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Overview

ID MAG00018
Name BYD1_bin.28
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Acidobacteriota
Class Blastocatellia
Order Pyrinomonadales
Family Pyrinomonadaceae
Genus PSRF01
Species
Assembly information
Completeness (%) 71.85
Contamination (%) 3.81
GC content (%) 58.0
N50 (bp) 11,106
Genome size (bp) 3,182,077

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2606

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10025171_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 578.0
BYD1_k127_10025171_1 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 535.0
BYD1_k127_10025171_2 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003019 493.0
BYD1_k127_10025171_3 Aminotransferase class-V K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 351.0
BYD1_k127_10025171_4 Tricorn protease homolog - - - 0.00000000000000000000000000000000000000000000000002286 181.0
BYD1_k127_10025171_5 amino acid - - - 0.0000000000000000000000000000000000000004746 159.0
BYD1_k127_10025171_6 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000001413 150.0
BYD1_k127_10025171_7 Redoxin - - - 0.000000000000000000000000000000000504 136.0
BYD1_k127_10025171_8 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000003417 107.0
BYD1_k127_10025171_9 periplasmic or secreted lipoprotein K04065 - - 0.00001081 57.0
BYD1_k127_10026522_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 418.0
BYD1_k127_10026522_1 Electron transfer flavoprotein FAD-binding domain K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 358.0
BYD1_k127_10026522_2 Copper binding periplasmic protein CusF K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004515 270.0
BYD1_k127_10026522_3 Electron transfer flavoprotein domain K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002398 266.0
BYD1_k127_10026522_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 0.000000000000000000000000000004236 131.0
BYD1_k127_10048892_1 Domain of unknown function (DUF5117) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 417.0
BYD1_k127_10048892_3 lipoprotein localization to outer membrane K02004 - - 0.00000000000000000000000000000000000000000000003014 193.0
BYD1_k127_10048892_4 Forkhead associated domain - - - 0.0000000000000000000000000000000003688 149.0
BYD1_k127_10048892_5 Ferredoxin - - - 0.000000000000000000000000001021 116.0
BYD1_k127_10049671_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 423.0
BYD1_k127_10049671_1 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005935 261.0
BYD1_k127_10049671_2 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000025 184.0
BYD1_k127_10051408_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 338.0
BYD1_k127_10051408_1 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070042,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.193 0.00000000000000000000000000000001074 133.0
BYD1_k127_10051408_2 - - - - 0.0001799 49.0
BYD1_k127_10069167_0 ADP-glyceromanno-heptose 6-epimerase activity K01709 - 4.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006074 521.0
BYD1_k127_10069167_1 PFAM ABC transporter related K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 511.0
BYD1_k127_10069167_2 Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000017 409.0
BYD1_k127_10069167_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005574 409.0
BYD1_k127_10069167_4 Parallel beta-helix repeats - - - 0.00000000000000000000000000000000000000000000000000000000009331 215.0
BYD1_k127_10069167_5 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.0000000000000000000000000000000000000000000000000000002876 203.0
BYD1_k127_10069167_6 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000005073 184.0
BYD1_k127_10069167_7 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000149 183.0
BYD1_k127_10069167_8 HYR domain - - - 0.00000000000000000000000000000000000000000000001686 195.0
BYD1_k127_10069167_9 Putative zinc binding domain - - - 0.0000000000000000000000000000001432 127.0
BYD1_k127_10079835_0 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 6.585e-276 860.0
BYD1_k127_10079835_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000002709 142.0
BYD1_k127_10079835_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00007475 49.0
BYD1_k127_10079835_3 Domain of unknown function (DUF4349) - - - 0.0003229 52.0
BYD1_k127_10084261_0 Putative cyclase K07130 - 3.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006863 288.0
BYD1_k127_10084261_1 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001021 282.0
BYD1_k127_10084261_2 Tricorn protease homolog - - - 0.000000000000000000000000000000000000000000000000000000000000000001325 231.0
BYD1_k127_10084261_3 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000001171 231.0
BYD1_k127_10084261_4 - - - - 0.000224 48.0
BYD1_k127_10112322_0 efflux transmembrane transporter activity K02004 - - 2.635e-207 671.0
BYD1_k127_10112322_1 COG0577 ABC-type antimicrobial peptide transport system permease component - - - 5.972e-197 641.0
BYD1_k127_10112322_2 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004278 535.0
BYD1_k127_10112322_3 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005567 525.0
BYD1_k127_10112322_4 MacB-like periplasmic core domain - - - 0.00000000000000000005474 92.0
BYD1_k127_10189982_0 Phosphoenolpyruvate carboxykinase K01610 - 4.1.1.49 4.516e-212 673.0
BYD1_k127_10189982_1 SpoVR like protein K06415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 565.0
BYD1_k127_10189982_10 - - - - 0.000000000000000000000000000000000000000000000004044 180.0
BYD1_k127_10189982_11 HIT domain K02503 - - 0.0000000000000000000000000000000000000005848 151.0
BYD1_k127_10189982_12 Ferredoxin K00529,K04755,K08952,K08953,K08954,K15765 GO:0005575,GO:0005622,GO:0005623,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044464,GO:0046858 1.18.1.3 0.0000000000000000000000000000004308 136.0
BYD1_k127_10189982_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 482.0
BYD1_k127_10189982_3 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 286.0
BYD1_k127_10189982_4 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002244 290.0
BYD1_k127_10189982_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005162 235.0
BYD1_k127_10189982_6 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000003151 230.0
BYD1_k127_10189982_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000002316 225.0
BYD1_k127_10189982_8 Belongs to the UPF0229 family K09786 - - 0.000000000000000000000000000000000000000000000000000000000004152 211.0
BYD1_k127_10189982_9 spore germination - - - 0.00000000000000000000000000000000000000000000000000000000002022 218.0
BYD1_k127_1024230_0 Putative glucoamylase K13688 - - 0.0 2698.0
BYD1_k127_1024230_1 FecR protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 473.0
BYD1_k127_1024230_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009334 437.0
BYD1_k127_1024230_3 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 320.0
BYD1_k127_1024230_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000008376 168.0
BYD1_k127_1024230_5 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000002181 153.0
BYD1_k127_1024230_6 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000124 59.0
BYD1_k127_10286840_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 413.0
BYD1_k127_10286840_1 Is also involved in protein lipoylation via its role as an octanoyl lipoyl carrier protein intermediate K02437 GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 - 0.0000000000000000000000000000000000000000000009739 168.0
BYD1_k127_10286840_2 Domain of unknown function (DUF4349) - - - 0.0001936 52.0
BYD1_k127_1030478_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 515.0
BYD1_k127_1030478_1 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000005125 260.0
BYD1_k127_10304795_0 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 542.0
BYD1_k127_10304795_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit K00333 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 509.0
BYD1_k127_10304795_10 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000001034 211.0
BYD1_k127_10304795_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000001601 158.0
BYD1_k127_10304795_12 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000508 163.0
BYD1_k127_10304795_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000006626 160.0
BYD1_k127_10304795_14 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000001244 132.0
BYD1_k127_10304795_15 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000002219 118.0
BYD1_k127_10304795_16 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L K00340 - 1.6.5.3 0.0000000000000000000000000001121 120.0
BYD1_k127_10304795_17 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.0000000000000000000004587 105.0
BYD1_k127_10304795_18 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000001147 75.0
BYD1_k127_10304795_19 function for this protein is to guide the assembly of the membrane sector of the ATPase enzyme complex K02116 - - 0.00000003408 57.0
BYD1_k127_10304795_2 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 501.0
BYD1_k127_10304795_20 Protein of unknown function (DUF1385) - - - 0.0000003193 53.0
BYD1_k127_10304795_3 Proton-conducting membrane transporter K00343 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 417.0
BYD1_k127_10304795_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 326.0
BYD1_k127_10304795_5 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 310.0
BYD1_k127_10304795_6 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001285 263.0
BYD1_k127_10304795_7 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000002665 267.0
BYD1_k127_10304795_8 Radical SAM superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005507 250.0
BYD1_k127_10304795_9 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000002989 223.0
BYD1_k127_10306457_0 Pfam:HxxPF_rpt - - - 0.0 4323.0
BYD1_k127_10306457_1 D-alanine [D-alanyl carrier protein] ligase activity K16130 - - 0.0 1997.0
BYD1_k127_10306457_10 TIGRFAM amino acid adenylation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 487.0
BYD1_k127_10306457_11 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 432.0
BYD1_k127_10306457_12 PFAM Taurine catabolism dioxygenase TauD TfdA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 433.0
BYD1_k127_10306457_13 Ornithine cyclodeaminase mu-crystallin family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 411.0
BYD1_k127_10306457_14 - - - - 0.000000000000000000000000000000226 134.0
BYD1_k127_10306457_15 MbtH-like protein K05375 - - 0.0000000000000000000000000003061 117.0
BYD1_k127_10306457_16 - - - - 0.0001409 46.0
BYD1_k127_10306457_2 AMP-binding enzyme C-terminal domain - - - 0.0 1753.0
BYD1_k127_10306457_3 Ketoacyl-synthetase C-terminal extension - - - 0.0 1572.0
BYD1_k127_10306457_4 Non-ribosomal peptide synthetase modules and related - - - 0.0 1513.0
BYD1_k127_10306457_5 COGs COG1020 Non-ribosomal peptide synthetase modules and related protein - - - 0.0 1458.0
BYD1_k127_10306457_6 Non-ribosomal peptide synthetase modules and related proteins - - - 0.0 1248.0
BYD1_k127_10306457_7 efflux transmembrane transporter activity K02004 - - 1.258e-204 663.0
BYD1_k127_10306457_8 ABC transporter transmembrane region K06160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 572.0
BYD1_k127_10306457_9 PFAM Lantibiotic dehydratase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008478 582.0
BYD1_k127_103402_0 Peptidase S46 - - - 4.866e-235 746.0
BYD1_k127_103402_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 8.994e-218 700.0
BYD1_k127_103402_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 609.0
BYD1_k127_103402_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 417.0
BYD1_k127_103402_4 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 388.0
BYD1_k127_103402_5 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000001661 193.0
BYD1_k127_103402_6 - - - - 0.00000000000000000000000000000000000000000000000009282 192.0
BYD1_k127_103402_7 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K00760,K04075 - 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000000000289 168.0
BYD1_k127_103402_8 COG0500 SAM-dependent methyltransferases - - - 0.0000000003832 69.0
BYD1_k127_10411635_0 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000000000000000000000000000001358 198.0
BYD1_k127_10411635_1 hmm pf07719 - - - 0.0000008202 59.0
BYD1_k127_1043518_0 Dipeptidyl peptidase IV (DPP IV) K01278 - 3.4.14.5 3.865e-216 688.0
BYD1_k127_1043518_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 547.0
BYD1_k127_1043518_2 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008424 275.0
BYD1_k127_1043518_3 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002586 241.0
BYD1_k127_1043518_4 ABC-2 type transporter K01992,K09690,K09691,K09692 - - 0.000000000000000000000000000000000000000000000000000000000005926 216.0
BYD1_k127_1043518_5 DUF218 domain - - - 0.0000000000000000000000000000000000000000000000005681 193.0
BYD1_k127_1043518_6 - - - - 0.000000000000000000000000000009937 134.0
BYD1_k127_1043518_7 protein import - - - 0.000000000000003285 90.0
BYD1_k127_10479695_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000009887 233.0
BYD1_k127_10479695_1 DNA-templated transcription, initiation - - - 0.000000000000000000000000000000000000000000000000000000001571 215.0
BYD1_k127_10479695_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000001277 171.0
BYD1_k127_10479695_3 Haem-binding domain - - - 0.0000000000000000000000000000000000211 140.0
BYD1_k127_10479695_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000001741 129.0
BYD1_k127_10479695_5 Belongs to the phosphoglycerate mutase family K15634 - 5.4.2.12 0.00000000000000000000000000001598 125.0
BYD1_k127_10479695_6 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000004535 93.0
BYD1_k127_10479695_7 Tfp pilus assembly protein FimV - - - 0.00000000000543 74.0
BYD1_k127_10479695_8 Putative porin - - - 0.00000002217 66.0
BYD1_k127_10479695_9 peptidyl-tyrosine sulfation - - - 0.0003359 49.0
BYD1_k127_10511667_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 522.0
BYD1_k127_10511667_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 394.0
BYD1_k127_10511667_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000003422 232.0
BYD1_k127_10511667_3 Yqey-like protein K09117 - - 0.0000000000000000000000000000000001431 139.0
BYD1_k127_10511667_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000001913 137.0
BYD1_k127_10519849_0 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 431.0
BYD1_k127_10519849_1 Ribonuclease E/G family K08301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005533 417.0
BYD1_k127_10519849_10 Protein of unknown function (DUF983) - - - 0.0000002339 57.0
BYD1_k127_10519849_2 ABC transporter, transmembrane K18889 - - 0.0000000000000000000000000000000000000000000000000000000004559 217.0
BYD1_k127_10519849_3 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000005384 208.0
BYD1_k127_10519849_4 Putative cyclase K07130 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000002156 200.0
BYD1_k127_10519849_5 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000001046 190.0
BYD1_k127_10519849_6 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000000000647 166.0
BYD1_k127_10519849_8 enzyme binding K00567,K07443 - 2.1.1.63 0.0000000000000000000003584 100.0
BYD1_k127_10519849_9 PFAM thioesterase superfamily protein - - - 0.0000000000000001097 85.0
BYD1_k127_10546541_0 peptidyl-tyrosine sulfation - - - 0.000000000000000000000001519 113.0
BYD1_k127_10554515_0 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 339.0
BYD1_k127_10554515_1 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008121 289.0
BYD1_k127_10554515_2 Phosphoribosyl transferase domain K00760,K15780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000268 228.0
BYD1_k127_10554515_3 Phosphotransfer between the C1 and C5 carbon atoms of pentose K01839 - 5.4.2.7 0.00000000000000000000000000000000000000000000000000001347 193.0
BYD1_k127_10554515_4 5'-nucleotidase K01081 - 3.1.3.5 0.000000000000000003984 95.0
BYD1_k127_10554515_5 Psort location Cytoplasmic, score 8.96 K01808 - 5.3.1.6 0.0000000000001823 77.0
BYD1_k127_10590040_0 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00239 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114 1.3.5.1,1.3.5.4 9.205e-273 852.0
BYD1_k127_10590040_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 465.0
BYD1_k127_10590040_2 Penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 473.0
BYD1_k127_10590040_3 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 340.0
BYD1_k127_10590040_4 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 317.0
BYD1_k127_10590040_5 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 300.0
BYD1_k127_10590040_6 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.00000000000000000000000000000000000000000000001728 178.0
BYD1_k127_10590040_7 Protein of unknown function (DUF1810) - - - 0.00000000000000000000000000000000000000001926 154.0
BYD1_k127_10590040_8 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000002974 136.0
BYD1_k127_10590040_9 Smr domain - - - 0.00000000000000000000000000006646 120.0
BYD1_k127_1067221_0 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 394.0
BYD1_k127_1067221_1 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001863 304.0
BYD1_k127_1067221_2 PFAM Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005084 265.0
BYD1_k127_1067221_3 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000006716 212.0
BYD1_k127_1067221_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000001739 159.0
BYD1_k127_1067221_5 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000007449 109.0
BYD1_k127_10691888_0 Glycosyl hydrolase family 3 C terminal domain K05349 - 3.2.1.21 1.036e-314 989.0
BYD1_k127_10691888_1 Pkd domain containing protein K07407 - 3.2.1.22 1e-224 710.0
BYD1_k127_10691888_10 Melibiase K07407 GO:0003674,GO:0003824,GO:0004553,GO:0004557,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0009056,GO:0015925,GO:0016137,GO:0016139,GO:0016787,GO:0016798,GO:0042802,GO:0042803,GO:0046983,GO:0071704,GO:1901135,GO:1901136,GO:1901575,GO:1901657,GO:1901658 3.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000001352 262.0
BYD1_k127_10691888_11 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000003065 227.0
BYD1_k127_10691888_12 Domain of unknown function (DUF3390) K18929 - - 0.00000000000000000000000000000001064 135.0
BYD1_k127_10691888_13 Alpha galactosidase A K07407 - 3.2.1.22 0.00000000000000003222 97.0
BYD1_k127_10691888_14 Cupredoxin-like domain - - - 0.000002471 56.0
BYD1_k127_10691888_2 protocatechuate 3,4-dioxygenase activity - - - 5.694e-222 731.0
BYD1_k127_10691888_3 PFAM glycoside hydrolase, family 29 K01206 - 3.2.1.51 1.228e-196 622.0
BYD1_k127_10691888_4 PFAM Alcohol dehydrogenase GroES-like domain K00008,K00060 - 1.1.1.103,1.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 476.0
BYD1_k127_10691888_5 Alginate lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005964 352.0
BYD1_k127_10691888_6 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01707 - 4.2.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 314.0
BYD1_k127_10691888_7 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000785 308.0
BYD1_k127_10691888_8 Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001364 272.0
BYD1_k127_10691888_9 Amidohydrolase K07046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003212 266.0
BYD1_k127_1070449_0 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 467.0
BYD1_k127_1070449_1 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003723 386.0
BYD1_k127_1070449_2 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000000000002706 194.0
BYD1_k127_1070449_3 Capsular exopolysaccharide family K08252 - 2.7.10.1 0.000000000000000000000000000000000000000006751 163.0
BYD1_k127_1070449_4 PFAM Polysaccharide export protein K01991 - - 0.0000000000000001231 90.0
BYD1_k127_1070449_5 Tetratricopeptide repeat - - - 0.0008948 51.0
BYD1_k127_10705919_0 Dienelactone hydrolase family - - - 2.129e-280 878.0
BYD1_k127_10705919_1 Amidase K01426 - 3.5.1.4 7.884e-199 632.0
BYD1_k127_10705919_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 441.0
BYD1_k127_10705919_3 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 439.0
BYD1_k127_10705919_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 421.0
BYD1_k127_10705919_5 Belongs to the UPF0102 family K07460 - - 0.000000000000000004605 89.0
BYD1_k127_10705919_6 Preprotein translocase subunit K03210 - - 0.000000000000002931 79.0
BYD1_k127_10705919_7 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.000000000006771 73.0
BYD1_k127_10705919_8 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000009656 67.0
BYD1_k127_10809522_0 Multicopper oxidase - - - 0.0 1272.0
BYD1_k127_10809522_1 dna ligase - - - 1.949e-220 692.0
BYD1_k127_10809522_10 Beta-lactamase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001155 244.0
BYD1_k127_10809522_11 Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway K08967 - 1.13.11.53,1.13.11.54 0.000000000000000000000000000000000000000000000000000000000000000000127 234.0
BYD1_k127_10809522_12 Bifunctional enzyme that catalyzes the enolization of 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK-MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK- MTPene) K09880 - 3.1.3.77 0.0000000000000000000000000000000000000000000000000000000000000002457 232.0
BYD1_k127_10809522_13 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000009509 216.0
BYD1_k127_10809522_14 Catalyzes the dehydration of methylthioribulose-1- phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1- phosphate (DK-MTP-1-P) K08964 - 4.2.1.109 0.00000000000000000000000000000000000000000000000000000000009718 211.0
BYD1_k127_10809522_15 SCO1/SenC K07152,K08976 - - 0.00000000000000000000000000000000000000000000000000000001266 203.0
BYD1_k127_10809522_17 SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000001681 186.0
BYD1_k127_10809522_18 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000001151 145.0
BYD1_k127_10809522_19 peptidyl-tyrosine sulfation K03217,K06872 - - 0.00000000000000000000000000000000008546 146.0
BYD1_k127_10809522_2 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007917 566.0
BYD1_k127_10809522_20 Plasmid stabilization system - - - 0.00000000000000000000000000000001751 130.0
BYD1_k127_10809522_21 -domain-containing protein - - - 0.0000000000000000000000002291 121.0
BYD1_k127_10809522_22 Tetratricopeptide repeat - - - 0.000000000000000000003763 94.0
BYD1_k127_10809522_24 InterPro IPR007367 - - - 0.0000000003441 64.0
BYD1_k127_10809522_25 Transposase IS200 like K07491 - - 0.0000002557 61.0
BYD1_k127_10809522_26 Biopolymer transport protein ExbD/TolR K03559,K03560 - - 0.000001692 57.0
BYD1_k127_10809522_27 Transposase IS200 like K07491 - - 0.0001465 53.0
BYD1_k127_10809522_28 Helix-turn-helix XRE-family like proteins - - - 0.0002001 48.0
BYD1_k127_10809522_3 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 543.0
BYD1_k127_10809522_4 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 507.0
BYD1_k127_10809522_5 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 447.0
BYD1_k127_10809522_6 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002957 388.0
BYD1_k127_10809522_7 H( )-stimulated, divalent metal cation uptake system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 386.0
BYD1_k127_10809522_8 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 373.0
BYD1_k127_10809522_9 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005504 309.0
BYD1_k127_10812186_0 Hydrolase, TatD family K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003313 252.0
BYD1_k127_10812186_1 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000006991 209.0
BYD1_k127_10812186_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000253 108.0
BYD1_k127_10812224_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000816 527.0
BYD1_k127_10812224_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000001551 72.0
BYD1_k127_10825090_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.158e-222 696.0
BYD1_k127_10825090_1 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 616.0
BYD1_k127_10825090_10 Nucleotidyl transferase K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004038 316.0
BYD1_k127_10825090_11 Belongs to the GHMP kinase family. GalK subfamily K00849 - 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008695 301.0
BYD1_k127_10825090_12 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 286.0
BYD1_k127_10825090_13 CO dehydrogenase flavoprotein C-terminal domain K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002455 290.0
BYD1_k127_10825090_14 FCD K05799 - - 0.0000000000000000000000000000000000000000000000000000000000000000001112 238.0
BYD1_k127_10825090_15 2Fe-2S -binding K13483 - - 0.00000000000000000000000000000000000000000000000000000000005104 211.0
BYD1_k127_10825090_16 Protein of unknown function (DUF1326) - - - 0.0000000000000002295 87.0
BYD1_k127_10825090_17 - - - - 0.0002039 47.0
BYD1_k127_10825090_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 491.0
BYD1_k127_10825090_3 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K11177 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 490.0
BYD1_k127_10825090_4 Zn-dependent protease with chaperone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 455.0
BYD1_k127_10825090_5 Glycosyl Hydrolase Family 88 K15532 - 3.2.1.172 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 431.0
BYD1_k127_10825090_6 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000629 395.0
BYD1_k127_10825090_7 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 385.0
BYD1_k127_10825090_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 349.0
BYD1_k127_10825090_9 Transcriptional regulator, LysR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004267 332.0
BYD1_k127_10903058_0 Belongs to the glycosyl hydrolase 28 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 582.0
BYD1_k127_10903058_1 Pectic acid lyase - - - 0.0000000000000000000000005744 106.0
BYD1_k127_11004290_0 FtsX-like permease family - - - 8.789e-253 807.0
BYD1_k127_11004290_1 MacB-like periplasmic core domain - - - 4.582e-211 682.0
BYD1_k127_11004290_10 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 560.0
BYD1_k127_11004290_11 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 507.0
BYD1_k127_11004290_12 Peptidase M56 - - - 0.0000000000000000000000000000000000000118 159.0
BYD1_k127_11004290_13 Belongs to the UPF0312 family - - - 0.000000000000000000000000002514 117.0
BYD1_k127_11004290_14 MacB-like periplasmic core domain - - - 0.000000000000000000002276 97.0
BYD1_k127_11004290_2 efflux transmembrane transporter activity K02004 - - 3.206e-205 667.0
BYD1_k127_11004290_3 efflux transmembrane transporter activity K02004 - - 5.475e-203 658.0
BYD1_k127_11004290_4 efflux transmembrane transporter activity - - - 7.447e-201 653.0
BYD1_k127_11004290_5 efflux transmembrane transporter activity - - - 2.938e-200 652.0
BYD1_k127_11004290_6 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009592 600.0
BYD1_k127_11004290_7 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000555 597.0
BYD1_k127_11004290_8 FtsX-like permease family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006716 593.0
BYD1_k127_11004290_9 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 566.0
BYD1_k127_11019158_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K04105,K04110 - 6.2.1.25,6.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 399.0
BYD1_k127_11019158_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003302 303.0
BYD1_k127_11019158_2 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000001714 162.0
BYD1_k127_11019158_3 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.00000000000000000000000000000000000000000007043 162.0
BYD1_k127_11019158_4 PFAM thioesterase superfamily - - - 0.00000000000000001773 82.0
BYD1_k127_1102796_0 Carboxypeptidase regulatory-like domain - - - 5.917e-235 766.0
BYD1_k127_1102796_1 Glutamine amidotransferases class-II K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007345 563.0
BYD1_k127_1102796_10 domain protein K02238 - - 0.00000000000000000000000000000000000000000000000000003418 202.0
BYD1_k127_1102796_11 RDD family - - - 0.000000000000000000000000000000000000000001594 166.0
BYD1_k127_1102796_12 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000002762 152.0
BYD1_k127_1102796_13 Cytochrome c - - - 0.000000000000003182 80.0
BYD1_k127_1102796_2 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 465.0
BYD1_k127_1102796_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006437,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007924 457.0
BYD1_k127_1102796_4 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 395.0
BYD1_k127_1102796_5 PFAM Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 317.0
BYD1_k127_1102796_6 Formyl transferase K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000008253 247.0
BYD1_k127_1102796_7 dihydrolipoamide dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000003023 245.0
BYD1_k127_1102796_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000009847 240.0
BYD1_k127_1102796_9 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000001801 235.0
BYD1_k127_11036341_0 Tricorn protease homolog K08676 - - 0.0 1265.0
BYD1_k127_11036341_1 Major Facilitator Superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 295.0
BYD1_k127_11036341_2 SMART PDZ DHR GLGF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001284 231.0
BYD1_k127_11036341_3 Protein of unknown function (DUF2911) - - - 0.00000000000000000000000000000000000000000000002432 183.0
BYD1_k127_11036341_4 triphosphatase activity - - - 0.00000000000000000000000009203 115.0
BYD1_k127_11036341_5 DoxX K15977 - - 0.000000000000000000000009787 106.0
BYD1_k127_11036341_6 Protein of unknown function (DUF3298) - - - 0.00000000000000000002528 104.0
BYD1_k127_11038943_0 Aromatic amino acid lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 379.0
BYD1_k127_11038943_1 Predicted integral membrane protein (DUF2270) - - - 0.000000000000000000000000000000000000000000000000000000000000002102 230.0
BYD1_k127_11038943_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000000000000002647 166.0
BYD1_k127_11038943_4 - - - - 0.00000000000000152 86.0
BYD1_k127_11038943_5 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000009711 65.0
BYD1_k127_11038943_6 Resolvase, N terminal domain - - - 0.000000001429 59.0
BYD1_k127_11048639_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 479.0
BYD1_k127_11048639_1 Penicillinase repressor - - - 0.0000000000000000000002264 102.0
BYD1_k127_11048639_2 Belongs to the peptidase M48B family - - - 0.000000000000000000028 100.0
BYD1_k127_1105560_0 Cytochrome c - - - 1.661e-315 1005.0
BYD1_k127_1105560_1 Domain of unknown function (DUF3479) K03403 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 534.0
BYD1_k127_1105560_10 Cytochrome b(C-terminal)/b6/petD - - - 0.0001268 44.0
BYD1_k127_1105560_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 463.0
BYD1_k127_1105560_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008616 392.0
BYD1_k127_1105560_4 CobN/Magnesium Chelatase K03403 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0009507,GO:0009526,GO:0009528,GO:0009532,GO:0009536,GO:0009570,GO:0009706,GO:0009941,GO:0010007,GO:0016020,GO:0016851,GO:0016874,GO:0019866,GO:0031090,GO:0031967,GO:0031969,GO:0031975,GO:0032991,GO:0042170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0051002,GO:0051003,GO:1902494 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 316.0
BYD1_k127_1105560_5 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009401 304.0
BYD1_k127_1105560_6 oxidoreductase activity, acting on diphenols and related substances as donors K02636,K03886 - 1.10.9.1 0.0000000000000000000000000000000000000000000000000000000000000000009466 233.0
BYD1_k127_1105560_7 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000000000005804 198.0
BYD1_k127_1105560_8 Cytochrome oxidase assembly protein K02259,K03110 - - 0.00000000000000000000000000000000000000000000355 175.0
BYD1_k127_1105560_9 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins - - - 0.000000000001875 70.0
BYD1_k127_1112962_0 efflux transmembrane transporter activity K02004 - - 4.123e-199 647.0
BYD1_k127_1112962_1 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 295.0
BYD1_k127_1112962_2 Belongs to the UPF0312 family - - - 0.000000000000000000000002873 109.0
BYD1_k127_1112962_3 FtsX-like permease family - - - 0.000000000000000002917 86.0
