0
BYD1_k127_5053685_3 Peptidase family M49 - - - 0.00000000002317 67.0
BYD1_k127_5054660_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.17e-238 758.0
BYD1_k127_5054660_1 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 539.0
BYD1_k127_5054660_2 ABC transporter K01990 - - 0.00000000000001774 74.0
BYD1_k127_5085812_0 multicopper - - - 3.906e-285 892.0
BYD1_k127_5085812_1 helix_turn_helix, Lux Regulon K03556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 578.0
BYD1_k127_5085812_2 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008254 339.0
BYD1_k127_5085812_3 Copper resistance K07233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 308.0
BYD1_k127_5085812_4 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000001446 206.0
BYD1_k127_5085812_5 resistance protein CopC K07156 - - 0.000001518 56.0
BYD1_k127_5085812_6 Protein of unknown function, DUF - - - 0.00002242 48.0
BYD1_k127_513865_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 438.0
BYD1_k127_513865_1 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003367 284.0
BYD1_k127_513865_2 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000000001154 194.0
BYD1_k127_513865_3 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000000000000000000000000000000000000000000000359 180.0
BYD1_k127_513865_4 Bacterial antitoxin of type II TA system, VapB - - - 0.00000000000000000002646 93.0
BYD1_k127_52990_0 O-methyltransferase activity - - - 0.000000000000000000000000000000000002917 149.0
BYD1_k127_52990_1 Type VI secretion K07169,K11894,K11913 - - 0.0000000000000000000000000000003741 137.0
BYD1_k127_52990_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000002859 100.0
BYD1_k127_5331526_0 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003146 258.0
BYD1_k127_5331526_1 ABC transporter ATP-binding protein K11963 - - 0.0000000000000000000000000000000000000000000000000000001019 196.0
BYD1_k127_5331526_2 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.0000000000000000000000000000000000000000000000112 175.0
BYD1_k127_5331526_3 Belongs to the urease beta subunit family K01429 - 3.5.1.5 0.000000000000000000000000000000000000000001817 158.0
BYD1_k127_5331526_4 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.00000000000000000000000000000000000007592 148.0
BYD1_k127_5386801_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 8.568e-267 831.0
BYD1_k127_5386801_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 494.0
BYD1_k127_5386801_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 400.0
BYD1_k127_5386801_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 358.0
BYD1_k127_5386801_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0015939,GO:0015940,GO:0015949,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0050896,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000003561 250.0
BYD1_k127_5386801_5 Chorismate mutase type II K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000009552 196.0
BYD1_k127_5386801_6 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000001143 153.0
BYD1_k127_5386801_7 competence protein ComEA K02237 - - 0.0000000000000000001388 97.0
BYD1_k127_5391678_0 Xylulose kinase K00854 - 2.7.1.17 8.961e-240 752.0
BYD1_k127_5391678_1 Belongs to the xylose isomerase family K01805 GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 1.666e-235 730.0
BYD1_k127_5391678_2 the major facilitator superfamily K08166,K08167 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007987 441.0
BYD1_k127_5391678_3 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 351.0
BYD1_k127_5391678_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 307.0
BYD1_k127_5391678_5 Competence-damaged protein K03743 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016811,GO:0019159 3.5.1.42 0.000000000000000000000000000000000000000000001692 169.0
BYD1_k127_5394489_0 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 327.0
BYD1_k127_5394489_1 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001394 210.0
BYD1_k127_5394489_2 Type II secretory pathway component ExeA K02450,K12283 - - 0.0000000000000000000000000000000000000008217 159.0
BYD1_k127_5408356_0 MMPL family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 500.0
BYD1_k127_5408356_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007437 381.0
BYD1_k127_5408356_2 Bacteriophytochrome (Light-regulated signal transduction histidine kinase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009322 295.0
BYD1_k127_5408356_3 Bacteriophytochrome (Light-regulated signal transduction histidine kinase) - - - 0.000000000000000000000000000000000000000000000000000000000001281 218.0
BYD1_k127_5426996_0 PFAM Neutral alkaline nonlysosomal ceramidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 539.0
BYD1_k127_5426996_1 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 445.0
BYD1_k127_5426996_2 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000006043 232.0
BYD1_k127_5426996_3 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000001719 132.0
BYD1_k127_5426996_4 phospholipase Carboxylesterase - - - 0.00000000000000000000002267 113.0
BYD1_k127_545730_0 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 1.03e-293 925.0
BYD1_k127_545730_1 GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004546 345.0
BYD1_k127_545730_2 PFAM YkuD domain K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001804 288.0
BYD1_k127_545730_3 PFAM SMP-30 Gluconolaconase - - - 0.000000003668 62.0
BYD1_k127_545730_4 - - - - 0.000000139 63.0
BYD1_k127_5470475_0 Efflux pump membrane transporter K18299 - - 1.285e-211 672.0
BYD1_k127_5470475_1 FAD linked oxidases, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 515.0
BYD1_k127_5470475_2 PFAM Outer membrane efflux protein K18300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000763 434.0
BYD1_k127_5470475_3 PFAM Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002136 263.0
BYD1_k127_5470475_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000001339 226.0
BYD1_k127_5470475_5 helix_turn_helix, Lux Regulon K02479 - - 0.000000000000000000000000000000000000000000000000000000005625 216.0
BYD1_k127_5470475_6 DNA recombination K03497,K13582 - - 0.0000000000000009267 91.0
BYD1_k127_5485684_0 Na+/H+ antiporter family K03315 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003372 526.0
BYD1_k127_5485684_1 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 301.0
BYD1_k127_5485684_2 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000163 238.0
BYD1_k127_5485684_3 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.00000000000000000000000000000000000000000000000001019 182.0
BYD1_k127_5485684_4 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000004454 161.0
BYD1_k127_5485684_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000002566 145.0
BYD1_k127_5485684_6 Transcriptional regulator K07729 - - 0.00000000000000000000000000002696 118.0
BYD1_k127_5485684_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000001463 59.0
BYD1_k127_5485684_8 Domain of unknown function (DUF4382) - - - 0.00007178 55.0
BYD1_k127_5493231_0 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009706 374.0
BYD1_k127_5493231_1 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 355.0
BYD1_k127_5493231_2 Flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006313 361.0
BYD1_k127_5493231_3 Flagellar biosynthesis protein flgN K02399 - - 0.0001116 51.0
BYD1_k127_5512655_0 lipolytic protein G-D-S-L family - - - 2.906e-211 668.0
BYD1_k127_5512655_1 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 8.098e-211 664.0
BYD1_k127_5512655_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000001024 224.0
BYD1_k127_5512655_11 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000481 153.0
BYD1_k127_5512655_12 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0033554,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0050896,GO:0051716,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000154 130.0
BYD1_k127_5512655_13 protein, YerC YecD - - - 0.0000000000000000000000001324 109.0
BYD1_k127_5512655_14 Bacterial protein of unknown function (DUF922) - - - 0.0000000000004885 78.0
BYD1_k127_5512655_15 - - - - 0.000000000001467 79.0
BYD1_k127_5512655_16 - - - - 0.00000000001632 75.0
BYD1_k127_5512655_2 cystathionine K01739 - 2.5.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 494.0
BYD1_k127_5512655_3 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 465.0
BYD1_k127_5512655_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 449.0
BYD1_k127_5512655_5 Histidine biosynthesis bifunctional protein HisB K01089,K01693 GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0004424,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042578,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 424.0
BYD1_k127_5512655_6 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 317.0
BYD1_k127_5512655_7 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 299.0
BYD1_k127_5512655_8 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000007211 260.0
BYD1_k127_5512655_9 Belongs to the AB hydrolase superfamily. MetX family K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000004979 241.0
BYD1_k127_5578804_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009983 439.0
BYD1_k127_5578804_1 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002351 445.0
BYD1_k127_5578804_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 356.0
BYD1_k127_5578804_3 serine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 357.0
BYD1_k127_5578804_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000008963 186.0
BYD1_k127_5578804_5 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000004457 93.0
BYD1_k127_5578804_6 - - - - 0.000000000000000001709 98.0
BYD1_k127_5578804_7 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000004508 94.0
BYD1_k127_5578804_8 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000231 80.0
BYD1_k127_5578804_9 Maf-like protein K06287 - - 0.00000000001631 66.0
BYD1_k127_5586254_0 DNA topological change K03168 - 5.99.1.2 0.0000000000000000000000000000000000000002408 160.0
BYD1_k127_5586254_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000002091 132.0
BYD1_k127_5595705_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 5.379e-247 790.0
BYD1_k127_5595705_1 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 533.0
BYD1_k127_5595705_2 Hydrolase of X-linked nucleoside diphosphate N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 306.0
BYD1_k127_5595705_3 Probable molybdopterin binding domain K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 294.0
BYD1_k127_5595705_4 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000001054 230.0
BYD1_k127_5595705_5 XdhC Rossmann domain K07402 - - 0.00000000000000000000000000000000000000000000000000000000000009255 220.0
BYD1_k127_5595705_6 XdhC and CoxI family - - - 0.00000000000000000000000000000000348 133.0
BYD1_k127_5595705_7 bacterial OsmY and nodulation domain - - - 0.0000000000005997 73.0
BYD1_k127_5635790_0 homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 414.0
BYD1_k127_5635790_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 313.0
BYD1_k127_5654197_0 Aldehyde dehydrogenase family - - - 2.027e-229 719.0
BYD1_k127_5654197_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 4.649e-227 719.0
BYD1_k127_5654197_10 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007326 259.0
BYD1_k127_5654197_12 of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007476 258.0
BYD1_k127_5654197_13 Protein of unknown function (DUF3297) - - - 0.00000000000000000000000000000006909 126.0
BYD1_k127_5654197_14 - - - - 0.000000000000000000000003807 107.0
BYD1_k127_5654197_15 - - - - 0.00000000000000000000123 106.0
BYD1_k127_5654197_16 - - - - 0.0000000000000000001035 100.0
BYD1_k127_5654197_17 Short C-terminal domain - - - 0.000000000004438 71.0
BYD1_k127_5654197_18 SnoaL-like domain - - - 0.000000002482 66.0
BYD1_k127_5654197_19 DNA-templated transcription, initiation - - - 0.00000007995 64.0
BYD1_k127_5654197_2 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 1.255e-198 639.0
BYD1_k127_5654197_3 PQQ-like domain K00114,K17760,K22473 - 1.1.2.8,1.1.5.5,1.1.9.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006405 616.0
BYD1_k127_5654197_4 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 595.0
BYD1_k127_5654197_5 Alcohol dehydrogenase GroES-like domain K00055 - 1.1.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 543.0
BYD1_k127_5654197_6 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 371.0
BYD1_k127_5654197_7 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 353.0
BYD1_k127_5654197_8 COG3670 Lignostilbene-alpha,beta-dioxygenase and related enzymes K11159 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 349.0
BYD1_k127_5654197_9 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002552 283.0
BYD1_k127_565596_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005772 366.0
BYD1_k127_565596_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007279 298.0
BYD1_k127_565596_2 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000009459 126.0
BYD1_k127_565596_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.00006198 49.0
BYD1_k127_5661471_0 Monomeric isocitrate dehydrogenase K00031 - 1.1.1.42 4.074e-316 983.0
BYD1_k127_5661471_1 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 472.0
BYD1_k127_5661471_2 PFAM chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002796 281.0
BYD1_k127_5662338_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1093.0
BYD1_k127_5662338_1 GyrI-like small molecule binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 306.0
BYD1_k127_5662338_2 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000166 230.0
BYD1_k127_5662338_3 DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000003859 191.0
BYD1_k127_5662338_4 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000007087 166.0
BYD1_k127_5662338_5 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.00000000000000000000000000000000001811 143.0
