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Overview

ID MAG00020
Name BYD1_bin.30
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Bacteroidota
Class Bacteroidia
Order Bacteroidales
Family Lentimicrobiaceae
Genus Lentimicrobium
Species
Assembly information
Completeness (%) 96.91
Contamination (%) 0.11
GC content (%) 41.0
N50 (bp) 27,193
Genome size (bp) 3,205,668

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2606

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10018549_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 433.0
BYD1_k127_10018549_1 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002059 277.0
BYD1_k127_10031707_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 2.06e-241 755.0
BYD1_k127_10031707_1 Aldehyde dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 539.0
BYD1_k127_10031707_10 - - - - 0.0000000000000000000000000000000000000000000001181 175.0
BYD1_k127_10031707_11 Domain of unknown function (DUF4974) - - - 0.0000000000000000000000000000000000000000002601 171.0
BYD1_k127_10031707_12 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000000000001883 155.0
BYD1_k127_10031707_13 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000005048 143.0
BYD1_k127_10031707_14 - - - - 0.0000000000000000000000000000000000007963 152.0
BYD1_k127_10031707_15 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000000000000000001202 141.0
BYD1_k127_10031707_16 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000005044 144.0
BYD1_k127_10031707_17 cellular response to DNA damage stimulus K07340 - - 0.000000000000000000000000000000001007 134.0
BYD1_k127_10031707_18 Acetyltransferase - - - 0.00000000000000000000000000004642 119.0
BYD1_k127_10031707_19 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000007463 113.0
BYD1_k127_10031707_2 PFAM Band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 449.0
BYD1_k127_10031707_20 peptidase activity, acting on L-amino acid peptides - - - 0.000000000000000000002145 104.0
BYD1_k127_10031707_21 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000001417 84.0
BYD1_k127_10031707_22 - - - - 0.00000000002864 72.0
BYD1_k127_10031707_24 alginic acid biosynthetic process - - - 0.0000001 66.0
BYD1_k127_10031707_25 TonB-linked outer membrane protein, SusC RagA family - - - 0.000003874 59.0
BYD1_k127_10031707_3 Tricorn protease C1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 346.0
BYD1_k127_10031707_4 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 318.0
BYD1_k127_10031707_5 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003373 260.0
BYD1_k127_10031707_6 DUF218 domain K03748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006996 252.0
BYD1_k127_10031707_7 Hydrolase, alpha beta domain protein K01048 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000002028 256.0
BYD1_k127_10031707_8 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000003227 241.0
BYD1_k127_10031707_9 Alpha/beta hydrolase family - GO:0003674,GO:0003824,GO:0016787 - 0.00000000000000000000000000000000000000000000000007312 188.0
BYD1_k127_10068266_0 COG COG0383 Alpha-mannosidase - - - 1.648e-309 983.0
BYD1_k127_10068266_1 Carbohydrate-binding domain-containing protein Cthe_2159 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 383.0
BYD1_k127_10068266_2 Belongs to the serpin family K13963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009413 360.0
BYD1_k127_10068266_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000006969 222.0
BYD1_k127_10068266_4 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000000000001781 191.0
BYD1_k127_10068266_5 VTC domain - - - 0.0000000000000000000000000000000000000000000000001173 186.0
BYD1_k127_10068266_6 Protein of unknown function (DUF1761) - - - 0.000000000000000000000000000000009444 131.0
BYD1_k127_10068266_7 Histidine kinase - - - 0.00000000000000000035 90.0
BYD1_k127_10068266_8 Protein of unknown function (DUF2490) - - - 0.00000000000000001149 92.0
BYD1_k127_10068266_9 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000001052 51.0
BYD1_k127_10296127_0 FAD linked oxidases, C-terminal domain - - - 0.0 1231.0
BYD1_k127_10296127_1 Ribosomal protein S1-like RNA-binding domain K02945 - - 5.453e-292 909.0
BYD1_k127_10296127_10 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 460.0
BYD1_k127_10296127_11 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007659 411.0
BYD1_k127_10296127_12 YceG-like family K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 341.0
BYD1_k127_10296127_13 DUF1338 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 320.0
BYD1_k127_10296127_14 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 312.0
BYD1_k127_10296127_15 Rhodanese Homology Domain K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005374 302.0
BYD1_k127_10296127_16 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 304.0
BYD1_k127_10296127_17 Bacterial lipoate protein ligase C-terminus K03800 - 6.3.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 290.0
BYD1_k127_10296127_18 ThiF family K22132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002452 277.0
BYD1_k127_10296127_19 Predicted periplasmic lipoprotein (DUF2279) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009519 264.0