BYD1_k127_1112962_4 - - - - 0.0000000000636 74.0
BYD1_k127_11143456_0 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 541.0
BYD1_k127_11143456_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000005164 173.0
BYD1_k127_11143456_2 efflux transmembrane transporter activity K02004 - - 0.000000049 59.0
BYD1_k127_11159174_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1151.0
BYD1_k127_11159174_1 PFAM phosphate acetyl butaryl transferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007268 314.0
BYD1_k127_11172134_0 PFAM Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003594 468.0
BYD1_k127_11172134_1 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 296.0
BYD1_k127_11172134_2 membrane - - - 0.00000000000000000000000000000001499 129.0
BYD1_k127_11172134_3 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000803 92.0
BYD1_k127_11187852_0 SMART ATPase, AAA type, core K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 328.0
BYD1_k127_11187852_1 Histidine-specific methyltransferase, SAM-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 295.0
BYD1_k127_11187852_2 PFAM Binding-protein-dependent transport system inner membrane component K05846 - - 0.00000000000000000000000001446 117.0
BYD1_k127_11187852_3 VWA domain containing CoxE-like protein - - - 0.00000000245 69.0
BYD1_k127_11202318_0 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001848 589.0
BYD1_k127_11202318_1 amino acid transport K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 517.0
BYD1_k127_11202318_2 Fungal family of unknown function (DUF1776) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 412.0
BYD1_k127_11202318_3 Cys/Met metabolism PLP-dependent enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 362.0
BYD1_k127_11202318_4 eRF1 domain 3 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008246 290.0
BYD1_k127_11202318_5 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004567,GO:0005975,GO:0005976,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010412,GO:0015923,GO:0016052,GO:0016787,GO:0016798,GO:0016985,GO:0016998,GO:0043170,GO:0044036,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0046355,GO:0071554,GO:0071704,GO:1901575 3.2.1.78 0.000000000000000000000000000000000000000000000000001251 204.0
BYD1_k127_11202318_6 - - - - 0.000000000000000000000001386 106.0
BYD1_k127_11202318_7 InterPro IPR007367 - - - 0.00000000000000000002845 92.0
BYD1_k127_11202318_8 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0003846 53.0
BYD1_k127_11204_0 Belongs to the ABC transporter superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 424.0
BYD1_k127_11204_1 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 407.0
BYD1_k127_11204_10 Alpha-amylase domain K01182 - 3.2.1.10 0.0000000004282 69.0
BYD1_k127_11204_11 Yip1 domain - - - 0.000000007619 67.0
BYD1_k127_11204_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 334.0
BYD1_k127_11204_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007418 342.0
BYD1_k127_11204_4 COGs COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 342.0
BYD1_k127_11204_5 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 323.0
BYD1_k127_11204_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001276 289.0
BYD1_k127_11204_7 PQQ-like domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000001918 218.0
BYD1_k127_11204_8 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000003563 203.0
BYD1_k127_11204_9 PFAM Forkhead-associated protein - - - 0.0000000000000000000006809 103.0
BYD1_k127_11231168_0 Linear gramicidin synthase subunit - - - 2.452e-216 692.0
BYD1_k127_11231168_1 Amino acid adenylation domain K01779 - 5.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002253 428.0
BYD1_k127_11259542_0 Thioredoxin - - - 0.00001211 54.0
BYD1_k127_11259542_1 amine dehydrogenase activity - - - 0.0001006 53.0
BYD1_k127_11278977_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 578.0
BYD1_k127_11278977_1 inositol 2-dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 291.0
BYD1_k127_11278977_2 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000014 276.0
BYD1_k127_11278977_3 eight transmembrane protein EpsH - - - 0.00000000000000000000000000000000000000000000000000000000000000000002069 245.0
BYD1_k127_11278977_4 AAA domain K02450 - - 0.00000000000000000000000000000000000000000000000000000000000000189 229.0
BYD1_k127_11278977_5 TIGRFAM EpsI family protein - - - 0.00000000000000000000000000000000000000002962 160.0
BYD1_k127_11278977_6 Chain length determinant protein - - - 0.000000000000000000000000000000000000008763 164.0
BYD1_k127_11290113_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 372.0
BYD1_k127_11290113_1 Branched-chain amino acid transport system / permease component K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 334.0
BYD1_k127_11290113_2 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 318.0
BYD1_k127_11290113_3 ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 306.0
BYD1_k127_11290113_4 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000003027 103.0
BYD1_k127_11290113_5 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000002218 51.0
BYD1_k127_11324974_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 413.0
BYD1_k127_11324974_1 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000002095 169.0
BYD1_k127_1137246_0 radical SAM domain protein - - - 3.212e-294 911.0
BYD1_k127_1137246_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 3.292e-194 627.0
BYD1_k127_1137246_10 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000007509 108.0
BYD1_k127_1137246_11 - - - - 0.00000000000000000002445 95.0
BYD1_k127_1137246_12 Protein of unknown function (DUF692) K09930 - - 0.0000000000000427 74.0
BYD1_k127_1137246_13 PFAM Endonuclease Exonuclease phosphatase - - - 0.000000004306 68.0
BYD1_k127_1137246_14 - - - - 0.0000000184 60.0
BYD1_k127_1137246_2 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 454.0
BYD1_k127_1137246_3 Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 372.0
BYD1_k127_1137246_4 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 301.0
BYD1_k127_1137246_5 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000009165 239.0
BYD1_k127_1137246_6 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 GO:0000726,GO:0003674,GO:0003824,GO:0003953,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006303,GO:0006464,GO:0006471,GO:0006476,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0010212,GO:0016787,GO:0016798,GO:0016799,GO:0019213,GO:0019538,GO:0030312,GO:0033554,GO:0033558,GO:0034641,GO:0034979,GO:0035601,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070213,GO:0071214,GO:0071478,GO:0071479,GO:0071704,GO:0071944,GO:0090304,GO:0098732,GO:0104004,GO:0140096,GO:1901360,GO:1901564 - 0.0000000000000000000000000000000000000000000000000000000000000000008865 235.0
BYD1_k127_1137246_7 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000000000005117 192.0
BYD1_k127_1137246_8 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000005747 158.0
BYD1_k127_1137246_9 peptidase inhibitor activity - - - 0.0000000000000000000000001034 118.0
BYD1_k127_11408810_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 408.0
BYD1_k127_11408810_1 PFAM 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 387.0
BYD1_k127_11408810_2 peptidyl-tyrosine sulfation - - - 0.00000000947 67.0
BYD1_k127_11408810_4 metal-binding protein, possibly nucleic-acid binding protein K07040 - - 0.00007977 49.0
BYD1_k127_11433135_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 527.0
BYD1_k127_11433135_1 Bacterial regulatory protein, Fis family - - - 0.00001955 52.0
BYD1_k127_11433135_2 - - - - 0.0006003 48.0
BYD1_k127_11498987_0 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000003261 261.0
BYD1_k127_11498987_1 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000003467 201.0
BYD1_k127_11498987_2 Belongs to the aspartate-semialdehyde dehydrogenase family K00133 - 1.2.1.11 0.0000000000000000004398 88.0
BYD1_k127_11518990_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 GO:0000287,GO:0001666,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0008976,GO:0009267,GO:0009405,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0015968,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019538,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0036211,GO:0036293,GO:0040007,GO:0042594,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044419,GO:0044464,GO:0046777,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0070482,GO:0071496,GO:0071704,GO:0071944,GO:1901564 2.7.4.1 5.852e-211 677.0
BYD1_k127_11518990_1 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007738 626.0
BYD1_k127_11518990_2 Peptidase family S58 K01266 - 3.4.11.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009308 481.0
BYD1_k127_11518990_3 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000000000000000002218 226.0
BYD1_k127_11518990_4 Tyrosine phosphatase family - - - 0.00000000000000001263 91.0
BYD1_k127_11518990_5 Domain of unknown function (DUF4956) - - - 0.000000001104 69.0
BYD1_k127_11528531_0 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 373.0
BYD1_k127_11528531_1 PFAM Cys Met metabolism K01739,K01761 - 2.5.1.48,4.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 364.0
BYD1_k127_11528531_2 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 312.0
BYD1_k127_11528531_3 - - - - 0.0000000000000000000000000000000000000000000000000000000007357 205.0
BYD1_k127_11528531_4 JAB/MPN domain - - - 0.0000000000000000000000000000000000000000001003 167.0
BYD1_k127_11586370_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 598.0
BYD1_k127_11586370_1 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 325.0
BYD1_k127_11745227_0 Steryl acetyl hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000148 229.0
BYD1_k127_11745227_1 Dihydroorotate dehydrogenase K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000004033 188.0
BYD1_k127_11745227_2 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000000004529 138.0
BYD1_k127_11745227_3 2OG-Fe(II) oxygenase superfamily K07336,K07394 - - 0.0000000000000000000000000000000003949 139.0
BYD1_k127_11745227_4 - - - - 0.0000000000000000000000007363 110.0
BYD1_k127_11746351_0 Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 349.0
BYD1_k127_11746351_1 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.000000000000005215 89.0
BYD1_k127_11746351_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000005888 79.0
BYD1_k127_11746351_3 Sel1 domain protein repeat-containing protein K07126,K13582 - - 0.000001344 62.0
BYD1_k127_11760467_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 526.0
BYD1_k127_11760467_1 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 329.0
BYD1_k127_11760467_2 Cell wall formation K00075 - 1.3.1.98 0.00000000000000000000000000000000000000000001077 172.0
BYD1_k127_11760467_3 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000007279 155.0
BYD1_k127_11768401_0 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 504.0
BYD1_k127_11768401_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 496.0
BYD1_k127_11768401_10 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000008675 60.0
BYD1_k127_11768401_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 426.0
BYD1_k127_11768401_3 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009236 369.0
BYD1_k127_11768401_4 endonuclease III K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000000000000005819 207.0
BYD1_k127_11768401_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000001153 138.0
BYD1_k127_11768401_6 Methyltransferase domain - - - 0.000000000000000000009564 102.0
BYD1_k127_11768401_7 NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit K00341 - 1.6.5.3 0.00000000000000000008285 93.0
BYD1_k127_11768401_8 Belongs to the peptidase S1C family - - - 0.0000000000000000004502 101.0
BYD1_k127_11768401_9 Peptidoglycan L-alanyl-D-glutamate endopeptidase K17733 - - 0.0000000000000625 81.0
BYD1_k127_11830633_0 efflux transmembrane transporter activity K02004 - - 7.249e-204 662.0
BYD1_k127_11830633_1 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000000172 172.0
BYD1_k127_11830633_2 WD40-like Beta Propeller Repeat K03641 - - 0.0000000000000000005264 89.0
BYD1_k127_11875363_0 Cys/Met metabolism PLP-dependent enzyme K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 476.0
BYD1_k127_11875363_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883,K15526 GO:0000166,GO:0001871,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010125,GO:0010126,GO:0010467,GO:0016020,GO:0016070,GO:0016137,GO:0016138,GO:0016874,GO:0016875,GO:0016879,GO:0016880,GO:0017076,GO:0019538,GO:0019752,GO:0030246,GO:0030247,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035446,GO:0035639,GO:0036094,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:2001065 6.1.1.16,6.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 308.0
BYD1_k127_11875363_2 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946,K07123 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000002876 241.0
BYD1_k127_11875363_3 TIR domain - - - 0.0000000000000000000000000000000005425 142.0
BYD1_k127_11875363_4 regulatory protein, MerR - - - 0.000000000000000000000001403 109.0
BYD1_k127_11875363_5 histone H2A K63-linked ubiquitination - - - 0.000000000005645 76.0
BYD1_k127_11875363_6 Domain of unknown function (DUF4440) - - - 0.000000000009046 70.0
BYD1_k127_11985557_0 Ribosomal protein S1 K02945 - - 2.797e-207 661.0
BYD1_k127_11985557_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 490.0
BYD1_k127_11985557_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 382.0
BYD1_k127_11985557_3 7TM receptor with intracellular metal dependent phosphohydrolase K07037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005766 349.0
BYD1_k127_11985557_4 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004036 278.0
BYD1_k127_11985557_5 HIT domain K19710 - 2.7.7.53 0.0000000000000000000000000000000000000000000000000000003877 197.0
BYD1_k127_11985557_6 Peptidase family M50 K06402 - - 0.00000000000000000000000000000000000000000007328 168.0
BYD1_k127_11985557_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.000000000000000000000000000000000000000005346 164.0
BYD1_k127_11985557_8 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K05788 - - 0.00000000000000000000000000000002704 128.0
BYD1_k127_11998779_0 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 3.491e-281 878.0
BYD1_k127_11998779_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000217 139.0
BYD1_k127_11998779_2 AntiSigma factor - - - 0.00002568 49.0
BYD1_k127_12014968_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 404.0
BYD1_k127_12014968_1 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 310.0
BYD1_k127_12014968_2 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 308.0
BYD1_k127_12014968_4 RNA polymerase sigma factor K03088 - - 0.000000000000000171 82.0
BYD1_k127_12014968_5 COG3678 P pilus assembly Cpx signaling pathway, periplasmic inhibitor zinc-resistance associated protein K06006 - - 0.0002915 50.0
BYD1_k127_12024077_0 cellulose binding - - - 3.573e-289 920.0
BYD1_k127_12024077_1 Methylmalonyl-CoA mutase K01847,K01848 - 5.4.99.2 2.791e-230 733.0
BYD1_k127_12024077_10 PLD-like domain K17717 - 3.1.4.4 0.00000001439 69.0
BYD1_k127_12024077_2 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 359.0
BYD1_k127_12024077_3 polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 314.0
BYD1_k127_12024077_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009013 315.0
BYD1_k127_12024077_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009893 282.0
BYD1_k127_12024077_6 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000001812 252.0
BYD1_k127_12024077_7 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000658 220.0
BYD1_k127_12024077_8 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000005003 124.0
BYD1_k127_12024077_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000002809 81.0
BYD1_k127_12024780_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 6.655e-302 945.0
BYD1_k127_12024780_1 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 2.162e-292 925.0
BYD1_k127_12024780_2 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 365.0
BYD1_k127_12024780_3 SMART tyrosine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 376.0
BYD1_k127_12024780_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009095 289.0
BYD1_k127_12024780_5 proline dipeptidase activity K01262 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0016787,GO:0019538,GO:0030145,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000003642 267.0
BYD1_k127_12024780_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000009405 243.0
BYD1_k127_12024780_7 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001515 242.0
BYD1_k127_12024780_8 Tetratricopeptide repeat - - - 0.0000000000000000000000000000002292 133.0
BYD1_k127_12066930_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 469.0
BYD1_k127_12066930_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 421.0
BYD1_k127_12066930_10 Protein of unknown function (DUF3108) - - - 0.000000527 62.0
BYD1_k127_12066930_11 PFAM peptidase S1 and S6, chymotrypsin Hap - - - 0.00001451 55.0
BYD1_k127_12066930_2 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 405.0
BYD1_k127_12066930_3 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007172 366.0
BYD1_k127_12066930_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006492 304.0
BYD1_k127_12066930_5 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004537 259.0
BYD1_k127_12066930_6 Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000003299 228.0
BYD1_k127_12066930_7 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000307 175.0
BYD1_k127_12066930_8 Glycosyl transferase, family 2 K07011 - - 0.000000000000000000000000000000000000000003431 168.0
BYD1_k127_12066930_9 Protein of unknown function (DUF3108) - - - 0.000000000007307 78.0
BYD1_k127_12072099_0 two component, sigma54 specific, transcriptional regulator, Fis family K13599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007996 526.0
BYD1_k127_12072099_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008651 321.0
BYD1_k127_12072099_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007765 244.0
BYD1_k127_12072099_3 Enoyl-(Acyl carrier protein) reductase K00034,K03366 - 1.1.1.304,1.1.1.47,1.1.1.76 0.00000000000000000000000000000000000000000000000000001072 198.0
BYD1_k127_12072099_4 Radical SAM K22227 - - 0.00000000000000000000000000000000000007045 156.0
BYD1_k127_12072099_5 Monogalactosyldiacylglycerol (MGDG) synthase K03715 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006643,GO:0006664,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008194,GO:0008378,GO:0009267,GO:0009507,GO:0009526,GO:0009527,GO:0009536,GO:0009605,GO:0009707,GO:0009941,GO:0009987,GO:0009991,GO:0016020,GO:0016036,GO:0016740,GO:0016757,GO:0016758,GO:0019374,GO:0019752,GO:0019867,GO:0031090,GO:0031667,GO:0031668,GO:0031669,GO:0031967,GO:0031968,GO:0031969,GO:0031975,GO:0032787,GO:0033554,GO:0035250,GO:0042170,GO:0042594,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0098588,GO:0098805,GO:1901135,GO:1903509 2.4.1.46 0.0000000000000000000000000000000000002058 156.0
BYD1_k127_12098859_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 1402.0
BYD1_k127_12098859_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001529 260.0
BYD1_k127_12098859_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000001581 156.0
BYD1_k127_12098859_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.000000000000000000000000000000000000006139 151.0
BYD1_k127_12126686_0 Carboxypeptidase regulatory-like domain - - - 4.052e-290 922.0
BYD1_k127_12126686_1 Acyl-CoA dehydrogenase, C-terminal domain K00248 - 1.3.8.1 6.279e-196 628.0
BYD1_k127_12126686_10 Transposase (IS116 IS110 IS902 family) K07486 - - 0.00002812 46.0
BYD1_k127_12126686_2 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 426.0
BYD1_k127_12126686_3 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 359.0
BYD1_k127_12126686_4 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003117 288.0
BYD1_k127_12126686_5 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003067 264.0
BYD1_k127_12126686_6 Thiolase, C-terminal domain K00632 - 2.3.1.16 0.00000000000000000000000000000000000000000000000000000000000009821 214.0
BYD1_k127_12126686_7 Zn-dependent hydrolase, glyoxylase - - - 0.00000000000000000000000000000000000000000000000000008549 198.0
BYD1_k127_12126686_8 PDZ DHR GLGF domain protein - - - 0.000000000000000000000000002302 124.0
BYD1_k127_12126686_9 C4-type zinc ribbon domain K07164 - - 0.0000000000000000008819 95.0
BYD1_k127_1248103_0 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 481.0
BYD1_k127_1248103_1 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 374.0
BYD1_k127_1248103_2 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006763 335.0
BYD1_k127_1248103_3 GAF domain - - - 0.0000000000000000000000000000000000000000003287 177.0
BYD1_k127_1248103_4 - - - - 0.00000000000000000000000000000000001736 153.0
BYD1_k127_1248103_5 PFAM FecR protein - - - 0.0000000000000000000000000001773 129.0
BYD1_k127_1248103_6 SurA N-terminal domain K01802,K03770 - 5.2.1.8 0.0000001543 64.0
BYD1_k127_1248103_7 antisigma factor binding K03598 - - 0.00009548 53.0
BYD1_k127_1287515_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 617.0
BYD1_k127_1287515_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 377.0
BYD1_k127_1287515_2 PFAM peptidase K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 337.0
BYD1_k127_1287515_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007146 327.0
BYD1_k127_1287515_4 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000001526 191.0
BYD1_k127_1287515_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000007679 183.0
BYD1_k127_1287515_6 Tetrahydrodipicolinate N-succinyltransferase N-terminal K00674 - 2.3.1.117 0.0000000000007462 70.0
BYD1_k127_1287515_7 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000002851 72.0
BYD1_k127_1287515_8 - - - - 0.000001948 51.0
BYD1_k127_1312683_0 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 304.0
BYD1_k127_1312683_1 Nucleotidyl transferase K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000003623 264.0
BYD1_k127_1312683_2 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000001099 233.0
BYD1_k127_1336213_0 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 383.0
BYD1_k127_1336213_1 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K07083,K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 360.0
BYD1_k127_1336213_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 307.0
BYD1_k127_1342264_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003243 581.0
BYD1_k127_1342264_1 - - - - 0.000000000000000000000000000001192 127.0
BYD1_k127_1342264_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.00000000000000005674 82.0
BYD1_k127_1342264_3 Conserved hypothetical protein 95 - - - 0.000000000009721 65.0
BYD1_k127_141073_0 DEAD DEAH box helicase K03724 - - 0.0 1738.0
BYD1_k127_141073_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002851 538.0
BYD1_k127_141073_2 NADPH-dependent FMN reductase K19784 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003724 253.0
BYD1_k127_141073_3 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000000009917 214.0
BYD1_k127_141073_4 metal cluster binding - - - 0.0000000000000000000000000000000000002014 148.0
BYD1_k127_141073_5 YCII-related domain - - - 0.00000000000000000006538 99.0
BYD1_k127_141073_6 COG1977 Molybdopterin converting factor, small subunit K03636 GO:0003674,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0019538,GO:0031386,GO:0032446,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0070647,GO:0071704,GO:1901564 - 0.000000000003664 74.0
BYD1_k127_141073_7 - - - - 0.00004061 51.0
BYD1_k127_1472063_0 AcrB/AcrD/AcrF family K03296 - - 9.96e-227 716.0
BYD1_k127_1472063_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000783 247.0
BYD1_k127_1472063_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000001539 167.0
BYD1_k127_1480342_0 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 519.0
BYD1_k127_1480342_1 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001196 264.0
BYD1_k127_1480342_2 nucleotide metabolic process - - - 0.00000000000000000000000000000000000000000000000000000002504 205.0
BYD1_k127_1480342_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0001871,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0017076,GO:0030234,GO:0030246,GO:0030247,GO:0030554,GO:0036094,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363,GO:2001065 - 0.00000000000000000000000000000002042 135.0
BYD1_k127_1497915_0 PEP-utilising enzyme, N-terminal K02768,K08483,K11183 - 2.7.1.202,2.7.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005398 381.0
BYD1_k127_1497915_1 RNA polymerase sigma-54 factor K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 337.0
BYD1_k127_1497915_2 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007555 316.0
BYD1_k127_1497915_3 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007683 282.0
BYD1_k127_1497915_4 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.00000000000000000000000000000002621 134.0
BYD1_k127_1497915_5 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000008787 126.0
BYD1_k127_1497915_6 PFAM phosphoesterase, RecJ domain protein K07462 - - 0.0000000000002157 74.0
BYD1_k127_1497915_7 OstA-like protein K09774 - - 0.0004348 53.0
BYD1_k127_1509853_0 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000003352 252.0
BYD1_k127_1509853_1 Sulfate ABC transporter substrate-binding protein K02048 - - 0.0000000000000000000000000000000000000000000000000000000000000000008729 241.0
BYD1_k127_1509853_2 Stage II sporulation protein K06381 - - 0.000000000000000000000000000000000000000000000000000000000000002474 244.0
BYD1_k127_1509853_3 ATPase-coupled sulfate transmembrane transporter activity K02018,K02046 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000001081 187.0
BYD1_k127_1509853_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000002495 105.0
BYD1_k127_1509853_5 Domain of unknown function (DUF4190) - - - 0.0003156 48.0
BYD1_k127_1511420_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000263 512.0
BYD1_k127_1511420_1 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008486 317.0
BYD1_k127_1511420_10 Binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000001745 168.0
BYD1_k127_1511420_11 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000001495 152.0
BYD1_k127_1511420_12 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.0000000000000000000000000000001079 126.0
BYD1_k127_1511420_13 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000002284 106.0
BYD1_k127_1511420_14 Ribosomal protein L30 K02907 - - 0.000000000000001256 78.0
BYD1_k127_1511420_15 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000008823 74.0
BYD1_k127_1511420_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000004579 236.0
BYD1_k127_1511420_3 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000005254 217.0
BYD1_k127_1511420_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0003674,GO:0003824,GO:0004017,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.3 0.000000000000000000000000000000000000000000000000000000000001813 217.0
BYD1_k127_1511420_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000002212 212.0
BYD1_k127_1511420_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000005572 196.0
BYD1_k127_1511420_7 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000005418 183.0
BYD1_k127_1511420_8 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000007156 180.0
BYD1_k127_1511420_9 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000005686 172.0
BYD1_k127_1537208_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000000000000002228 221.0
BYD1_k127_1537208_1 Penicillinase repressor - - - 0.000000000000000000001489 100.0
BYD1_k127_1537208_2 TonB-dependent receptor K02014 - - 0.00000000000000000006513 105.0
BYD1_k127_1537208_3 Belongs to the peptidase M48B family - - - 0.0004779 51.0
BYD1_k127_1548507_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.248e-211 675.0
BYD1_k127_1548507_1 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000001198 118.0
BYD1_k127_1637706_0 Bacterial regulatory protein, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 357.0
BYD1_k127_1637706_1 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003522 288.0
BYD1_k127_1669615_0 - K17285 - - 0.0 1289.0
BYD1_k127_1669615_1 Protein of unknown function (DUF763) K09003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 585.0
BYD1_k127_1669615_2 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002761 332.0
BYD1_k127_1669615_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000006456 201.0
BYD1_k127_1669615_4 Cupin domain - - - 0.0000000000000000000000000000000000000000000000008402 176.0
BYD1_k127_1669615_5 - - - - 0.00000000000000000000000000000000000008749 147.0
BYD1_k127_1669615_6 chlorophyll binding - - - 0.000000000000000000000000000000002878 141.0
BYD1_k127_1669615_7 DinB family - - - 0.0000000000000000000000000000007066 126.0
BYD1_k127_1732681_0 Amidohydrolase family K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009506 527.0
BYD1_k127_1732681_1 amino acid K20265 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0006873,GO:0006885,GO:0008150,GO:0008509,GO:0008514,GO:0009987,GO:0015075,GO:0015171,GO:0015179,GO:0015291,GO:0015297,GO:0015318,GO:0015711,GO:0015807,GO:0015849,GO:0016020,GO:0016021,GO:0019725,GO:0022804,GO:0022857,GO:0030003,GO:0030004,GO:0030641,GO:0031224,GO:0031226,GO:0034220,GO:0042592,GO:0044425,GO:0044459,GO:0044464,GO:0045852,GO:0046942,GO:0046943,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0051453,GO:0051454,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:0098771,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 469.0
BYD1_k127_1732681_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 367.0
BYD1_k127_1732681_3 Domain of unknown function (DUF1287) K09974 - - 0.0000000000000000000000000000000000000000000000000000000000000002075 227.0
BYD1_k127_1732681_4 palmitoyl-(protein) hydrolase activity K06999 - - 0.00000000000000000000000000000391 128.0
BYD1_k127_1732681_5 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0000000002246 68.0
BYD1_k127_1740108_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1262.0
BYD1_k127_1740108_1 PFAM Amidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 611.0
BYD1_k127_1740108_2 Histidine phosphatase superfamily (branch 1) - - - 0.0000000000000000000243 98.0
BYD1_k127_1740108_3 Histidine Phosphotransfer domain K03407 - 2.7.13.3 0.00000000001937 64.0
BYD1_k127_1757213_0 Aconitase family (aconitate hydratase) K01681 - 4.2.1.3 0.0 1284.0
BYD1_k127_1757213_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 421.0
BYD1_k127_1757213_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001161 258.0
BYD1_k127_1757213_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000000000002126 182.0
BYD1_k127_1757213_4 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K00135,K00146,K07248 - 1.2.1.16,1.2.1.20,1.2.1.21,1.2.1.22,1.2.1.39,1.2.1.79 0.00000000000007144 72.0
BYD1_k127_1757213_5 - - - - 0.00000000007568 68.0
BYD1_k127_1834585_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1578.0
BYD1_k127_1834585_1 Phosphate acyltransferases K01897 - 6.2.1.3 2.065e-222 714.0
BYD1_k127_1834585_10 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000003511 179.0
BYD1_k127_1834585_11 BON domain - - - 0.00000000000000000000000000000000000000000002547 167.0
BYD1_k127_1834585_12 FtsX-like permease family - - - 0.000000000000000000000000000000000000000006429 161.0
BYD1_k127_1834585_13 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000006667 155.0
BYD1_k127_1834585_14 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000003246 119.0
BYD1_k127_1834585_15 - - - - 0.0000000000000000000000000000362 125.0
BYD1_k127_1834585_16 Protein of unknown function (DUF4019) - - - 0.0000000000000000000005407 100.0
BYD1_k127_1834585_17 Prokaryotic N-terminal methylation motif K02650 - - 0.0000002019 62.0
BYD1_k127_1834585_2 Right handed beta helix region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 615.0
BYD1_k127_1834585_3 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005722 476.0
BYD1_k127_1834585_4 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 376.0
BYD1_k127_1834585_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003495 379.0
BYD1_k127_1834585_6 Putative neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 353.0