BYD1_k127_5675026_0 TonB-dependent receptor K02014 - - 1.912e-214 687.0
BYD1_k127_5675026_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006783 508.0
BYD1_k127_5675026_10 response to copper ion K02388,K02396 - - 0.00000000000001384 88.0
BYD1_k127_5675026_11 - - - - 0.00000000002061 69.0
BYD1_k127_5675026_2 PFAM AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 318.0
BYD1_k127_5675026_3 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 289.0
BYD1_k127_5675026_4 Alpha-tubulin suppressor and related RCC1 domain-containing - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006158 302.0
BYD1_k127_5675026_5 type I secretion outer membrane protein, TolC K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000001063 243.0
BYD1_k127_5675026_6 protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000281 192.0
BYD1_k127_5675026_7 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000000000000000000000000000001605 179.0
BYD1_k127_5675026_8 transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000002393 129.0
BYD1_k127_5675026_9 O-acyltransferase activity - - - 0.0000000000000000000000000000008998 129.0
BYD1_k127_5680346_0 TamB, inner membrane protein subunit of TAM complex K09800 - - 5.184e-242 801.0
BYD1_k127_5680346_1 surface antigen (D15) K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008525 428.0
BYD1_k127_5680346_2 - - - - 0.00000000000000000000000003611 124.0
BYD1_k127_5688123_0 von Willebrand factor (VWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001316 286.0
BYD1_k127_5688123_1 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000007213 240.0
BYD1_k127_5688123_2 Secreted protein, containing von Willebrand factor (VWF) type - - - 0.00000000000000000000000000000000000000000000000000000000002481 218.0
BYD1_k127_5688123_3 - - - - 0.00000003778 65.0
BYD1_k127_5693529_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006588 471.0
BYD1_k127_5693529_1 UDP-3-O-acyl N-acetylglycosamine deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009264 409.0
BYD1_k127_5693529_2 Peptidase family M23 - - - 0.000000000005396 69.0
BYD1_k127_5752931_0 histidine kinase HAMP region domain protein K07716 - 2.7.13.3 0.0 1579.0
BYD1_k127_5752931_1 PhoQ Sensor K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 488.0
BYD1_k127_5752931_2 two-component system sensor protein - - - 0.0000000000000000000000000000000000000000001158 163.0
BYD1_k127_5776674_0 Diguanylate cyclase phosphodiesterase with PAS PAC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005493 526.0
BYD1_k127_5776674_1 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K01497 - 3.5.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000004048 275.0
BYD1_k127_5776674_2 Protein of unknown function (DUF1214) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004744 262.0
BYD1_k127_5776674_3 acetylesterase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000116 264.0
BYD1_k127_5788888_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01907 - 6.2.1.16 6.93e-215 689.0
BYD1_k127_5788888_1 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 375.0
BYD1_k127_5788888_10 PFAM General substrate transporter K08195 - - 0.00000000000000000000000000000000000000000000151 183.0
BYD1_k127_5788888_11 Amidohydrolase - - - 0.00000000000000000000000000000000000000000003981 162.0
BYD1_k127_5788888_2 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008864 367.0
BYD1_k127_5788888_3 AraC-binding-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 349.0
BYD1_k127_5788888_4 Transcriptional regulator, gntR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 298.0
BYD1_k127_5788888_5 Gluconolactonase K01053 GO:0003674,GO:0003824,GO:0004341,GO:0016787,GO:0016788,GO:0052689 3.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002356 300.0
BYD1_k127_5788888_6 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000227 296.0
BYD1_k127_5788888_7 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001583 262.0
BYD1_k127_5788888_8 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000002182 246.0
BYD1_k127_5788888_9 amidohydrolase - - - 0.000000000000000000000000000000000000000000000001271 188.0
BYD1_k127_5797243_0 Major facilitator superfamily K08151 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000835 580.0
BYD1_k127_5797243_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 400.0
BYD1_k127_5797243_11 Small integral membrane protein - - - 0.0005555 44.0
BYD1_k127_5797243_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 365.0
BYD1_k127_5797243_3 CorA-like Mg2+ transporter protein K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 291.0
BYD1_k127_5797243_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000001189 183.0
BYD1_k127_5797243_5 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.0000000000000000000000000000000000000000002038 166.0
BYD1_k127_5797243_6 Y_Y_Y domain - - - 0.00000000000000000000000000000000000001728 160.0
BYD1_k127_5797243_7 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000001425 117.0
BYD1_k127_5797243_8 Thiol disulfide interchange protein K03673 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.000000000000000000000000005368 121.0
BYD1_k127_5797243_9 - - - - 0.00000000000000000000000006246 117.0
BYD1_k127_5806796_0 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000002204 203.0
BYD1_k127_5806796_1 Domain of unknown function (DUF4124) - - - 0.0000000000000002906 86.0
BYD1_k127_5806796_2 Signal transduction histidine kinase, nitrogen specific K07708 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0004721,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0016787,GO:0016788,GO:0016791,GO:0018106,GO:0018193,GO:0018202,GO:0019222,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042578,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051716,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 0.000000000000143 79.0
BYD1_k127_5816459_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008161 374.0
BYD1_k127_5816459_1 Histidine biosynthesis bifunctional protein HisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000005469 229.0
BYD1_k127_5816459_2 Tryptophan synthase alpha chain K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0033554,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0050896,GO:0051716,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.00000000000000000000007767 100.0
BYD1_k127_5816459_3 Lactonase, 7-bladed beta-propeller - - - 0.000000000000000001104 94.0
BYD1_k127_5816459_4 Belongs to the Orn Lys Arg decarboxylase class-II family K12526 - 2.7.2.4,4.1.1.20 0.0000000000002924 69.0
BYD1_k127_5884074_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1587.0
BYD1_k127_5884074_1 Amidohydrolase K14333,K15063 - 4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009436 399.0
BYD1_k127_5917120_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1104.0
BYD1_k127_5917120_1 mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005813 257.0
BYD1_k127_5917120_2 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000004485 175.0
BYD1_k127_5917120_3 diguanylate cyclase - - - 0.0000000000000000000000000002211 128.0
BYD1_k127_5917120_4 energy transducer activity K03832 - - 0.000005703 54.0
BYD1_k127_5917158_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 475.0
BYD1_k127_5917158_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 361.0
BYD1_k127_5917158_10 HDOD domain - - - 0.000000000000000000000000000000000000000000000007357 185.0
BYD1_k127_5917158_11 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.00000000000000000000004289 112.0
BYD1_k127_5917158_2 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 354.0
BYD1_k127_5917158_3 Belongs to the ParA family K04562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003176 307.0
BYD1_k127_5917158_4 this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 298.0
BYD1_k127_5917158_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007288 273.0
BYD1_k127_5917158_6 flagellar K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002696 264.0
BYD1_k127_5917158_7 Flagellar motor protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000005394 243.0
BYD1_k127_5917158_8 COG2202 FOG PAS PAC domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000005573 235.0
BYD1_k127_5917158_9 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000000000002547 187.0
BYD1_k127_5959709_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.113e-218 688.0
BYD1_k127_5959709_1 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 398.0
BYD1_k127_5959709_2 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 361.0
BYD1_k127_5959709_3 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000003655 142.0
BYD1_k127_5961841_0 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 522.0
BYD1_k127_5961841_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 GO:0003674,GO:0003824,GO:0004641,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 454.0
BYD1_k127_5961841_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 366.0
BYD1_k127_5961841_3 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 354.0
BYD1_k127_5961841_4 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000406 226.0
BYD1_k127_5961841_5 Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000000000007805 176.0
BYD1_k127_5961841_6 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000000001708 150.0
BYD1_k127_5961841_7 Protein of unknown function (DUF3108) - - - 0.000000000000000000007222 103.0
BYD1_k127_5961841_8 Protein of unknown function (DUF3108) - - - 0.0000000000000000001937 97.0
BYD1_k127_6014970_0 Belongs to the peptidase M16 family K07263 - - 1.499e-302 953.0
BYD1_k127_6014970_1 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 GO:0003674,GO:0003824,GO:0003849,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 520.0
BYD1_k127_6014970_2 Thioredoxin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002292 256.0
BYD1_k127_6014970_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0003273 53.0
BYD1_k127_603530_0 PLD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000005718 245.0
BYD1_k127_603530_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000001464 204.0
BYD1_k127_6053367_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1099.0
BYD1_k127_6053367_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009274 240.0
BYD1_k127_6102115_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 3.719e-201 636.0
BYD1_k127_6102115_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 483.0
BYD1_k127_6102115_2 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009348 306.0
BYD1_k127_6102115_3 arylsulfatase activity K01130 - 3.1.6.1 0.000000000000000000000000000000000002937 139.0
BYD1_k127_6123613_0 COG0348 Polyferredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000114 295.0
BYD1_k127_6123613_1 N-terminal domain of cytochrome oxidase-cbb3, FixP K00406 - - 0.000000000000000000000000000007953 123.0
BYD1_k127_6124806_0 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008505 299.0
BYD1_k127_6124806_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 300.0
BYD1_k127_6124806_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000003215 118.0
BYD1_k127_6124806_3 Yip1 domain - - - 0.000006379 50.0
BYD1_k127_6159006_0 COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases K01153 - 3.1.21.3 0.0 1928.0
BYD1_k127_6159006_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 453.0
BYD1_k127_6159006_2 COG0793 Periplasmic protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 456.0
BYD1_k127_6159006_3 Fic/DOC family - - - 0.0000000000000000000000000000000000000000000000000001282 188.0
BYD1_k127_6202372_0 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 9.101e-285 898.0
BYD1_k127_6202372_1 Involved in the biosynthesis of porphyrin-containing compound - GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 410.0
BYD1_k127_6202372_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 340.0
BYD1_k127_6202372_3 PFAM YicC-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002556 271.0
BYD1_k127_6202372_4 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000004616 230.0
BYD1_k127_6202372_5 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000006677 190.0
BYD1_k127_6202372_6 peptidase K07386 - - 0.00000000000000000000000000000000000000000001717 164.0
BYD1_k127_6202372_7 Ribosomal protein L31 - - - 0.000000000000000000000000000003046 121.0
BYD1_k127_6202372_8 Zn-dependent protease - - - 0.0000000006493 63.0
BYD1_k127_6208243_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 436.0
BYD1_k127_6208243_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 367.0
BYD1_k127_6208243_2 Dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 336.0
BYD1_k127_6208243_3 - - - - 0.0000000000000000000000000000000000000000000001166 179.0
BYD1_k127_6208243_4 Protein of unknown function (DUF1622) - - - 0.000000000000000000000000000000000000002693 150.0
BYD1_k127_6208243_5 PFAM AsmA family protein K07289 - - 0.0000000000000000000000000000000000005341 154.0
BYD1_k127_6208243_7 Histidine kinase - - - 0.0000000000000000000001394 100.0
BYD1_k127_6208243_8 membrane - - - 0.0000000000000000000004524 103.0
BYD1_k127_6224307_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 1.661e-208 681.0
BYD1_k127_6224307_1 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 529.0
BYD1_k127_6224307_2 Small-conductance mechanosensitive channel K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 299.0
BYD1_k127_6224307_3 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000001057 229.0
BYD1_k127_6224307_4 Phage tail sheath protein K06907 - - 0.000000000000000000000000000000000000000000000000000000000000001665 239.0