BYD1_k127_10296127_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 4.101e-251 784.0
BYD1_k127_10296127_20 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000001982 226.0
BYD1_k127_10296127_21 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.0000000000000000000000000000000000000000000009814 170.0
BYD1_k127_10296127_22 cheY-homologous receiver domain - - - 0.000000000000000000000007394 106.0
BYD1_k127_10296127_3 penicillin-binding protein 1C K05367 - 2.4.1.129 1.012e-225 723.0
BYD1_k127_10296127_4 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K01008,K04487 - 2.7.9.3,2.8.1.7 1.484e-224 717.0
BYD1_k127_10296127_5 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 533.0
BYD1_k127_10296127_6 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008502 549.0
BYD1_k127_10296127_7 YidC periplasmic domain K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 512.0
BYD1_k127_10296127_8 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0016966,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363 1.7.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 481.0
BYD1_k127_10296127_9 peptidase Do - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 467.0
BYD1_k127_10642814_0 DALR_2 K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 9.572e-226 707.0
BYD1_k127_10642814_1 Oligoendopeptidase f K01283 - 3.4.15.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 561.0
BYD1_k127_10642814_2 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 512.0
BYD1_k127_10642814_3 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 332.0
BYD1_k127_10642814_4 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 286.0
BYD1_k127_10642814_5 Domain of unknown function (DUF4403) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001971 268.0
BYD1_k127_10642814_6 CAAX amino terminal protease family K07052 - - 0.0000000000000000000000000000000000000000001275 171.0
BYD1_k127_10642814_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000001295 145.0
BYD1_k127_10642814_8 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000000000006389 128.0
BYD1_k127_10732740_0 RQC K03654 - 3.6.4.12 0.0 1018.0
BYD1_k127_10732740_1 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 532.0
BYD1_k127_10732740_10 PFAM surface antigen variable number repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000009944 245.0
BYD1_k127_10732740_11 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002433 233.0
BYD1_k127_10732740_12 - - - - 0.0000000000000000000000000000000000000000000000000004363 196.0
BYD1_k127_10732740_13 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000001755 184.0
BYD1_k127_10732740_14 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000001979 161.0
BYD1_k127_10732740_15 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000001355 133.0
BYD1_k127_10732740_16 - - - - 0.0000000000000000000000000000175 127.0
BYD1_k127_10732740_17 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000000000000000009907 120.0
BYD1_k127_10732740_18 Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000003961 93.0
BYD1_k127_10732740_19 AhpC/TSA family - - - 0.0000000000001144 78.0
BYD1_k127_10732740_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006065 406.0
BYD1_k127_10732740_3 ABC transporter, ATP-binding protein K06861 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003771 380.0
BYD1_k127_10732740_4 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 385.0
BYD1_k127_10732740_5 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006537 347.0
BYD1_k127_10732740_6 PFAM Type II secretion system protein E K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 319.0
BYD1_k127_10732740_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 291.0
BYD1_k127_10732740_8 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002597 290.0
BYD1_k127_10732740_9 Alpha/beta hydrolase family K01175 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016788,GO:0016790,GO:0044424,GO:0044444,GO:0044464,GO:0052689 - 0.000000000000000000000000000000000000000000000000000000000000000000000000003235 260.0
BYD1_k127_10808798_0 Domain of unknown function K03737 - 1.2.7.1 0.0 1839.0
BYD1_k127_10808798_1 associated with various cellular activities K03695,K03696 - - 0.0 1217.0
BYD1_k127_10808798_10 NQR2, RnfD, RnfE family K00347 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 531.0
BYD1_k127_10808798_11 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 522.0
BYD1_k127_10808798_12 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) K00346 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 499.0
BYD1_k127_10808798_13 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 475.0
BYD1_k127_10808798_14 protein histidine kinase activity K02484,K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 383.0
BYD1_k127_10808798_15 Dihydroorotate dehydrogenase K00226 - 1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 343.0
BYD1_k127_10808798_16 Rnf-Nqr subunit, membrane protein K00350 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 330.0
BYD1_k127_10808798_17 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 331.0