BYD1_k127_1834585_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008479 323.0
BYD1_k127_1834585_8 pectinesterase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000009534 239.0
BYD1_k127_1834585_9 LytTr DNA-binding domain K02477 - - 0.000000000000000000000000000000000000000000000000000000001173 209.0
BYD1_k127_1857320_0 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 504.0
BYD1_k127_1857320_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002234 259.0
BYD1_k127_1859310_0 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000002877 243.0
BYD1_k127_1859310_1 Secretin and TonB N terminus short domain K02666 - - 0.000000000000000000000000000000000000000000000000000000000000001736 239.0
BYD1_k127_1859310_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000002714 188.0
BYD1_k127_1859310_3 Roadblock/LC7 domain - - - 0.0000000000000464 76.0
BYD1_k127_1859310_4 PFAM helix-turn-helix domain protein K07729 - - 0.0003561 48.0
BYD1_k127_1887114_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 494.0
BYD1_k127_1887114_1 - - - - 0.00000003408 57.0
BYD1_k127_1967648_0 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 470.0
BYD1_k127_1967648_1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000001085 96.0
BYD1_k127_1967648_2 Transposase (IS116 IS110 IS902 family) K07486 - - 0.00002812 46.0
BYD1_k127_1994405_0 6-phosphofructokinase activity K00850,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006841 456.0
BYD1_k127_1994405_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008946 429.0
BYD1_k127_1994405_10 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000006605 113.0
BYD1_k127_1994405_11 Trm112p-like protein K09791 - - 0.0000000000000000000008381 95.0
BYD1_k127_1994405_12 Aminotransferase class-V - - - 0.000000000000000001024 91.0
BYD1_k127_1994405_13 3D domain - - - 0.000000000000001229 84.0
BYD1_k127_1994405_14 DinB family - - - 0.00000003535 63.0
BYD1_k127_1994405_15 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.000006878 56.0
BYD1_k127_1994405_2 D-alanyl-d-alanine carboxypeptidase K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009155 327.0
BYD1_k127_1994405_3 L-asparaginase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006445 307.0
BYD1_k127_1994405_4 pfkB family carbohydrate kinase K03272 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008452 280.0
BYD1_k127_1994405_5 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000793 222.0
BYD1_k127_1994405_6 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000001853 211.0
BYD1_k127_1994405_7 PQQ enzyme repeat - - - 0.00000000000000000000000000000000000000000000000005466 193.0
BYD1_k127_1994405_8 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000000002321 148.0
BYD1_k127_1994405_9 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.0000000000000000000000000000000254 139.0
BYD1_k127_2005884_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.249e-209 657.0
BYD1_k127_2005884_1 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 528.0
BYD1_k127_2005884_10 Sigma-70, region 4 - - - 0.000000000000000000000003781 106.0
BYD1_k127_2005884_12 cell adhesion involved in biofilm formation - - - 0.000006566 60.0
BYD1_k127_2005884_13 Cytochrome c K07245,K14166 - - 0.000007459 53.0
BYD1_k127_2005884_2 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007799 427.0
BYD1_k127_2005884_3 Belongs to the arginase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 290.0
BYD1_k127_2005884_4 Chlorite dismutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002595 283.0
BYD1_k127_2005884_5 Membrane - - - 0.00000000000000000000000000000000000000000000000000006925 210.0
BYD1_k127_2005884_6 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000001695 155.0
BYD1_k127_2005884_7 Cytochrome b/b6/petB K00412,K03888 - - 0.00000000000000000000000000000000000008022 158.0
BYD1_k127_2005884_8 - - - - 0.000000000000000000000000000000000003393 152.0
BYD1_k127_2005884_9 Rieske [2Fe-2S] domain K03886 - - 0.000000000000000000000000004773 116.0
BYD1_k127_2006727_0 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000819 413.0
BYD1_k127_2006727_1 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008039 416.0
BYD1_k127_2006727_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005457 383.0
BYD1_k127_2006727_3 peroxiredoxin activity - - - 0.0000000000000000000000000000000000000000000000004462 182.0
BYD1_k127_2006727_4 acetyltransferase - - - 0.00000000000000000000000000000000000000006683 156.0
BYD1_k127_2006727_5 PFAM Alkyl hydroperoxide reductase - - - 0.0000000000000000001741 93.0
BYD1_k127_2055843_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 501.0
BYD1_k127_2055843_1 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 462.0
BYD1_k127_2055843_2 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 419.0
BYD1_k127_2055843_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000003616 228.0
BYD1_k127_2055843_4 O-Antigen ligase K02847 - - 0.000000000000000000000000000000000000000000004148 182.0
BYD1_k127_2055843_5 Sulfotransferase family - - - 0.00002333 57.0
BYD1_k127_2063034_0 Vault protein inter-alpha-trypsin domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 513.0
BYD1_k127_2063034_1 Type II/IV secretion system protein K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 469.0
BYD1_k127_2063034_10 Quinolinate phosphoribosyl transferase, C-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000005717 253.0
BYD1_k127_2063034_11 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000007845 213.0
BYD1_k127_2063034_12 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000000000000000000000001205 177.0
BYD1_k127_2063034_13 nudix family K01515 - 3.6.1.13 0.0000000000000000000000000000000000000005416 155.0
BYD1_k127_2063034_14 - - - - 0.00000000000000000000000000000000000004507 152.0
BYD1_k127_2063034_15 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000004945 141.0
BYD1_k127_2063034_16 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000001669 147.0
BYD1_k127_2063034_17 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000001634 143.0
BYD1_k127_2063034_18 Zn peptidase K21686 - - 0.0000000000000000000000000008296 120.0
BYD1_k127_2063034_19 von Willebrand factor (vWF) type A domain K07114 - - 0.000000000000000000000003176 114.0
BYD1_k127_2063034_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 385.0
BYD1_k127_2063034_20 Xanthine and CO dehydrogenases maturation factor XdhC CoxF K07402 - - 0.000000000000000000000005449 105.0
BYD1_k127_2063034_21 iron ion homeostasis - - - 0.00000000000000000000038 109.0
BYD1_k127_2063034_22 PFAM regulatory protein GntR HTH K07979 - - 0.0000000000000000002604 92.0
BYD1_k127_2063034_23 von Willebrand factor, type A - - - 0.00000000000000001939 95.0
BYD1_k127_2063034_24 methyltransferase - - - 0.00000000000000002607 91.0
BYD1_k127_2063034_25 FAD dependent oxidoreductase K09835 - 5.2.1.13 0.000000000000002271 88.0
BYD1_k127_2063034_27 sequence-specific DNA binding - - - 0.00002678 52.0
BYD1_k127_2063034_28 CAAX protease self-immunity K07052 - - 0.00009057 54.0
BYD1_k127_2063034_3 COGs COG2208 Serine phosphatase RsbU regulator of sigma subunit K01768,K07315 - 3.1.3.3,4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 338.0
BYD1_k127_2063034_4 Peptidase M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 322.0
BYD1_k127_2063034_5 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 324.0
BYD1_k127_2063034_6 COG2513 PEP phosphonomutase and related enzymes K03417 - 4.1.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 306.0
BYD1_k127_2063034_7 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000201 295.0
BYD1_k127_2063034_8 PFAM Mur ligase K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 295.0
BYD1_k127_2063034_9 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002596 280.0
BYD1_k127_2065305_0 Asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 543.0
BYD1_k127_2065305_1 Heparinase II/III N-terminus - - - 0.0000000000000000000000000000000000000000000000001854 190.0
BYD1_k127_2073095_0 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 544.0
BYD1_k127_2185112_0 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 483.0
BYD1_k127_2185112_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 376.0
BYD1_k127_2185112_2 Highly conserved protein containing a thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002096 301.0
BYD1_k127_2185112_3 Hexapeptide repeat of succinyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003145 243.0
BYD1_k127_2185112_4 Protein of unknown function (DUF354) K09726 - - 0.0000000000000000000000005258 109.0
BYD1_k127_2209921_0 Amidohydrolase family K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004194 477.0
BYD1_k127_2209921_1 Asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004792 433.0
BYD1_k127_2209921_10 ATP-dependent protease La (LON) substrate-binding domain K01338 - 3.4.21.53 0.0000000000000000000000000000000000000000004271 168.0
BYD1_k127_2209921_11 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.00000000000000000001908 94.0
BYD1_k127_2209921_12 - - - - 0.00000000000000000008921 102.0
BYD1_k127_2209921_13 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07669,K07672 - - 0.000000000003708 74.0
BYD1_k127_2209921_14 CBD_II K01179,K01183 - 3.2.1.14,3.2.1.4 0.0001912 53.0
BYD1_k127_2209921_2 PRMT5 arginine-N-methyltransferase K11434 - 2.1.1.319 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 394.0
BYD1_k127_2209921_3 Peptidase dimerisation domain K01438 - 3.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 389.0
BYD1_k127_2209921_4 ABC transporter K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 378.0
BYD1_k127_2209921_5 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 348.0
BYD1_k127_2209921_6 HPr kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000803 297.0
BYD1_k127_2209921_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.00000000000000000000000000000000000000000000000000000000000029 228.0
BYD1_k127_2209921_8 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000006592 194.0
BYD1_k127_2209921_9 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000005234 175.0
BYD1_k127_2226123_0 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 457.0
BYD1_k127_2226123_1 Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 448.0
BYD1_k127_2226123_10 Glutathione peroxidase - - - 0.000001595 58.0
BYD1_k127_2226123_2 3'(2'),5'-bisphosphate nucleotidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 358.0
BYD1_k127_2226123_3 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005322 284.0
BYD1_k127_2226123_4 Aldehyde dehydrogenase family K22445 - 1.2.99.10 0.000000000000000000000000000000000000000000000000000000574 200.0
BYD1_k127_2226123_5 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.000000000000000000000000000000000000000000000000000001166 207.0
BYD1_k127_2226123_6 - - - - 0.000000000000000000000000000000000000000000006766 166.0
BYD1_k127_2226123_7 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.00000000000000000000000000000001307 130.0
BYD1_k127_2226123_8 cell redox homeostasis K22278 - 3.5.1.104 0.000000000000000000001905 108.0
BYD1_k127_2226123_9 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000009771 102.0
BYD1_k127_2227774_0 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009004 362.0
BYD1_k127_2227774_1 PFAM Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 301.0
BYD1_k127_2227774_2 Peptidase M16 inactive domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006368 294.0
BYD1_k127_2227774_3 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000001218 273.0
BYD1_k127_2227774_4 Peptidase family M1 domain - - - 0.0000000000000000000000000001203 129.0
BYD1_k127_2227774_5 Tetratricopeptide repeat - - - 0.0000002228 65.0
BYD1_k127_2240810_0 transport - - - 1.023e-321 1024.0
BYD1_k127_2240810_1 beta-lactamase - - - 3.328e-255 810.0
BYD1_k127_2240810_10 phospholipase C - - - 0.0000000000000000000000000000000000000000000000000000000001258 223.0
BYD1_k127_2240810_11 Glycosyl hydrolase-like 10 - - - 0.00000000000000000000000000000000000000000002674 177.0
BYD1_k127_2240810_12 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000002136 164.0
BYD1_k127_2240810_13 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000002828 160.0
BYD1_k127_2240810_14 BadF/BadG/BcrA/BcrD ATPase family - - - 0.000000000000000000000000000000000000005979 158.0
BYD1_k127_2240810_15 AntiSigma factor - - - 0.000000000000000000009366 104.0
BYD1_k127_2240810_16 helix_turn_helix, Lux Regulon K21685 - - 0.000000003589 66.0
BYD1_k127_2240810_2 PFAM D-aminoacylase, C-terminal region K06015 - 3.5.1.81 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 560.0
BYD1_k127_2240810_3 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004186 443.0
BYD1_k127_2240810_4 symporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 386.0
BYD1_k127_2240810_5 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 390.0
BYD1_k127_2240810_6 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01665,K02619,K03342,K13503,K13950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85,4.1.3.27,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 356.0
BYD1_k127_2240810_7 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 330.0
BYD1_k127_2240810_8 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003433 284.0
BYD1_k127_2240810_9 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001993 238.0
BYD1_k127_2273214_0 cellulose binding - - - 4.796e-294 935.0
BYD1_k127_2273214_1 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000167 259.0
BYD1_k127_2300492_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 426.0
BYD1_k127_2300492_1 NAD NADP transhydrogenase alpha subunit K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 377.0
BYD1_k127_2300492_2 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000004022 134.0
BYD1_k127_232519_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 306.0
BYD1_k127_232519_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000209 281.0
BYD1_k127_232519_2 Belongs to the DNA polymerase type-C family. DnaE2 subfamily K14162 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000001009 232.0
BYD1_k127_232519_3 recA bacterial DNA recombination protein - - - 0.000000000000000000000000000000000000000000000002493 182.0
BYD1_k127_2501433_0 PFAM peptidase M16 domain protein K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 496.0
BYD1_k127_2501433_1 Insulinase (Peptidase family M16) K07263 - - 0.00000000000000000000000000000000000383 144.0
BYD1_k127_2501433_2 - - - - 0.00000000000009449 76.0
BYD1_k127_2534153_0 NADH oxidase - - - 4.196e-209 660.0
BYD1_k127_2534153_1 Aminotransferase class-V K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 471.0
BYD1_k127_2534153_10 Redoxin family - - - 0.00000001153 63.0
BYD1_k127_2534153_2 NADH:flavin oxidoreductase / NADH oxidase family K09461 - 1.14.13.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008578 373.0
BYD1_k127_2534153_3 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 370.0
BYD1_k127_2534153_4 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005135 335.0
BYD1_k127_2534153_5 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 310.0
BYD1_k127_2534153_6 - - - - 0.0000000000000000000000000000000000000000001005 166.0
BYD1_k127_2534153_7 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 0.0000000000000000000000000000000000001715 145.0
BYD1_k127_2534153_8 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000004222 138.0
BYD1_k127_2534153_9 PFAM HD domain - - - 0.0000000000000000000000000000000253 134.0
BYD1_k127_2557386_0 Zinc-binding dehydrogenase - - - 7.35e-290 906.0
BYD1_k127_2557386_1 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 385.0
BYD1_k127_2557386_2 Domain of unknown function (DUF362) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 368.0
BYD1_k127_2557386_3 transferase activity, transferring glycosyl groups K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 346.0
BYD1_k127_2557386_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000138 205.0
BYD1_k127_2557386_5 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000001648 188.0
BYD1_k127_2557386_6 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000006632 162.0
BYD1_k127_2557386_7 xylanase chitin deacetylase - - - 0.000000000000000000000000000000001199 132.0
BYD1_k127_2557386_8 methyltransferase - - - 0.00000000000000000000000000002788 125.0
BYD1_k127_2557386_9 O-Antigen ligase - - - 0.000000001264 71.0
BYD1_k127_258169_0 WD domain, G-beta repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000775 569.0
BYD1_k127_258169_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 341.0
BYD1_k127_258169_2 Protein of unknown function (DUF1800) - - - 0.00000000000000000000136 107.0
BYD1_k127_265981_0 Transketolase, pyrimidine binding domain K11381 - 1.2.4.4 1.08e-297 930.0
BYD1_k127_265981_1 Acyl-CoA dehydrogenase, C-terminal domain K00248,K09478 - 1.3.8.1,1.3.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007693 548.0
BYD1_k127_265981_10 peptidase M15B and M15C DD-carboxypeptidase VanY - - - 0.00000000000000000004451 101.0
BYD1_k127_265981_11 chaperone-mediated protein folding - - - 0.000000000000000002097 89.0
BYD1_k127_265981_12 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 0.00000000000002667 84.0
BYD1_k127_265981_2 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000233 548.0
BYD1_k127_265981_3 Aminotransferase class-V - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000511 455.0
BYD1_k127_265981_4 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 391.0
BYD1_k127_265981_5 Peptidase M16 inactive domain K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 318.0
BYD1_k127_265981_6 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000001918 239.0
BYD1_k127_265981_7 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000001852 211.0
BYD1_k127_265981_8 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000005732 216.0
BYD1_k127_265981_9 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.00000000000000000000000001935 113.0
BYD1_k127_267108_0 transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001986 246.0
BYD1_k127_267108_1 Alpha beta hydrolase K15756 - 3.7.1.13 0.000000000000000000000000000000000000000000000000001293 192.0
BYD1_k127_267108_2 N-terminal half of MaoC dehydratase K17865 - 4.2.1.55 0.000000000000000000000000000000000000000001589 159.0
BYD1_k127_2700286_0 Asparagine synthase K01953 - 6.3.5.4 1.946e-194 625.0
BYD1_k127_2700286_1 oxidoreductase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 488.0
BYD1_k127_2700286_2 Highly conserved protein containing a thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008251 302.0
BYD1_k127_2700286_3 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004399 292.0
BYD1_k127_2700286_4 Protein of unknown function (DUF354) K09726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005813 252.0
BYD1_k127_2700286_5 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002318 241.0
BYD1_k127_2700286_6 PFAM Peptidase M20 - - - 0.00000000000000000000000000000000000000000000000000000000291 215.0
BYD1_k127_2700286_7 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.0000000000000000000000000000001044 127.0
BYD1_k127_2700286_8 major pilin protein fima - - - 0.00000000000000000001223 93.0
BYD1_k127_2704368_0 Tricorn protease C1 domain K08676 - - 0.0 1344.0
BYD1_k127_2704368_1 peptidase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002904 269.0
BYD1_k127_2704368_2 acetyltransferase - - - 0.00000000000000000000000000000000000000001505 158.0
BYD1_k127_2704368_3 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000002847 147.0
BYD1_k127_2719508_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 496.0
BYD1_k127_2719508_1 Domain of unknown function (DUF1972) K12996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003837 424.0
BYD1_k127_2719508_10 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000261 96.0
BYD1_k127_2719508_11 Belongs to the UPF0109 family K06960 - - 0.00000000000003151 74.0
BYD1_k127_2719508_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 385.0
BYD1_k127_2719508_3 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 367.0
BYD1_k127_2719508_4 Glycosyl transferases group 1 K12994 - 2.4.1.349 0.000000000000000000000000000000000000000000000000000000000000000000000000000000017 281.0
BYD1_k127_2719508_5 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003755 273.0
BYD1_k127_2719508_6 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002176 291.0
BYD1_k127_2719508_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000002371 155.0
BYD1_k127_2719508_8 - - - - 0.00000000000000000000000000005978 131.0
BYD1_k127_2719508_9 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000006016 118.0
BYD1_k127_2725339_0 PFAM NHL repeat - - - 1.635e-203 658.0
BYD1_k127_2725339_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007161 490.0
BYD1_k127_2725339_2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001949 425.0
BYD1_k127_2725339_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 346.0
BYD1_k127_2725339_4 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001006 280.0
BYD1_k127_2725339_5 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000002024 208.0
BYD1_k127_2725339_6 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000004475 154.0
BYD1_k127_2725339_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000002502 131.0
BYD1_k127_2725339_8 membrane protein (homolog of Drosophila rhomboid) K19225 - 3.4.21.105 0.000000000000000000000000000001051 136.0
BYD1_k127_2725339_9 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.00000000000000000000000004811 120.0
BYD1_k127_2732300_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1064.0
BYD1_k127_2732300_1 Domain of unknown function (DUF4388) K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000002196 236.0
BYD1_k127_2732300_2 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000000000000000000000000000000000000005486 226.0
BYD1_k127_2732300_3 WD-40 repeat - - - 0.000000000000000000000000000000000000000000000000000005866 204.0
BYD1_k127_281445_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.297e-279 871.0
BYD1_k127_281445_1 PFAM Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004527 554.0
BYD1_k127_281445_2 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 375.0
BYD1_k127_281445_3 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 355.0
BYD1_k127_281445_4 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 312.0
BYD1_k127_281445_5 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000005935 252.0
BYD1_k127_281445_6 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000005444 150.0
BYD1_k127_281445_7 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000001954 109.0
BYD1_k127_2855021_0 ATPases associated with a variety of cellular activities K10823,K10824 - 3.6.3.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 441.0
BYD1_k127_2855021_1 Belongs to the ABC transporter superfamily K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007682 420.0
BYD1_k127_2855021_2 'ABC-type dipeptide oligopeptide nickel transport K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 356.0
BYD1_k127_2855021_3 transporter, permease K02033,K15581 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 314.0
BYD1_k127_2855021_4 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006642 269.0
BYD1_k127_2855021_5 HD domain - - - 0.000000000000000000000000000000000000000000000002008 189.0
BYD1_k127_2855021_6 sigma factor antagonist activity K04757 - 2.7.11.1 0.00000000002698 77.0
BYD1_k127_2855021_7 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000008285 55.0
BYD1_k127_2855021_8 antisigma factor binding - - - 0.00000009158 59.0
BYD1_k127_2855021_9 Fha domain - - - 0.0001721 50.0
BYD1_k127_2894906_1 ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000003117 164.0
BYD1_k127_2894906_2 - - - - 0.0000000000000000000000000002346 119.0
BYD1_k127_2948331_0 acyl-CoA dehydrogenase activity K09456 - - 4.994e-220 694.0
BYD1_k127_2948331_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 5.566e-199 632.0
BYD1_k127_2948331_2 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008887 497.0
BYD1_k127_2948331_3 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 502.0
BYD1_k127_2948331_4 Putative cyclase K07130 GO:0003674,GO:0003824,GO:0004061,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019439,GO:0019441,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 332.0
BYD1_k127_2948331_5 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005835 349.0
BYD1_k127_2948331_6 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000002111 188.0
BYD1_k127_2948331_7 Ankyrin repeats (many copies) K06867 - - 0.00009669 54.0
BYD1_k127_2948331_8 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787,K15726 - - 0.0007427 42.0
BYD1_k127_295157_0 Belongs to the deoxyhypusine synthase family K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 517.0
BYD1_k127_295157_1 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007429 383.0
BYD1_k127_295157_2 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000001992 228.0
BYD1_k127_295157_3 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000002699 194.0
BYD1_k127_295157_4 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000002148 139.0
BYD1_k127_295157_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000117 119.0
BYD1_k127_295157_6 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.000000000000000000002526 96.0
BYD1_k127_295157_7 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000004313 78.0
BYD1_k127_295157_8 Lipopolysaccharide-assembly - - - 0.000000000000005166 83.0
BYD1_k127_295157_9 - - - - 0.000000000000006966 80.0
BYD1_k127_2983787_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 431.0
BYD1_k127_2983787_1 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 396.0
BYD1_k127_2983787_10 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000001664 103.0
BYD1_k127_2983787_11 RDD family - - - 0.000000003703 63.0
BYD1_k127_2983787_2 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004285 272.0
BYD1_k127_2983787_3 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004912 266.0
BYD1_k127_2983787_4 orotate phosphoribosyltransferase activity K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000002344 199.0
BYD1_k127_2983787_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000002723 203.0
BYD1_k127_2983787_6 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000004483 191.0
BYD1_k127_2983787_7 'dna polymerase iii K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000002795 192.0
BYD1_k127_2983787_8 Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02342,K03763 - 2.7.7.7 0.000000000000000000000000000000000000000008982 164.0
BYD1_k127_2983787_9 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.00000000000000000000000000000000000006297 153.0
BYD1_k127_3079993_0 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 449.0
BYD1_k127_3079993_1 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 315.0
BYD1_k127_3079993_11 Forkhead associated domain - - - 0.000000000003836 68.0
BYD1_k127_3079993_12 RDD family - - - 0.0000000009344 66.0
BYD1_k127_3079993_2 COG0515 Serine threonine protein K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000002812 256.0
BYD1_k127_3079993_3 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000000000000000000000000000000000000000002117 220.0
BYD1_k127_3079993_4 Pfam Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000002137 217.0
BYD1_k127_3079993_5 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000000000000000000000001002 206.0
BYD1_k127_3079993_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.0000000000000000000000000000000000000003525 153.0
BYD1_k127_3079993_7 - - - - 0.00000000000000000000000000001078 125.0
BYD1_k127_3079993_9 DNA polymerase X family K02347 - - 0.000000000000000000000000000505 118.0
BYD1_k127_3182243_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter MnhA subunit K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 496.0
BYD1_k127_3182243_1 PFAM NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005036 452.0
BYD1_k127_3182243_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 360.0
BYD1_k127_3182243_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000004382 130.0
BYD1_k127_3182243_4 PFAM NADH-ubiquinone plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000001837 122.0
BYD1_k127_3182243_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000002427 103.0
BYD1_k127_3183447_0 Tetratricopeptide repeat - - - 5.874e-247 799.0
BYD1_k127_3183447_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 428.0
BYD1_k127_3183447_2 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 410.0
BYD1_k127_3183447_3 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 334.0
BYD1_k127_3183447_4 anion transmembrane transporter activity K02049,K15555,K15558 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003126 283.0
BYD1_k127_3183447_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000001548 233.0
BYD1_k127_3183447_6 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000002049 191.0
BYD1_k127_3183447_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000003277 174.0
BYD1_k127_3183447_9 SnoaL-like domain - - - 0.00009831 53.0
BYD1_k127_3200824_0 PFAM aminotransferase, class I K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 421.0
BYD1_k127_3200824_1 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009858 336.0
BYD1_k127_3200824_2 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009441 275.0
BYD1_k127_3200824_3 Regulatory protein, FmdB family - - - 0.00000000000000000008891 93.0
BYD1_k127_3200824_4 TIGRFAM VWFA-related Acidobacterial domain - - - 0.0000000006149 70.0
BYD1_k127_3200824_5 general stress protein - - - 0.000001425 55.0
BYD1_k127_328671_0 Pyridoxal-phosphate dependent enzyme K12339 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004728 370.0
BYD1_k127_328671_1 Cys Met metabolism K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 367.0
BYD1_k127_328671_2 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000006466 242.0
BYD1_k127_328671_3 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process - - - 0.000000000000000000000000000000000000000000000000006013 193.0
BYD1_k127_328671_4 JAB/MPN domain - - - 0.0000000000000000000000000000000000000000000002447 172.0
BYD1_k127_328671_5 Cytochrome c - - - 0.00000000000000000000000001655 111.0
BYD1_k127_329603_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 485.0
BYD1_k127_329603_1 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0040007,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000007405 114.0
BYD1_k127_3311663_0 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K02003,K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005235 261.0
BYD1_k127_3311663_1 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000267 240.0
BYD1_k127_3311663_2 FtsX-like permease family - - - 0.000000000000000000000000000000003224 138.0
BYD1_k127_3317540_0 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 361.0
BYD1_k127_3317540_1 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 362.0
BYD1_k127_3317540_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 298.0
BYD1_k127_335566_0 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 525.0
BYD1_k127_335566_1 Iron-containing alcohol dehydrogenase K00001,K13954 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 424.0
BYD1_k127_335566_2 protein kinase related protein - - - 0.0000000000000000000000000008018 115.0
BYD1_k127_335566_3 PQQ enzyme repeat - - - 0.00000000000000000007659 97.0
BYD1_k127_3427882_0 AIR carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000001152 203.0
BYD1_k127_3427882_1 Lecithin:cholesterol acyltransferase - - - 0.00000000000000000000000000000000000000000000003179 188.0
BYD1_k127_3427882_2 Tetratricopeptide repeat - - - 0.000000000008716 68.0
BYD1_k127_3483063_0 PFAM carbohydrate kinase K00854 - 2.7.1.17 1.187e-225 708.0
BYD1_k127_3483063_1 pfkB family carbohydrate kinase K00874 - 2.7.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 573.0
BYD1_k127_3483063_10 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000001635 202.0
BYD1_k127_3483063_11 protein histidine kinase activity - - - 0.00000000000000000000000000000000000000000000000004155 196.0
BYD1_k127_3483063_12 transmembrane transporter activity - - - 0.000000000000000000000000000006211 124.0
BYD1_k127_3483063_13 cellulose binding - - - 0.00000000000000000000000000007309 138.0
BYD1_k127_3483063_14 Belongs to the glycosyl hydrolase 43 family - - - 0.000000000000002014 77.0
BYD1_k127_3483063_2 PFAM Major Facilitator Superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 559.0