BYD1_k127_6224307_5 metal-dependent phosphoesterases (PHP family) K07053 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004534,GO:0004536,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006521,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008409,GO:0009987,GO:0010565,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016796,GO:0016895,GO:0016896,GO:0019222,GO:0030145,GO:0031323,GO:0033238,GO:0034641,GO:0035312,GO:0042578,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090357,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360 3.1.3.97 0.000000000000000000000000000000000000000000000000000000000001456 222.0
BYD1_k127_6224307_6 alpha beta - - - 0.0000000000000000000000000000000000002343 146.0
BYD1_k127_6224307_7 small protein containing a coiled-coil domain - - - 0.0000000000002662 72.0
BYD1_k127_6224307_8 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 K20881 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008477,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016798,GO:0016799,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0050483,GO:0050484 3.1.3.5 0.000000000001239 70.0
BYD1_k127_6234421_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 5.978e-221 705.0
BYD1_k127_6234421_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 8.813e-214 673.0
BYD1_k127_6234421_10 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000003798 211.0
BYD1_k127_6234421_11 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000105 181.0
BYD1_k127_6234421_12 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000001033 184.0
BYD1_k127_6234421_13 threonine efflux protein - - - 0.0000000000000000000000000000000000008052 158.0
BYD1_k127_6234421_14 Glu-tRNAGln amidotransferase C subunit - - - 0.00000000000000000000000001075 113.0
BYD1_k127_6234421_15 shape-determining protein K03571 - - 0.0002978 51.0
BYD1_k127_6234421_2 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 563.0
BYD1_k127_6234421_3 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 554.0
BYD1_k127_6234421_4 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 481.0
BYD1_k127_6234421_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 479.0
BYD1_k127_6234421_6 Peptidoglycan polymerase that is essential for cell wall elongation K05837 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008360,GO:0016020,GO:0022603,GO:0022604,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006992 377.0
BYD1_k127_6234421_7 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002003 277.0
BYD1_k127_6234421_8 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000002701 237.0
BYD1_k127_6234421_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000011 236.0
BYD1_k127_6249318_0 Nitric oxide reductase large subunit K04561 - 1.7.2.5 0.0 1199.0
BYD1_k127_6249318_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K15408 - 1.9.3.1 2.267e-214 681.0
BYD1_k127_6249318_10 MerR HTH family regulatory protein K18997 - - 0.0000000000000000005022 89.0
BYD1_k127_6249318_11 - - - - 0.0000000000008929 75.0
BYD1_k127_6249318_12 - - - - 0.0000004235 57.0
BYD1_k127_6249318_2 Dehydrogenase K17760 - 1.1.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004853 640.0
BYD1_k127_6249318_3 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 595.0
BYD1_k127_6249318_4 Alginate export - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 584.0
BYD1_k127_6249318_5 heat shock protein DnaJ K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 394.0
BYD1_k127_6249318_6 oxidoreductase FAD NAD(P)-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002585 267.0
BYD1_k127_6249318_7 Belongs to the UPF0311 family - - - 0.0000000000000000000000000000000000000000000000000000000000000001363 226.0
BYD1_k127_6249318_8 Group 1 truncated hemoglobin K06886 - - 0.000000000000000000000000000000000000000000001749 171.0
BYD1_k127_6254827_0 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 464.0
BYD1_k127_6254827_1 PepSY-associated TM region K00380 - 1.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007019 290.0
BYD1_k127_6254827_2 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001827 254.0
BYD1_k127_6254827_3 ATPase-coupled sulfate transmembrane transporter activity K02047 - - 0.0000000000007216 68.0
BYD1_k127_63014_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.327e-196 634.0
BYD1_k127_63014_1 Protein of unknown function (DUF1761) - - - 0.000000000000000000000003256 107.0
BYD1_k127_6330519_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 505.0
BYD1_k127_6330519_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 368.0
BYD1_k127_6330519_2 Transfers a succinyl group from succinyl-CoA to L- serine, forming succinyl-L-serine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.00000000000000000000000000000000002158 138.0
BYD1_k127_6355068_0 Glutathione S-transferase, C-terminal domain K00799 GO:0000302,GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0009636,GO:0010035,GO:0016740,GO:0016765,GO:0042221,GO:0042493,GO:0042542,GO:0044424,GO:0044464,GO:0046677,GO:0050896,GO:1901700 2.5.1.18 0.0000000000000000000000000000000000000000000000000003723 192.0
BYD1_k127_6355068_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.00000000000000000000000000000000000000000000000004476 199.0
BYD1_k127_6355068_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000001182 85.0
BYD1_k127_6365707_0 Peroxidase - - - 0.0 1239.0
BYD1_k127_6365707_1 Molecular chaperone. Has ATPase activity K04079 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006950,GO:0006974,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0042623,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 - 4.979e-238 751.0
BYD1_k127_6365707_10 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 396.0
BYD1_k127_6365707_11 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007676 293.0
BYD1_k127_6365707_12 Putative aminopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001244 286.0
BYD1_k127_6365707_13 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000001363 236.0
BYD1_k127_6365707_14 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000006302 245.0
BYD1_k127_6365707_15 Serine aminopeptidase, S33 K07018 - - 0.0000000000000000000000000000000000000000000000000001262 195.0
BYD1_k127_6365707_16 Peptide-methionine (R)-S-oxide reductase activity. It is involved in the biological process described with K07305 GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0005488,GO:0006928,GO:0006935,GO:0006996,GO:0007010,GO:0007015,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007423,GO:0008150,GO:0008152,GO:0008154,GO:0008270,GO:0008407,GO:0009605,GO:0009653,GO:0009887,GO:0009987,GO:0010927,GO:0014866,GO:0016043,GO:0016491,GO:0016667,GO:0016671,GO:0022008,GO:0022416,GO:0022607,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030154,GO:0030182,GO:0030239,GO:0030240,GO:0031032,GO:0031175,GO:0032501,GO:0032502,GO:0032989,GO:0032990,GO:0033743,GO:0034622,GO:0040011,GO:0042221,GO:0042330,GO:0042692,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0046872,GO:0046914,GO:0048468,GO:0048513,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048812,GO:0048856,GO:0048858,GO:0048869,GO:0050896,GO:0051146,GO:0051258,GO:0055001,GO:0055002,GO:0055114,GO:0061061,GO:0061564,GO:0065003,GO:0070925,GO:0071840,GO:0097435,GO:0097485,GO:0120036,GO:0120039 1.8.4.12 0.00000000000000000000000000000000000000000000000001195 186.0
BYD1_k127_6365707_17 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000001929 168.0
BYD1_k127_6365707_18 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000001862 142.0
BYD1_k127_6365707_19 Integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000002936 134.0
BYD1_k127_6365707_2 peptidyl-tyrosine sulfation - - - 4.223e-217 683.0
BYD1_k127_6365707_20 Belongs to the bacterial histone-like protein family - - - 0.0000000000000000000000000001784 119.0
BYD1_k127_6365707_3 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 597.0
BYD1_k127_6365707_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 509.0
BYD1_k127_6365707_5 twitching motility protein K02669 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003322 484.0
BYD1_k127_6365707_6 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 451.0
BYD1_k127_6365707_7 Lysin motif K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001915 465.0
BYD1_k127_6365707_8 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 432.0
BYD1_k127_6365707_9 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 407.0
BYD1_k127_6379336_0 protein conserved in bacteria K09800 GO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0097347 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006354 346.0
BYD1_k127_6379336_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002208 261.0
BYD1_k127_6379336_2 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000001922 229.0
BYD1_k127_6379336_3 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000000000000000003397 146.0
BYD1_k127_6395939_0 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 612.0
BYD1_k127_6395939_1 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000004449 226.0
BYD1_k127_646171_0 peptidase K01354 - 3.4.21.83 4.167e-278 876.0
BYD1_k127_646171_1 metal-dependent hydrolase of the TIM-barrel fold K03392,K10220 - 4.1.1.45,4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 509.0
BYD1_k127_646171_2 Oxidoreductase K10219 - 1.1.1.312 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 489.0
BYD1_k127_646171_3 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 326.0
BYD1_k127_6471571_0 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 574.0
BYD1_k127_6471571_1 Amidohydrolase K22213 - 4.1.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006499 282.0
BYD1_k127_6471571_2 Major Facilitator - - - 0.000000000000000000000000000000000000000000297 163.0
BYD1_k127_6471571_3 Metallo-beta-lactamase superfamily K05555 - - 0.0000000000000000000000000000000000000001768 165.0
BYD1_k127_6471571_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000003393 158.0
BYD1_k127_6471571_5 - - - - 0.0000000000000000004382 98.0
BYD1_k127_6471571_6 - - - - 0.000000000000000001586 94.0
BYD1_k127_6471571_7 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00003896 54.0
BYD1_k127_6601783_0 DNA topological change K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 533.0
BYD1_k127_6601783_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006147 429.0
BYD1_k127_6601783_10 Cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000000000001282 185.0
BYD1_k127_6601783_11 Putative member of DMT superfamily (DUF486) - - - 0.0000000000000000000000000000000000000000000000002862 178.0
BYD1_k127_6601783_12 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000008505 181.0
BYD1_k127_6601783_13 DNA glycosylase K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000001671 168.0
BYD1_k127_6601783_14 YceI-like domain - - - 0.00000000000000000000000000000000000000002824 164.0
BYD1_k127_6601783_15 Nuclear protein SET K07117 - - 0.00000000000000000000000000000000000000004212 159.0
BYD1_k127_6601783_16 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000566 126.0
BYD1_k127_6601783_17 Ankyrin repeats (many copies) - - - 0.0000000000000000000000003662 123.0
BYD1_k127_6601783_18 Oxalate decarboxylase - - - 0.0000000003495 62.0
BYD1_k127_6601783_2 CBS domain containing protein K07168 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 411.0
BYD1_k127_6601783_3 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 385.0
BYD1_k127_6601783_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 307.0
BYD1_k127_6601783_5 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 305.0
BYD1_k127_6601783_6 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007157 284.0
BYD1_k127_6601783_7 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008594 250.0
BYD1_k127_6601783_8 Belongs to the UPF0178 family K09768 - - 0.000000000000000000000000000000000000000000000000000000004289 203.0
BYD1_k127_6601783_9 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000000000000000000004171 188.0
BYD1_k127_6637479_0 Bacterial regulatory protein, Fis family K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009693 591.0
BYD1_k127_6637479_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 445.0
BYD1_k127_6637479_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 331.0
BYD1_k127_6637479_3 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000118 284.0
BYD1_k127_6637479_4 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000008724 203.0
BYD1_k127_6637479_5 protein conserved in bacteria K09973 - - 0.00000000000000000000000000000000000000000000000000000000672 213.0
BYD1_k127_6637479_6 -acetyltransferase K16704 GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747 2.3.1.210 0.000000000000000000000000000000000000000003053 160.0
BYD1_k127_6725053_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.12.99.6 8.893e-231 727.0
BYD1_k127_6725053_1 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 345.0
BYD1_k127_6725053_2 Hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000000009973 186.0
BYD1_k127_6725053_3 Hydrogenase expression formation protein K03605 - - 0.0000000000000000000001675 99.0
BYD1_k127_6725053_4 Di-glucose binding within endoplasmic reticulum - - - 0.000000000000003935 89.0
BYD1_k127_6725053_5 HupF/HypC family K04653 - - 0.0000000009344 66.0
BYD1_k127_6751951_0 type II secretion system protein E K02283 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 460.0
BYD1_k127_6751951_1 TIGRFAM Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 298.0
BYD1_k127_6751951_2 type II and III secretion system protein K02280 - - 0.000000000000000000000000000000000000000000000000000000000000002456 232.0
BYD1_k127_6751951_3 type II secretion system protein K12511 - - 0.00000000000000000000000000000000000000000001196 183.0
BYD1_k127_6751951_4 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000003337 150.0
BYD1_k127_6751951_5 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.000000000000000000000000000000000001156 152.0
BYD1_k127_6751951_6 PFAM Type II secretion system K12510 - - 0.000000000000000000000000000000002727 142.0
BYD1_k127_6751951_7 Belongs to the BolA IbaG family K05527 - - 0.000000000000000002624 95.0