BYD1_k127_10808798_18 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol K00349 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005746 330.0
BYD1_k127_10808798_19 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 318.0
BYD1_k127_10808798_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K05587,K18331 - 1.12.1.3,1.6.5.3 3.025e-246 776.0
BYD1_k127_10808798_20 Domain of unknown function (DUF5103) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 324.0
BYD1_k127_10808798_21 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004395 316.0
BYD1_k127_10808798_22 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 304.0
BYD1_k127_10808798_23 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000001745 266.0
BYD1_k127_10808798_24 5'-nucleotidase, lipoprotein e(P4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001054 253.0
BYD1_k127_10808798_25 FMN_bind K00348 - 1.6.5.8 0.0000000000000000000000000000000000000000000000000000000000000005646 228.0
BYD1_k127_10808798_26 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.0000000000000000000000000000000000000000000000000000000002795 209.0
BYD1_k127_10808798_27 Thioredoxin-like [2Fe-2S] ferredoxin K00334,K17999 - 1.12.1.4,1.6.5.3 0.00000000000000000000000000000000000000001669 158.0
BYD1_k127_10808798_28 response regulator, receiver K07814 - - 0.00000000000000000000000000000000000002834 147.0
BYD1_k127_10808798_29 CoA-binding protein K06929 - - 0.00000000000000000000000000000000000004072 146.0
BYD1_k127_10808798_3 In Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and IscS K03150 - 4.1.99.19 3.89e-221 694.0
BYD1_k127_10808798_30 - - - - 0.000000000000000000000000001275 119.0
BYD1_k127_10808798_31 PKD domain - - - 0.000000000000000003336 98.0
BYD1_k127_10808798_32 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.000000000000000009525 85.0
BYD1_k127_10808798_33 - - - - 0.000000000007721 69.0
BYD1_k127_10808798_34 - - - - 0.0000001576 56.0
BYD1_k127_10808798_35 signal peptide peptidase SppA, 36K type K04773 - - 0.0009222 42.0
BYD1_k127_10808798_4 Putative Fe-S cluster K02482 - 2.7.13.3 7.941e-213 680.0
BYD1_k127_10808798_5 NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway K00351 - 1.6.5.8 6.217e-207 649.0
BYD1_k127_10808798_6 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 4.736e-202 635.0
BYD1_k127_10808798_7 Iron hydrogenase small subunit K00123,K00336,K18332 - 1.12.1.3,1.17.1.9,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 606.0
BYD1_k127_10808798_8 Putative Fe-S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 586.0
BYD1_k127_10808798_9 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002091 550.0
BYD1_k127_11003191_0 DNA-directed DNA polymerase K02337 - 2.7.7.7 0.0 1510.0
BYD1_k127_11003191_1 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family - - - 2.683e-241 760.0
BYD1_k127_11003191_10 outer membrane autotransporter barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005571 256.0
BYD1_k127_11003191_11 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000001181 197.0
BYD1_k127_11003191_12 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000000001113 190.0
BYD1_k127_11003191_13 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000002599 181.0
BYD1_k127_11003191_14 DNA uptake protein and related DNA-binding - - - 0.0000000000000000000000000000000000000000000000001733 188.0
BYD1_k127_11003191_15 - - - - 0.000000000000000000000000000000000000000000000009698 175.0
BYD1_k127_11003191_16 Cytochrome c - - - 0.000000000000000000000006304 105.0
BYD1_k127_11003191_17 PFAM Receptor L domain - - - 0.0000000000000000001871 98.0
BYD1_k127_11003191_18 Protein of unknown function (DUF493) K09158 - - 0.000000000000000006946 86.0
BYD1_k127_11003191_19 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000041 70.0
BYD1_k127_11003191_2 Endoribonuclease that initiates mRNA decay K18682 - - 2.537e-226 711.0
BYD1_k127_11003191_20 - - - - 0.00000001066 66.0
BYD1_k127_11003191_21 - - - - 0.00000008038 57.0
BYD1_k127_11003191_22 - - - - 0.00009557 54.0
BYD1_k127_11003191_23 - - - - 0.0004167 46.0
BYD1_k127_11003191_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004932 526.0
BYD1_k127_11003191_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 471.0
BYD1_k127_11003191_5 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 400.0
BYD1_k127_11003191_6 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 372.0
BYD1_k127_11003191_7 Catalyzes the conversion of dihydroorotate to orotate K00226 - 1.3.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 366.0
BYD1_k127_11003191_8 COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 338.0
BYD1_k127_11003191_9 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003126 323.0
BYD1_k127_1100813_0 glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 455.0
BYD1_k127_1100813_1 Aldo Keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 344.0
BYD1_k127_1100813_2 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002042 295.0
BYD1_k127_1100813_3 PFAM Outer membrane protein, OmpA MotB, C-terminal - - - 0.00000000000000000000000000000000000000000000000005739 193.0
BYD1_k127_1100813_4 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000003305 138.0