BYD1_k127_3483063_3 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 476.0
BYD1_k127_3483063_4 D-galactarate dehydratase / Altronate hydrolase, C terminus K01685,K01708 - 4.2.1.42,4.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 397.0
BYD1_k127_3483063_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 358.0
BYD1_k127_3483063_6 glucosamine-6-phosphate deaminase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 342.0
BYD1_k127_3483063_7 Calx-beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 374.0
BYD1_k127_3483063_8 PFAM KDPG and KHG aldolase K01625 - 4.1.2.14,4.1.3.42 0.000000000000000000000000000000000000000000000000000000000000000000000000003215 263.0
BYD1_k127_3483063_9 membrane protein (DUF2306) - - - 0.00000000000000000000000000000000000000000000000000000001423 205.0
BYD1_k127_3495186_0 FGGY family of carbohydrate kinases, C-terminal domain K00851 - 2.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000677 377.0
BYD1_k127_3496926_0 PFAM Amidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 608.0
BYD1_k127_3496926_1 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000000004035 133.0
BYD1_k127_3521036_0 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 430.0
BYD1_k127_3521036_1 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000009582 205.0
BYD1_k127_3553976_0 beta' subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 393.0
BYD1_k127_3553976_1 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 347.0
BYD1_k127_3553976_2 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000000000005485 170.0
BYD1_k127_3553976_3 Involved in the tonB-independent uptake of proteins - - - 0.0000000000468 64.0
BYD1_k127_3568327_0 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 574.0
BYD1_k127_3568327_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006905 434.0
BYD1_k127_3568327_2 Peptidase, S9A B C family, catalytic domain protein K01303 - 3.4.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 399.0
BYD1_k127_3568327_3 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008856 276.0
BYD1_k127_3568327_4 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000004848 239.0
BYD1_k127_3568327_5 ECF sigma factor - - - 0.0000000000000000000000000000000000000000002171 168.0
BYD1_k127_3568327_6 - - - - 0.0006272 49.0
BYD1_k127_3579041_0 permease for cytosine purines, uracil, thiamine, allantoin K03457 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 578.0
BYD1_k127_3579041_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003032 467.0
BYD1_k127_3579041_2 endonuclease exonuclease phosphatase K07004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 482.0
BYD1_k127_3579041_3 4Fe-4S dicluster domain K17723 - 1.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 441.0
BYD1_k127_3579041_4 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 441.0
BYD1_k127_3579041_5 Exodeoxyribonuclease iii K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 313.0
BYD1_k127_3579041_6 Peptidase dimerisation domain K01295 - 3.4.17.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 300.0
BYD1_k127_3579041_7 Evidence 5 No homology to any previously reported sequences K07004,K13276 - - 0.0000000000000000000001982 105.0
BYD1_k127_3579041_8 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000002593 72.0
BYD1_k127_3587945_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.673e-310 965.0
BYD1_k127_3587945_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000822 438.0
BYD1_k127_3587945_10 Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway K16329 - 4.2.1.70 0.00000000000000005249 82.0
BYD1_k127_3587945_2 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004308 258.0
BYD1_k127_3587945_3 response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000007343 215.0
BYD1_k127_3587945_4 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000002544 198.0
BYD1_k127_3587945_5 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.00000000000000000000000000000000000000000000005254 180.0
BYD1_k127_3587945_6 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000002788 159.0
BYD1_k127_3587945_7 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000005805 134.0
BYD1_k127_3587945_8 AI-2E family transporter - - - 0.00000000000000000000000000000002537 141.0
BYD1_k127_3587945_9 - catabolite gene activator and regulatory subunit of cAMP-dependent protein K10914 - - 0.00000000000000000000002935 109.0
BYD1_k127_3679559_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 7.482e-218 691.0
BYD1_k127_3679559_1 ATPase family associated with various cellular activities (AAA) - - - 4.462e-212 676.0
BYD1_k127_3679559_10 - - - - 0.000000000000000000008455 100.0
BYD1_k127_3679559_11 Belongs to the cytochrome P450 family - - - 0.000002438 49.0
BYD1_k127_3679559_12 Peptidase family M1 domain - - - 0.0000281 57.0
BYD1_k127_3679559_13 - - - - 0.00005153 47.0
BYD1_k127_3679559_2 Molecular chaperone. Has ATPase activity K04079 GO:0000302,GO:0000303,GO:0000305,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009987,GO:0010035,GO:0016020,GO:0030312,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0044464,GO:0050896,GO:0051716,GO:0070887,GO:0071450,GO:0071451,GO:0071944,GO:1901700,GO:1901701 - 1.618e-199 645.0
BYD1_k127_3679559_3 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002243 355.0
BYD1_k127_3679559_4 Belongs to the KdsA family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 330.0
BYD1_k127_3679559_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000228 250.0
BYD1_k127_3679559_6 Cytidylyltransferase K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000008707 229.0
BYD1_k127_3679559_7 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000002835 181.0
BYD1_k127_3679559_8 - - - - 0.0000000000000000000000000000000000000000000004518 170.0
BYD1_k127_3679559_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000001882 166.0
BYD1_k127_3688110_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 567.0
BYD1_k127_3688110_1 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006912 370.0
BYD1_k127_3688110_2 Uncharacterized protein conserved in bacteria (DUF2199) - - - 0.0000000000000000000000000000001575 134.0
BYD1_k127_3688110_3 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000003464 127.0
BYD1_k127_3688110_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized pyrimidines, such as thymine glycol, 5,6-dihydrouracil and 5,6-dihydrothymine. Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'- phosphates K05522 GO:0000702,GO:0000703,GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003824,GO:0003906,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363 4.2.99.18 0.00000000000000000000000003776 119.0
BYD1_k127_3688110_7 - - - - 0.00009713 50.0
BYD1_k127_3699126_0 iron-nicotianamine transmembrane transporter activity - - - 4.389e-268 847.0
BYD1_k127_3699126_1 Zinc carboxypeptidase - - - 2.011e-208 674.0
BYD1_k127_3699126_10 Carbohydrate family 9 binding domain-like - - - 0.000000000000000000000007156 109.0
BYD1_k127_3699126_11 PFAM response regulator receiver K02483,K07658,K07668 - - 0.0000000000000000000003383 109.0
BYD1_k127_3699126_12 PAS domain - - - 0.000000000000000231 91.0
BYD1_k127_3699126_13 Domain of unknown function (DUF1844) - - - 0.00000000001127 72.0
BYD1_k127_3699126_2 SPFH domain / Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 557.0
BYD1_k127_3699126_3 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 383.0
BYD1_k127_3699126_4 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 357.0
BYD1_k127_3699126_5 Unusual protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 358.0
BYD1_k127_3699126_6 TIGRFAM MazG family protein K02428,K04765 - 3.6.1.66,3.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000006817 260.0
BYD1_k127_3699126_7 Metallo-beta-lactamase superfamily K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000003057 254.0
BYD1_k127_3699126_8 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000001008 251.0
BYD1_k127_3699126_9 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000001918 146.0
BYD1_k127_3701791_0 Belongs to the ClpA ClpB family K03696 - - 0.0 1068.0
BYD1_k127_3701791_1 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 301.0
BYD1_k127_3701791_2 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.00000000000000000000000000000000000000000000000000000000000004635 229.0
BYD1_k127_3701791_3 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000009659 209.0
BYD1_k127_3722168_0 RQC K03654 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 517.0
BYD1_k127_3722168_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003813 487.0
BYD1_k127_3722168_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564 1.6.5.3 0.0000000000000000000000000000000000000000223 160.0
BYD1_k127_3722168_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000003902 145.0
BYD1_k127_3722168_12 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000001198 75.0
BYD1_k127_3722168_13 - - - - 0.00000000000007679 81.0
BYD1_k127_3722168_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 475.0
BYD1_k127_3722168_3 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 420.0
BYD1_k127_3722168_4 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 432.0
BYD1_k127_3722168_5 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 345.0
BYD1_k127_3722168_6 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002618 345.0
BYD1_k127_3722168_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000002775 249.0
BYD1_k127_3722168_8 2 iron, 2 sulfur cluster binding K00334,K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000002621 186.0
BYD1_k127_3722168_9 PFAM Endonuclease Exonuclease phosphatase K07004 - - 0.00000000000000000000000000000000000000000000000003436 195.0
BYD1_k127_3730011_0 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009159 556.0
BYD1_k127_3730011_1 Alpha-2-Macroglobulin K06894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 458.0
BYD1_k127_3730011_10 - K05826 - - 0.0000000006841 62.0
BYD1_k127_3730011_11 domain protein K14475 - - 0.00001097 56.0
BYD1_k127_3730011_2 COGs COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 433.0
BYD1_k127_3730011_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000002255 242.0
BYD1_k127_3730011_4 PFAM penicillin-binding protein transpeptidase - - - 0.0000000000000000000000000000000000000000000000000000000004948 222.0
BYD1_k127_3730011_5 Protein of unknown function (DUF1175) K09934 - - 0.000000000000000000000000000000000000000000000000000002616 201.0
BYD1_k127_3730011_6 Domain of unknown function (DUF4349) - - - 0.000000000000000000000000007553 124.0
BYD1_k127_3730011_7 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000002773 106.0
BYD1_k127_3730011_8 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00000000000000006979 89.0
BYD1_k127_3730011_9 von Willebrand factor, type A - - - 0.000000000004741 78.0
BYD1_k127_3742445_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004867 306.0
BYD1_k127_3742445_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744,K09774,K22110 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0009279,GO:0015267,GO:0015288,GO:0015749,GO:0015750,GO:0015751,GO:0015757,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030312,GO:0030313,GO:0031975,GO:0034219,GO:0044462,GO:0044464,GO:0046323,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:1904659 - 0.000000000000000000000004052 114.0
BYD1_k127_3742445_2 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000008634 55.0
BYD1_k127_3784961_0 Peptidase family M28 - - - 0.000000000000000000000000000000000000000001884 161.0
BYD1_k127_3784961_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000005006 115.0
BYD1_k127_3784961_2 PFAM Cyclic nucleotide-binding - - - 0.00000139 59.0
BYD1_k127_3784961_3 self proteolysis - - - 0.000004891 58.0
BYD1_k127_3816856_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 456.0
BYD1_k127_3816856_1 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 349.0
BYD1_k127_3839697_0 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 451.0
BYD1_k127_3839697_1 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 344.0
BYD1_k127_3839697_2 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000001475 145.0
BYD1_k127_3852699_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 338.0
BYD1_k127_3852699_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000002929 171.0
BYD1_k127_3852699_2 Outer membrane lipoprotein - - - 0.0000000000005256 81.0
BYD1_k127_3911825_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 385.0
BYD1_k127_3911825_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002399 278.0
BYD1_k127_3911825_2 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000289 229.0
BYD1_k127_3928260_0 Prolyl oligopeptidase family - - - 2.068e-266 845.0
BYD1_k127_3928260_1 Domain of unknown function (DUF4287) - - - 0.0000000000000000000000000000000000000000000000000000000000000000009552 232.0
BYD1_k127_3928260_2 Proline racemase K01777 - 5.1.1.4 0.0000000000000000000000000000008722 124.0
BYD1_k127_3928260_3 Belongs to the UPF0102 family K07460 - - 0.000000000000000005394 89.0
BYD1_k127_3928260_4 - - - - 0.000007112 48.0
BYD1_k127_3928260_5 - - - - 0.000008247 51.0
BYD1_k127_4001719_0 Sodium:dicarboxylate symporter family K03309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 391.0
BYD1_k127_4001719_1 Major facilitator Superfamily K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 372.0
BYD1_k127_4001719_2 DNA polymerase K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 362.0
BYD1_k127_4001719_3 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 290.0
BYD1_k127_4001719_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003171 286.0
BYD1_k127_4001719_5 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000006384 266.0
BYD1_k127_4001719_6 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000003226 135.0
BYD1_k127_4001719_7 Protein of unknown function (DUF664) - - - 0.00000001973 62.0
BYD1_k127_4041148_0 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 366.0
BYD1_k127_4041148_1 methyltransferase - - - 0.000000000001216 76.0
BYD1_k127_4041148_2 - - - - 0.0001854 49.0
BYD1_k127_4060723_0 extracellular matrix structural constituent - - - 4.047e-203 674.0
BYD1_k127_4060723_1 TonB dependent receptor - - - 8.914e-198 662.0
BYD1_k127_4060723_10 VanZ like family - - - 0.00000000000000000000000000000004414 131.0
BYD1_k127_4060723_11 cell septum assembly - - - 0.0000000000000000000000000002556 133.0
BYD1_k127_4060723_12 - - - - 0.000000000000000709 87.0
BYD1_k127_4060723_13 Tetratricopeptide repeat - - - 0.0005545 52.0
BYD1_k127_4060723_2 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008169 496.0
BYD1_k127_4060723_3 virion core protein (lumpy skin disease virus) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 409.0
BYD1_k127_4060723_4 chaperone-mediated protein folding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 411.0
BYD1_k127_4060723_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006764 301.0
BYD1_k127_4060723_6 Enoyl-CoA hydratase K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003942 272.0
BYD1_k127_4060723_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.00000000000000000000000000000000000000000000009285 172.0
BYD1_k127_4060723_8 Methyltransferase domain - - - 0.000000000000000000000000000000000000000007051 164.0
BYD1_k127_4060723_9 FAD binding domain K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000738 169.0
BYD1_k127_4065463_0 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 2.74e-196 623.0
BYD1_k127_4065463_1 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000131 277.0
BYD1_k127_4065463_2 NADP oxidoreductase coenzyme F420-dependent - - - 0.000000000000000000000000000000000000000000000002087 185.0
BYD1_k127_4065463_3 L-lysine 6-monooxygenase (NADPH-requiring) K00384 - 1.8.1.9 0.0002677 46.0
BYD1_k127_4099179_0 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009462 372.0
BYD1_k127_4099179_1 PFAM Aminotransferase, class I K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000009797 247.0
BYD1_k127_4099179_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000002679 87.0
BYD1_k127_4099179_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00001323 47.0
BYD1_k127_4153863_0 helicase activity - - - 1.454e-280 878.0
BYD1_k127_4153863_1 Zinc-binding dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 434.0
BYD1_k127_4153863_2 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 391.0
BYD1_k127_4153863_3 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 305.0
BYD1_k127_4153863_4 permease K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001415 259.0
BYD1_k127_4191736_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702,K08999 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009314,GO:0009380,GO:0009628,GO:0032991,GO:0042802,GO:0044424,GO:0044464,GO:0050896,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.582e-265 837.0
BYD1_k127_4191736_1 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 497.0
BYD1_k127_4191736_2 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000001504 141.0
BYD1_k127_4191736_3 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000001193 85.0
BYD1_k127_4191736_4 PD-(D/E)XK nuclease superfamily - - - 0.00000000000004158 74.0
BYD1_k127_4191736_5 - - - - 0.00000004316 64.0
BYD1_k127_4229249_0 PFAM Prolyl oligopeptidase family - - - 1.186e-278 871.0
BYD1_k127_4229249_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000001217 256.0
BYD1_k127_4229249_2 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000014 135.0
BYD1_k127_4236626_0 Carboxypeptidase regulatory-like domain - - - 0.0 1225.0
BYD1_k127_4236626_1 hydrolase, family 3 K05349 - 3.2.1.21 8.541e-265 835.0
BYD1_k127_4236626_2 Beta-xylosidase K01198 - 3.2.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006799 574.0
BYD1_k127_4236626_3 Putative glucoamylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 539.0
BYD1_k127_4236626_4 Putative glucoamylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 427.0
BYD1_k127_4236626_5 dioxygenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 295.0
BYD1_k127_4236626_6 Protein of unknown function (DUF1440) K08996 - - 0.00000000000000000000000000000001399 136.0
BYD1_k127_4268185_0 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003285 447.0
BYD1_k127_4268185_1 protein with SCP PR1 domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 366.0
BYD1_k127_4268185_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 331.0
BYD1_k127_4268185_3 Psort location Cytoplasmic, score - - - 0.0000000000000002741 86.0
BYD1_k127_4279280_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1216.0
BYD1_k127_4279280_1 Carbon starvation protein K06200 - - 3.938e-222 706.0
BYD1_k127_4279280_10 DNA-binding transcription factor activity K03892 - - 0.00000000000259 71.0
BYD1_k127_4279280_11 Rhodanese Homology Domain - - - 0.0003166 44.0
BYD1_k127_4279280_12 outer membrane autotransporter barrel domain protein - - - 0.0003446 50.0
BYD1_k127_4279280_2 PFAM Amino acid permease K03294 - - 2.178e-218 692.0
BYD1_k127_4279280_3 cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000001762 203.0
BYD1_k127_4279280_4 Glycine cleavage T-protein C-terminal barrel domain K00605,K06980 - 2.1.2.10 0.00000000000000000000000000000000000000000002556 175.0
BYD1_k127_4279280_5 BioY family K02014,K03523 - - 0.00000000000000000000000000000000000001975 158.0
BYD1_k127_4279280_6 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000001971 144.0
BYD1_k127_4279280_7 PFAM methyltransferase - - - 0.00000000000000000000000000000000006748 140.0
BYD1_k127_4279280_8 deaminated base DNA N-glycosylase activity K21929 - 3.2.2.27 0.0000000000000000000000000000000005835 138.0
BYD1_k127_4279280_9 Universal stress protein family - - - 0.00000000000000002599 93.0
BYD1_k127_4406622_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 5.686e-219 693.0
BYD1_k127_4406622_1 efflux transmembrane transporter activity - - - 1.447e-209 681.0
BYD1_k127_4406622_10 two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005547 401.0
BYD1_k127_4406622_11 Belongs to the arylamine N-acetyltransferase family K00675 - 2.3.1.118 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 326.0
BYD1_k127_4406622_12 phosphorelay sensor kinase activity K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 323.0
BYD1_k127_4406622_13 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008513 308.0
BYD1_k127_4406622_14 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000147 282.0
BYD1_k127_4406622_15 - - - - 0.00000000000000000000000000000000000000000000000000006904 196.0
BYD1_k127_4406622_16 sugar-phosphate isomerases, RpiB LacA LacB family K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000007691 164.0
BYD1_k127_4406622_17 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000002332 166.0
BYD1_k127_4406622_18 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000228 163.0
BYD1_k127_4406622_19 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000004494 155.0
BYD1_k127_4406622_2 HELICc2 K03722 - 3.6.4.12 3.859e-198 636.0
BYD1_k127_4406622_20 Transcriptional regulator PadR-like family - - - 0.00000000000000000000000000000000001886 138.0
BYD1_k127_4406622_21 - - - - 0.0000000000000000000000000000000000514 144.0
BYD1_k127_4406622_22 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000004603 132.0
BYD1_k127_4406622_23 Response regulator receiver - - - 0.0000000000000000000000000009764 117.0
BYD1_k127_4406622_24 Acyltransferase family - - - 0.0000000000000000000004058 109.0
BYD1_k127_4406622_25 Pfam:N_methyl_2 - - - 0.000000000000000005618 90.0
BYD1_k127_4406622_26 COG0500 SAM-dependent methyltransferases K03183 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 2.1.1.163,2.1.1.201 0.000000000000002066 85.0
BYD1_k127_4406622_27 Pfam:N_methyl_2 - - - 0.000000000000007891 81.0
BYD1_k127_4406622_28 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000007758 65.0
BYD1_k127_4406622_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 563.0
BYD1_k127_4406622_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 561.0
BYD1_k127_4406622_5 PFAM Type II secretion system protein E K02454,K02504,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 496.0
BYD1_k127_4406622_6 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 481.0
BYD1_k127_4406622_7 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 459.0
BYD1_k127_4406622_8 sigma-54 factor interaction domain-containing protein K02667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004329 420.0
BYD1_k127_4406622_9 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 402.0
BYD1_k127_4408648_0 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 525.0
BYD1_k127_4408648_1 AcrB/AcrD/AcrF family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 336.0
BYD1_k127_4423036_0 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009161 612.0
BYD1_k127_4423036_1 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000003656 209.0
BYD1_k127_4433672_0 4Fe-4S dicluster domain K00184 - - 0.0 1087.0
BYD1_k127_4433672_1 GHMP kinases C terminal K07031 - 2.7.1.168 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 293.0
BYD1_k127_4433672_2 Cytochrome c7 and related cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000124 277.0
BYD1_k127_4433672_3 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000801 266.0
BYD1_k127_4433672_4 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000004106 201.0
BYD1_k127_4433672_5 Phosphoribosyl transferase domain K00762 - 2.4.2.10 0.0000000000000000000000000000000000000006347 155.0
BYD1_k127_4433672_6 Universal stress protein - - - 0.000000000000000000000002348 108.0
BYD1_k127_4433672_7 Belongs to the Nudix hydrolase family - - - 0.0000000000000000000281 96.0
BYD1_k127_4433672_8 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.0000000000000000005972 88.0
BYD1_k127_4433672_9 FtsZ-dependent cytokinesis - - - 0.00000000000000374 84.0
BYD1_k127_4433962_0 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000797 570.0
BYD1_k127_4433962_1 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000001922 239.0
BYD1_k127_4433962_2 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000000000000000000000006908 217.0
BYD1_k127_4433962_3 SCO1/SenC K07152,K08976 - - 0.0000000000000000000000000000000000000000000000000000000009659 209.0
BYD1_k127_4461964_0 Belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 505.0
BYD1_k127_4461964_1 Amidohydrolase family K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 477.0
BYD1_k127_4461964_2 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 429.0
BYD1_k127_4469723_0 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002762 565.0
BYD1_k127_4469723_1 ABC transporter K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 356.0
BYD1_k127_4469723_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 360.0
BYD1_k127_4469723_3 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 316.0
BYD1_k127_4469723_4 Transcriptional regulatory protein, C terminal - - - 0.000000000000000003981 98.0
BYD1_k127_4479516_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 415.0
BYD1_k127_4479516_1 Belongs to the ABC transporter superfamily K02010,K10112 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 377.0
BYD1_k127_4479516_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005416 362.0
BYD1_k127_4479516_3 radical SAM domain protein K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 357.0
BYD1_k127_4479516_4 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001038 272.0
BYD1_k127_4479516_5 Homoserine dehydrogenase, NAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003357 271.0
BYD1_k127_4479516_6 helix_turn_helix gluconate operon transcriptional repressor K07978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002435 251.0
BYD1_k127_4479516_7 Xylose isomerase-like TIM barrel K06606 - 5.3.99.11 0.00000000000000000000000000000000000000000000000000000000006676 216.0
BYD1_k127_4479516_8 Cytochrome c - - - 0.0000000000000001901 86.0
BYD1_k127_4479516_9 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000002944 79.0
BYD1_k127_4503907_0 Cys/Met metabolism PLP-dependent enzyme K01760,K17217 - 4.4.1.1,4.4.1.2,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007007 501.0
BYD1_k127_4503907_1 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000001713 115.0
BYD1_k127_4503907_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000008948 51.0
BYD1_k127_4509681_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 565.0
BYD1_k127_4509681_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 311.0
BYD1_k127_4509681_2 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000002048 247.0
BYD1_k127_4509681_3 Peptidase family M23 K21472 - - 0.000000000000000000000000000000000000000000000001284 184.0
BYD1_k127_4509681_4 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000001208 153.0
BYD1_k127_4509681_5 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000008773 147.0
BYD1_k127_4509681_6 ErfK ybiS ycfS ynhG family protein K16291 - - 0.00000000000000149 88.0
BYD1_k127_4649511_0 Gamma-glutamyltranspeptidase K00681 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006082,GO:0006508,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008242,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0019538,GO:0019752,GO:0030288,GO:0030313,GO:0031975,GO:0034722,GO:0036374,GO:0042597,GO:0043094,GO:0043102,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0070011,GO:0071704,GO:0097264,GO:0140096,GO:1901564,GO:1901566,GO:1901576 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 556.0
BYD1_k127_4649511_1 4Fe-4S binding domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 336.0
BYD1_k127_4649511_2 Protein of unknown function (DUF433) - - - 0.0000000000000000000000000002368 117.0
BYD1_k127_4649511_3 - - - - 0.000000000000000000000003431 104.0
BYD1_k127_4649511_4 Phosphonate metabolism K06162 - 3.6.1.63 0.00000002364 56.0
BYD1_k127_4665651_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 572.0
BYD1_k127_4665651_1 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 480.0
BYD1_k127_4665651_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 366.0
BYD1_k127_4665651_3 Belongs to the ATCase OTCase family K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0043857,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 318.0
BYD1_k127_4665651_4 Belongs to the NAGSA dehydrogenase family. Type 1 subfamily K00145,K05829 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000002073 274.0
BYD1_k127_4665651_5 Mo-molybdopterin cofactor biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001129 270.0
BYD1_k127_4665651_6 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000002893 145.0
BYD1_k127_4665651_7 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000003255 134.0
BYD1_k127_4665651_8 Regulates arginine biosynthesis genes K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000001624 93.0
BYD1_k127_4673532_0 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008148 537.0
BYD1_k127_4673532_1 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 441.0
BYD1_k127_4673532_2 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009667 398.0
BYD1_k127_4673532_3 Methionine biosynthesis protein MetW K18827 - 2.1.1.294,2.7.1.181 0.0000000000000000000000000000000000000000000000000000000000000000001966 248.0
BYD1_k127_4673532_4 cellulose binding - - - 0.000000000000000000000000005224 128.0
BYD1_k127_4673532_5 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000007678 109.0
BYD1_k127_4673532_6 3-demethylubiquinone-9 3-O-methyltransferase activity K00568,K18827 - 2.1.1.222,2.1.1.294,2.1.1.64,2.7.1.181 0.00000000001559 77.0
BYD1_k127_4685416_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 371.0
BYD1_k127_4685416_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 352.0
BYD1_k127_4685416_2 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 346.0
BYD1_k127_4685416_3 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000002129 110.0
BYD1_k127_4685416_4 Ribosomal L32p protein family K02911 - - 0.000000000000000000001134 95.0
BYD1_k127_4685416_5 Cytoplasmic, score 8.87 K07040 - - 0.0000000000005533 69.0
BYD1_k127_4685416_6 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 0.00000000002812 64.0
BYD1_k127_4691574_0 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 616.0
BYD1_k127_4691574_1 ketoglutarate semialdehyde dehydrogenase K14519 - 1.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007866 600.0
BYD1_k127_4691574_10 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000002845 222.0
BYD1_k127_4691574_11 BFD domain protein 2Fe-2S -binding domain protein - - - 0.000000000000000000000000000000000000000000000000000001147 195.0
BYD1_k127_4691574_12 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K01611 - 4.1.1.50 0.00000000000000000000000000000002608 133.0
BYD1_k127_4691574_13 Transglycosylase associated protein - - - 0.000000000000000000001118 97.0
BYD1_k127_4691574_14 Domain of Unknown Function (DUF350) - - - 0.00000008257 58.0
BYD1_k127_4691574_2 NAD(P)-binding Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002118 544.0
BYD1_k127_4691574_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 500.0
BYD1_k127_4691574_4 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003177 498.0
BYD1_k127_4691574_5 UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 499.0
BYD1_k127_4691574_6 Dihydrodipicolinate synthetase family K21062 - 3.5.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 424.0
BYD1_k127_4691574_7 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007724 400.0
BYD1_k127_4691574_8 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000689 350.0
BYD1_k127_4691574_9 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000602 265.0
BYD1_k127_4713580_0 Acyl transferase domain in polyketide synthase (PKS) enzymes. - - - 7.667e-297 927.0
BYD1_k127_4717216_0 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 604.0
BYD1_k127_4717216_1 DeoC/LacD family aldolase K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002461 567.0
BYD1_k127_4717216_10 Metallo-beta-lactamase superfamily - GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 - 0.0000000000000000000000000000000000000000000000000000002827 201.0
BYD1_k127_4717216_11 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000003875 183.0
BYD1_k127_4717216_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000003959 163.0
BYD1_k127_4717216_13 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000008884 149.0
BYD1_k127_4717216_14 Uncharacterized protein family UPF0016 - - - 0.000000000000000000000000924 106.0
BYD1_k127_4717216_15 Anti-sigma-K factor rskA - - - 0.00000000000000000000009752 108.0