BYD1_k127_6751951_8 Uncharacterized ACR, COG1430 K09005 - - 0.000000000001149 77.0
BYD1_k127_6751951_9 PFAM TadE family protein - - - 0.00000000001909 74.0
BYD1_k127_6774402_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 8.738e-265 829.0
BYD1_k127_6774402_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000001656 219.0
BYD1_k127_683920_0 glutamine synthetase K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005295 598.0
BYD1_k127_683920_1 Glutamine amidotransferase domain K22081 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005579 396.0
BYD1_k127_683920_2 Conserved region in glutamate synthase K22083 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 329.0
BYD1_k127_683920_3 glutamate synthase K22082 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000001539 221.0
BYD1_k127_683920_4 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.0000000000000000009509 93.0
BYD1_k127_683920_5 Sarcosine oxidase, gamma subunit family K00302 - 1.5.3.1 0.000002884 50.0
BYD1_k127_6846649_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1446.0
BYD1_k127_6846649_1 COG1472 Beta-glucosidase-related glycosidases K05349 - 3.2.1.21 2.112e-294 925.0
BYD1_k127_6846649_10 Domain of unknown function (DUF1820) - - - 0.0000000000000000000000000000000000001472 149.0
BYD1_k127_6846649_2 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 3.089e-227 726.0
BYD1_k127_6846649_3 Glycosyl hydrolases family 15 - - - 1.929e-208 664.0
BYD1_k127_6846649_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007435 581.0
BYD1_k127_6846649_5 ATPases associated with a variety of cellular activities K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003986 574.0
BYD1_k127_6846649_6 receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006477 528.0
BYD1_k127_6846649_7 Periplasmic binding protein domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 440.0
BYD1_k127_6846649_8 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 424.0
BYD1_k127_6846649_9 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000001595 180.0
BYD1_k127_6916968_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 578.0
BYD1_k127_6916968_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 405.0
BYD1_k127_693942_0 Voltage gated chloride channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001535 401.0
BYD1_k127_693942_1 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009128 281.0
BYD1_k127_693942_2 TipAS antibiotic-recognition domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000135 276.0
BYD1_k127_693942_3 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005253 244.0
BYD1_k127_693942_4 regulation of translation K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.0000000000000000000000000000000000000000000000000000000000000009827 228.0
BYD1_k127_693942_5 Bile acid K03453 - - 0.000000000000000000000000000000000000001936 158.0
BYD1_k127_693942_6 Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000001239 141.0
BYD1_k127_6969930_0 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 310.0
BYD1_k127_6969930_1 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K00567,K01247 - 2.1.1.63,3.2.2.21 0.000000000000000000000000000000000000000000000045 175.0
BYD1_k127_6969930_2 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.00000000000000000000000000009116 117.0
BYD1_k127_6969930_3 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.0000000000000000000001925 108.0
BYD1_k127_6969930_4 there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc K02913 - - 0.00000000000000003423 85.0
BYD1_k127_6969930_5 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.00000000000001411 78.0
BYD1_k127_6969930_7 Membrane - - - 0.000000009729 57.0
BYD1_k127_6969930_8 Antidote-toxin recognition MazE, bacterial antitoxin K18829 - - 0.00000004666 56.0
BYD1_k127_6988699_0 Putative methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 549.0
BYD1_k127_6988699_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000848 423.0
BYD1_k127_6988699_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 421.0
BYD1_k127_6988699_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309,K11103 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004521 308.0
BYD1_k127_6988699_4 Phosphatidylethanolamine-binding protein - - - 0.000000000000000000000000000001229 129.0
BYD1_k127_6988699_5 PFAM RNP-1 like RNA-binding protein - - - 0.00000000000000000000000000006527 122.0
BYD1_k127_6988699_6 Domain of Unknown Function with PDB structure (DUF3861) - - - 0.0000000000000000000000002981 108.0
BYD1_k127_6988699_7 PFAM Fatty acid desaturase - - - 0.000000000000000006038 85.0
BYD1_k127_7015992_0 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 555.0
BYD1_k127_7015992_1 bifunctional purine biosynthesis protein purh K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 0.00000000000000000000000000000000000000000000000000000000000001034 218.0
BYD1_k127_7015992_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000717 124.0
BYD1_k127_7015992_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000002291 71.0
BYD1_k127_7058375_0 Pectate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 317.0
BYD1_k127_7058375_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002655 240.0
BYD1_k127_7058375_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000002281 209.0
BYD1_k127_7058375_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000006932 207.0
BYD1_k127_7058375_4 methyltransferase - - - 0.0000000000001139 76.0
BYD1_k127_7092429_0 Phosphate acetyl butaryl transferase K00029 - 1.1.1.40 0.0 1064.0
BYD1_k127_7092429_1 selT selW selH selenoprotein K07401 - - 0.000000000000000000000000000000000000006185 147.0
BYD1_k127_7092429_2 Protein of unknown function (DUF3037) - - - 0.00000000000000000000000007081 108.0
BYD1_k127_7120719_0 DEAD DEAH box helicase domain protein K03654 - 3.6.4.12 4.313e-240 758.0
BYD1_k127_7120719_1 peptidase - - - 6.701e-212 672.0
BYD1_k127_7120719_2 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 474.0
BYD1_k127_7120719_3 enzyme related to lactoylglutathione lyase K06996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 335.0
BYD1_k127_7120719_4 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000003521 252.0
BYD1_k127_7120719_5 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000001548 216.0
BYD1_k127_7120719_6 alkaline phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000003548 152.0
BYD1_k127_7120719_7 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000007781 134.0
BYD1_k127_7120719_8 - - - - 0.000000000000000000000001942 108.0
BYD1_k127_7120719_9 spectrin binding K15502,K15503 - - 0.000000000000000002649 96.0
BYD1_k127_7152704_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 8.726e-200 629.0
BYD1_k127_7152704_1 Belongs to the MurCDEF family K01924 GO:0000166,GO:0000270,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034645,GO:0035639,GO:0036094,GO:0042546,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0046872,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 598.0
BYD1_k127_7152704_10 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008766,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0047480,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 390.0
BYD1_k127_7152704_11 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 381.0
BYD1_k127_7152704_12 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 342.0
BYD1_k127_7152704_13 abc transporter atp-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 342.0
BYD1_k127_7152704_14 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 336.0
BYD1_k127_7152704_15 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 327.0
BYD1_k127_7152704_16 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 322.0
BYD1_k127_7152704_17 Displays ATPase and GTPase activities K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 295.0
BYD1_k127_7152704_18 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 303.0
BYD1_k127_7152704_19 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000169 271.0
BYD1_k127_7152704_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 561.0
BYD1_k127_7152704_20 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003772 261.0
BYD1_k127_7152704_21 Stringent starvation protein A K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000493 242.0
BYD1_k127_7152704_22 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000001684 246.0
BYD1_k127_7152704_23 cytochrome K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000006331 232.0
BYD1_k127_7152704_24 PFAM LppC K07121 - - 0.0000000000000000000000000000000000000000000000000000005643 220.0
BYD1_k127_7152704_25 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000003206 157.0
BYD1_k127_7152704_26 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000002828 154.0
BYD1_k127_7152704_27 stringent starvation protein b K03600 - - 0.0000000000000000000000000000000006089 135.0
BYD1_k127_7152704_28 Sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000296 128.0
BYD1_k127_7152704_29 AFG1-like ATPase K06916 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032153,GO:0044424,GO:0044464,GO:0051301 - 0.00000000000000000000001378 106.0
BYD1_k127_7152704_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 563.0
BYD1_k127_7152704_30 - - - - 0.0000000000000000000004541 104.0
BYD1_k127_7152704_31 Belongs to the BolA IbaG family - - - 0.000000000000000000001124 104.0
BYD1_k127_7152704_32 Belongs to the UPF0102 family K07460 - - 0.000000000000000000009182 101.0
BYD1_k127_7152704_33 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000009234 88.0
BYD1_k127_7152704_34 Protein of unknown function (DUF3617) - - - 0.00006585 52.0
BYD1_k127_7152704_4 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 546.0
BYD1_k127_7152704_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003098 497.0
BYD1_k127_7152704_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 439.0
BYD1_k127_7152704_7 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 421.0
BYD1_k127_7152704_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 403.0
BYD1_k127_7152704_9 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 407.0
BYD1_k127_7183262_0 helicase activity - - - 1.803e-253 805.0
BYD1_k127_7183262_1 Protein involved in UDP-N-acetylmuramate dehydrogenase activity and amino sugar metabolic process K05797 - 1.17.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006615 549.0
BYD1_k127_7183262_2 Conserved region in glutamate synthase K22083 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 513.0
BYD1_k127_7183262_3 Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ K09767 - - 0.00000000000000000000000000000002105 136.0
BYD1_k127_7183262_4 Cytochrome c K00406 - - 0.00000000000000000005984 95.0
BYD1_k127_720332_0 chemotaxis protein K03407 - 2.7.13.3 5.225e-203 653.0
BYD1_k127_720332_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 433.0
BYD1_k127_720332_2 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000002728 256.0
BYD1_k127_720332_3 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000000000000000000001177 200.0
BYD1_k127_720332_4 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000000000000001516 170.0
BYD1_k127_720332_5 response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000000005887 174.0
BYD1_k127_720332_6 STAS domain - - - 0.000001881 57.0
BYD1_k127_720332_7 CobN/Magnesium Chelatase K02230 - 6.6.1.2 0.0008684 44.0
BYD1_k127_7209013_0 TonB dependent receptor K02014 - - 1.347e-305 962.0
BYD1_k127_7209013_1 alpha beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004452 450.0
BYD1_k127_7209013_2 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 363.0
BYD1_k127_7209013_3 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 333.0
BYD1_k127_7209013_4 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001523 271.0
BYD1_k127_7209013_5 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000759 122.0
BYD1_k127_7255781_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 4.059e-287 898.0
BYD1_k127_7255781_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.597e-246 764.0
BYD1_k127_7255781_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.000000000000000000000000000000000003519 143.0
BYD1_k127_7255781_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000001197 97.0
BYD1_k127_7255781_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000003634 68.0
BYD1_k127_7255781_2 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 8.547e-238 757.0
BYD1_k127_7255781_3 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 4.791e-212 670.0
BYD1_k127_7255781_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 3.684e-209 657.0
BYD1_k127_7255781_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003926 450.0
BYD1_k127_7255781_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001267 271.0
BYD1_k127_7255781_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000153 260.0
BYD1_k127_7255781_8 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000002368 249.0
BYD1_k127_7255781_9 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000002805 203.0
BYD1_k127_7284365_0 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000456 458.0
BYD1_k127_7284365_1 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 415.0
BYD1_k127_7284365_2 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007404 266.0
BYD1_k127_7284365_3 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000001683 179.0
BYD1_k127_732238_0 xanthine dehydrogenase activity - - - 0.0 1043.0
BYD1_k127_732238_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 442.0
BYD1_k127_732238_10 pfam nlp p60 K13695 - - 0.000000000000000000000000000000006109 133.0
BYD1_k127_732238_11 Histidine kinase - - - 0.00000000000000000000000000000009395 143.0
BYD1_k127_732238_12 Diguanylate cyclase - - - 0.00000001352 68.0
BYD1_k127_732238_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 426.0
BYD1_k127_732238_3 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 357.0