BYD1_k127_1100813_5 C-terminal domain of CHU protein family - - - 0.00000000000007154 86.0
BYD1_k127_11182056_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1738.0
BYD1_k127_11182056_1 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 4.502e-210 668.0
BYD1_k127_11182056_2 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 471.0
BYD1_k127_11182056_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006758 299.0
BYD1_k127_11182056_4 Concanavalin A-like lectin/glucanases superfamily - - - 0.0000000000000000774 92.0
BYD1_k127_11182056_5 AMP-binding enzyme K01897 - 6.2.1.3 0.000000812 53.0
BYD1_k127_11214818_0 Peptidase family M49 K01277 - 3.4.14.4 6.403e-282 881.0
BYD1_k127_11214818_1 Rho termination factor, N-terminal domain K03628 - - 1.371e-212 679.0
BYD1_k127_11214818_10 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000005415 231.0
BYD1_k127_11214818_11 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000005735 222.0
BYD1_k127_11214818_12 Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein) K03620,K08354 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000002056 203.0
BYD1_k127_11214818_13 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.000000000000000000000000000000000000000000000000000001165 199.0
BYD1_k127_11214818_14 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000008709 192.0
BYD1_k127_11214818_15 2-phosphosulpholactate phosphatase K05979 - 3.1.3.71 0.00000000000000000000000000000000000000000000000000002798 196.0
BYD1_k127_11214818_16 Protein conserved in bacteria K09922 - - 0.00000000000000000000000000000000000000000001863 163.0
BYD1_k127_11214818_17 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000959 150.0
BYD1_k127_11214818_18 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000007826 152.0
BYD1_k127_11214818_19 Haem-binding domain - - - 0.0000000000000000000000000000000000004095 146.0
BYD1_k127_11214818_2 denitrification pathway K15876 GO:0003674,GO:0003824,GO:0005575,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016491,GO:0022900,GO:0031224,GO:0044237,GO:0044425,GO:0045333,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 578.0
BYD1_k127_11214818_20 cytochrome C - - - 0.000000000000000000000000000001973 125.0
BYD1_k127_11214818_21 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000005109 117.0
BYD1_k127_11214818_22 - - - - 0.00000000000000000000001128 115.0
BYD1_k127_11214818_23 Cytochrome c - - - 0.000000000000248 75.0
BYD1_k127_11214818_3 COG0798 Arsenite efflux pump ACR3 and related K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 529.0
BYD1_k127_11214818_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 512.0
BYD1_k127_11214818_5 ubiE/COQ5 methyltransferase family K00574,K07755 - 2.1.1.137,2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 355.0
BYD1_k127_11214818_6 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007958 340.0
BYD1_k127_11214818_7 PFAM Integral membrane protein TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 324.0
BYD1_k127_11214818_8 denitrification pathway - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001193 268.0
BYD1_k127_11214818_9 Lipid A 3-O-deacylase (PagL) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009105 255.0
BYD1_k127_11234805_0 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 1.17e-286 896.0
BYD1_k127_11234805_1 Fibronectin type III-like domain K05349 - 3.2.1.21 1.074e-228 728.0
BYD1_k127_11234805_10 KaiB K08481 - - 0.00000000000000000000000000000000003086 137.0
BYD1_k127_11234805_11 DoxX K15977 - - 0.0000000000000000000000000000003237 128.0
BYD1_k127_11234805_12 Psort location CytoplasmicMembrane, score K09790 - - 0.000000000000000000000000000002769 124.0
BYD1_k127_11234805_14 Decreases the phosphorylation of KaiC, a component of the main circadian regulator in cyanobacteria K08481 - - 0.000000000000000000000004482 101.0
BYD1_k127_11234805_16 Heavy-metal-associated domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000000005755 71.0
BYD1_k127_11234805_17 Domain of unknown function (DUF4190) - - - 0.0000002274 60.0
BYD1_k127_11234805_18 - - - - 0.0006581 50.0
BYD1_k127_11234805_2 chitinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005733 558.0
BYD1_k127_11234805_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 421.0
BYD1_k127_11234805_4 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 403.0
BYD1_k127_11234805_5 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000508 360.0
BYD1_k127_11234805_6 Two component regulator three Y - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001712 302.0
BYD1_k127_11234805_7 COGs COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002592 226.0
BYD1_k127_11234805_8 COG1680 Beta-lactamase class C and other penicillin binding K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000005158 202.0
BYD1_k127_11234805_9 - - - - 0.00000000000000000000000000000000000005375 160.0
BYD1_k127_11256102_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0 1138.0
BYD1_k127_11256102_1 Selenocysteine lyase - - - 2.349e-229 718.0
BYD1_k127_11256102_10 cheY-homologous receiver domain - - - 0.0000000000000000000000000000003189 127.0