BYD1_k127_4717216_16 SnoaL-like domain - - - 0.00001526 54.0
BYD1_k127_4717216_2 Radical SAM superfamily K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 480.0
BYD1_k127_4717216_3 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 373.0
BYD1_k127_4717216_4 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 341.0
BYD1_k127_4717216_5 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005761 324.0
BYD1_k127_4717216_6 VIT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 307.0
BYD1_k127_4717216_7 oxidoreductase activity K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002058 285.0
BYD1_k127_4717216_8 ThiC-associated domain K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000006536 268.0
BYD1_k127_4717216_9 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000001445 218.0
BYD1_k127_4725910_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000513 497.0
BYD1_k127_4725910_1 pfam abc K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 303.0
BYD1_k127_4725910_2 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000007186 260.0
BYD1_k127_4725910_3 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000001489 207.0
BYD1_k127_4725910_4 COG1668 ABC-type Na efflux pump, permease component K01992 - - 0.00000000000000000000000000000000004105 147.0
BYD1_k127_4735256_0 Prolyl oligopeptidase family - - - 5.77e-199 642.0
BYD1_k127_4735256_1 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006726 311.0
BYD1_k127_4735256_10 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000001983 91.0
BYD1_k127_4735256_11 Tetratricopeptide repeat - - - 0.00001205 56.0
BYD1_k127_4735256_2 thioesterase involved in non-ribosomal peptide biosynthesis K01071 - 3.1.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000005041 261.0
BYD1_k127_4735256_3 Alpha-tubulin suppressor and related RCC1 domain-containing proteins - - - 0.00000000000000000000000000000000000000000000000000000000000004524 245.0
BYD1_k127_4735256_4 Domain of unknown function (DUF4162) K01990 - - 0.0000000000000000000000000000000000000000000000000000000007809 214.0
BYD1_k127_4735256_5 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000004201 165.0
BYD1_k127_4735256_6 MbtH-like protein K05375 - - 0.000000000000000000000000000000000002607 138.0
BYD1_k127_4735256_7 Subtilase family - - - 0.000000000000000000000000000004071 140.0
BYD1_k127_4735256_8 PFAM peptidase M15B and M15C DD-carboxypeptidase VanY endolysin - - - 0.000000000000000000000000000004123 131.0
BYD1_k127_4735256_9 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000003553 117.0
BYD1_k127_4742162_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 505.0
BYD1_k127_4742162_1 beta-fructofuranosidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005047 332.0
BYD1_k127_4742162_2 transferase activity, transferring glycosyl groups K00713,K06338 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001997 273.0
BYD1_k127_4742162_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000005836 254.0
BYD1_k127_4742162_4 shikimate 3-dehydrogenase (NADP+) activity K00014,K13832 GO:0000166,GO:0003674,GO:0003824,GO:0003855,GO:0004764,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0016829,GO:0016835,GO:0016836,GO:0019632,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050661,GO:0050662,GO:0055114,GO:0071704,GO:0097159,GO:1901265,GO:1901363,GO:1901576,GO:1901615 1.1.1.25,4.2.1.10 0.000000000000000000000000000000000000000000000000000001535 201.0
BYD1_k127_4742162_5 transferase activity, transferring glycosyl groups K05946,K16701 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008194,GO:0008378,GO:0008610,GO:0008653,GO:0008921,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035250,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.187 0.0000000000000000000000000000000000000000000003609 181.0
BYD1_k127_4742162_6 Endoribonuclease L-PSP - - - 0.000000000000000000000000000003967 132.0
BYD1_k127_4742162_7 low molecular weight K01104,K20201 - 3.1.3.48,3.9.1.2 0.000000000000000000009133 107.0
BYD1_k127_4742162_8 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.0000000003747 73.0
BYD1_k127_4754306_0 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 372.0
BYD1_k127_4754306_1 - - - - 0.00000000000000000000000000003258 128.0
BYD1_k127_4754306_2 - - - - 0.0009216 50.0
BYD1_k127_4760778_0 Peptidase family M28 - - - 1.651e-207 660.0
BYD1_k127_4760778_1 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168,K07479 GO:0003674,GO:0003824,GO:0003916,GO:0003917,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000005609 239.0
BYD1_k127_4843934_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 565.0
BYD1_k127_4843934_1 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 485.0
BYD1_k127_4843934_10 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000002609 265.0
BYD1_k127_4843934_11 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000002754 262.0
BYD1_k127_4843934_12 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000006814 256.0
BYD1_k127_4843934_13 PFAM Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000003243 235.0
BYD1_k127_4843934_14 TIGRFAM phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000001891 231.0
BYD1_k127_4843934_15 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000003369 216.0
BYD1_k127_4843934_16 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000003463 221.0
BYD1_k127_4843934_17 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000002249 188.0
BYD1_k127_4843934_18 HisG, C-terminal domain K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000007276 183.0
BYD1_k127_4843934_19 TIGRFAM Diguanylate cyclase K21022 - 2.7.7.65 0.00000000000000000000000000000000001802 148.0
BYD1_k127_4843934_2 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 483.0
BYD1_k127_4843934_20 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000002059 139.0
BYD1_k127_4843934_21 Ankyrin repeat K06867 - - 0.000000000000000000000003474 114.0
BYD1_k127_4843934_3 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 GO:0000162,GO:0003674,GO:0003824,GO:0004049,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016829,GO:0016830,GO:0016833,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 448.0
BYD1_k127_4843934_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 421.0
BYD1_k127_4843934_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 363.0
BYD1_k127_4843934_6 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000439 306.0
BYD1_k127_4843934_7 oxidoreductase activity, acting on CH-OH group of donors K13237 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009884 297.0
BYD1_k127_4843934_8 Inositol monophosphatase family K01092,K05602 - 3.1.3.15,3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 288.0
BYD1_k127_4843934_9 Peptidase C26 K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001711 273.0
BYD1_k127_4902999_0 PFAM Aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.247e-195 621.0
BYD1_k127_4902999_1 DNA polymerase beta thumb K02347 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 547.0
BYD1_k127_4902999_10 - - - - 0.0000000008915 68.0
BYD1_k127_4902999_2 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001963 492.0
BYD1_k127_4902999_3 Monooxygenase fad-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 468.0
BYD1_k127_4902999_4 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000003525 233.0
BYD1_k127_4902999_5 - - - - 0.0000000000000000000000000000000000000000000000000000000004409 211.0
BYD1_k127_4902999_6 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000000000000000000000001085 186.0
BYD1_k127_4902999_7 EamA-like transporter family K07790 - - 0.000000000000000000000000000000000000000000000001436 184.0
BYD1_k127_4902999_8 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.0000000000000000000000000000000000000000000000899 174.0
BYD1_k127_4902999_9 cAMP biosynthetic process - - - 0.000000000000000000000009303 117.0
BYD1_k127_4906201_0 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006117 322.0
BYD1_k127_4906201_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000006119 216.0
BYD1_k127_4906201_2 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000001453 178.0
BYD1_k127_4906201_3 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000004982 148.0
BYD1_k127_4906201_4 transcriptional regulator K03655 - 3.6.4.12 0.0000000000000000000000000000001013 139.0
BYD1_k127_4906201_5 - K01992 - - 0.000000000000002035 90.0
BYD1_k127_4912869_0 PFAM FAD dependent oxidoreductase - - - 1.228e-213 674.0
BYD1_k127_4912869_1 heat shock protein binding K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 340.0
BYD1_k127_4912869_10 Gas vesicle synthesis protein GvpL/GvpF - - - 0.0000000000000000002298 96.0
BYD1_k127_4912869_11 gas vesicle protein - - - 0.0000000000005972 70.0
BYD1_k127_4912869_13 - - - - 0.0000000001483 63.0
BYD1_k127_4912869_14 - - - - 0.00008172 47.0
BYD1_k127_4912869_2 CHASE3 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006643 274.0
BYD1_k127_4912869_3 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000001495 219.0
BYD1_k127_4912869_4 TIGRFAM arsenite-activated ATPase (arsA) K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000002218 226.0
BYD1_k127_4912869_5 Arsenical pump-driving ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000004409 204.0
BYD1_k127_4912869_6 Gas vesicle synthesis protein GvpL/GvpF - - - 0.0000000000000000000000000000000001064 145.0
BYD1_k127_4912869_7 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.0000000000000000000000000000007303 124.0
BYD1_k127_4912869_8 Gas vesicle protein K - - - 0.0000000000000000000000000002931 117.0
BYD1_k127_4912869_9 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.0000000000000000000000000005433 117.0
BYD1_k127_4921926_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 402.0
BYD1_k127_4921926_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 406.0
BYD1_k127_4921926_2 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 409.0
BYD1_k127_4962116_0 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 600.0
BYD1_k127_4962116_1 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 335.0
BYD1_k127_4962116_2 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 306.0
BYD1_k127_4962116_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005846 266.0
BYD1_k127_4962116_4 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000002704 231.0
BYD1_k127_4962116_5 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000001015 194.0
BYD1_k127_4962116_6 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000002022 179.0
BYD1_k127_4962116_7 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000002418 177.0
BYD1_k127_497957_0 Carboxyl transferase domain - - - 6.434e-243 760.0
BYD1_k127_497957_1 Acyclic terpene utilisation family protein AtuA - - - 8.059e-212 666.0
BYD1_k127_497957_2 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 378.0
BYD1_k127_497957_3 Zn peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000002263 228.0
BYD1_k127_497957_4 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000491 213.0
BYD1_k127_497957_5 B12 binding domain K01849 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000002484 204.0
BYD1_k127_497957_6 - - - - 0.0000000000000000000000000000000000000000949 160.0
BYD1_k127_497957_7 PFAM thioesterase superfamily K07107 - - 0.0000000000000000000000000000000000005005 146.0
BYD1_k127_4993001_0 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679,K01744 - 4.2.1.2,4.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 591.0
BYD1_k127_4993001_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 452.0
BYD1_k127_4993001_2 KaiC K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 361.0
BYD1_k127_4993001_3 Transcriptional coactivator pterin dehydratase K01724 - 4.2.1.96 0.000000000000000000000000000000000000000000000007812 175.0
BYD1_k127_4993001_4 Cation transport regulator - - - 0.00000000000000000000000000000000000000000000002705 176.0
BYD1_k127_4993001_5 DinB superfamily - - - 0.00000000000000000000000000000000000008396 147.0
BYD1_k127_4993001_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000004332 145.0
BYD1_k127_4993001_7 4Fe-4S single cluster domain of Ferredoxin I - - - 0.0000000000000000000000000009688 113.0
BYD1_k127_4993001_8 (Rieske (2Fe-2S) domain) K00363,K05710 - 1.7.1.15 0.0000000000000000007797 94.0
BYD1_k127_4993001_9 Belongs to the UPF0337 (CsbD) family - - - 0.0000008603 53.0
BYD1_k127_5036936_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005682 578.0
BYD1_k127_5036936_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000001578 258.0
BYD1_k127_5036936_2 EamA-like transporter family - - - 0.0000000000000000000000000000000001885 145.0
BYD1_k127_5036936_4 metallocarboxypeptidase activity - - - 0.000002438 49.0
BYD1_k127_5078275_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003513 400.0
BYD1_k127_5078275_1 Tetratricopeptide repeat K09527 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0030544,GO:0031072,GO:0051084,GO:0051085,GO:0061077 - 0.00000000000001022 82.0
BYD1_k127_5078275_2 IMP dehydrogenase activity - - - 0.00000000000002182 76.0
BYD1_k127_5078275_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000004439 56.0
BYD1_k127_5134838_0 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 604.0
BYD1_k127_5134838_1 Aconitase C-terminal domain K01703 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 489.0
BYD1_k127_5134838_10 HEAT repeats - - - 0.0000000000000000000000002366 121.0
BYD1_k127_5134838_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000002643 80.0
BYD1_k127_5134838_12 PBS lyase HEAT-like repeat - - - 0.000002342 60.0
BYD1_k127_5134838_13 Putative zinc-finger - - - 0.0002811 52.0
BYD1_k127_5134838_2 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 481.0
BYD1_k127_5134838_3 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 416.0
BYD1_k127_5134838_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 353.0
BYD1_k127_5134838_5 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000203 288.0
BYD1_k127_5134838_6 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001214 281.0
BYD1_k127_5134838_7 oxidoreductase activity - - - 0.00000000000000000000000000000000000000000000000000000000004214 220.0
BYD1_k127_5134838_8 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000002519 182.0
BYD1_k127_5134838_9 amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000005342 158.0
BYD1_k127_5137650_0 Penicillin-binding protein, dimerisation domain K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 458.0
BYD1_k127_5137650_1 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 306.0
BYD1_k127_5137650_10 Methanol dehydrogenase K06872 - - 0.000000000000000000000000006922 123.0
BYD1_k127_5137650_11 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.00000000000000000000003415 101.0
BYD1_k127_5137650_12 Ethanolamine utilisation protein EutN/carboxysome K04028 GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0033554,GO:0050896,GO:0051716 - 0.000000000001243 70.0
BYD1_k127_5137650_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic - - - 0.00006222 50.0
BYD1_k127_5137650_2 ZIP Zinc transporter K07238,K16267 - - 0.000000000000000000000000000000000000000000000000000000000001563 218.0
BYD1_k127_5137650_3 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000009966 214.0
BYD1_k127_5137650_4 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000002324 193.0
BYD1_k127_5137650_5 Belongs to the MraZ family K03925 - - 0.00000000000000000000000000000000000000000000001744 175.0
BYD1_k127_5137650_6 LemA family K03744 - - 0.0000000000000000000000000000000000000000000004629 173.0
BYD1_k127_5137650_7 BMC K04027 - - 0.0000000000000000000000000000000002596 133.0
BYD1_k127_5137650_8 nucleotidyltransferase activity - - - 0.000000000000000000000000000000001331 139.0
BYD1_k127_5137650_9 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028,K08697 - - 0.00000000000000000000000000007462 117.0
BYD1_k127_5139340_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 1.132e-269 848.0
BYD1_k127_5139340_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 1.532e-250 797.0
BYD1_k127_5139340_2 [2Fe-2S] binding domain - - - 0.0000000000000000000000000000000000000000000000000000007135 198.0
BYD1_k127_5139340_3 Amino-transferase class IV - - - 0.00000000000000000000000000000003041 136.0
BYD1_k127_5139340_4 PFAM Alkyl hydroperoxide reductase - - - 0.000000007817 60.0
BYD1_k127_5143526_0 Beta-eliminating lyase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 396.0
BYD1_k127_5143526_1 Methionine biosynthesis protein MetW K00570 - 2.1.1.17,2.1.1.71 0.000000000000001179 84.0
BYD1_k127_5154492_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.778e-295 922.0
BYD1_k127_5154492_1 PLD-like domain - - - 0.00000215 58.0
BYD1_k127_5177220_0 Mur ligase middle domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000003643 162.0
BYD1_k127_5177220_1 belongs to the CobB CobQ family K00625 - 2.3.1.8 0.0000000000000000000000000000000009735 136.0
BYD1_k127_5177220_2 Protein of unknown function (DUF1232) - - - 0.000000000000000000000001243 111.0
BYD1_k127_5177220_3 domain in sensory proteins (DUF2308) - - - 0.00000479 55.0
BYD1_k127_5177817_0 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 1.638e-234 741.0
BYD1_k127_5177817_1 Deoxyhypusine synthase K00809 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008612,GO:0009058,GO:0009987,GO:0010467,GO:0016740,GO:0016765,GO:0018193,GO:0018205,GO:0019538,GO:0034038,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0051604,GO:0071704,GO:1901564 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002359 283.0
BYD1_k127_5177817_2 PFAM X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000002233 190.0
BYD1_k127_5203669_0 Dienelactone hydrolase family - - - 9.725e-315 979.0
BYD1_k127_5203669_1 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000587 482.0
BYD1_k127_5203669_2 Aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 370.0
BYD1_k127_5203669_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008373 288.0
BYD1_k127_5203669_4 DinB family - - - 0.000000000000000000000000000000000000000000008765 169.0
BYD1_k127_5203669_5 methyltransferase K18846 - 2.1.1.180 0.00000000000000000000000000003027 124.0
BYD1_k127_5203669_7 Protein of unknown function (DUF664) - - - 0.000000000004851 66.0
BYD1_k127_5203669_8 KR domain K00059 - 1.1.1.100 0.0000003716 51.0
BYD1_k127_5203669_9 Outer membrane protein (OmpH-like) K06142 - - 0.000001254 58.0
BYD1_k127_5285935_0 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 602.0
BYD1_k127_5285935_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005587 542.0
BYD1_k127_5285935_10 Protein-disulfide isomerase - - - 0.00000000000000000000000000000000003201 144.0
BYD1_k127_5285935_11 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000008222 102.0
BYD1_k127_5285935_12 Domain of unknown function (DUF4870) - - - 0.00000000000000000000183 99.0
BYD1_k127_5285935_13 Thioesterase superfamily K07107 - - 0.000000000000000000002138 99.0
BYD1_k127_5285935_14 VKc - - - 0.00000009377 59.0
BYD1_k127_5285935_15 Protein of unknown function (DUF4019) - - - 0.0001379 53.0
BYD1_k127_5285935_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 512.0
BYD1_k127_5285935_3 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 452.0
BYD1_k127_5285935_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 360.0
BYD1_k127_5285935_5 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 332.0
BYD1_k127_5285935_6 Oxidoreductase, molybdopterin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 290.0
BYD1_k127_5285935_7 Ndr family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001125 254.0
BYD1_k127_5285935_8 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000000000000000000002596 223.0
BYD1_k127_5285935_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000003103 223.0
BYD1_k127_5350705_0 Sodium:solute symporter family - - - 5.529e-215 685.0
BYD1_k127_5350705_1 Alpha/beta hydrolase family - - - 3.108e-205 660.0
BYD1_k127_5350705_10 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000001412 196.0
BYD1_k127_5350705_11 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000009444 90.0
BYD1_k127_5350705_12 Bacterial regulatory proteins, gntR family - - - 0.00000001359 61.0
BYD1_k127_5350705_13 energy transducer activity K03832 - - 0.0002245 53.0
BYD1_k127_5350705_2 PFAM AMP-dependent synthetase and ligase K01904 - 6.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007536 563.0
BYD1_k127_5350705_3 Peptidase family S58 K01266 - 3.4.11.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 513.0
BYD1_k127_5350705_4 Alpha amylase, catalytic domain K06044 - 5.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 417.0
BYD1_k127_5350705_5 ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 414.0
BYD1_k127_5350705_6 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 338.0
BYD1_k127_5350705_7 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 296.0
BYD1_k127_5350705_8 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009553 295.0
BYD1_k127_5350705_9 ROK family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000001343 227.0
BYD1_k127_535645_0 Tricorn protease C1 domain K08676 - - 0.0 1233.0
BYD1_k127_535645_1 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 1.808e-233 735.0
BYD1_k127_535645_2 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000001174 74.0
BYD1_k127_5379502_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000008676 235.0
BYD1_k127_5379502_1 protein kinase related protein - - - 0.0000000000000000000000000000000000000000000000000000000002128 209.0
BYD1_k127_5379502_2 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000007626 132.0
BYD1_k127_5388151_0 serine-type peptidase activity - - - 5.43e-204 643.0
BYD1_k127_5388151_1 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000008612 274.0
BYD1_k127_5388151_2 LytTr DNA-binding domain K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009958 254.0
BYD1_k127_5388151_3 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000004492 177.0
BYD1_k127_5388151_4 ThiF family K21029,K21147 - 2.7.7.80,2.8.1.11 0.00000003833 54.0
BYD1_k127_5389651_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 367.0
BYD1_k127_5389651_1 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000003468 246.0
BYD1_k127_5389651_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000001637 186.0
BYD1_k127_5397820_0 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 312.0
BYD1_k127_5397820_1 PFAM glycosyl transferase family 2 - - - 0.000000000000000000000000000000000008589 147.0
BYD1_k127_5409319_0 cellulase activity - - - 0.0000000000000000000000000000000000001509 161.0
BYD1_k127_5415418_0 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 3.72e-196 625.0
BYD1_k127_5415418_1 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 594.0
BYD1_k127_5415418_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 439.0
BYD1_k127_5415418_3 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 372.0
BYD1_k127_5415418_4 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 328.0
BYD1_k127_5415418_5 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002452 276.0
BYD1_k127_5415418_6 Subtilase family - - - 0.0000000000000000000000000000000000000000000000000000000000000007711 233.0
BYD1_k127_5439475_0 enterobactin catabolic process - - - 1.984e-212 663.0
BYD1_k127_5439475_1 PFAM FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 328.0
BYD1_k127_5497249_0 IgA Peptidase M64 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 462.0
BYD1_k127_5497249_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 299.0
BYD1_k127_5498780_0 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 466.0
BYD1_k127_5498780_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007356 322.0
BYD1_k127_5498780_2 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007983 297.0
BYD1_k127_5498780_3 deoxyhypusine monooxygenase activity K05385 - - 0.000000000000000001675 93.0
BYD1_k127_5498780_4 sigma54 specific, transcriptional regulator, Fis family - - - 0.0001912 48.0
BYD1_k127_551297_0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 3.17e-198 625.0
BYD1_k127_551297_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 546.0
BYD1_k127_551297_2 Permease, YjgP YjgQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007294 295.0
BYD1_k127_551297_3 Involved in DNA repair and RecF pathway recombination K03474,K03584 GO:0008150,GO:0009314,GO:0009628,GO:0050896 2.6.99.2 0.0000000000000000000000000000000000003144 149.0
BYD1_k127_551297_4 - - - - 0.00000000000005432 78.0
BYD1_k127_5546183_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 3.461e-250 800.0
BYD1_k127_5546183_1 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 454.0
BYD1_k127_5546183_2 COGs COG4299 conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 402.0
BYD1_k127_5546183_3 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008265 309.0
BYD1_k127_5546183_4 Alpha-aspartyl dipeptidase-like K05995 GO:0003674,GO:0003824,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0071704,GO:0140096,GO:1901564 3.4.13.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000424 281.0
BYD1_k127_5562153_0 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 401.0
BYD1_k127_5562153_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003752 266.0
BYD1_k127_5562153_3 - - - - 0.0000000000000000000000000000000000000000000000000000001726 197.0
BYD1_k127_5562153_4 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.000000000000000000000000000000000000000002987 160.0
BYD1_k127_5562153_5 O-methyltransferase activity - - - 0.00000000000000000000000000000001496 136.0
BYD1_k127_5562153_6 Glycosyl transferase, family 2 - - - 0.000000005452 67.0
BYD1_k127_5562153_7 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 GO:0003674,GO:0003824,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008289,GO:0008689,GO:0008757,GO:0009058,GO:0009108,GO:0009628,GO:0009651,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0042538,GO:0043167,GO:0043168,GO:0043431,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0051188,GO:0061542,GO:0071704,GO:1901576,GO:1901611,GO:1901661,GO:1901663 2.1.1.222,2.1.1.64 0.0000225 56.0
BYD1_k127_5566899_0 Sortilin, neurotensin receptor 3, - - - 0.0 1429.0
BYD1_k127_5566899_1 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007327 417.0
BYD1_k127_5566899_2 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000005684 105.0
BYD1_k127_5566899_3 NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000008041 66.0
BYD1_k127_562910_0 GTP-binding protein TypA K06207 - - 5.042e-256 801.0
BYD1_k127_562910_1 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 426.0
BYD1_k127_562910_2 COG1230 Co Zn Cd efflux system component K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001148 268.0
BYD1_k127_562910_3 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000003435 220.0
BYD1_k127_562910_4 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.000000000000000000000000000000000000000000000000001241 186.0
BYD1_k127_562910_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000001527 160.0
BYD1_k127_562910_6 zinc-ribbon domain - - - 0.000000000001387 78.0
BYD1_k127_562910_7 general secretion pathway protein K02456,K02650 - - 0.00000271 57.0
BYD1_k127_5751899_0 ABC transporter K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 488.0
BYD1_k127_5751899_1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 411.0
BYD1_k127_5751899_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001151 260.0
BYD1_k127_5751899_3 YicC domain protein - - - 0.000000000000000000000000000000000000000000000000000000001527 211.0
BYD1_k127_5751899_4 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000002058 205.0
BYD1_k127_5751899_5 response regulator receiver K02483,K07658 - - 0.0000000000000000000000000000000000000000000000000000001248 203.0
BYD1_k127_5751899_6 chlorophyll binding - - - 0.000000000000000000000000000000000000000000001915 183.0
BYD1_k127_5751899_7 phosphorelay signal transduction system K03413 - - 0.00000000000001479 78.0
BYD1_k127_5751899_8 DNA-directed 5'-3' RNA polymerase activity K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030312,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0071944,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.00001192 52.0
BYD1_k127_576667_0 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004892 503.0
BYD1_k127_576667_1 Belongs to the CinA family K03742 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 396.0
BYD1_k127_576667_2 molybdenum ion binding K07140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 326.0
BYD1_k127_576667_3 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009843 306.0
BYD1_k127_576667_4 Glycerol-3-phosphate acyltransferase K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000001377 166.0
BYD1_k127_576667_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000001514 159.0
BYD1_k127_5819686_0 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 580.0
BYD1_k127_5819686_1 Domain of unknown function (DUF3471) K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 340.0
BYD1_k127_5819686_2 Amidohydrolase family K06015 - 3.5.1.81 0.000000000000000000000000000000000000000000000000000000000000000006686 228.0
BYD1_k127_5826524_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 1.689e-247 781.0
BYD1_k127_5826524_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 406.0
BYD1_k127_5826524_2 PFAM Peptidase M19, renal dipeptidase K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 309.0
BYD1_k127_5826524_3 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000006033 246.0
BYD1_k127_5826524_4 Type II/IV secretion system protein K02669 - - 0.00000000000000000000000000000000000000000000003136 174.0
BYD1_k127_583515_0 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003645 424.0
BYD1_k127_583515_1 PFAM ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 299.0
BYD1_k127_583515_2 O-acyltransferase activity - - - 0.000000000000000000000000000001825 130.0
BYD1_k127_5875262_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 483.0
BYD1_k127_5875262_1 transferase activity, transferring glycosyl groups K16150 - 2.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 364.0
BYD1_k127_5875262_2 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000039 287.0
BYD1_k127_5875262_3 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001938 285.0
BYD1_k127_5875262_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001736 268.0
BYD1_k127_5875262_5 Methyltransferase FkbM domain - - - 0.000000000000000000000000000000000000000000000000000000000007917 217.0
BYD1_k127_5875262_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000001595 180.0
BYD1_k127_5875262_7 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000001754 143.0
BYD1_k127_5875262_8 aminoglycoside 3-N-acetyltransferase K00662 - 2.3.1.81 0.00000000000000000000000000002619 128.0
BYD1_k127_5875262_9 Gram-negative-bacterium-type cell wall biogenesis - - - 0.0000000006331 68.0
BYD1_k127_5877717_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 329.0
BYD1_k127_5877717_1 Belongs to the UbiD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 286.0
BYD1_k127_5877717_2 AcrB/AcrD/AcrF family K03296 - - 0.000000000000000000000000000000000000000000000000000000000000000000001085 261.0
BYD1_k127_5877717_3 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000007313 229.0
BYD1_k127_5877717_4 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000007141 217.0
BYD1_k127_5881651_0 Sugar (and other) transporter - - - 3.322e-216 680.0
BYD1_k127_5881651_1 Peptidase family M28 K06016 - 3.5.1.6,3.5.1.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005149 566.0
BYD1_k127_5881651_2 Domain of unknown function (DUF4070) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 490.0
BYD1_k127_5881651_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005244 363.0
BYD1_k127_5881651_4 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003334 271.0
BYD1_k127_5881651_5 Transmembrane secretion effector K08225 - - 0.00000000000000000000000000000000000000002018 158.0
BYD1_k127_5881651_6 peptidyl-tyrosine sulfation - - - 0.00000003014 66.0
BYD1_k127_5887819_0 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 406.0
BYD1_k127_5887819_1 von Willebrand factor, type A - - - 0.00000000000000000000000000001748 131.0
BYD1_k127_5887819_2 Sulfotransferase family - - - 0.000000008468 68.0
BYD1_k127_5889551_0 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 7.663e-250 790.0
BYD1_k127_5889551_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 1.297e-206 666.0
BYD1_k127_5889551_10 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.00000000000000000000000007187 112.0