BYD1_k127_732238_4 ATP-binding region ATPase domain protein K07315,K13924 - 2.1.1.80,3.1.1.61,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 338.0
BYD1_k127_732238_5 NAD(P)H-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002568 260.0
BYD1_k127_732238_6 2Fe-2S -binding domain protein K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000008115 241.0
BYD1_k127_732238_7 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001178 246.0
BYD1_k127_732238_8 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000005131 244.0
BYD1_k127_732238_9 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000009758 183.0
BYD1_k127_7322856_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 394.0
BYD1_k127_7322856_1 Amidase K01457 - 3.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 291.0
BYD1_k127_7322856_2 positive regulation of macromolecule biosynthetic process K03973 - - 0.00000000000000000000000000000007137 132.0
BYD1_k127_7365599_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1032.0
BYD1_k127_7365599_1 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0019538,GO:0023052,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005563 570.0
BYD1_k127_7365599_10 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.0000000000000000000000000000001925 137.0
BYD1_k127_7365599_11 transcription elongation factor GreA GreB K06140 - - 0.0000000000000000000000000000102 125.0
BYD1_k127_7365599_12 Protein of unknown function (DUF1249) K09920 - - 0.0000000000000000000002672 107.0
BYD1_k127_7365599_13 OmpA-like transmembrane domain K10936 - - 0.000000000000000001535 93.0
BYD1_k127_7365599_14 Bacterial OB fold (BOF) protein - - - 0.000000000000000004237 90.0
BYD1_k127_7365599_15 peptidase - - - 0.00000002291 60.0
BYD1_k127_7365599_16 Transport of potassium into the cell K03549 - - 0.00000007699 56.0
BYD1_k127_7365599_17 - - - - 0.000005806 53.0
BYD1_k127_7365599_18 - - - - 0.0006633 47.0
BYD1_k127_7365599_2 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 488.0
BYD1_k127_7365599_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 400.0
BYD1_k127_7365599_4 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 380.0
BYD1_k127_7365599_5 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 375.0
BYD1_k127_7365599_6 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 301.0
BYD1_k127_7365599_7 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009365 263.0
BYD1_k127_7365599_8 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000003093 237.0
BYD1_k127_7365599_9 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000002494 207.0
BYD1_k127_7376524_0 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 329.0
BYD1_k127_7376524_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000002597 165.0
BYD1_k127_7376524_2 chemotaxis signal transduction protein K03408 - - 0.0000000000000000000000000000000000000145 152.0
BYD1_k127_7376524_3 NfeD-like C-terminal, partner-binding K07340 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000002059 141.0
BYD1_k127_7423720_0 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase K00162,K21417 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 462.0
BYD1_k127_7423720_1 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit K00161 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 394.0
BYD1_k127_7423720_2 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 373.0
BYD1_k127_7423720_3 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006443 285.0
BYD1_k127_7443117_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1166.0
BYD1_k127_748950_0 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 539.0
BYD1_k127_748950_2 Histidine kinase - - - 0.00000000000000000000000000006718 128.0
BYD1_k127_7506308_0 Oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009644 277.0
BYD1_k127_7506308_1 Dehydrogenase - - - 0.000000000000000007306 91.0
BYD1_k127_7506308_2 DoxX K16937 - 1.8.5.2 0.00000000000000006376 88.0
BYD1_k127_7508477_0 aminotransferase K14260 - 2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008323 426.0
BYD1_k127_7508477_1 electron transfer flavoprotein beta subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001313 248.0
BYD1_k127_7542213_0 Dipeptidyl carboxypeptidase K01284 - 3.4.15.5 2.676e-215 679.0
BYD1_k127_7542213_1 Protein of unknown function, DUF255 K01829 - 5.3.4.1 0.000000000006612 71.0
BYD1_k127_7549762_0 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 366.0
BYD1_k127_7549762_1 Belongs to the flagella basal body rod proteins family K02396 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005184 287.0
BYD1_k127_7549762_2 TIGRFAM Flagellar hook-associated protein 3 K02397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006084 262.0
BYD1_k127_7549762_3 PFAM Flagellar protein FlaG protein K06603 - - 0.0001568 48.0
BYD1_k127_7551569_0 COG4240 Predicted kinase K15918 - 2.7.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 319.0
BYD1_k127_7551569_1 ABC transporter K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 304.0
BYD1_k127_7551569_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 288.0
BYD1_k127_7559219_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 4.601e-209 654.0
BYD1_k127_7559219_1 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000001189 235.0
BYD1_k127_7559219_2 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.000000000000000000000000000000000000000000000009595 179.0
BYD1_k127_7579078_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 598.0
BYD1_k127_7579078_1 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 545.0
BYD1_k127_7579078_2 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 452.0
BYD1_k127_7600762_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 2.976e-296 927.0
BYD1_k127_7600762_1 Alcohol dehydrogenase GroES-like domain K00004 - 1.1.1.303,1.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 371.0
BYD1_k127_7600762_2 NADP oxidoreductase, coenzyme f420-dependent K06988 - 1.5.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000008171 274.0
BYD1_k127_7600762_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000174 203.0
BYD1_k127_7600762_4 membrane - - - 0.0000000000000000000000000000000004107 137.0
BYD1_k127_7607100_0 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 371.0
BYD1_k127_7607100_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 364.0
BYD1_k127_7607100_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001013 271.0
BYD1_k127_7607100_3 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000002178 258.0
BYD1_k127_7607100_4 RNA-binding protein K07574 - - 0.000000000000000000000002342 106.0
BYD1_k127_7666861_0 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000000000000000000000000000000002093 235.0
BYD1_k127_7666861_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000002455 109.0
BYD1_k127_7666861_2 Outer membrane protein beta-barrel domain - - - 0.000000000000000000002359 102.0
BYD1_k127_7666861_3 Tetratricopeptide repeat - - - 0.00000000009764 71.0
BYD1_k127_7666861_4 Ankyrin repeat K10380,K15502,K19626 - - 0.0000000005973 66.0
BYD1_k127_7666861_5 SnoaL-like domain - - - 0.000003317 57.0
BYD1_k127_7666861_6 Domain of unknown function (DUF5062) - - - 0.00002367 46.0
BYD1_k127_7679421_0 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004354 361.0
BYD1_k127_7679421_1 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005093 332.0
BYD1_k127_7679421_10 - - - - 0.0000000005207 62.0
BYD1_k127_7679421_11 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01586 - 4.1.1.20 0.00001458 51.0
BYD1_k127_7679421_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001051 286.0
BYD1_k127_7679421_3 Lactoylglutathione lyase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000003259 245.0
BYD1_k127_7679421_4 thiamine-containing compound biosynthetic process K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000003371 233.0
BYD1_k127_7679421_5 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000006895 204.0
BYD1_k127_7679421_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000006052 182.0
BYD1_k127_7679421_7 surface antigen (D15) K07278 - - 0.000000000000000000000000000000000000000001732 164.0
BYD1_k127_7679421_8 Acetyltransferase (isoleucine patch K00661 - 2.3.1.79 0.000000000000000000463 94.0
BYD1_k127_7679421_9 polysaccharide biosynthetic process - - - 0.000000000000000002626 98.0
BYD1_k127_7702348_0 Belongs to the peptidase S1B family - - - 2.295e-195 631.0
BYD1_k127_7702348_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 552.0
BYD1_k127_7702348_2 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 517.0
BYD1_k127_7702348_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 338.0
BYD1_k127_7702348_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000001321 237.0
BYD1_k127_7702348_5 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000000000000000000000000006348 185.0
BYD1_k127_7702348_6 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000000001931 183.0
BYD1_k127_7702348_7 KR domain - - - 0.0000000000000000000000000000000000000000003868 173.0
BYD1_k127_7702348_8 Reprolysin (M12B) family zinc metalloprotease - - - 0.00000000000000000000000000000000000000000284 172.0
BYD1_k127_7702348_9 KR domain - - - 0.000000000000000000000000000000000000004936 158.0
BYD1_k127_7832209_0 Belongs to the GMC oxidoreductase family - - - 4.045e-198 631.0
BYD1_k127_7832209_1 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 482.0
BYD1_k127_7832209_10 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 294.0
BYD1_k127_7832209_11 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000004178 230.0
BYD1_k127_7832209_12 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000002463 217.0
BYD1_k127_7832209_13 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000000000000000000513 204.0
BYD1_k127_7832209_14 SnoaL-like domain K06893 - - 0.0000000000000000000000000000000000000002973 153.0
BYD1_k127_7832209_15 Flavin containing amine oxidoreductase - - - 0.000000001542 61.0
BYD1_k127_7832209_2 Phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 444.0
BYD1_k127_7832209_3 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 431.0
BYD1_k127_7832209_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 401.0
BYD1_k127_7832209_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 366.0
BYD1_k127_7832209_6 MFS/sugar transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 349.0
BYD1_k127_7832209_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 323.0
BYD1_k127_7832209_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 305.0
BYD1_k127_7832209_9 unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005565 312.0
BYD1_k127_7842403_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 604.0
BYD1_k127_7842403_1 Phosphate starvation-inducible protein PhoH K06217 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 395.0
BYD1_k127_7842403_2 PFAM CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001347 282.0
BYD1_k127_7842403_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000001254 143.0
BYD1_k127_7842967_0 PFAM Type II secretion system protein E K02454 - - 1.316e-197 636.0
BYD1_k127_7842967_1 General secretion pathway protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000331 257.0
BYD1_k127_7842967_2 secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000003092 194.0
BYD1_k127_7846875_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.008e-229 724.0
BYD1_k127_7846875_1 RESPONSE REGULATOR receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009997 447.0
BYD1_k127_7846875_2 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002864 324.0
BYD1_k127_7846875_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000001081 213.0
BYD1_k127_7846875_4 - - - - 0.000000000000000000000000000000000000000000004231 178.0
BYD1_k127_7846875_5 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000000003412 61.0
BYD1_k127_7856508_0 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001643 362.0
BYD1_k127_7856508_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 306.0
BYD1_k127_7856508_2 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007771 262.0
BYD1_k127_7856508_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000002052 230.0
BYD1_k127_7856508_4 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.0000000000000000000000000000000000000000000000000000000000000009549 229.0
BYD1_k127_7856508_5 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000006487 204.0
BYD1_k127_7856508_6 Protein involved in transmembrane transport K02445,K03761,K03762,K08152,K08170,K08191,K08218 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0015291,GO:0015292,GO:0016020,GO:0022804,GO:0022857,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.00000000000000000000000000003598 131.0
BYD1_k127_7856508_7 Domain of unknown function (DUF4398) - - - 0.000000000000000000005016 100.0
BYD1_k127_7856508_8 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000007232 87.0
BYD1_k127_7864663_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 1.09e-218 693.0
BYD1_k127_7864663_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 364.0
BYD1_k127_7864663_2 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008236 332.0
BYD1_k127_7864663_3 Transport permease protein K01992 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 319.0
BYD1_k127_7864663_4 alpha/beta hydrolase fold K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 301.0
BYD1_k127_7864663_5 (ABC) transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000213 218.0
BYD1_k127_7864663_6 COG0671 Membrane-associated phospholipid phosphatase K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000001221 180.0
BYD1_k127_7864663_7 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.0000000000002885 77.0
BYD1_k127_7864663_8 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000001065 71.0
BYD1_k127_7890240_0 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000002021 244.0
BYD1_k127_7890240_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000005974 185.0