BYD1_k127_11256102_11 Tetratricopeptide repeat - - - 0.000000000002131 81.0
BYD1_k127_11256102_14 Recombinase - - - 0.0001754 45.0
BYD1_k127_11256102_2 PFAM Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 387.0
BYD1_k127_11256102_3 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008242 346.0
BYD1_k127_11256102_4 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004405 313.0
BYD1_k127_11256102_5 DNA mismatch repair protein MutT K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 295.0
BYD1_k127_11256102_6 Lipid A Biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000003734 218.0
BYD1_k127_11256102_7 acid phosphatase activity K01727 - 4.2.2.1 0.0000000000000000000000000000000000000000000000007438 195.0
BYD1_k127_11256102_8 - - - - 0.000000000000000000000000000000000000000000000001203 183.0
BYD1_k127_11256102_9 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000002162 185.0
BYD1_k127_11256654_0 Domain of unknown function (DUF5110) K01187 - 3.2.1.20 1.918e-294 923.0
BYD1_k127_11256654_1 TonB-dependent Receptor Plug Domain - - - 8.868e-243 779.0
BYD1_k127_11256654_10 repeat protein - - - 0.000000000000001606 83.0
BYD1_k127_11256654_11 - - - - 0.00000000000004642 83.0
BYD1_k127_11256654_2 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 609.0
BYD1_k127_11256654_3 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 416.0
BYD1_k127_11256654_4 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004573 366.0
BYD1_k127_11256654_5 Endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 349.0
BYD1_k127_11256654_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000002206 245.0
BYD1_k127_11256654_7 Transposase - - - 0.0000000000000000000000000000000000000000000000000001929 196.0
BYD1_k127_11256654_8 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000000000006493 151.0
BYD1_k127_11256654_9 Domain of unknown function (DUF5017) - - - 0.00000000000000009318 83.0
BYD1_k127_11265132_0 PFAM PKD domain - - - 0.0000000000000000000000000000000000000000000000000000000000005487 241.0
BYD1_k127_11265132_1 C-terminal domain of CHU protein family - - - 0.000000000000000000005463 110.0
BYD1_k127_11381867_0 peptidase activity, acting on L-amino acid peptides K01337,K05994,K20276 - 3.4.11.10,3.4.21.50 0.0000000000000000000000000000000000000000000000000000000000000000000005876 261.0
BYD1_k127_11381867_1 RibD C-terminal domain - - - 0.000000000000003401 75.0
BYD1_k127_11381867_2 Proprotein convertase P-domain - - - 0.0000002661 64.0
BYD1_k127_11381867_3 Pkd domain containing protein - - - 0.0008197 52.0
BYD1_k127_11385740_0 Y_Y_Y domain - - - 0.0 1037.0
BYD1_k127_11385740_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004472 510.0
BYD1_k127_11385740_11 Pkd domain containing protein - - - 0.0000004439 56.0
BYD1_k127_11385740_12 Tellurite resistance protein TerB - - - 0.0000005956 57.0
BYD1_k127_11385740_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 522.0
BYD1_k127_11385740_3 NAD(P)( ) transhydrogenase (AB-specific), alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 486.0
BYD1_k127_11385740_4 LAO AO transport system ATPase K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 431.0
BYD1_k127_11385740_5 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 373.0
BYD1_k127_11385740_6 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000004221 190.0
BYD1_k127_11385740_7 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000003102 143.0
BYD1_k127_11385740_8 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 - 1.6.1.2 0.000000000000000000000000000000000001094 141.0
BYD1_k127_11385740_9 PFAM Family of - - - 0.00000000000000000002467 96.0
BYD1_k127_11410403_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1159.0
BYD1_k127_11410403_1 SpoU rRNA Methylase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002862 240.0
BYD1_k127_11410403_2 Belongs to the aldehyde dehydrogenase family K00128,K00129 - 1.2.1.3,1.2.1.5 0.000000000000000000000000000000000000000000000000000000776 198.0
BYD1_k127_11422629_0 TonB-dependent receptor - - - 2.644e-194 635.0
BYD1_k127_11422629_1 Belongs to the DEAD box helicase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 466.0
BYD1_k127_11422629_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 462.0
BYD1_k127_11422629_3 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000009569 187.0
BYD1_k127_11422629_4 PFAM PKD domain - - - 0.000000000000000000000000000000000000000003515 166.0
BYD1_k127_11422629_5 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000002732 137.0
BYD1_k127_11422629_6 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000001099 131.0
BYD1_k127_11422629_7 Pyridine nucleotide-disulphide oxidoreductase, dimerisation - - - 0.0000000000003451 73.0
BYD1_k127_11518737_0 - - - - 1.327e-239 754.0
BYD1_k127_11518737_1 Pfam:DUF377 K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 544.0
BYD1_k127_11518737_2 Transporter, major facilitator family K08222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008021 514.0
BYD1_k127_11518737_3 TonB-dependent receptor plug domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 482.0
BYD1_k127_11572_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1099.0