BYD1_k127_5889551_11 Predicted nucleotidyltransferase K07074 - - 0.0000000000000000000000001349 121.0
BYD1_k127_5889551_12 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000001846 91.0
BYD1_k127_5889551_13 PFAM Biopolymer transport protein ExbD TolR K03559,K03560 - - 0.0000000000000004167 84.0
BYD1_k127_5889551_14 Tetratricopeptide repeat - - - 0.00000000000001547 83.0
BYD1_k127_5889551_15 TIGRFAM TonB K03832 - - 0.0000000000000805 81.0
BYD1_k127_5889551_16 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000004361 60.0
BYD1_k127_5889551_2 ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 472.0
BYD1_k127_5889551_3 BtpA family K06971 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001426 285.0
BYD1_k127_5889551_4 MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001967 275.0
BYD1_k127_5889551_5 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000004505 216.0
BYD1_k127_5889551_6 - - - - 0.000000000000000000000000000000000000000000003049 171.0
BYD1_k127_5889551_7 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000005888 160.0
BYD1_k127_5889551_8 PFAM Leukotriene A4 hydrolase, C-terminal - - - 0.00000000000000000000000000000000000000002587 158.0
BYD1_k127_5889551_9 Peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000165 123.0
BYD1_k127_5895923_0 N-acetyldiaminopimelate deacetylase activity K12941 - - 8.213e-239 747.0
BYD1_k127_5895923_1 Carboxypeptidase regulatory-like domain - - - 3.316e-197 651.0
BYD1_k127_5895923_2 Carboxypeptidase regulatory-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 606.0
BYD1_k127_5895923_3 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 448.0
BYD1_k127_5895923_4 Domain of unknown function (DUF4932) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001799 281.0
BYD1_k127_5895923_5 PFAM phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003033 259.0
BYD1_k127_5895923_6 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000002697 169.0
BYD1_k127_5895923_7 zinc ion binding K02347,K04486 - 3.1.3.15 0.0000000003866 68.0
BYD1_k127_590442_0 Glycosyltransferase 36 associated - - - 0.0 1743.0
BYD1_k127_5981725_0 Peptidase family M49 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004915 579.0
BYD1_k127_5981725_1 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 417.0
BYD1_k127_5981725_2 thiolester hydrolase activity K01179,K06889,K10773,K15853 - 3.2.1.4,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 293.0
BYD1_k127_5999499_0 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.0 1363.0
BYD1_k127_5999499_1 peroxiredoxin activity - - - 4.349e-293 908.0
BYD1_k127_5999499_2 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000002444 222.0
BYD1_k127_5999499_3 ASPIC and UnbV - - - 0.00000000000000000000000000000000009485 140.0
BYD1_k127_5999499_4 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.0000000000000000000000000000002449 125.0
BYD1_k127_6015167_0 beta-propeller repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007462 485.0
BYD1_k127_6015167_1 protein kinase related protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009278 413.0
BYD1_k127_6015167_2 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 340.0
BYD1_k127_6015167_3 beta-propeller repeat - - - 0.000000000000000000000000000000000000000000000000000000000003231 219.0
BYD1_k127_6015167_4 Ankyrin repeats (3 copies) - - - 0.0000000000000006955 87.0
BYD1_k127_602211_0 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004275 229.0
BYD1_k127_602211_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000001094 154.0
BYD1_k127_6048832_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 2.626e-220 696.0
BYD1_k127_6048832_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008127 488.0
BYD1_k127_6048832_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 430.0
BYD1_k127_6048832_3 PDZ domain (Also known as DHR K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000616 202.0
BYD1_k127_6048832_4 Zinc-binding dehydrogenase K02030,K03810 - - 0.00000000000000000000000000000000000000000000000000364 187.0
BYD1_k127_6048832_5 Response regulator receiver domain K02657,K03413 - - 0.00000000000000003665 87.0
BYD1_k127_6116225_0 Prolyl oligopeptidase family - - - 1.452e-259 820.0
BYD1_k127_6116225_1 efflux transmembrane transporter activity K02004 - - 3.241e-201 650.0
BYD1_k127_6116225_2 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 603.0
BYD1_k127_6116225_3 PAS fold K02484 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 459.0
BYD1_k127_6116225_4 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 342.0
BYD1_k127_6116225_5 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001925 294.0
BYD1_k127_6116225_6 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002646 271.0
BYD1_k127_6116225_7 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000001835 111.0
BYD1_k127_6116225_8 ankyrin repeats - - - 0.0000000000000006018 87.0
BYD1_k127_6116806_0 PFAM Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 622.0
BYD1_k127_6116806_1 - - - - 0.000000000000000000000000000000000000000002587 165.0
BYD1_k127_6116806_2 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000001887 149.0
BYD1_k127_6116806_3 von Willebrand factor, type A - - - 0.000000000000000000000000000001197 136.0
BYD1_k127_6127116_0 MviN-like protein K03980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009336 615.0
BYD1_k127_6127116_1 Aminotransferase class-III K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 502.0
BYD1_k127_6127116_10 PIN domain - - - 0.00000000000000000000001958 106.0
BYD1_k127_6127116_11 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000001066 105.0
BYD1_k127_6127116_12 Pilus assembly protein PilX K02673 - - 0.000000000003191 79.0
BYD1_k127_6127116_13 RHS protein - - - 0.000000000004869 80.0
BYD1_k127_6127116_14 domain, Protein - - - 0.00000000002554 78.0
BYD1_k127_6127116_15 gag-polyprotein putative aspartyl protease - - - 0.000003296 60.0
BYD1_k127_6127116_16 pilus assembly protein PilW K02672 - - 0.00002518 55.0
BYD1_k127_6127116_17 PEP-CTERM motif - - - 0.0002909 51.0
BYD1_k127_6127116_18 Pfam:N_methyl_2 K02671 - - 0.0008582 48.0
BYD1_k127_6127116_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 336.0
BYD1_k127_6127116_3 Amidohydrolase family K12960,K20810 - 3.5.4.28,3.5.4.31,3.5.4.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007742 314.0
BYD1_k127_6127116_4 Disulphide isomerase - - - 0.0000000000000000000000000000000000000000000004611 168.0
BYD1_k127_6127116_5 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000009589 184.0
BYD1_k127_6127116_6 metallopeptidase activity K01179,K01183,K01729,K11031 - 3.2.1.14,3.2.1.4,4.2.2.3 0.000000000000000000000000000000000001727 160.0
BYD1_k127_6127116_7 Responsible for removing an oxidatively damaged form of guanine (7,8-dihydro-8-oxoguanine 7-oxoG) from DNA. Also nicks DNA at apurinic apyrimidinic sites (AP sites) K03653 - 4.2.99.18 0.00000000000000000000000000000000004713 142.0
BYD1_k127_6127116_8 COG3209 Rhs family protein - - - 0.00000000000000000000000000000000008578 154.0
BYD1_k127_6127116_9 Transglycosylase SLT domain K08309 - - 0.00000000000000000000000002755 115.0
BYD1_k127_616335_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 610.0
BYD1_k127_616335_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004032 574.0
BYD1_k127_616335_10 domain protein K14194 - - 0.00000000000000003474 96.0
BYD1_k127_616335_11 domain protein K14194 - - 0.0000000000000003966 92.0
BYD1_k127_616335_12 ADP-heptose-lipopolysaccharide heptosyltransferase activity - - - 0.00000006098 57.0
BYD1_k127_616335_2 Transporter-associated region K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009248 435.0
BYD1_k127_616335_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004631 426.0
BYD1_k127_616335_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008657 293.0
BYD1_k127_616335_5 Actin K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001073 264.0
BYD1_k127_616335_6 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000006154 214.0
BYD1_k127_616335_7 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000008622 207.0
BYD1_k127_616335_8 CarD-like/TRCF domain K07736 - - 0.00000000000000000000000000000000000002339 150.0
BYD1_k127_616335_9 PFAM YbbR family protein - - - 0.00000000000000000000001414 112.0
BYD1_k127_6183190_0 TIGRFAM geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000001187 187.0
BYD1_k127_6183190_1 pfam ammecr1 K06990,K09141 - - 0.0000000000000000000002271 101.0
BYD1_k127_6183190_2 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000151 92.0
BYD1_k127_6195018_0 Carboxymethylenebutenolidase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 467.0
BYD1_k127_6195018_1 PD-(D/E)XK nuclease superfamily K16898 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 430.0
BYD1_k127_6195018_2 amino acid - - - 0.000000000000000000000000000002102 134.0
BYD1_k127_6195018_3 exonuclease activity K16899 - 3.6.4.12 0.000000000000001892 86.0
BYD1_k127_6211636_0 Flavin containing amine oxidoreductase - - - 8.904e-292 902.0
BYD1_k127_6211636_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 4.822e-267 837.0
BYD1_k127_6211636_10 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 422.0
BYD1_k127_6211636_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 424.0
BYD1_k127_6211636_12 Belongs to the FGGY kinase family K00851 - 2.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009197 397.0
BYD1_k127_6211636_13 amino acid K03294,K20265 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 374.0
BYD1_k127_6211636_14 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 361.0
BYD1_k127_6211636_15 PhoQ Sensor K07640 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008436 346.0
BYD1_k127_6211636_16 Transcriptional regulatory protein, C terminal K07662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 312.0
BYD1_k127_6211636_17 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 295.0
BYD1_k127_6211636_19 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000005618 231.0
BYD1_k127_6211636_2 Carboxypeptidase regulatory-like domain - - - 5.874e-243 785.0
BYD1_k127_6211636_21 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000001252 190.0
BYD1_k127_6211636_22 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.000000000000000000000000000000001692 138.0
BYD1_k127_6211636_23 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000753 103.0
BYD1_k127_6211636_26 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000005126 59.0
BYD1_k127_6211636_3 with chaperone activity ATP-binding K03694,K03696 - - 4.748e-212 697.0
BYD1_k127_6211636_4 with chaperone activity ATP-binding K03694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 641.0
BYD1_k127_6211636_5 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 559.0
BYD1_k127_6211636_6 Glycoside Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 556.0
BYD1_k127_6211636_7 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 484.0
BYD1_k127_6211636_8 PFAM Beta-eliminating lyase K01620 - 4.1.2.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 466.0
BYD1_k127_6211636_9 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 446.0
BYD1_k127_6227148_0 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 454.0
BYD1_k127_6227148_1 Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source K18928 - - 0.000000000000000000000000000000000000000000000001125 177.0
BYD1_k127_6294210_0 Tricorn protease C1 domain K08676 - - 1.041e-202 643.0
BYD1_k127_6294210_1 peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 307.0
BYD1_k127_6294210_2 acetyltransferase - - - 0.000000000000000000000000000000000000000232 158.0
BYD1_k127_6392737_0 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000009281 204.0
BYD1_k127_6392737_2 Peptidase C14 caspase catalytic subunit p20 - - - 0.000009229 49.0
BYD1_k127_6393654_0 Peptidase M14, carboxypeptidase A - - - 0.0 1359.0
BYD1_k127_6393654_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 0.0 1044.0
BYD1_k127_6393654_10 Major Facilitator Superfamily - - - 0.0000000000000000000001496 98.0
BYD1_k127_6393654_11 Acetyltransferase (GNAT) domain - - - 0.00000000000000000003619 95.0
BYD1_k127_6393654_12 - - - - 0.0000000000000001417 84.0
BYD1_k127_6393654_13 Cna B domain protein - - - 0.00008087 56.0
BYD1_k127_6393654_2 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005798 582.0
BYD1_k127_6393654_3 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 326.0
BYD1_k127_6393654_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 308.0
BYD1_k127_6393654_5 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 312.0
BYD1_k127_6393654_6 von Willebrand factor type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000001348 226.0
BYD1_k127_6393654_7 GAF domain K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000000000000699 206.0
BYD1_k127_6393654_8 Ornithine cyclodeaminase/mu-crystallin family - - - 0.0000000000000000000000000000000000000000000000202 178.0
BYD1_k127_6393654_9 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000001723 138.0
BYD1_k127_6403716_0 Heparinase II/III N-terminus - - - 0.00000000000000000000000000000000000000000000000003003 191.0
BYD1_k127_6403716_1 Nucleotidyl transferase - - - 0.000000000000000000000000000000000000000000003716 174.0
BYD1_k127_6403716_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000002482 155.0
BYD1_k127_6403716_3 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase - - - 0.0000000000000003053 91.0
BYD1_k127_6413954_0 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.000000000000000000000000000000000000000000000000000000000000009279 229.0
BYD1_k127_6413954_1 Penicillin-binding protein 2 K05515 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016043,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042493,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0045229,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071944,GO:0071972,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 3.4.16.4 0.000000000000000000000000000000000000000000003328 176.0
BYD1_k127_6413954_2 - - - - 0.000000005918 61.0
BYD1_k127_6440640_0 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005031 575.0
BYD1_k127_6440640_1 fatty-acyl-CoA reductase (alcohol-forming) activity K01007,K18845 - 2.1.1.179,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 507.0
BYD1_k127_6440640_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 374.0
BYD1_k127_6440640_3 Acyl-transferase K00655 - 2.3.1.51 0.00000000000000000002284 102.0
BYD1_k127_6440640_4 Beta-lactamase class C and other penicillin binding - - - 0.00000000000005947 74.0
BYD1_k127_6450285_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 443.0
BYD1_k127_6450285_1 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009427 247.0
BYD1_k127_6450285_2 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000286 184.0
BYD1_k127_6450285_3 chaperone-mediated protein folding - - - 0.0000000000000000000000000000000000000000004647 179.0
BYD1_k127_6450285_4 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000000006076 127.0
BYD1_k127_6450839_0 metallocarboxypeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 527.0
BYD1_k127_6450839_2 4Fe-4S binding domain K00395,K02572,K03616 - 1.8.99.2 0.0000000000000000000000000000000001047 136.0
BYD1_k127_6481345_0 cellulose binding - - - 0.0 1380.0
BYD1_k127_6481345_1 Peptidase family M3 K01284 - 3.4.15.5 0.0 1080.0
BYD1_k127_6481345_2 hydrolase family 92 - - - 4.794e-317 997.0
BYD1_k127_6481345_3 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 295.0
BYD1_k127_6481345_4 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000000000000000000000008662 190.0
BYD1_k127_6481345_5 aminopeptidase activity - - - 0.000000000000000000000000000000000000000000001674 168.0
BYD1_k127_6481345_6 SnoaL-like domain K06893 - - 0.0000000000000000000000000000003138 128.0
BYD1_k127_6481345_7 homoserine kinase activity K00823,K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000002326 103.0
BYD1_k127_6494285_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 574.0
BYD1_k127_6494285_1 cAMP biosynthetic process K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 408.0
BYD1_k127_6494285_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002024 318.0
BYD1_k127_6524012_0 serine threonine protein kinase K12132 - 2.7.11.1 1.527e-204 670.0
BYD1_k127_6524012_1 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 500.0
BYD1_k127_6524012_2 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 320.0
BYD1_k127_6524012_3 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000003465 215.0
BYD1_k127_6524012_4 Integral membrane protein K02221 - - 0.0000000147 63.0
BYD1_k127_6546295_0 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 536.0
BYD1_k127_6546295_1 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 414.0
BYD1_k127_6546295_2 PFAM ATP-binding region, ATPase domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000007682 183.0
BYD1_k127_6546295_3 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000002621 137.0
BYD1_k127_6557499_0 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000402 232.0
BYD1_k127_6557499_1 Protein of unknown function (DUF1003) - - - 0.00000000000000000000000000000000000006013 149.0
BYD1_k127_6557499_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000001353 113.0
BYD1_k127_6599511_0 Amino acid permease K03294 - - 2.88e-208 659.0
BYD1_k127_6599511_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 538.0
BYD1_k127_6599511_2 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 441.0
BYD1_k127_6599511_3 Heparinase II/III N-terminus - - - 0.00000000000000000000003226 105.0
BYD1_k127_6599511_4 3'-5' exonuclease - - - 0.000000000000003727 79.0
BYD1_k127_6604512_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 520.0
BYD1_k127_6604512_1 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 509.0
BYD1_k127_6604512_2 Bacillithiol biosynthesis BshC K22136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 327.0
BYD1_k127_6604512_3 Belongs to the DapA family K01714,K22397 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019752,GO:0032787,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0047440,GO:0071704,GO:0072329,GO:1901575 4.1.2.28,4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000005496 266.0
BYD1_k127_6604512_4 isomerase activity K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000008431 233.0
BYD1_k127_6604512_5 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000005644 155.0
BYD1_k127_6604512_6 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000405 131.0
BYD1_k127_6604512_7 Biotin-requiring enzyme - - - 0.00000000000000000000001749 106.0
BYD1_k127_6604512_8 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.000000000000000000207 91.0
BYD1_k127_6604512_9 - - - - 0.0000005374 55.0
BYD1_k127_6607099_0 Transferrin receptor-like dimerisation domain K01301 - 3.4.17.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 621.0
BYD1_k127_6607099_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 578.0
BYD1_k127_6607099_2 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 426.0
BYD1_k127_6607099_3 tRNA processing K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000545 284.0
BYD1_k127_6607099_4 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000006362 235.0
BYD1_k127_6607099_5 Protein of unknown function (DUF1003) - - - 0.0000000000000000000000000000000000000000000000000000000000002977 221.0
BYD1_k127_6607099_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000004916 229.0
BYD1_k127_6607099_7 TIGRFAM haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED K01091,K01838 - 3.1.3.18,5.4.2.6 0.000000000000000000000000000000001259 140.0
BYD1_k127_6607099_8 histone H2A K63-linked ubiquitination - - - 0.00000000001098 72.0
BYD1_k127_6607099_9 PFAM Tetratricopeptide repeat - - - 0.000000001087 71.0
BYD1_k127_6616182_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 508.0
BYD1_k127_6616182_1 FtsX-like permease family - - - 0.00000000000000000000000000000000000000000000000000000004015 207.0
BYD1_k127_6630177_0 Peptidase inhibitor I9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 544.0
BYD1_k127_6630177_1 COG0635 Coproporphyrinogen III oxidase and related Fe-S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005272 506.0
BYD1_k127_6630177_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 479.0
BYD1_k127_6630177_3 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 445.0
BYD1_k127_6630177_4 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001902 356.0
BYD1_k127_6630177_5 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000189 284.0
BYD1_k127_6630177_6 COG0644 Dehydrogenases (flavoproteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005082 270.0
BYD1_k127_6630177_7 PQQ-like domain - - - 0.000000000000006771 77.0
BYD1_k127_6632974_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1150.0
BYD1_k127_6632974_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K00256 - 1.3.99.16 4.932e-243 769.0
BYD1_k127_6632974_2 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 6.956e-194 621.0
BYD1_k127_6632974_3 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000000000003864 197.0
BYD1_k127_6632974_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000003902 136.0
BYD1_k127_6632974_5 Transposase (IS116 IS110 IS902 family) K07486 - - 0.00002812 46.0
BYD1_k127_6653999_0 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006102 276.0
BYD1_k127_6653999_1 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000001543 209.0
BYD1_k127_6653999_2 thiol-disulfide - - - 0.0000000000000000000000000000000000000000004619 164.0
BYD1_k127_6653999_3 Belongs to the Fur family K09825 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000438 123.0
BYD1_k127_6653999_4 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000266 121.0
BYD1_k127_6653999_5 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000000000205 103.0
BYD1_k127_6653999_6 Male sterility protein - - - 0.000000000000000006496 89.0
BYD1_k127_6841508_0 Tricorn protease homolog K08676 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 624.0
BYD1_k127_6853182_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.0 1064.0
BYD1_k127_6853182_1 (ABC) transporter K06147,K18890 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 604.0
BYD1_k127_6853182_2 ABC transporter, transmembrane K18889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 394.0
BYD1_k127_6853182_3 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 309.0
BYD1_k127_6853182_4 lytic transglycosylase activity K03194 - - 0.00000001202 67.0
BYD1_k127_6858826_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0000175,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004518,GO:0004527,GO:0004532,GO:0004540,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008408,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016796,GO:0016896,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 6.969e-220 703.0
BYD1_k127_6858826_1 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000002288 207.0
BYD1_k127_6858826_2 Peptidase family M23 K21472 - - 0.0000000000000000000000000000000000001548 151.0
BYD1_k127_6858826_3 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000000000000000000000000004608 130.0
BYD1_k127_6859033_0 Belongs to the aldehyde dehydrogenase family K22187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 447.0
BYD1_k127_6859033_1 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 419.0
BYD1_k127_6859033_2 PFAM Iron permease FTR1 - - - 0.000000000000000003919 94.0
BYD1_k127_6876932_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 8.675e-223 705.0
BYD1_k127_6876932_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 8.709e-217 681.0
BYD1_k127_6876932_2 Enoyl-CoA hydratase/isomerase K15513 - 4.1.2.44 2.484e-216 683.0
BYD1_k127_6876932_3 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 381.0
BYD1_k127_6876932_4 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 308.0
BYD1_k127_6876932_5 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000000002442 240.0
BYD1_k127_6876932_6 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000000000000000006464 144.0
BYD1_k127_6876932_7 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) - - - 0.00000000000000000000002322 106.0
BYD1_k127_6926416_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 329.0
BYD1_k127_6926416_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007151 275.0
BYD1_k127_6926416_2 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000002286 183.0
BYD1_k127_6926416_3 Belongs to the SUA5 family K07566 - 2.7.7.87 0.00000000000000000000000000000000000007929 149.0
BYD1_k127_6926416_4 Tetratricopeptide repeat protein - - - 0.000638 51.0
BYD1_k127_7072932_0 protease with the C-terminal PDZ domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 332.0
BYD1_k127_7072932_1 Related to alanyl-tRNA synthetase HxxxH domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006431 279.0
BYD1_k127_7072932_2 lipid kinase, YegS Rv2252 BmrU family - - - 0.00000000000000000000000000000000000000000000001679 181.0
BYD1_k127_7072932_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 0.00000000000000000000000000000000000000000012 160.0
BYD1_k127_7072932_4 response to abiotic stimulus - - - 0.000135 51.0
BYD1_k127_7103732_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 532.0
BYD1_k127_7103732_1 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009146 404.0
BYD1_k127_7103732_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000131 166.0
BYD1_k127_7103732_3 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000005124 162.0
BYD1_k127_7103732_4 - - - - 0.0006191 46.0
BYD1_k127_7135501_0 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.000000000000000000000000000000000000001005 171.0
BYD1_k127_7142728_0 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 580.0
BYD1_k127_7142728_1 Peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 482.0
BYD1_k127_7142728_10 Riboflavin synthase K00793 GO:0003674,GO:0003824,GO:0004746,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000001091 212.0
BYD1_k127_7142728_11 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.00000000000000000000000000000000000000000000000000000328 197.0
BYD1_k127_7142728_12 PFAM Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000001009 184.0
BYD1_k127_7142728_13 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000001048 171.0
BYD1_k127_7142728_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000000000000000000003948 159.0
BYD1_k127_7142728_15 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000156 156.0
BYD1_k127_7142728_16 diguanylate cyclase - - - 0.000000000000000000000000000000009626 148.0
BYD1_k127_7142728_17 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000002396 112.0
BYD1_k127_7142728_18 Cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000006537 86.0
BYD1_k127_7142728_19 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.00000000003347 72.0
BYD1_k127_7142728_2 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 490.0
BYD1_k127_7142728_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.00000000004782 69.0
BYD1_k127_7142728_3 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004224 455.0
BYD1_k127_7142728_4 Peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 376.0
BYD1_k127_7142728_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 328.0
BYD1_k127_7142728_6 PFAM peptidase M19 renal dipeptidase K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 317.0
BYD1_k127_7142728_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002958 289.0
BYD1_k127_7142728_8 surface antigen variable number - - - 0.00000000000000000000000000000000000000000000000000000000000001838 246.0
BYD1_k127_7142728_9 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000003862 246.0
BYD1_k127_7150722_0 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 535.0
BYD1_k127_7150722_1 glycosyl transferase group 1 K00754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 400.0
BYD1_k127_7150722_2 Scaffold protein Nfu/NifU N terminal - - - 0.00000000000000000000000000000000000000000000000000003523 193.0
BYD1_k127_7150722_3 GlcNAc-PI de-N-acetylase K01463 - - 0.00000000000000000000000000000000000000000000000007365 186.0
BYD1_k127_7150722_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000003027 170.0
BYD1_k127_7150722_5 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000001189 72.0
BYD1_k127_7205605_0 peptidase S9A, prolyl oligopeptidase domain protein beta-propeller K01354 - 3.4.21.83 4.569e-260 819.0
BYD1_k127_7205605_1 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 3.381e-257 795.0
BYD1_k127_7205605_10 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000006441 245.0
BYD1_k127_7205605_11 beta-ketoacyl-acyl-carrier-protein synthase III activity K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000001141 229.0
BYD1_k127_7205605_12 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000366 185.0
BYD1_k127_7205605_13 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000002067 184.0
BYD1_k127_7205605_14 phosphoprotein phosphatase activity K07313 - 3.1.3.16 0.0000000000000000000000000000000000000000001266 170.0
BYD1_k127_7205605_15 PFAM von Willebrand factor type A - - - 0.000000000000000000000000000000000000001542 161.0
BYD1_k127_7205605_16 PAS PAC domain-like protein - - - 0.0000000000000000000000000001385 135.0
BYD1_k127_7205605_17 ThiS family K21029,K21147 - 2.7.7.80,2.8.1.11 0.000000000000000000000000005113 113.0
BYD1_k127_7205605_18 - - - - 0.00000000000000000000000003445 120.0
BYD1_k127_7205605_19 Glycine/sarcosine/betaine reductase selenoprotein B (GRDB) K10794 - 1.21.4.1 0.000000000000000000000003038 112.0
BYD1_k127_7205605_2 Tetratricopeptide repeats K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 575.0
BYD1_k127_7205605_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000003097 91.0
BYD1_k127_7205605_21 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000005078 94.0
BYD1_k127_7205605_23 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.000000000001128 70.0
BYD1_k127_7205605_25 Domain of unknown function (DUF309) - - - 0.000000009908 63.0
BYD1_k127_7205605_3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 547.0
BYD1_k127_7205605_4 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 513.0
BYD1_k127_7205605_5 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 483.0
BYD1_k127_7205605_6 PFAM Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 439.0
BYD1_k127_7205605_7 Gluconolactonase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 343.0
BYD1_k127_7205605_8 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 344.0
BYD1_k127_7205605_9 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001103 282.0
BYD1_k127_7227861_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 582.0
BYD1_k127_7227861_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 484.0
BYD1_k127_7227861_2 beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000551 463.0
BYD1_k127_7227861_3 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009746 415.0
BYD1_k127_7227861_4 adenylate kinase activity K00939 - 2.7.4.3 0.000000000000000000000000000000000000000000000000000000007073 206.0
BYD1_k127_7227861_5 - - - - 0.000000000000000000000000000004013 131.0
BYD1_k127_7227861_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000002258 115.0
BYD1_k127_7227861_7 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000004142 93.0
BYD1_k127_7227861_9 Protein of unknown function (DUF3667) - - - 0.0000000000001052 81.0
BYD1_k127_7303267_0 UPF0210 protein K09157 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 556.0
BYD1_k127_7303267_1 Aldehyde - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006301 456.0
BYD1_k127_7303267_2 von Willebrand factor, type A - - - 0.00000000000000000000000000000000000000000000001656 186.0
BYD1_k127_7303267_3 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000000006773 173.0
BYD1_k127_7303267_4 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000000000000000000000000000000008754 170.0
BYD1_k127_7303267_5 ethanolamine catabolic process K04027 - - 0.000000000000000000000000000000000000103 146.0
BYD1_k127_7303267_6 Carbon dioxide concentrating mechanism carboxysome shell protein - - - 0.000000000000000000000000000004903 123.0
BYD1_k127_7303267_7 ethanolamine utilization protein EutN carboxysome structural protein Ccml K04028 - - 0.00000000000000000000000001576 112.0
BYD1_k127_7303267_8 Belongs to the UPF0237 family K07166 - - 0.000000000000000003409 90.0
BYD1_k127_7303267_9 Helix-turn-helix domain K15539 - - 0.000000000002316 75.0
BYD1_k127_7354177_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.736e-237 752.0