BYD1_k127_7890240_2 Rubrerythrin K06169 - - 0.00000000000000000000000000000000000000000000001164 178.0
BYD1_k127_7890240_3 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000007444 160.0
BYD1_k127_7890240_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000003788 157.0
BYD1_k127_7947622_0 Dehydrogenase K17760,K21676 - 1.1.9.1,1.17.2.2 6e-311 966.0
BYD1_k127_7947622_1 TIGRFAM FeS assembly protein SufB K09014 - - 4.218e-262 812.0
BYD1_k127_7947622_11 Flagellar regulatory protein FleQ - - - 0.0000000000000000000000000000000000000000000000000000009537 199.0
BYD1_k127_7947622_13 NifU-like N terminal domain K04488 - - 0.00000000000000000000000000000000000000000000000391 183.0
BYD1_k127_7947622_14 abc transporter, permease K09015 - - 0.00000000000000000000000000000000000000001747 170.0
BYD1_k127_7947622_16 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000008948 137.0
BYD1_k127_7947622_17 transcriptional regulator - - - 0.0000000000000000000000000000000007627 136.0
BYD1_k127_7947622_18 Phosphoglycerate mutase family K08296 - - 0.00000000000000001453 91.0
BYD1_k127_7947622_19 Phosphoglycerate mutase family K08296 - - 0.0000004819 59.0
BYD1_k127_7947622_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 521.0
BYD1_k127_7947622_3 fructose-bisphosphate aldolase K01623 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 405.0
BYD1_k127_7947622_4 ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 357.0
BYD1_k127_7947622_5 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 336.0
BYD1_k127_7947622_6 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 334.0
BYD1_k127_7947622_7 MASE1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002345 276.0
BYD1_k127_7947622_8 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001245 252.0
BYD1_k127_7947622_9 FeS assembly SUF system protein SufT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000333 241.0
BYD1_k127_7964391_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002117 546.0
BYD1_k127_7964391_1 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 478.0
BYD1_k127_7964391_2 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004035 354.0
BYD1_k127_7964391_3 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000000000000003902 198.0
BYD1_k127_7964391_4 GGDEF domain containing protein K21023 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000004647 203.0
BYD1_k127_7964391_5 auxin-activated signaling pathway K07088 - - 0.00000000000000000000000000000003177 137.0
BYD1_k127_7964391_6 Molybdenum ABC transporter K02020 - - 0.000000000000000001812 86.0
BYD1_k127_7964391_7 - - - - 0.0000001401 57.0
BYD1_k127_7964391_8 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.00007283 48.0
BYD1_k127_802038_0 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 503.0
BYD1_k127_802038_1 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 GO:0003674,GO:0005215,GO:0005372,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006833,GO:0006884,GO:0006950,GO:0006970,GO:0008150,GO:0008361,GO:0009628,GO:0009987,GO:0009992,GO:0015250,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0042044,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0050896,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 349.0
BYD1_k127_802038_2 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 293.0
BYD1_k127_802038_3 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009952 269.0
BYD1_k127_802038_4 N-acetylmuramyl L-alanine amydase K01447,K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043170,GO:0044424,GO:0044464,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000001472 241.0
BYD1_k127_8098170_0 Histidine ammonia-lyase K01745 - 4.3.1.3 4.33e-243 760.0
BYD1_k127_8098170_1 imidazolonepropionase K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008437 537.0
BYD1_k127_8098170_2 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006853 443.0
BYD1_k127_8098170_3 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 388.0
BYD1_k127_8133735_0 Mg-protoporphyrin IX monomethyl ester oxidative cyclase K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 593.0
BYD1_k127_8133735_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004142 226.0
BYD1_k127_8133735_2 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000662 205.0
BYD1_k127_8133735_3 - - - - 0.0000000000000000000000000000000000000000002835 164.0
BYD1_k127_8227712_0 Belongs to the IlvD Edd family K13875 - 4.2.1.25 3.438e-301 932.0
BYD1_k127_8227712_1 TonB-dependent Receptor Plug Domain K02014 - - 4.823e-250 791.0
BYD1_k127_8227712_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 432.0
BYD1_k127_8227712_11 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009655 437.0
BYD1_k127_8227712_12 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 428.0
BYD1_k127_8227712_13 helix_turn _helix lactose operon repressor K06145 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003205 395.0
BYD1_k127_8227712_14 Fumarylacetoacetate (FAA) hydrolase family K14259 - 4.2.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 381.0
BYD1_k127_8227712_15 MmgE/PrpD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 389.0
BYD1_k127_8227712_16 Major Facilitator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 371.0
BYD1_k127_8227712_17 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 353.0
BYD1_k127_8227712_18 MFS/sugar transport protein K03292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 317.0
BYD1_k127_8227712_19 Tetratricopeptide repeat - - - 0.000000000000000000000000000001921 140.0
BYD1_k127_8227712_2 Aldehyde dehydrogenase family K13877 - 1.2.1.26 9.733e-207 656.0
BYD1_k127_8227712_21 - - - - 0.0000000000000000008254 96.0
BYD1_k127_8227712_22 - - - - 0.00000000000000004523 85.0
BYD1_k127_8227712_3 Protein of unknown function (DUF1587) - - - 1.041e-206 669.0
BYD1_k127_8227712_4 Belongs to the glycosyl hydrolase 43 family K01198 - 3.2.1.37 1.983e-205 665.0
BYD1_k127_8227712_5 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 590.0
BYD1_k127_8227712_6 cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009127 577.0
BYD1_k127_8227712_7 of poly-gamma-glutamate biosynthesis (Capsule formation) K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007998 528.0
BYD1_k127_8227712_8 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002687 548.0
BYD1_k127_8227712_9 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007808 499.0
BYD1_k127_8264403_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 3.155e-205 650.0
BYD1_k127_8264403_1 Sporulation related domain - - - 0.0000000000000000000000001146 119.0
BYD1_k127_8264403_2 Sigma-70 region 2 K03088 - - 0.000006897 51.0
BYD1_k127_8313389_0 Dehydrogenase K17760,K21676 - 1.1.9.1,1.17.2.2 2.6e-322 1002.0
BYD1_k127_8313389_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 8.465e-317 992.0
BYD1_k127_8313389_2 alcohol dehydrogenase K00114 - 1.1.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 448.0
BYD1_k127_8313389_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 382.0
BYD1_k127_8313389_4 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008514 269.0
BYD1_k127_8313389_5 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000008313 190.0
BYD1_k127_8313389_6 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000000000000000000000000000000002201 176.0
BYD1_k127_8313389_7 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000216 165.0
BYD1_k127_8313389_8 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000003233 132.0
BYD1_k127_8313389_9 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000002512 125.0
BYD1_k127_838299_0 DHH family K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 572.0
BYD1_k127_838299_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 499.0
BYD1_k127_838299_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 445.0
BYD1_k127_838299_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 308.0
BYD1_k127_838299_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000007922 266.0
BYD1_k127_838299_5 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000007338 222.0
BYD1_k127_838299_6 protein conserved in bacteria - - - 0.0000000000000000000000000001978 120.0
BYD1_k127_838299_7 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000694 77.0
BYD1_k127_838299_8 protein conserved in bacteria - - - 0.00000002052 66.0
BYD1_k127_839391_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 612.0
BYD1_k127_839391_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 592.0
BYD1_k127_839391_10 BFD-like [2Fe-2S] binding domain K02192 - - 0.000000002875 59.0
BYD1_k127_839391_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 505.0
BYD1_k127_839391_3 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008467 478.0
BYD1_k127_839391_4 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008564 278.0
BYD1_k127_839391_5 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008784,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0019842,GO:0030170,GO:0030203,GO:0034645,GO:0036094,GO:0036361,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0048037,GO:0050662,GO:0070279,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003532 270.0
BYD1_k127_839391_6 Glutathione peroxidase K00432 - 1.11.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000531 250.0
BYD1_k127_839391_7 Iron-storage protein K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000000000000000000002766 239.0
BYD1_k127_839391_8 (FHA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000235 225.0
BYD1_k127_839391_9 Arylsulfatase - - - 0.000000000000000000000000000000000000001053 167.0
BYD1_k127_8438233_0 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 0.0 1339.0
BYD1_k127_8438233_1 PFAM Amidase K01457 - 3.5.1.54 0.00000000000000000000000000000000000000000000000002654 189.0
BYD1_k127_8466602_0 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001048 271.0
BYD1_k127_8466602_1 ankyrin repeat K15503 - - 0.0000000000000000000000000000000000000000000000000000000000000000003248 248.0
BYD1_k127_8466602_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000001858 104.0
BYD1_k127_8632773_0 Acyl-CoA dehydrogenase N terminal K20035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008013 584.0
BYD1_k127_8632773_1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 302.0
BYD1_k127_8632773_2 Putative restriction endonuclease - - - 0.0000000000000000000000000000000000000000000000006435 184.0
BYD1_k127_8632773_3 CHAT domain - - - 0.0000000000000000000000001226 123.0
BYD1_k127_8632773_4 LysR substrate binding domain - - - 0.0006667 44.0
BYD1_k127_8632888_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 406.0
BYD1_k127_8632888_1 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006566 261.0
BYD1_k127_8632888_2 histidine kinase, dimerisation and phosphoacceptor region K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000004988 211.0
BYD1_k127_8632888_3 response regulator - - - 0.000000000000003023 86.0
BYD1_k127_8632888_4 Protein of unknown function (DUF1328) - - - 0.000000000000008945 75.0
BYD1_k127_8632888_5 Bacterial protein of unknown function (DUF883) - - - 0.000000000008435 70.0
BYD1_k127_8636467_0 Sulfate permease family K03321 GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 - 5.494e-202 645.0
BYD1_k127_8636467_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009502 336.0
BYD1_k127_8636467_2 copG family - - - 0.00000000000000007926 82.0
BYD1_k127_8671029_0 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 365.0
BYD1_k127_8671029_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 GO:0003674,GO:0003824,GO:0003987,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006083,GO:0006084,GO:0006085,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006473,GO:0006476,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016054,GO:0016405,GO:0016787,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018193,GO:0018205,GO:0018394,GO:0019213,GO:0019427,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0033558,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034421,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0035601,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0043687,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0045733,GO:0046390,GO:0046395,GO:0046483,GO:0050218,GO:0051186,GO:0051188,GO:0055086,GO:0071616,GO:0071704,GO:0072329,GO:0072521,GO:0072522,GO:0090407,GO:0098732,GO:0140096,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 336.0
BYD1_k127_8671029_2 Exodeoxyribonuclease IX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004805 287.0
BYD1_k127_8671029_3 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002436 270.0
BYD1_k127_8671029_4 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001787 261.0
BYD1_k127_8671029_5 NMT1/THI5 like K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008925 263.0
BYD1_k127_8671029_6 COG0286 Type I restriction-modification system methyltransferase subunit K03427 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000008136 207.0
BYD1_k127_8671029_7 - - - - 0.000000000000000000000000000000002501 134.0
BYD1_k127_8671029_8 SnoaL-like domain - - - 0.0000000000000000000009651 103.0
BYD1_k127_8686160_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 3.69e-276 865.0
BYD1_k127_8686160_1 receptor K16090 - - 3.038e-248 788.0
BYD1_k127_8686160_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 542.0
BYD1_k127_8686160_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 488.0
BYD1_k127_8686160_4 pkhd-type hydroxylase K07336 GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0019725,GO:0030003,GO:0033554,GO:0042592,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0065007,GO:0065008,GO:0098771 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 364.0
BYD1_k127_8686160_5 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000006063 143.0
BYD1_k127_8686160_6 Periplasmic protein TonB links inner and outer membranes K03832 - - 0.00000000000001455 82.0
BYD1_k127_8687866_0 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 431.0