BYD1_k127_11572_1 peptidase activity, acting on L-amino acid peptides K05996 - 3.4.17.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 445.0
BYD1_k127_11605525_0 TonB dependent receptor - - - 9.325e-305 963.0
BYD1_k127_11605525_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 514.0
BYD1_k127_11605525_2 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008748 470.0
BYD1_k127_11605525_3 helix_turn _helix lactose operon repressor K02529,K05499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008305 440.0
BYD1_k127_11605525_4 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 312.0
BYD1_k127_11605525_5 Outer membrane protein SusF_SusE K21571 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005975,GO:0005976,GO:0005982,GO:0006073,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030246,GO:0030247,GO:0030312,GO:0030313,GO:0031975,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044462,GO:0044464,GO:0071704,GO:0071944,GO:2001070 - 0.00000000000000000000000000000000000000000000000000000000238 208.0
BYD1_k127_11717653_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1283.0
BYD1_k127_11717653_1 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 0.0 1084.0
BYD1_k127_11717653_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 586.0
BYD1_k127_11717653_11 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 541.0
BYD1_k127_11717653_12 PFAM Transketolase, C-terminal domain K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 518.0
BYD1_k127_11717653_13 glycosyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 478.0
BYD1_k127_11717653_14 S4 RNA-binding domain K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 468.0
BYD1_k127_11717653_15 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00226,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000738 447.0
BYD1_k127_11717653_16 PFAM von Willebrand factor type A domain K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 441.0
BYD1_k127_11717653_17 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 402.0
BYD1_k127_11717653_18 Transketolase K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 399.0
BYD1_k127_11717653_19 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 391.0
BYD1_k127_11717653_2 Belongs to the glycosyl hydrolase 43 family - - - 5.205e-306 944.0
BYD1_k127_11717653_20 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003391 392.0
BYD1_k127_11717653_21 NeuB family K01654,K18430 - 2.5.1.101,2.5.1.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002398 383.0
BYD1_k127_11717653_22 Nucleotidyl transferase K15669 - 2.7.7.71 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 356.0
BYD1_k127_11717653_23 Pkd domain containing protein K01337 - 3.4.21.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005479 355.0
BYD1_k127_11717653_24 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 339.0
BYD1_k127_11717653_25 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007858 336.0
BYD1_k127_11717653_26 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 325.0
BYD1_k127_11717653_27 UDP-N-acetylglucosamine 2-epimerase K18429 - 3.2.1.184 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005518 323.0
BYD1_k127_11717653_28 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000325 302.0
BYD1_k127_11717653_29 ribonuclease BN K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 301.0
BYD1_k127_11717653_3 Glycosyl hydrolase family 3 N terminal domain - - - 1.676e-256 822.0
BYD1_k127_11717653_30 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001418 291.0
BYD1_k127_11717653_31 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001114 278.0
BYD1_k127_11717653_32 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009878 278.0
BYD1_k127_11717653_33 COG NOG25960 non supervised orthologous group - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006104 283.0
BYD1_k127_11717653_34 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000005703 265.0
BYD1_k127_11717653_35 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000001345 256.0
BYD1_k127_11717653_36 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000005034 251.0
BYD1_k127_11717653_37 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000654 248.0
BYD1_k127_11717653_38 Cytidylyltransferase K00983 - 2.7.7.43 0.00000000000000000000000000000000000000000000000000000000000000000000007521 246.0
BYD1_k127_11717653_39 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000001198 237.0
BYD1_k127_11717653_4 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 2.269e-249 787.0
BYD1_k127_11717653_40 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000002108 216.0
BYD1_k127_11717653_42 Bacterial transferase hexapeptide (six repeats) K19429 - - 0.000000000000000000000000000000000000000000000000000000000111 210.0
BYD1_k127_11717653_43 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000003957 210.0
BYD1_k127_11717653_44 - - - - 0.0000000000000000000000000000000000000000000000000000001077 218.0
BYD1_k127_11717653_45 Predicted SPOUT methyltransferase K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000007399 189.0
BYD1_k127_11717653_46 TM2 domain - - - 0.0000000000000000000000000000000000000000067 156.0