BYD1_k127_7354177_1 Leucine-rich repeat K13730 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 327.0
BYD1_k127_7354177_2 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000001223 206.0
BYD1_k127_7354177_3 - - - - 0.00000000000000000000003532 109.0
BYD1_k127_7354177_4 Domain of unknown function (DUF4384) - - - 0.00000000000000009426 92.0
BYD1_k127_7354177_5 TIGRFAM Translation elongation factor K02355 - - 0.0000005826 51.0
BYD1_k127_7354177_6 Appr-1'-p processing enzyme - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0002458 47.0
BYD1_k127_7382410_0 extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007134 283.0
BYD1_k127_7382410_1 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000001457 233.0
BYD1_k127_7382410_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000007016 171.0
BYD1_k127_7382410_3 L-threonylcarbamoyladenylate synthase K07566 - 2.7.7.87 0.000000000000000000000000000000000000006456 155.0
BYD1_k127_7382410_4 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000002733 130.0
BYD1_k127_7382410_5 cellulose binding - - - 0.0002323 46.0
BYD1_k127_7382410_6 TIGRFAM cytochrome C family protein - - - 0.000837 51.0
BYD1_k127_7460626_0 HEAT repeats - - - 0.00000000000003426 85.0
BYD1_k127_7460626_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000001283 73.0
BYD1_k127_7460626_3 PBS lyase HEAT-like repeat - - - 0.0002183 53.0
BYD1_k127_7461730_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 444.0
BYD1_k127_7461730_1 Haem-degrading - - - 0.000000000000000000000000000000000000000000001714 181.0
BYD1_k127_746820_0 PFAM Type II secretion system protein E K02652 - - 2.223e-218 692.0
BYD1_k127_746820_1 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005341 386.0
BYD1_k127_746820_10 Carboxypeptidase regulatory-like domain - - - 0.000000005181 64.0
BYD1_k127_746820_11 Putative zinc-finger - - - 0.0004568 49.0
BYD1_k127_746820_2 PFAM Type II secretion system F domain K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007899 264.0
BYD1_k127_746820_3 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000004297 239.0
BYD1_k127_746820_4 Participates in transcription elongation, termination and antitermination - - - 0.000000000000000000000000000000000000000000000000000000002772 216.0
BYD1_k127_746820_5 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000004603 147.0
BYD1_k127_746820_6 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000001374 122.0
BYD1_k127_746820_7 Secretin and TonB N terminus short domain K02453 - - 0.00000000000000000000000000001403 138.0
BYD1_k127_746820_8 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000003458 108.0
BYD1_k127_746820_9 Pilus assembly protein K02662 - - 0.000000001299 69.0
BYD1_k127_747317_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007205 544.0
BYD1_k127_747317_1 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K02549 - 4.2.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 403.0
BYD1_k127_747317_2 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000002294 225.0
BYD1_k127_747317_3 Calcineurin-like phosphoesterase superfamily domain K07098 - - 0.000000000000000000000000009726 118.0
BYD1_k127_747317_4 transcriptional regulator, RpiR family - - - 0.0000000000000000004139 98.0
BYD1_k127_747317_5 - - - - 0.00000000000000005285 85.0
BYD1_k127_7479717_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 518.0
BYD1_k127_7479717_1 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000002001 261.0
BYD1_k127_7479717_2 DNA primase activity K02316 GO:0003674,GO:0003824,GO:0003896,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0040007,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0071944,GO:0090304,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 - 0.0000008265 59.0
BYD1_k127_7483468_0 iron-nicotianamine transmembrane transporter activity - GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0008150,GO:0016020,GO:0022857,GO:0051179,GO:0051234,GO:0055085 - 8.456e-320 989.0
BYD1_k127_7483468_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007192 334.0
BYD1_k127_7483468_2 - - - - 0.000000000000000000000773 105.0
BYD1_k127_7483468_3 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.000000002192 58.0
BYD1_k127_750316_0 Belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 3.217e-215 678.0
BYD1_k127_750316_1 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000001254 200.0
BYD1_k127_750592_0 PFAM Pyridoxal-dependent decarboxylase conserved domain K01580,K01593,K13745 - 4.1.1.105,4.1.1.15,4.1.1.28,4.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 582.0
BYD1_k127_750592_1 3'(2'),5'-bisphosphate nucleotidase activity K01082 - 3.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000001885 245.0
BYD1_k127_750592_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001461 237.0
BYD1_k127_7529673_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 469.0
BYD1_k127_7529673_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 361.0
BYD1_k127_7529673_2 PFAM Metallophosphoesterase K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007907 289.0
BYD1_k127_7529673_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000006998 205.0
BYD1_k127_7529673_4 TPR repeat - - - 0.0000000000000000000000000000000000000000003179 170.0
BYD1_k127_7529673_5 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000002608 158.0
BYD1_k127_7529673_6 Ribosomal protein L35 K02916 - - 0.00000000000000000006876 90.0
BYD1_k127_7529673_7 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000006938 56.0
BYD1_k127_7542028_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 2.745e-221 698.0
BYD1_k127_7542028_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 473.0
BYD1_k127_7542028_2 Belongs to the ClpA ClpB family K03694 - - 0.00000000000000000000000000000000000000000000000000000000004959 218.0
BYD1_k127_7542028_3 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000001001 114.0
BYD1_k127_7542028_4 adenyl-nucleotide exchange factor activity K03687 GO:0000166,GO:0000774,GO:0001405,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005744,GO:0005759,GO:0006457,GO:0006605,GO:0006626,GO:0006790,GO:0006810,GO:0006839,GO:0006886,GO:0006996,GO:0007005,GO:0008104,GO:0008150,GO:0008152,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016226,GO:0017038,GO:0017076,GO:0019866,GO:0022607,GO:0030150,GO:0030234,GO:0030554,GO:0031090,GO:0031163,GO:0031966,GO:0031967,GO:0031974,GO:0031975,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0036094,GO:0042026,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044571,GO:0044743,GO:0045184,GO:0046907,GO:0050790,GO:0051082,GO:0051179,GO:0051186,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0060589,GO:0060590,GO:0065002,GO:0065007,GO:0065009,GO:0070013,GO:0070585,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0072594,GO:0072655,GO:0097159,GO:0098772,GO:0098796,GO:0098798,GO:0098800,GO:1901265,GO:1901363,GO:1990542 - 0.00000000000000006068 89.0
BYD1_k127_7635227_0 Insulinase (Peptidase family M16) K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 578.0
BYD1_k127_7635227_1 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 574.0
BYD1_k127_7635227_10 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 331.0
BYD1_k127_7635227_11 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 308.0
BYD1_k127_7635227_12 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 305.0
BYD1_k127_7635227_13 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002725 286.0
BYD1_k127_7635227_14 Phosphoribulokinase / Uridine kinase family K00855,K00876 GO:0003674,GO:0003824,GO:0004849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006213,GO:0006220,GO:0006221,GO:0006222,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008655,GO:0009058,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009173,GO:0009174,GO:0009218,GO:0009220,GO:0009224,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0043094,GO:0043097,GO:0043174,GO:0043771,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046035,GO:0046049,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.1.19,2.7.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000123 250.0
BYD1_k127_7635227_15 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001365 238.0
BYD1_k127_7635227_16 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000001561 184.0
BYD1_k127_7635227_17 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000005121 173.0
BYD1_k127_7635227_18 - - - - 0.000000000000000000000000000000000000000000001365 169.0
BYD1_k127_7635227_19 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.0000000000000000000000000000000000000000000467 164.0
BYD1_k127_7635227_2 ABC transporter K02056 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008178 538.0
BYD1_k127_7635227_20 Protein of unknown function, DUF393 - - - 0.000000000000000000000000000000366 126.0
BYD1_k127_7635227_21 Prephenate dehydratase K03856,K04518,K14170 - 2.5.1.54,4.2.1.51,5.4.99.5 0.00000000000000000000000000001137 123.0
BYD1_k127_7635227_22 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000003583 114.0
BYD1_k127_7635227_23 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.00000000000000000000001001 101.0
BYD1_k127_7635227_24 PFAM Chorismate mutase, type II - - - 0.000000000000411 72.0
BYD1_k127_7635227_3 Amidohydrolase family K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 468.0
BYD1_k127_7635227_4 The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis K00756,K00758 - 2.4.2.2,2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006964 428.0
BYD1_k127_7635227_5 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008571 409.0
BYD1_k127_7635227_6 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 392.0
BYD1_k127_7635227_7 Glycosyl hydrolase family 9 K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000177 382.0
BYD1_k127_7635227_8 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 365.0
BYD1_k127_7635227_9 PFAM Basic membrane lipoprotein K07335 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 335.0
BYD1_k127_7671333_0 cell shape determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007451 331.0
BYD1_k127_7671333_1 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.00000000000000000000000000000000000000001764 162.0
BYD1_k127_7671333_2 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000008327 130.0
BYD1_k127_779925_0 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 587.0
BYD1_k127_779925_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008621 474.0
BYD1_k127_779925_10 HNH endonuclease - - - 0.00000000000000000000000003875 109.0
BYD1_k127_779925_11 Prokaryotic dksA/traR C4-type zinc finger K06204 - - 0.00000000000000000000001617 104.0
BYD1_k127_779925_12 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.000000000000000000003958 95.0
BYD1_k127_779925_2 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 408.0
BYD1_k127_779925_3 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000004951 167.0
BYD1_k127_779925_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000001985 155.0
BYD1_k127_779925_5 Ribosomal L27 protein K02899 - - 0.0000000000000000000000000000000003921 132.0
BYD1_k127_779925_6 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000001614 127.0
BYD1_k127_779925_7 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000005258 118.0
BYD1_k127_779925_8 PFAM Phosphoribosyltransferase K02242 - - 0.000000000000000000000000001345 120.0
BYD1_k127_779925_9 Ribosomal protein L17 K02879 - - 0.00000000000000000000000003409 115.0
BYD1_k127_7839637_0 MacB-like periplasmic core domain - - - 3.066e-251 799.0
BYD1_k127_7839637_1 efflux transmembrane transporter activity K02004 - - 2.925e-209 676.0
BYD1_k127_7839637_2 efflux transmembrane transporter activity K02004 - - 1.089e-205 666.0
BYD1_k127_7839637_3 efflux transmembrane transporter activity K02004 - - 5.839e-202 659.0
BYD1_k127_7839637_4 efflux transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 584.0
BYD1_k127_7839637_5 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008487 584.0
BYD1_k127_7839637_6 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 469.0
BYD1_k127_7839637_7 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000001008 219.0
BYD1_k127_7839637_8 efflux transmembrane transporter activity - - - 0.000000000000001997 78.0
BYD1_k127_7883626_0 Amidohydrolase family K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 471.0
BYD1_k127_7883626_1 ATPases associated with a variety of cellular activities K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 365.0
BYD1_k127_7883626_2 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004913 343.0
BYD1_k127_7883626_3 Uncharacterised nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000005999 210.0
BYD1_k127_7893666_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 604.0
BYD1_k127_7893666_1 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 306.0
BYD1_k127_7893666_2 Heparinase II/III-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001872 234.0
BYD1_k127_7893666_3 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000006186 106.0
BYD1_k127_7893666_4 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000001055 77.0
BYD1_k127_7896760_0 ABC-type sugar transport system periplasmic component K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005681 418.0
BYD1_k127_7896760_1 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007694 362.0
BYD1_k127_7896760_2 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006051 318.0
BYD1_k127_7896760_3 Chlorophyllase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 302.0
BYD1_k127_7896760_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems - - - 0.000000000000000000000000000000000000000000005443 169.0
BYD1_k127_7896760_6 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000002823 162.0
BYD1_k127_7896760_7 YCII-related domain - - - 0.00000000000000000000000008257 110.0
BYD1_k127_7907436_0 Phage shock protein A, PspA K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005708 264.0
BYD1_k127_7907436_1 ATPases associated with a variety of cellular activities K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004983 259.0
BYD1_k127_7907436_2 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000008556 248.0
BYD1_k127_7907436_3 ABC-type nitrate sulfonate bicarbonate transport system permease component K02050 - - 0.0000000000000000000000000000000000000000000000000000001991 203.0
BYD1_k127_7907436_4 - - - - 0.0000000003873 72.0
BYD1_k127_7948914_0 Polysulphide reductase, NrfD K00185 - - 9.077e-214 670.0
BYD1_k127_7948914_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 372.0
BYD1_k127_7948914_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 366.0
BYD1_k127_7948914_3 signal sequence binding K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006252 287.0
BYD1_k127_7948914_4 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000001505 229.0
BYD1_k127_7948914_5 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000000000000000000000002521 220.0
BYD1_k127_7948914_6 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000001181 197.0
BYD1_k127_7959725_0 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784,K08678,K08679 - 4.1.1.35,4.2.1.46,5.1.3.2,5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 512.0
BYD1_k127_7959725_1 asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 466.0
BYD1_k127_7959725_10 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000001402 228.0
BYD1_k127_7959725_11 lipolytic protein G-D-S-L family - - - 0.0000000000009715 79.0
BYD1_k127_7959725_12 Methyltransferase domain - - - 0.00000005855 57.0
BYD1_k127_7959725_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 430.0
BYD1_k127_7959725_3 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003051 377.0
BYD1_k127_7959725_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009758 348.0
BYD1_k127_7959725_5 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008414 340.0
BYD1_k127_7959725_6 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 304.0
BYD1_k127_7959725_7 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 300.0
BYD1_k127_7959725_8 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006451 241.0
BYD1_k127_7959725_9 Capsular exopolysaccharide family K16554 - - 0.000000000000000000000000000000000000000000000000000000000000000008825 236.0
BYD1_k127_7977609_0 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 354.0
BYD1_k127_7986416_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.064e-269 854.0
BYD1_k127_7986416_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000001556 134.0
BYD1_k127_7986416_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000003548 105.0
BYD1_k127_7986416_3 Protein of unknown function (DUF541) K09807 - - 0.0000002959 56.0
BYD1_k127_8029994_0 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001642 281.0
BYD1_k127_8029994_1 Lecithin:cholesterol acyltransferase - - - 0.00000000000000000000000000000000000000000000000343 190.0
BYD1_k127_8029994_2 PFAM UbiA prenyltransferase K03179 - 2.5.1.39 0.000001029 52.0
BYD1_k127_8071157_0 cobalamin-transporting ATPase activity - - - 0.0 1141.0
BYD1_k127_8071157_1 COGs COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 505.0
BYD1_k127_8071157_2 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 364.0
BYD1_k127_8071157_3 Domain of unknown function (DUF2088) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000683 286.0
BYD1_k127_8071157_4 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000001947 188.0
BYD1_k127_8071157_5 Protein of unknown function (DUF563) - - - 0.0000000000000000000000000000000000000000000002891 181.0
BYD1_k127_8071157_6 ROK family - - - 0.0000000000000000000000004953 108.0
BYD1_k127_8071157_7 Cupin domain - - - 0.00000000000000004891 85.0
BYD1_k127_8071157_8 Protein conserved in bacteria - - - 0.0000000000001381 84.0
BYD1_k127_8083475_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006029 334.0
BYD1_k127_8083475_1 PTS system fructose IIA component K02793,K02794,K02821 - 2.7.1.191,2.7.1.194 0.000000000000000000000000000000001666 134.0
BYD1_k127_8083475_2 Displays ATPase and GTPase activities K06958 - - 0.00000000000000000000000000006391 119.0
BYD1_k127_8095442_0 Natural resistance-associated macrophage protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008043 451.0
BYD1_k127_8095442_1 MgtE intracellular N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005317 415.0
BYD1_k127_8095442_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 358.0
BYD1_k127_8095442_3 COG1078 HD superfamily phosphohydrolases K06885 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005755 288.0
BYD1_k127_8095442_4 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001405 252.0
BYD1_k127_8095442_5 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000001767 221.0
BYD1_k127_8095442_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000003172 162.0
BYD1_k127_8095442_7 Tricorn protease C1 domain K03797 - 3.4.21.102 0.0000000000000000000000000000000000000002034 166.0
BYD1_k127_8095442_8 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0001109 53.0
BYD1_k127_8102014_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 453.0
BYD1_k127_8102014_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 411.0
BYD1_k127_8127259_0 Transglycosylase K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000397 496.0
BYD1_k127_8127259_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003666 430.0
BYD1_k127_8127259_10 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.000000000000000000000003498 106.0
BYD1_k127_8127259_11 lipopolysaccharide heptosyltransferase K02841,K02843 - - 0.00000000000457 68.0
BYD1_k127_8127259_12 multi-organism process - - - 0.0000000001046 73.0
BYD1_k127_8127259_14 - - - - 0.000001692 57.0
BYD1_k127_8127259_15 VWA domain containing CoxE-like protein - - - 0.000002387 60.0
BYD1_k127_8127259_2 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001142 258.0
BYD1_k127_8127259_3 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000208 244.0
BYD1_k127_8127259_4 D,d-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000001005 232.0
BYD1_k127_8127259_5 PFAM S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.0000000000000000000000000000000000000000000000000000000000001071 224.0
BYD1_k127_8127259_6 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000000009051 187.0
BYD1_k127_8127259_7 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000000000005688 183.0
BYD1_k127_8127259_8 Domain of unknown function (DUF4252) - - - 0.00000000000000000000000000000000000005544 149.0
BYD1_k127_8127259_9 Polysaccharide biosynthesis protein K12454 - 5.1.3.10 0.00000000000000000000000001015 120.0
BYD1_k127_8148274_0 RmlD substrate binding domain K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 432.0
BYD1_k127_8148274_1 Wzt C-terminal domain K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 399.0
BYD1_k127_8148274_2 Glycosyl transferase family 2 K20534 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007741 308.0
BYD1_k127_8148274_3 sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family - - - 0.0000000000000000000000000000000000000000000000000000000000002433 218.0
BYD1_k127_8148274_4 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000009276 85.0
BYD1_k127_8148274_5 Methyltransferase domain - - - 0.000000002347 69.0
BYD1_k127_8174923_0 Male sterility protein K01897 - 6.2.1.3 0.0 1303.0
BYD1_k127_8174923_1 epimerase dehydratase K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 306.0
BYD1_k127_8174923_2 Domain of unknown function (DUF2088) - - - 0.00000000000000000000000000000000000000000000000000000345 192.0
BYD1_k127_8174923_3 Peptidase family S41 - - - 0.0000002262 64.0
BYD1_k127_8253108_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 617.0
BYD1_k127_8309121_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 473.0
BYD1_k127_8309121_1 SpoIVB peptidase S55 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002795 373.0
BYD1_k127_8309121_10 PFAM Tetratricopeptide repeat - - - 0.000000000000255 79.0
BYD1_k127_8309121_11 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000002211 72.0
BYD1_k127_8309121_12 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.0003295 52.0
BYD1_k127_8309121_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000265 288.0
BYD1_k127_8309121_3 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005088 266.0
BYD1_k127_8309121_4 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000002595 229.0
BYD1_k127_8309121_5 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000007929 224.0
BYD1_k127_8309121_6 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000001269 235.0
BYD1_k127_8309121_7 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000002668 207.0
BYD1_k127_8309121_8 - - - - 0.00000000000000000000000000000000000000000000000002906 191.0
BYD1_k127_8309121_9 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752,K13818 - 2.7.7.77 0.0000000000000000000000000006774 121.0
BYD1_k127_8317291_0 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000002739 117.0
BYD1_k127_8317291_1 transferase activity, transferring glycosyl groups K07011 - - 0.0000003057 58.0
BYD1_k127_8321678_0 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0 1229.0
BYD1_k127_8321678_1 Tricorn protease C1 domain K08676 - - 1.084e-251 795.0
BYD1_k127_8321678_10 SNARE associated Golgi protein - - - 0.0000000108 56.0
BYD1_k127_8321678_11 Rhodanese-like domain K01069 - 3.1.2.6 0.00000003899 57.0
BYD1_k127_8321678_12 PFAM IstB domain protein ATP-binding protein - - - 0.0001803 47.0
BYD1_k127_8321678_2 PFAM TonB-dependent Receptor Plug - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 377.0
BYD1_k127_8321678_3 Pkd domain containing protein - - - 0.0000000000000000000000000000000000002597 156.0
BYD1_k127_8321678_4 - - - - 0.00000000000000000000000001745 114.0
BYD1_k127_8321678_5 Protein of unknown function (DUF3616) - - - 0.000000000000000000000002979 114.0
BYD1_k127_8321678_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000002997 105.0
BYD1_k127_8321678_7 von Willebrand factor, type A K07114 - - 0.0000000000000000000004297 109.0
BYD1_k127_8321678_8 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.000000000000000121 88.0
BYD1_k127_8321678_9 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.0000000000009922 68.0
BYD1_k127_8338896_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 385.0
BYD1_k127_8338896_1 phosphotransferase activity, carboxyl group as acceptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 315.0
BYD1_k127_8338896_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000615 193.0
BYD1_k127_8338896_3 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000004345 170.0
BYD1_k127_8338896_4 PQQ enzyme repeat - - - 0.0000000000000000000000000001461 129.0
BYD1_k127_8338896_5 Glycoprotease family K01409,K14742 GO:0002949,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000001242 121.0
BYD1_k127_8338896_6 O-Antigen ligase K18814 - - 0.000000000000000000000005241 115.0
BYD1_k127_8338896_7 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000176 108.0
BYD1_k127_8338896_8 Putative bacterial sensory transduction regulator - - - 0.0002404 53.0
BYD1_k127_8357040_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 2.562e-307 972.0
BYD1_k127_8357040_1 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 481.0
BYD1_k127_8357040_10 TIGRFAM VWFA-related Acidobacterial domain - - - 0.00000000008844 73.0
BYD1_k127_8357040_11 YtxH-like protein - - - 0.00001816 55.0
BYD1_k127_8357040_2 aminopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 437.0
BYD1_k127_8357040_3 Two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 330.0
BYD1_k127_8357040_4 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001048 260.0
BYD1_k127_8357040_5 PFAM aminotransferase, class I K10907 - - 0.000000000000000000000000000000000000000000000000000000000000000001098 230.0
BYD1_k127_8357040_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000005532 226.0
BYD1_k127_8357040_7 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000001271 139.0
BYD1_k127_8357040_8 RNA recognition motif - - - 0.000000000000000000000000000000000999 133.0
BYD1_k127_8357040_9 Regulatory protein, FmdB - - - 0.000000000000000009664 91.0
BYD1_k127_8364365_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007921 592.0
BYD1_k127_8364365_1 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 363.0
BYD1_k127_8364365_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003683 275.0
BYD1_k127_8364365_3 Carboxypeptidase regulatory-like domain - - - 0.0000000000000006011 92.0
BYD1_k127_8376797_0 TIGRFAM carbamoyl-phosphate synthase, large subunit K01955 - 6.3.5.5 0.0 1387.0
BYD1_k127_8376797_1 COG0226 ABC-type phosphate transport system periplasmic K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 434.0
BYD1_k127_8376797_10 IstB-like ATP binding protein K02315 - - 0.00000000000000000000000000000000000000000000000002563 187.0
BYD1_k127_8376797_11 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000002671 190.0
BYD1_k127_8376797_12 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000004303 188.0
BYD1_k127_8376797_13 CoA binding domain K06929 - - 0.00000000000000000000000000000000000000000000007442 171.0
BYD1_k127_8376797_14 Probable molybdopterin binding domain - - - 0.000000000000000000000000000000000000000000008496 170.0
BYD1_k127_8376797_15 phosphohistidine phosphatase, SixA K08296 - - 0.0000000000000000000000000000000006881 137.0
BYD1_k127_8376797_17 Thioredoxin-like - - - 0.00000000000000000000000006777 119.0
BYD1_k127_8376797_18 sequence-specific DNA binding K07726 - - 0.0000000000000000000003512 100.0
BYD1_k127_8376797_19 Cytotoxic translational repressor of toxin-antitoxin stability system - - - 0.0000000000001514 75.0
BYD1_k127_8376797_2 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009729 406.0
BYD1_k127_8376797_20 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07776 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009405,GO:0009889,GO:0010468,GO:0010556,GO:0010565,GO:0019216,GO:0019217,GO:0019219,GO:0019220,GO:0019222,GO:0031323,GO:0031326,GO:0044419,GO:0048583,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051252,GO:0051704,GO:0060255,GO:0062012,GO:0065007,GO:0080090,GO:0080134,GO:0097159,GO:1901363,GO:1902882,GO:1903506,GO:2000112,GO:2001141 - 0.000000006102 62.0
BYD1_k127_8376797_21 Diguanylate cyclase, GGDEF domain - - - 0.0001618 50.0
BYD1_k127_8376797_3 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 367.0
BYD1_k127_8376797_4 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 403.0
BYD1_k127_8376797_5 dna ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006446 356.0
BYD1_k127_8376797_6 dTDP biosynthetic process K00560,K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.1.1.45,2.7.4.9,4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 326.0
BYD1_k127_8376797_7 DNA ligase D, 3'-phosphoesterase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 316.0
BYD1_k127_8376797_8 dTDP biosynthetic process K00943,K01585 GO:0000166,GO:0000287,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0004798,GO:0005488,GO:0005515,GO:0005524,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009129,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009161,GO:0009165,GO:0009173,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009218,GO:0009219,GO:0009221,GO:0009259,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0018130,GO:0019001,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0019693,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046044,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046872,GO:0046940,GO:0046983,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.9,4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000002706 258.0
BYD1_k127_8376797_9 Streptomycin adenylyltransferase K05593 - - 0.000000000000000000000000000000000000000000000000000000005041 209.0
BYD1_k127_8406532_0 amino acid - - - 4.704e-260 816.0
BYD1_k127_8410806_0 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 469.0
BYD1_k127_8410806_1 protoporphyrinogen oxidase activity K00231,K14266 - 1.14.19.9,1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 469.0
BYD1_k127_8410806_2 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 437.0
BYD1_k127_8410806_3 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008512 345.0
BYD1_k127_8419552_0 Elongation factor G, domain IV K02355 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002847 570.0
BYD1_k127_8419552_1 - - - - 0.00000000000000000000000000000000000000000000000000001281 202.0
BYD1_k127_8419552_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000003163 183.0
BYD1_k127_8454460_0 efflux transmembrane transporter activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008007 622.0
BYD1_k127_8454460_1 efflux transmembrane transporter activity K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 538.0
BYD1_k127_8454460_2 efflux transmembrane transporter activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 390.0
BYD1_k127_8454460_3 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000001268 211.0
BYD1_k127_8564207_0 IgA Peptidase M64 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 603.0
BYD1_k127_8564207_1 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 520.0
BYD1_k127_8564207_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000914 203.0
BYD1_k127_8564207_3 Putative zinc-finger - - - 0.00000000000000000000000000000000000000000000000005076 188.0
BYD1_k127_8564207_4 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000003952 166.0
BYD1_k127_8564207_5 Cytochrome c - - - 0.000132 48.0
BYD1_k127_857697_0 ImcF-related N-terminal domain K11891 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 475.0
BYD1_k127_857697_1 ImpA, N-terminal, type VI secretion system K11902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001575 256.0
BYD1_k127_857697_2 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.0000000000000000000000000000000000000000002909 169.0
BYD1_k127_857697_3 Type VI secretion system protein DotU - - - 0.00000000000000000000000004277 121.0
BYD1_k127_8586581_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 1.354e-288 907.0
BYD1_k127_8586581_1 Psort location CytoplasmicMembrane, score 10.00 K06901 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 340.0
BYD1_k127_8586581_10 iron ion homeostasis - - - 0.000587 52.0
BYD1_k127_8586581_2 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 342.0
BYD1_k127_8586581_3 Amidohydrolase family K01466 - 3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 306.0
BYD1_k127_8586581_4 xanthine dehydrogenase activity K13479 - 1.17.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001275 285.0