BYD1_k127_8687866_1 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000009776 241.0
BYD1_k127_8687866_2 GDSL-like Lipase/Acylhydrolase - - - 0.000000000000000000000000000000000000006911 153.0
BYD1_k127_8687866_3 'PFAM Alpha amylase, catalytic K00690 GO:0003674,GO:0003824,GO:0005975,GO:0005976,GO:0006066,GO:0006073,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016757,GO:0019400,GO:0019751,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0051472,GO:0071704,GO:1901615 2.4.1.7 0.00000000000000000002316 93.0
BYD1_k127_8721445_0 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 328.0
BYD1_k127_8721445_1 esterase K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000003111 257.0
BYD1_k127_8721445_2 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000006477 160.0
BYD1_k127_8744875_0 PFAM sugar transferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 419.0
BYD1_k127_8744875_1 glycosyl transferase, family 39 - - - 0.00000000000006638 81.0
BYD1_k127_8749729_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 500.0
BYD1_k127_8749729_1 basal body rod K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008205 383.0
BYD1_k127_8749729_2 Flagellar hook protein FlgE K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 336.0
BYD1_k127_8749729_3 flagellar basal body K02391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000138 286.0
BYD1_k127_8749729_4 flagellar hook-associated protein K02396 - - 0.000000000000000000000000000000000000000000000000000000000000007271 225.0
BYD1_k127_8749729_5 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.00000000000000000000000000000000000000000000000000000000001054 216.0
BYD1_k127_8749729_6 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000002894 204.0
BYD1_k127_876062_0 Acyclic terpene utilisation family protein AtuA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006552 479.0
BYD1_k127_876062_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 321.0
BYD1_k127_876062_2 2-methylcitrate dehydratase K01720 - 4.2.1.79 0.00000000000000000000000000000000000000000000000000000000000000000004933 235.0
BYD1_k127_880900_0 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006494 626.0
BYD1_k127_880900_1 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 451.0
BYD1_k127_880900_2 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007728 456.0
BYD1_k127_880900_3 pfam abc K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001315 289.0
BYD1_k127_880900_4 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000008097 226.0
BYD1_k127_880900_5 Transcriptional regulator - - - 0.00000000000000000000000000000000000005213 154.0
BYD1_k127_880900_6 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000004101 100.0
BYD1_k127_8813924_0 receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 334.0
BYD1_k127_8813924_1 regulator - - - 0.0000000000000000000000000000000000000000000000000000000000003928 219.0
BYD1_k127_8813924_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000003783 200.0
BYD1_k127_8831087_0 TIGRFAM RNA helicase, ATP-dependent DEAH box, HrpA type K03578 - 3.6.4.13 0.0 1484.0
BYD1_k127_8831087_1 ABC transporter transmembrane region K06147,K11085 - - 8.924e-204 650.0
BYD1_k127_8831087_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00322 - 1.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 591.0
BYD1_k127_8831087_3 glucose sorbosone - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 382.0
BYD1_k127_8831087_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001891 280.0
BYD1_k127_8831087_5 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003253 258.0
BYD1_k127_8831087_6 COG2199 FOG GGDEF domain K13590 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000005437 229.0
BYD1_k127_8831087_7 COG0724 RNA-binding proteins (RRM domain) - - - 0.0000000000000000000000000001551 121.0
BYD1_k127_8831087_8 - - - - 0.00000000000000000005805 94.0
BYD1_k127_8831087_9 Cytochrome b - - - 0.000000000612 63.0
BYD1_k127_8840955_0 Tryptophan halogenase - - - 9.184e-286 885.0
BYD1_k127_8840955_1 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 598.0
BYD1_k127_8840955_2 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 435.0
BYD1_k127_8840955_3 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006259 248.0
BYD1_k127_8840955_4 SapC - - - 0.000000000000000000000000000000000000000000000000000000000000000006754 238.0
BYD1_k127_885050_0 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 346.0
BYD1_k127_885050_1 FAD dependent oxidoreductase K06954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005072 274.0
BYD1_k127_885050_2 3-beta hydroxysteroid dehydrogenase isomerase K21271,K22320 - 1.1.1.394,1.1.1.412 0.0009183 48.0
BYD1_k127_8874786_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1186.0
BYD1_k127_8874786_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.0 1052.0
BYD1_k127_8874786_10 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 - 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 347.0
BYD1_k127_8874786_11 Threonine aldolase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006473 327.0
BYD1_k127_8874786_12 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002144 314.0
BYD1_k127_8874786_13 Preprotein translocase subunit TatD K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008458 310.0
BYD1_k127_8874786_14 Histidine kinase K07637 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 307.0
BYD1_k127_8874786_15 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005263 296.0
BYD1_k127_8874786_16 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000009321 261.0
BYD1_k127_8874786_17 PFAM MazG nucleotide pyrophosphohydrolase K04765 - 3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001313 261.0
BYD1_k127_8874786_18 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000001008 219.0
BYD1_k127_8874786_19 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008444,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016772,GO:0016780,GO:0017169,GO:0019637,GO:0031224,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044425,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000001406 218.0
BYD1_k127_8874786_2 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 5.307e-274 866.0
BYD1_k127_8874786_20 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quinone pool of the respiratory chain K17247 - - 0.0000000000000000000000000000000000000000000000000000003481 206.0
BYD1_k127_8874786_21 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000001312 194.0
BYD1_k127_8874786_22 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.000000000000000000000000000000000000000000000002166 178.0
BYD1_k127_8874786_23 WLM domain K07043 - - 0.000000000000000000000000000000000005787 149.0
BYD1_k127_8874786_24 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase - - - 0.000000000000000000000000000000000106 142.0
BYD1_k127_8874786_25 Hydrolase - - - 0.00000000000000000000001446 110.0
BYD1_k127_8874786_26 outer membrane lipoprotein - - - 0.0000000000000000002341 95.0
BYD1_k127_8874786_27 - - - - 0.0000000000000001806 87.0
BYD1_k127_8874786_28 protein acetylation - - - 0.00000000000001955 81.0
BYD1_k127_8874786_29 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.00000000002995 74.0
BYD1_k127_8874786_3 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 3.079e-197 628.0
BYD1_k127_8874786_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 601.0
BYD1_k127_8874786_5 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 513.0
BYD1_k127_8874786_6 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005387 520.0
BYD1_k127_8874786_7 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004565 434.0
BYD1_k127_8874786_8 Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide K07147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 390.0
BYD1_k127_8874786_9 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 GO:0002097,GO:0002098,GO:0002143,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 390.0
BYD1_k127_8895481_0 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000000006687 233.0
BYD1_k127_8895481_1 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000254 211.0
BYD1_k127_8895481_2 Penicillinase repressor - - - 0.000000000000000000000000000000000003242 140.0
BYD1_k127_8895481_3 BlaR1 peptidase M56 - - - 0.00000000000000000000000000000000009676 154.0
BYD1_k127_8895481_4 protein conserved in bacteria - - - 0.0000002157 54.0
BYD1_k127_8955810_0 DNA-binding domain of Proline dehydrogenase K13821 - 1.2.1.88,1.5.5.2 0.0 1129.0
BYD1_k127_8955810_1 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 294.0
BYD1_k127_8955810_2 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006545 247.0
BYD1_k127_8955810_3 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B - - - 0.00000000000000000000000000000000000000000000000000000000000005425 216.0
BYD1_k127_8955810_4 peptidyl-prolyl cis-trans isomerase K03767 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000005023 207.0
BYD1_k127_8955810_5 SnoaL-like domain - - - 0.0000000000000000000000000000001016 135.0
BYD1_k127_8961382_0 MotA/TolQ/ExbB proton channel family - - - 0.0000000000000000000000000000000000000000000000000000000000000001489 226.0
BYD1_k127_8961382_1 - - - - 0.000000000000000000000000000000000000000000000000000000000009893 218.0
BYD1_k127_8961382_2 Biopolymer transport protein ExbD/TolR - - - 0.000000000000000000000000000000000006855 145.0
BYD1_k127_8961382_3 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000000000000000000001541 138.0
BYD1_k127_8961382_4 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 0.00000000000000000000000000000006734 129.0
BYD1_k127_8961382_5 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000002664 123.0
BYD1_k127_9026887_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 1.511e-224 698.0
BYD1_k127_9026887_1 Membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 368.0
BYD1_k127_9026887_2 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000000000002125 158.0
BYD1_k127_9033877_0 ABC transporter transmembrane region K06147 - - 1.155e-266 835.0
BYD1_k127_9033877_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00260,K00261 - 1.4.1.2,1.4.1.3 5.745e-210 661.0
BYD1_k127_9033877_10 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000005685 179.0
BYD1_k127_9033877_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000003808 181.0
BYD1_k127_9033877_12 Protein of unknown function (DUF3313) - - - 0.0000000000000000000000000000000000001494 153.0
BYD1_k127_9033877_13 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.000000000000000000000000000000002825 138.0
BYD1_k127_9033877_14 - - - - 0.00000000000000000000000008961 113.0
BYD1_k127_9033877_15 - - - - 0.000000000000000000000001346 113.0
BYD1_k127_9033877_16 lytic transglycosylase activity K03194 - - 0.00000000000002506 86.0
BYD1_k127_9033877_17 Regulatory protein, FmdB family - - - 0.000001232 54.0
BYD1_k127_9033877_18 - - - - 0.0005638 48.0
BYD1_k127_9033877_2 RecA-superfamily ATPases implicated in signal transduction K08482 - - 1.284e-206 653.0
BYD1_k127_9033877_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 464.0
BYD1_k127_9033877_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 367.0
BYD1_k127_9033877_5 cyclopropane-fatty-acyl-phospholipid synthase K00574,K18827 - 2.1.1.294,2.1.1.79,2.7.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 348.0
BYD1_k127_9033877_6 Belongs to the 3-hydroxyisobutyrate dehydrogenase family K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000008699 260.0
BYD1_k127_9033877_7 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000008121 207.0
BYD1_k127_9033877_8 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000003816 196.0
BYD1_k127_9033877_9 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000000116 182.0
BYD1_k127_90432_1 DNA topological change - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009218 496.0
BYD1_k127_90432_10 Zn-dependent - - - 0.0000000000000000000000000000000001691 145.0
BYD1_k127_90432_11 belongs to the aldehyde dehydrogenase family - - - 0.0000000000000000000000000000917 118.0
BYD1_k127_90432_12 SnoaL-like polyketide cyclase - - - 0.00000000000000000000000001935 113.0
BYD1_k127_90432_13 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000000005683 93.0
BYD1_k127_90432_14 - - - - 0.000000000000007206 83.0
BYD1_k127_90432_15 - - - - 0.00000000004725 72.0
BYD1_k127_90432_2 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 425.0
BYD1_k127_90432_3 Protein of unknown function (DUF1552) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 351.0
BYD1_k127_90432_4 transglutaminase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003012 313.0
BYD1_k127_90432_5 - - - - 0.000000000000000000000000000000000000000000000000000000000008192 222.0
BYD1_k127_90432_6 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000008669 194.0
BYD1_k127_90432_7 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000001441 179.0
BYD1_k127_90432_8 COG3764 Sortase (surface protein transpeptidase) - - - 0.0000000000000000000000000000000000000005865 159.0
BYD1_k127_90432_9 ankyrin repeat K15503 - - 0.000000000000000000000000000000000002039 157.0
BYD1_k127_9067952_0 Glucuronate isomerase K01812 - 5.3.1.12 3.344e-261 810.0
BYD1_k127_9067952_1 Mandelate racemase muconate lactonizing enzyme K08323 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0008150,GO:0008152,GO:0008927,GO:0009056,GO:0016052,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044238,GO:0046872,GO:0071704,GO:1901575 4.2.1.8 1.037e-252 781.0
BYD1_k127_9067952_2 Mannitol dehydrogenase K00040,K00045 - 1.1.1.57,1.1.1.67 3.996e-208 658.0
BYD1_k127_9067952_3 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 516.0
BYD1_k127_9067952_4 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 462.0
BYD1_k127_9068411_0 COG3104 Dipeptide tripeptide permease K03305 - - 1.241e-288 897.0
BYD1_k127_9068411_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 510.0