BYD1_k127_11717653_47 PASTA domain protein K01921,K08884,K12132 - 2.7.11.1,6.3.2.4 0.00000000000000000000000000000000000007669 153.0
BYD1_k127_11717653_48 COG NOG14473 non supervised orthologous group - - - 0.0000000000000000000000000000000000009703 145.0
BYD1_k127_11717653_49 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000006602 152.0
BYD1_k127_11717653_5 Prolyl oligopeptidase family - - - 2.407e-244 771.0
BYD1_k127_11717653_50 PFAM transcription elongation factor GreA GreB K06140 - - 0.000000000000000000000004078 108.0
BYD1_k127_11717653_51 - K11934 - - 0.00000000000000000000001795 108.0
BYD1_k127_11717653_52 Domain of unknown function (DUF4783) - - - 0.00000000000000000004431 94.0
BYD1_k127_11717653_53 Protein of unknown function (DUF2752) - - - 0.00000000000000000006485 93.0
BYD1_k127_11717653_54 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000000001568 89.0
BYD1_k127_11717653_55 cyclic nucleotide binding K01420,K10914,K21556,K21562 - - 0.000000000000000005823 88.0
BYD1_k127_11717653_56 - - - - 0.0000000000006749 75.0
BYD1_k127_11717653_57 - - - - 0.0000006909 61.0
BYD1_k127_11717653_58 - - - - 0.000003718 57.0
BYD1_k127_11717653_59 Polysaccharide biosynthesis protein - - - 0.000008402 58.0
BYD1_k127_11717653_6 Outer membrane receptor K16087 - - 1.434e-240 767.0
BYD1_k127_11717653_60 - - - - 0.00005131 46.0
BYD1_k127_11717653_7 protein conserved in bacteria - - - 6.398e-220 689.0
BYD1_k127_11717653_8 Psort location CytoplasmicMembrane, score 10.00 - - - 4.873e-218 702.0
BYD1_k127_11717653_9 Xaa-His dipeptidase K01270 - - 1.697e-205 649.0
BYD1_k127_11751011_0 cysteate synthase K15527 - 2.5.1.76 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 548.0
BYD1_k127_11751011_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 514.0
BYD1_k127_11751011_10 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000001 190.0
BYD1_k127_11751011_11 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000001613 160.0
BYD1_k127_11751011_12 Tryptophanase K01667 - 4.1.99.1 0.0000000001061 62.0
BYD1_k127_11751011_2 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 419.0
BYD1_k127_11751011_3 Sodium Bile acid symporter family K03453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 349.0
BYD1_k127_11751011_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000003148 236.0
BYD1_k127_11751011_5 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.000000000000000000000000000000000000000000000000000000000000007646 222.0
BYD1_k127_11751011_6 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000002513 216.0
BYD1_k127_11751011_7 Catalyzes the attachment of glycine to tRNA(Gly) K01880 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000006302 200.0
BYD1_k127_11751011_8 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000001675 203.0
BYD1_k127_11751011_9 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000001477 188.0
BYD1_k127_11796543_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 403.0
BYD1_k127_11796543_1 DNA mismatch repair protein MutS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 368.0
BYD1_k127_11796543_2 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000001127 181.0
BYD1_k127_11823720_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.0 1420.0
BYD1_k127_11823720_1 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 3.142e-282 874.0
BYD1_k127_11823720_2 Alanine dehydrogenase/PNT, N-terminal domain K00290,K14157 - 1.5.1.7,1.5.1.8,1.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 409.0
BYD1_k127_11823720_3 Saccharopine dehydrogenase K00293 - 1.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 396.0
BYD1_k127_11823720_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000001755 263.0
BYD1_k127_11823720_5 Fe-S-cluster oxidoreductase K06940 - - 0.00000000000000000000000001599 110.0
BYD1_k127_11995982_0 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 566.0
BYD1_k127_11995982_1 FAE1/Type III polyketide synthase-like protein K00648 GO:0003674,GO:0003824,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0071704 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006576 533.0
BYD1_k127_11995982_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 388.0
BYD1_k127_11995982_3 PHP domain K04486 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000005805 199.0
BYD1_k127_11995982_4 DNA-binding protein - - - 0.0000000000000000000000000000000000000003662 154.0
BYD1_k127_11995982_5 Ribosomal L32p protein family K02911 - - 0.00000000000000000000005606 98.0
BYD1_k127_12119971_0 Phosphate acyltransferases K01897 - 6.2.1.3 0.0 1024.0
BYD1_k127_12119971_1 Beta-eliminating lyase - - - 4.331e-202 647.0
BYD1_k127_12119971_10 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000002898 118.0
BYD1_k127_12119971_11 glyoxalase III activity K13653 - - 0.0000000000002213 73.0
BYD1_k127_12119971_12 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000008369 60.0
BYD1_k127_12119971_2 PAS domain K09155 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 546.0
BYD1_k127_12119971_3 MnmE helical domain K03650 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 485.0