BYD1_k127_8586581_5 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000000000000075 217.0
BYD1_k127_8586581_6 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000262 205.0
BYD1_k127_8586581_7 integral membrane protein - - - 0.0000000002154 70.0
BYD1_k127_8586581_8 iron ion homeostasis - - - 0.000006838 59.0
BYD1_k127_8600513_0 protein containing a von Willebrand factor type A (vWA) domain K11089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 468.0
BYD1_k127_8600513_2 ASPIC and UnbV - - - 0.00000000000000000001232 95.0
BYD1_k127_8690640_0 NeuB family K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 301.0
BYD1_k127_8690640_1 glutamine-fructose-6-phosphate transaminase (isomerizing) activity K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 291.0
BYD1_k127_8690640_2 Protein of unknown function (DUF4199) - - - 0.000000000000000000000000000000000000000000000000000002495 196.0
BYD1_k127_8690640_3 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000002218 183.0
BYD1_k127_8690640_4 PFAM DAHP synthetase I KDSA K03856 - 2.5.1.54 0.00000000000000000000000000000000000000000000006688 171.0
BYD1_k127_8690640_5 - - - - 0.000000000000000000000000000000000000000000003352 182.0
BYD1_k127_8690640_6 Transcriptional repressor, CopY family - - - 0.00000000000000000000000000000000000000007605 155.0
BYD1_k127_8690640_7 Prephenate dehydratase K04518 - 4.2.1.51 0.00000000000000000118 87.0
BYD1_k127_8842075_0 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000008093 231.0
BYD1_k127_8842075_1 - - - - 0.000000000000000000000000000000000000002903 156.0
BYD1_k127_8842075_2 MoaC family K03637 - 4.6.1.17 0.0000000000000000000000000000001871 128.0
BYD1_k127_8843421_0 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 328.0
BYD1_k127_8843421_1 CAAX protease self-immunity K07052 - - 0.0000000000000000000000000000005878 134.0
BYD1_k127_8859643_0 Urocanase Rossmann-like domain K01712 - 4.2.1.49 1.048e-272 848.0
BYD1_k127_8859643_1 Aromatic amino acid lyase K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007771 324.0
BYD1_k127_8859643_2 Inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008552 273.0
BYD1_k127_8859643_3 esterase K01070 - 3.1.2.12 0.00000000000000000000000000000000000001658 155.0
BYD1_k127_8859643_4 ATPases associated with a variety of cellular activities K10548 - 3.6.3.17 0.0000000000000000001908 89.0
BYD1_k127_8859643_5 Transcription factor zinc-finger K09981 - - 0.0000000001231 67.0
BYD1_k127_8907564_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 7.739e-237 745.0
BYD1_k127_8907564_1 imidazolonepropionase activity K00466 - 1.13.12.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 547.0
BYD1_k127_8907564_2 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 398.0
BYD1_k127_8907564_3 Glycosyl hydrolases family 16 K01216 - 3.2.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 384.0
BYD1_k127_8907564_4 DEAD DEAH box helicase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003436 260.0
BYD1_k127_8907564_5 Transglycosylase SLT domain K08309 - - 0.000000000000000000000000000000000000000000000000000000000001001 235.0
BYD1_k127_8907564_6 DEAD DEAH box helicase - - - 0.000000000000000000000000000000000000000000000000000000001552 222.0
BYD1_k127_8907564_7 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000001528 104.0
BYD1_k127_8907564_8 nuclear chromosome segregation - - - 0.00000000000000000000007624 113.0
BYD1_k127_8907772_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003739 276.0
BYD1_k127_8907772_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000004526 190.0
BYD1_k127_8918408_0 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004467 552.0
BYD1_k127_8918408_1 Peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 387.0
BYD1_k127_8919400_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 569.0
BYD1_k127_8919400_1 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 354.0
BYD1_k127_8919400_2 PQQ-like domain - - - 0.000000000000000000000000000000000000000000000003895 177.0
BYD1_k127_8955673_0 Catalyzes the conversion of 1-proline-5-carboxylate dehydrogenase to L-glutamate K00294 - 1.2.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 521.0
BYD1_k127_8955673_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 351.0
BYD1_k127_8955673_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000001443 201.0
BYD1_k127_9040310_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 6.704e-194 616.0
BYD1_k127_9040310_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00282 GO:0001505,GO:0003674,GO:0003824,GO:0004375,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005960,GO:0006082,GO:0006520,GO:0006544,GO:0006807,GO:0008150,GO:0008152,GO:0009069,GO:0009987,GO:0016491,GO:0016638,GO:0016642,GO:0017144,GO:0019752,GO:0032991,GO:0042133,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901605,GO:1902494,GO:1990204 1.4.4.2 0.000000000000000000000000000000000000000000000000003018 186.0
BYD1_k127_9040310_2 Ferredoxin - - - 0.00000000000000006875 82.0
BYD1_k127_9058328_0 Carboxypeptidase regulatory-like domain - - - 3.644e-274 871.0
BYD1_k127_9058328_1 copper resistance - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 327.0
BYD1_k127_9058328_2 exo-alpha-(2->6)-sialidase activity - - - 0.00000000000000000000000000000000000000000504 170.0
BYD1_k127_9058328_4 Copper binding periplasmic protein CusF - - - 0.000002458 54.0
BYD1_k127_9074515_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1183.0
BYD1_k127_9074515_1 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 314.0
BYD1_k127_9074515_2 decarboxylase K00486,K01593 - 1.14.13.9,4.1.1.105,4.1.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 300.0
BYD1_k127_9074515_3 Belongs to the PEP-utilizing enzyme family K01006,K01007 - 2.7.9.1,2.7.9.2 0.00000000000000000000000000000000000000000001993 168.0
BYD1_k127_9074515_4 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000001802 105.0
BYD1_k127_9092686_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000003525 240.0
BYD1_k127_9092686_1 TIGRFAM outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000000000000000000000000000000000006864 213.0
BYD1_k127_9092686_2 FabA-like domain K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000001742 178.0
BYD1_k127_9092686_3 Outer membrane protein (OmpH-like) K06142 - - 0.00000000001806 72.0
BYD1_k127_9092686_4 Outer membrane protein (OmpH-like) K06142 - - 0.000007818 56.0
BYD1_k127_9093970_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409,K03070 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 351.0
BYD1_k127_9093970_2 Conserved hypothetical protein 95 - - - 0.00000000000000000000000000000000000000001505 158.0
BYD1_k127_9104573_0 Belongs to the DegT DnrJ EryC1 family K02805 - 2.6.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 404.0
BYD1_k127_9104573_1 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005496 266.0
BYD1_k127_9104573_2 Putative zinc binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003403 253.0
BYD1_k127_9104573_3 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K00067,K01790 - 1.1.1.133,5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000003851 247.0
BYD1_k127_9110652_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 543.0
BYD1_k127_9110652_1 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 331.0
BYD1_k127_9113961_0 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 526.0
BYD1_k127_9113961_1 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 430.0
BYD1_k127_9113961_10 Two component, sigma54 specific, transcriptional regulator, Fis family K07712 - - 0.000000000000000000001389 99.0
BYD1_k127_9113961_11 transcriptional - - - 0.000000000000000000004523 98.0
BYD1_k127_9113961_12 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000006507 74.0
BYD1_k127_9113961_2 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 387.0
BYD1_k127_9113961_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601,K03797 - 3.1.11.6,3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009785 360.0
BYD1_k127_9113961_4 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005972 272.0
BYD1_k127_9113961_5 dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000803 275.0
BYD1_k127_9113961_6 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000002799 257.0
BYD1_k127_9113961_7 Belongs to the peptidase S41A family K06399 - 3.4.21.116 0.0000000000000000000000000000000000000000000000000000003033 209.0
BYD1_k127_9113961_8 transcriptional regulator - - - 0.000000000000000000000000000000000000000000001727 171.0
BYD1_k127_9113961_9 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000002465 123.0
BYD1_k127_9115281_0 COG1022 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 374.0
BYD1_k127_9115281_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000001414 79.0
BYD1_k127_9117834_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 524.0
BYD1_k127_9117834_1 Peptidase family M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 490.0
BYD1_k127_9117834_2 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 407.0
BYD1_k127_9117834_3 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 308.0
BYD1_k127_9117834_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002276 271.0
BYD1_k127_9117834_5 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000009331 127.0
BYD1_k127_9117834_6 Tetratricopeptide repeat - - - 0.0003471 53.0
BYD1_k127_9122313_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 332.0
BYD1_k127_9122313_1 Inositol monophosphatase family K01092,K05602 - 3.1.3.15,3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 297.0
BYD1_k127_9122313_2 Histidine biosynthesis bifunctional protein HisIE K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000006254 262.0
BYD1_k127_9133908_0 Acyl-CoA dehydrogenase, C-terminal domain K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005748 520.0
BYD1_k127_9133908_1 glycyl-tRNA aminoacylation K01880 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006426,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009345,GO:0009987,GO:0010467,GO:0016070,GO:0016594,GO:0016597,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0042165,GO:0042802,GO:0042803,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046983,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 494.0
BYD1_k127_9133908_10 Predicted membrane protein (DUF2085) - - - 0.0000000000000000000000000001519 122.0
BYD1_k127_9133908_11 AraC family transcriptional regulator - - - 0.00000000000001875 78.0
BYD1_k127_9133908_12 - - - - 0.00000000000003169 75.0
BYD1_k127_9133908_13 chlorophyll binding - - - 0.0001634 53.0
BYD1_k127_9133908_2 Bacterial fructose-1,6-bisphosphatase, glpX-encoded K02446 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 416.0
BYD1_k127_9133908_3 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 403.0
BYD1_k127_9133908_4 Belongs to the agmatine deiminase family K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 387.0
BYD1_k127_9133908_5 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 370.0
BYD1_k127_9133908_6 Glycosyl transferase family 21 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 314.0
BYD1_k127_9133908_7 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000000000000000000000000000000165 210.0
BYD1_k127_9133908_8 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000000000000000001424 216.0
BYD1_k127_9133908_9 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000005809 132.0
BYD1_k127_914672_0 Periplasmic binding proteins and sugar binding domain of LacI family K10439,K10552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004413 445.0
BYD1_k127_914672_1 Branched-chain amino acid transport system / permease component K10440,K10553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 435.0
BYD1_k127_914672_2 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 408.0
BYD1_k127_914672_3 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003416 269.0
BYD1_k127_914672_4 purine nucleotide biosynthetic process K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001415 259.0
BYD1_k127_914672_5 PFAM Uncharacterised ACR, YkgG family COG1556 K00782 - - 0.00000000000000000000003824 108.0
BYD1_k127_914672_6 ROK family - - - 0.00000000009947 63.0
BYD1_k127_9148456_0 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 419.0
BYD1_k127_9148456_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 335.0
BYD1_k127_9148456_2 transcriptional - - - 0.0000000000000000000003238 101.0
BYD1_k127_9148456_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000004529 62.0
BYD1_k127_9152760_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 330.0
BYD1_k127_9152760_1 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000000000009913 175.0
BYD1_k127_9152760_2 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000971 108.0
BYD1_k127_91591_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 570.0
BYD1_k127_91591_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 435.0
BYD1_k127_91591_2 pfkB family carbohydrate kinase K18478 - 2.7.1.184 0.000000000000000000000000000000000000000000000000000000000000000003557 237.0
BYD1_k127_9183307_0 Ftsk_gamma K03466 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000077 642.0
BYD1_k127_9183307_1 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000004811 241.0
BYD1_k127_9183307_2 Cysteine dioxygenase type I K00456 - 1.13.11.20 0.0000000000000000000002903 104.0
BYD1_k127_9198761_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 404.0
BYD1_k127_9198761_1 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003183 357.0
BYD1_k127_9198761_2 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 GO:0000166,GO:0000287,GO:0000820,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006521,GO:0006541,GO:0006542,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0008882,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0010565,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0019222,GO:0019752,GO:0030554,GO:0031323,GO:0032553,GO:0032555,GO:0032559,GO:0033238,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0070566,GO:0071704,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.42,2.7.7.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008926 329.0
BYD1_k127_9241530_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 434.0
BYD1_k127_9241530_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000004431 140.0
BYD1_k127_9241530_2 Subtilase family - - - 0.000000000000000000000000000007995 129.0
BYD1_k127_9249527_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1338.0
BYD1_k127_9249527_1 Phosphoglucose isomerase K01810,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 573.0
BYD1_k127_9249527_10 Plasmid stabilization - - - 0.000000000000000000000002171 106.0
BYD1_k127_9249527_11 - - - - 0.0000000000000000008478 87.0
BYD1_k127_9249527_12 Sigma-70 region 2 K03088 - - 0.00000000000000002118 87.0
BYD1_k127_9249527_13 Putative adhesin - - - 0.0000000348 65.0
BYD1_k127_9249527_2 Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 420.0
BYD1_k127_9249527_3 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004692 392.0
BYD1_k127_9249527_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006307 334.0
BYD1_k127_9249527_5 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 321.0
BYD1_k127_9249527_6 cell shape determining protein MreB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001184 256.0
BYD1_k127_9249527_7 Isochorismatase family K08281 - 3.5.1.19 0.000000000000000000000000000000000000000000000000000000004183 205.0
BYD1_k127_9249527_8 - - - - 0.0000000000000000000000000000000000000000000000000000004605 216.0
BYD1_k127_9249527_9 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000228 164.0
BYD1_k127_9296347_0 PFAM Alcohol dehydrogenase - - - 1.421e-203 639.0
BYD1_k127_9296347_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 297.0
BYD1_k127_9296347_2 PAP2 superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001514 287.0
BYD1_k127_9296347_3 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000003695 161.0
BYD1_k127_9296347_4 - - - - 0.0000000000000000000000000009162 115.0
BYD1_k127_9296347_5 CHAT domain - - - 0.0003641 43.0
BYD1_k127_9297387_0 cellulose binding - - - 0.0 1328.0
BYD1_k127_9297387_1 Domain of unknown function (DUF5117) - - - 1.291e-297 933.0
BYD1_k127_9297387_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 468.0
BYD1_k127_9297387_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 351.0
BYD1_k127_9297387_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000001441 268.0
BYD1_k127_9297387_5 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000008973 264.0
BYD1_k127_9297387_6 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000007944 138.0
BYD1_k127_9297387_7 Transcriptional regulator - - - 0.00000000000000000000000000000009136 132.0
BYD1_k127_9297387_8 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000002139 87.0
BYD1_k127_9297800_0 Dienelactone hydrolase family - - - 0.0 1137.0
BYD1_k127_9297800_1 cellulose binding - - - 4.682e-296 945.0
BYD1_k127_9297800_2 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009969 591.0
BYD1_k127_9297800_3 homolog of phage Mu protein gp47 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 443.0
BYD1_k127_9297800_4 homolog of phage Mu protein gp47 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008843 356.0
BYD1_k127_9297800_5 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000001283 196.0
BYD1_k127_9323789_0 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000004236 182.0
BYD1_k127_9323789_1 Belongs to the SEDS family K03588 GO:0002682,GO:0002684,GO:0008150,GO:0009605,GO:0009607,GO:0009987,GO:0035821,GO:0043207,GO:0044003,GO:0044403,GO:0044419,GO:0048518,GO:0048583,GO:0048584,GO:0050776,GO:0050778,GO:0050789,GO:0050896,GO:0051301,GO:0051701,GO:0051704,GO:0051707,GO:0051817,GO:0052031,GO:0052173,GO:0052200,GO:0052255,GO:0052552,GO:0052553,GO:0052555,GO:0052556,GO:0052564,GO:0052572,GO:0065007,GO:0075136 - 0.0000000000000000000000000000000000000009531 162.0
BYD1_k127_9323789_2 serine threonine protein kinase K08884,K12132 GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018107,GO:0018193,GO:0018210,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0036211,GO:0042304,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046777,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:1901564 2.7.11.1 0.000000000000000000000000000000007424 137.0
BYD1_k127_9342216_0 SNARE associated Golgi protein - - - 0.000000000000000002709 95.0
BYD1_k127_9342216_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000003815 92.0
BYD1_k127_9342216_2 - - - - 0.00000000491 64.0
BYD1_k127_9355701_0 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007683 314.0
BYD1_k127_9355701_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008475 279.0
BYD1_k127_9355701_2 metalloendopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000002311 204.0
BYD1_k127_9355701_3 Divalent ion tolerance protein K03926 - - 0.000000000000000000000004912 104.0
BYD1_k127_9359369_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 424.0
BYD1_k127_9359369_1 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 373.0
BYD1_k127_9359369_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004678 289.0
BYD1_k127_9359369_3 Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005436 267.0
BYD1_k127_9359369_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005923 258.0
BYD1_k127_9359369_5 FecR protein - - - 0.00000000000000000000000000000000000000000000000000000002336 220.0
BYD1_k127_9359369_6 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000001583 153.0
BYD1_k127_9394876_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008049 492.0
BYD1_k127_9394876_1 thymidine kinase activity K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000008583 230.0
BYD1_k127_9394876_2 Protein of unknown function DUF84 - GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0017144,GO:0034641,GO:0042723,GO:0044237,GO:0044281,GO:0046483,GO:0071704,GO:0072527,GO:1901360,GO:1901564 - 0.0000000000000000000000003665 113.0
BYD1_k127_9394876_3 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000003353 60.0
BYD1_k127_9507168_0 Mur ligase middle domain K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000007115 218.0
BYD1_k127_9507168_1 phosphate acetyltransferase K00625 - 2.3.1.8 0.0000000000000000000000000000000000000000000000001865 183.0
BYD1_k127_9507168_2 Protein of unknown function (DUF1232) - - - 0.000000000000000000000006507 114.0
BYD1_k127_9507168_3 Sensory domain in DIguanylate Cyclases and Two-component system - - - 0.00000000000000000002632 98.0
BYD1_k127_9551224_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 366.0
BYD1_k127_9551224_1 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 304.0
BYD1_k127_9551224_2 - - - - 0.0000000000000000000000007279 106.0
BYD1_k127_9551224_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000002347 100.0
BYD1_k127_9553860_0 PFAM magnesium chelatase K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 547.0
BYD1_k127_9553860_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000008734 127.0
BYD1_k127_9564327_0 Protein of unknown function, DUF255 K06888 - - 5.432e-245 774.0
BYD1_k127_9564327_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K11381 - 1.2.4.1,1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000623 405.0
BYD1_k127_9564327_2 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 415.0
BYD1_k127_9564327_3 Pyruvate dehydrogenase K00162 - 1.2.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 321.0
BYD1_k127_9564327_4 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 327.0
BYD1_k127_9571828_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 436.0
BYD1_k127_9571828_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 419.0
BYD1_k127_9571828_10 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00009042 53.0
BYD1_k127_9571828_2 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005622 365.0
BYD1_k127_9571828_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 315.0
BYD1_k127_9571828_4 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 309.0
BYD1_k127_9571828_5 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 306.0
BYD1_k127_9571828_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000001513 179.0
BYD1_k127_9571828_7 Roadblock/LC7 domain - - - 0.00000000000000000000000000000000000000000000187 169.0
BYD1_k127_9571828_8 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000001902 83.0
BYD1_k127_9571828_9 Virulence factor BrkB K07058 - - 0.000000000001211 78.0
BYD1_k127_9581738_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 9.49e-220 693.0
BYD1_k127_9581738_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000001774 215.0
BYD1_k127_9581738_2 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000001619 133.0
BYD1_k127_9595900_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004593 471.0
BYD1_k127_9595900_1 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 441.0
BYD1_k127_9595900_2 MMPL family K07003 - - 0.0000000000000000000002085 113.0
BYD1_k127_9596971_0 Multicopper oxidase - - - 0.0 1163.0
BYD1_k127_9596971_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 411.0
BYD1_k127_9596971_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 386.0
BYD1_k127_9596971_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 384.0
BYD1_k127_9596971_4 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000005067 202.0
BYD1_k127_9596971_5 histidine kinase - - - 0.0000000000000000000000000000000000000000000000002454 191.0
BYD1_k127_9667049_0 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 427.0
BYD1_k127_9667049_1 PFAM phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008468 385.0
BYD1_k127_9667049_10 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000005366 173.0
BYD1_k127_9667049_11 Bacterial extracellular solute-binding proteins, family 3 - - - 0.00000000000000000000000000000001836 133.0
BYD1_k127_9667049_12 Histidine kinase - - - 0.0000000000000000000000000000003292 133.0
BYD1_k127_9667049_13 Probable zinc-ribbon domain K03704 - - 0.000000000000000000001777 98.0
BYD1_k127_9667049_14 - - - - 0.0000000000009922 68.0
BYD1_k127_9667049_15 D12 class N6 adenine-specific DNA methyltransferase K07318 - 2.1.1.72 0.00000001302 66.0
BYD1_k127_9667049_16 DnaJ (Hsp40) homolog, subfamily C , member 25 K19371 - - 0.00000009752 64.0
BYD1_k127_9667049_2 peptidase M20 K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 383.0
BYD1_k127_9667049_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 317.0
BYD1_k127_9667049_4 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 310.0
BYD1_k127_9667049_5 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005134 282.0
BYD1_k127_9667049_6 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.00000000000000000000000000000000000000000000000000000000000000007981 230.0
BYD1_k127_9667049_7 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000001019 214.0
BYD1_k127_9667049_8 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000006285 224.0
BYD1_k127_9667049_9 Protein of unknown function DUF47 K07220 - - 0.00000000000000000000000000000000000000000000002349 177.0
BYD1_k127_9713145_0 AMP-binding enzyme K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007654 509.0
BYD1_k127_9713145_1 cytochrome C peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008836 370.0
BYD1_k127_9713145_2 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000003184 244.0
BYD1_k127_9713145_3 MTH538 TIR-like domain (DUF1863) - - - 0.00000000000000000000000000000000000000002232 176.0
BYD1_k127_9713145_4 Evidence 4 Homologs of previously reported genes of K21440 - - 0.00000000000000000000000000000001506 135.0
BYD1_k127_9713145_5 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000001229 121.0
BYD1_k127_9757563_0 TIGRFAM amino acid adenylation domain - - - 2.049e-255 815.0
BYD1_k127_9771074_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 454.0
BYD1_k127_9771074_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 422.0
BYD1_k127_9771074_2 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.0000000000000000000000000000000000000000000000000000000000000000000000009535 249.0
BYD1_k127_9771074_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000529 225.0
BYD1_k127_9771074_4 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000001789 192.0
BYD1_k127_9844126_0 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000006778 173.0
BYD1_k127_9844126_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000004198 130.0
BYD1_k127_9844126_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000004554 92.0
BYD1_k127_9844126_3 Peptidase M16 inactive domain protein - - - 0.0000000000009852 82.0
BYD1_k127_9856881_0 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 517.0
BYD1_k127_9856881_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 412.0
BYD1_k127_9856881_2 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 360.0
BYD1_k127_9856881_3 Male sterility protein - - - 0.000000000000000000000000000000000000000000000000000000005635 207.0
BYD1_k127_9856881_4 - K07018 - - 0.0000000000000000000000000000000000000000000000002286 183.0
BYD1_k127_9856881_5 photosynthesis - - - 0.0000000000000000000000000000000000000000003293 164.0
BYD1_k127_9856881_6 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000009528 124.0
BYD1_k127_9856881_7 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000003199 109.0
BYD1_k127_9857004_0 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006567 434.0
BYD1_k127_9857004_1 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 349.0
BYD1_k127_9857004_2 Protein of unknown function (DUF1572) - - - 0.00000000000000000000000000000000000000000000000000000000000000003697 227.0
BYD1_k127_9857004_3 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000001562 191.0
BYD1_k127_9857004_4 dUTP metabolic process K01520,K13886,K21286 GO:0000166,GO:0000287,GO:0001889,GO:0003674,GO:0003824,GO:0004170,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006163,GO:0006195,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006259,GO:0006260,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010469,GO:0010646,GO:0010648,GO:0014070,GO:0015949,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0023051,GO:0023057,GO:0030545,GO:0030547,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032552,GO:0032556,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0034655,GO:0035862,GO:0035863,GO:0035870,GO:0036094,GO:0042221,GO:0042975,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043497,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0048513,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051098,GO:0051259,GO:0051260,GO:0055086,GO:0061008,GO:0065003,GO:0065007,GO:0065009,GO:0070013,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0072529,GO:0090304,GO:0090407,GO:0097159,GO:0097367,GO:0098772,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:2000272 3.5.1.122,3.6.1.23 0.0000000000000000000000000000000000000004889 152.0
BYD1_k127_9857004_5 Periplasmic or secreted lipoprotein - - - 0.000000001124 72.0
BYD1_k127_9864338_0 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 452.0
BYD1_k127_9864338_1 Tetratricopeptide repeats K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000005466 246.0
BYD1_k127_9864338_2 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000009715 208.0
BYD1_k127_9864338_3 Isocitrate/isopropylmalate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000001856 183.0
BYD1_k127_9873690_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1247.0
BYD1_k127_9873690_1 TonB-dependent Receptor Plug K16090 - - 5.153e-269 850.0
BYD1_k127_9873690_10 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K13832 - 1.1.1.25,4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 316.0
BYD1_k127_9873690_11 Histone deacetylase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 297.0
BYD1_k127_9873690_12 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000003533 247.0
BYD1_k127_9873690_13 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000005254 240.0
BYD1_k127_9873690_14 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008191 237.0
BYD1_k127_9873690_15 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000009825 215.0
BYD1_k127_9873690_16 actin binding - - - 0.0000000000000000000000000000000000000003937 166.0
BYD1_k127_9873690_17 PFAM ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000001519 154.0
BYD1_k127_9873690_18 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 2.7.8.5 0.00000000000000000000000000000000002357 149.0
BYD1_k127_9873690_19 Uncharacterized conserved protein (DUF2203) - - - 0.000000000000000000001235 99.0
BYD1_k127_9873690_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005024 634.0
BYD1_k127_9873690_20 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000003463 84.0
BYD1_k127_9873690_21 - - - - 0.0000007529 52.0
BYD1_k127_9873690_22 Lysin motif - - - 0.0000008382 61.0
BYD1_k127_9873690_24 transcriptional regulator - - - 0.00002382 51.0
BYD1_k127_9873690_25 hyperosmotic response K04065 - - 0.000156 51.0
BYD1_k127_9873690_26 RDD family - - - 0.0002118 53.0
BYD1_k127_9873690_3 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 530.0
BYD1_k127_9873690_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 455.0
BYD1_k127_9873690_5 PepSY-associated TM region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007375 392.0
BYD1_k127_9873690_6 ThiF family K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 374.0
BYD1_k127_9873690_7 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 387.0
BYD1_k127_9873690_8 2OG-Fe(II) oxygenase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 357.0
BYD1_k127_9873690_9 peptidyl-lysine modification to peptidyl-hypusine - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006859 343.0
BYD1_k127_987573_0 Proprotein convertase P-domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005281 275.0
BYD1_k127_987573_1 PFAM Organic solvent tolerance protein K04744 - - 0.000000000000000000000000000000000000000000001045 184.0
BYD1_k127_9894367_0 Tricorn protease C1 domain K08676 - - 1.052e-306 962.0
BYD1_k127_9894367_1 peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 541.0
BYD1_k127_9894367_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 470.0
BYD1_k127_9894367_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 335.0
BYD1_k127_9894367_4 acetyltransferase - - - 0.00000000000000000000000000000000000000000002138 168.0
BYD1_k127_9905244_0 Uncharacterised protein family (UPF0182) K09118 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 531.0
BYD1_k127_9905244_1 SMART tyrosine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 374.0