BYD1_k127_9068411_2 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 451.0
BYD1_k127_9068411_3 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002202 273.0
BYD1_k127_9068411_4 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000005608 198.0
BYD1_k127_9068411_5 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0000166,GO:0000900,GO:0002161,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004812,GO:0004829,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006417,GO:0006418,GO:0006435,GO:0006446,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0017076,GO:0017148,GO:0019222,GO:0019538,GO:0019752,GO:0030371,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032553,GO:0032555,GO:0032559,GO:0034248,GO:0034249,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045182,GO:0045947,GO:0046483,GO:0046872,GO:0046914,GO:0048027,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090079,GO:0090304,GO:0097159,GO:0097367,GO:0106074,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112,GO:2000113 6.1.1.3 0.0000002157 54.0
BYD1_k127_9224495_0 Dehydrogenase K00114,K17760,K22473 - 1.1.2.8,1.1.5.5,1.1.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009345 509.0
BYD1_k127_9224495_1 PQQ-like domain K00114 - 1.1.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 456.0
BYD1_k127_9224495_2 Cytochrome C oxidase, cbb3-type, subunit III K00406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006554 258.0
BYD1_k127_9229627_0 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 465.0
BYD1_k127_9229627_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 321.0
BYD1_k127_9229627_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000005529 141.0
BYD1_k127_9229627_11 Peptidoglycan-binding domain 1 protein - - - 0.0000000000000000000008998 102.0
BYD1_k127_9229627_12 MacB-like periplasmic core domain K02004 - - 0.0000000000000000002308 98.0
BYD1_k127_9229627_13 Lysin motif - - - 0.0000000000000002976 81.0
BYD1_k127_9229627_2 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 307.0
BYD1_k127_9229627_3 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K00375,K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 316.0
BYD1_k127_9229627_4 HlyD family secretion protein K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 299.0
BYD1_k127_9229627_5 SMP-30/Gluconolaconase/LRE-like region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001055 271.0
BYD1_k127_9229627_6 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000002017 252.0
BYD1_k127_9229627_7 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001423 264.0
BYD1_k127_9229627_8 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain - - - 0.00000000000000000000000000000000000000001497 159.0
BYD1_k127_9229627_9 PAP2 superfamily K09474 - 3.1.3.2 0.00000000000000000000000000000000000006844 152.0
BYD1_k127_9270208_0 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 390.0
BYD1_k127_9270208_1 Phospholipase D. Active site motifs. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006107 248.0
BYD1_k127_9270208_2 Bacterial OB fold (BOF) protein - - - 0.0000000000000000000000009309 108.0
BYD1_k127_9273310_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 8.663e-266 842.0
BYD1_k127_9273310_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 GO:0000166,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 473.0
BYD1_k127_9273310_2 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000005009 188.0
BYD1_k127_9273310_3 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000004783 162.0
BYD1_k127_9273310_4 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000000000000000000000005308 136.0
BYD1_k127_9319332_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1570.0
BYD1_k127_9319332_1 ABC transporter - - - 6.989e-274 852.0
BYD1_k127_9319332_10 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.000000000000000000000000000000000000000000000000000000000000000000008671 244.0
BYD1_k127_9319332_11 Riboflavin synthase K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000002953 223.0
BYD1_k127_9319332_12 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000002992 213.0
BYD1_k127_9319332_13 helix_turn_helix multiple antibiotic resistance protein K15974 - - 0.000000000000000000005789 99.0
BYD1_k127_9319332_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.196e-204 643.0
BYD1_k127_9319332_3 Major facilitator superfamily K03446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 594.0
BYD1_k127_9319332_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 414.0
BYD1_k127_9319332_5 Histone deacetylase domain K04768 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 370.0
BYD1_k127_9319332_6 COG1566 Multidrug resistance efflux pump K03543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 375.0
BYD1_k127_9319332_7 efflux transporter outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 357.0
BYD1_k127_9319332_8 of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006815 333.0
BYD1_k127_9319332_9 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 292.0
BYD1_k127_9331122_0 Belongs to the glycosyl hydrolase 28 family - - - 4.129e-203 646.0
BYD1_k127_9351538_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 2.655e-284 910.0
BYD1_k127_9351538_1 Dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 611.0
BYD1_k127_9351538_2 PFAM NADH flavin oxidoreductase NADH oxidase K10680 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 318.0
BYD1_k127_9351538_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005692 254.0
BYD1_k127_9351538_4 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000001939 131.0
BYD1_k127_9351538_5 Cytochrome c - - - 0.00000000000000000000000000106 117.0
BYD1_k127_9351538_6 - - - - 0.000000000000000000000005095 112.0
BYD1_k127_9399522_0 COG0665 Glycine D-amino acid oxidases (deaminating) K09471 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 467.0
BYD1_k127_9399522_1 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 426.0
BYD1_k127_9399522_2 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 382.0
BYD1_k127_9399522_3 Peptidase C26 K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 301.0
BYD1_k127_9399522_4 S1/P1 Nuclease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 299.0
BYD1_k127_9399522_5 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000002847 262.0
BYD1_k127_9465139_0 TonB-dependent receptor plug K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 386.0
BYD1_k127_9465139_1 COG3201 Nicotinamide mononucleotide transporter K03811 - - 0.0000000000000000000000000000005667 131.0
BYD1_k127_9465139_2 ferredoxin K04755 - - 0.000000000000000000000005012 106.0
BYD1_k127_9465139_3 YKOF-related Family - - - 0.0000000000000000002228 90.0
BYD1_k127_9465139_4 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.00000000000000003162 86.0
BYD1_k127_9465139_5 Phosphotransferase enzyme family K07251 - 2.7.1.89 0.00000000000008454 84.0
BYD1_k127_9480066_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365 - 2.4.1.129,3.4.16.4 1.933e-212 684.0
BYD1_k127_9480066_1 NAD(P) transhydrogenase subunit alpha K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000005182 212.0
BYD1_k127_9490178_0 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000001755 117.0
BYD1_k127_9490178_1 Domain of unknown function (DUF4252) - - - 0.0000000000000000000000224 111.0
BYD1_k127_9490178_2 the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription K03088 - - 0.000000001919 63.0
BYD1_k127_9515157_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 569.0
BYD1_k127_9515157_1 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000142 273.0
BYD1_k127_9519827_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001121 289.0
BYD1_k127_9519827_1 COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog K03088 - - 0.00000000000000000000000000000000002543 141.0
BYD1_k127_9519827_2 Yip1 domain - - - 0.00000000001411 76.0
BYD1_k127_9519827_3 - - - - 0.00000000211 66.0
BYD1_k127_9526382_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 304.0
BYD1_k127_9526382_1 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000003657 119.0
BYD1_k127_9526382_2 Outer membrane protein beta-barrel domain - - - 0.00000001466 64.0
BYD1_k127_9578570_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 307.0
BYD1_k127_9578570_1 PFAM Extradiol ring-cleavage dioxygenase, class III K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 282.0
BYD1_k127_9578570_2 Dehydrogenase - - - 0.00000000000000000000000000000000000003651 153.0
BYD1_k127_9578570_3 - - - - 0.000000000000000001646 101.0
BYD1_k127_9578570_4 - - - - 0.00000000000002696 87.0
BYD1_k127_961390_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 1.933e-246 773.0
BYD1_k127_961390_1 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 349.0
BYD1_k127_961390_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 330.0
BYD1_k127_961390_3 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000007769 262.0
BYD1_k127_961390_4 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000002794 234.0
BYD1_k127_961390_5 salt-induced outer membrane protein K07283 - - 0.000000000000000000000000000000000000000000005767 173.0
BYD1_k127_961390_6 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000406 124.0
BYD1_k127_961390_7 Outer membrane protein beta-barrel domain - - - 0.0000000000000002681 87.0
BYD1_k127_961390_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000004655 57.0
BYD1_k127_980480_0 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 472.0
BYD1_k127_980480_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000052 447.0
BYD1_k127_980480_2 epimerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008765 355.0
BYD1_k127_980480_3 Permease, YjgP YjgQ family K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 357.0
BYD1_k127_980480_4 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 330.0
BYD1_k127_980480_5 lipid kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000012 308.0
BYD1_k127_980480_6 Permease, YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001214 280.0
BYD1_k127_980480_7 Histidine triad (HIT) protein - - - 0.000000000000000000000000000000000000000000000000000754 189.0
BYD1_k127_980480_8 Kdo2-lipid A biosynthetic process K02517,K20543,K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.241,2.3.1.265 0.00000000000000000000000000000000000000000000000004374 182.0
BYD1_k127_980480_9 - - - - 0.00000000000000000000000000000000000000006603 166.0
BYD1_k127_982416_0 NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 290.0
BYD1_k127_982416_1 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008840,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000006442 259.0
BYD1_k127_982416_2 LysR substrate binding domain - - - 0.00000004255 55.0
BYD1_k127_9867019_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 7.436e-215 686.0
BYD1_k127_9867019_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 598.0
BYD1_k127_9867019_2 PFAM short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 421.0
BYD1_k127_9867019_3 DNA topological change K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 306.0
BYD1_k127_9867019_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems - - - 0.0000000000000000000000000000000000000000000003401 174.0
BYD1_k127_9867019_5 - - - - 0.00000000000000000000000000006708 128.0
BYD1_k127_9867019_6 - - - - 0.0000000000000000000000009685 115.0
BYD1_k127_9867019_7 Flagellar Motor Protein K11892 - - 0.000000000000000000001573 103.0
BYD1_k127_9867019_8 - - - - 0.00000000000000001674 92.0
BYD1_k127_9867019_9 META domain - - - 0.0000000003785 70.0
BYD1_k127_9898874_0 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007231 576.0
BYD1_k127_9898874_1 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04099 - 1.13.11.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 459.0
BYD1_k127_9898874_2 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 419.0
BYD1_k127_9898874_3 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 373.0
BYD1_k127_9898874_4 Lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003983 286.0
BYD1_k127_9898874_5 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000528 281.0
BYD1_k127_9898874_6 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.000000000000000000000000000000000000000000000000000000000000000000004467 244.0
BYD1_k127_9898874_7 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000000000003656 192.0
BYD1_k127_9898874_8 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0003674,GO:0003824,GO:0004000,GO:0005488,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008251,GO:0008270,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0046914,GO:0052717,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.0000000000000000000000000000000000000000000239 166.0
BYD1_k127_9898874_9 - - - - 0.00005664 53.0
BYD1_k127_9912474_0 Alpha/beta-hydrolase family N-terminus - - - 6.781e-227 715.0
BYD1_k127_9912474_1 Domain of unknown function (DUF3520) K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 578.0
BYD1_k127_9912474_2 META domain K03668 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002617 284.0
BYD1_k127_99960_0 GAF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 471.0
BYD1_k127_99960_1 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 331.0
BYD1_k127_99960_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 291.0
BYD1_k127_99960_3 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001162 287.0
BYD1_k127_99960_4 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0008150,GO:0008152,GO:0009056,GO:0016491,GO:0044464,GO:0055114,GO:0071704,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000001636 235.0
BYD1_k127_99960_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000000866 231.0
BYD1_k127_99960_6 Belongs to the pseudouridine synthase RsuA family K06178 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.22 0.0000000000000000000000000000000000000005735 162.0
BYD1_k127_99960_7 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.000000000000000004149 85.0