BYD1_k127_12119971_4 Transmembrane secretion effector K08217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 481.0
BYD1_k127_12119971_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 467.0
BYD1_k127_12119971_6 PAS domain K09155 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 352.0
BYD1_k127_12119971_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 339.0
BYD1_k127_12119971_8 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000001052 252.0
BYD1_k127_12119971_9 Domain of unknown function (DUF1858) - - - 0.000000000000000000000000000000000000000005661 160.0
BYD1_k127_12137432_0 TonB-dependent receptor K02014 - - 3.475e-248 789.0
BYD1_k127_12137432_1 NADH ubiquinone oxidoreductase subunit K00341 - 1.6.5.3 8.79e-248 780.0
BYD1_k127_12137432_10 PFAM Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 396.0
BYD1_k127_12137432_11 Zinc-binding dehydrogenase K19745 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 379.0
BYD1_k127_12137432_12 Protein of unknown function DUF116 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 314.0
BYD1_k127_12137432_13 Domain of unknown function (DUF4162) K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000117 273.0
BYD1_k127_12137432_14 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001378 271.0
BYD1_k127_12137432_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006311 257.0
BYD1_k127_12137432_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001659 266.0
BYD1_k127_12137432_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000003851 247.0
BYD1_k127_12137432_18 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009876 234.0
BYD1_k127_12137432_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000001397 207.0
BYD1_k127_12137432_2 proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 8.303e-219 689.0
BYD1_k127_12137432_20 RDD family - - - 0.000000000000000000000000000000000000000000000000000000000547 208.0
BYD1_k127_12137432_21 Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000000262 197.0
BYD1_k127_12137432_22 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000006573 194.0
BYD1_k127_12137432_23 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000003516 190.0
BYD1_k127_12137432_24 Protein of unknown function, DUF255 - - - 0.0000000000000000000000000000000000000000000002363 173.0
BYD1_k127_12137432_25 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000003427 171.0
BYD1_k127_12137432_26 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000003143 152.0
BYD1_k127_12137432_27 multidrug resistance protein K11741 - - 0.0000000000000000000000000000000000002162 144.0
BYD1_k127_12137432_28 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0008137,GO:0008150,GO:0008152,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0030964,GO:0032991,GO:0044425,GO:0050136,GO:0055114,GO:0098796,GO:1902494 1.6.5.3 0.000000000000000000000000000000000000339 143.0
BYD1_k127_12137432_29 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000002139 134.0
BYD1_k127_12137432_3 Glycosyl hydrolase family 3 C-terminal domain K05349 - 3.2.1.21 1.522e-211 689.0
BYD1_k127_12137432_30 Thrombospondin type 3 repeat - - - 0.000000000000000000000000001361 128.0
BYD1_k127_12137432_31 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000147 121.0
BYD1_k127_12137432_32 PFAM Heavy metal transport detoxification protein K08364 - - 0.00000000000000000000006257 102.0
BYD1_k127_12137432_33 - - - - 0.0000000000000003489 82.0
BYD1_k127_12137432_34 - - - - 0.00000002666 55.0
BYD1_k127_12137432_35 - - - - 0.0000001956 54.0
BYD1_k127_12137432_4 SNF2 family N-terminal domain K08282 - 2.7.11.1 7.534e-202 663.0
BYD1_k127_12137432_5 PFAM TonB-dependent Receptor - - - 2.762e-200 648.0
BYD1_k127_12137432_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 564.0
BYD1_k127_12137432_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 538.0
BYD1_k127_12137432_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 474.0
BYD1_k127_12137432_9 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002822 395.0
BYD1_k127_12141886_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 5.923e-207 650.0
BYD1_k127_12141886_1 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 574.0
BYD1_k127_12141886_10 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002134 246.0
BYD1_k127_12141886_11 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000005003 226.0
BYD1_k127_12141886_12 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000002122 224.0
BYD1_k127_12141886_13 Glycine cleavage H-protein K02437 - - 0.0000000000000000000000000000000000000000000000000000000414 198.0
BYD1_k127_12141886_14 Domain of unknown function (DUF4837) - - - 0.00000000000000000000000000000000000000000000000000000007626 207.0
BYD1_k127_12141886_15 Motility related/secretion protein - - - 0.000000000000000000000000000000000000000000000001153 179.0
BYD1_k127_12141886_16 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.0000000000000000000000000000000000000000851 158.0
BYD1_k127_12141886_17 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000000000000000000000000000009904 158.0
BYD1_k127_12141886_18 protein conserved in bacteria - - - 0.00000000000000000000000002117 114.0
BYD1_k127_12141886_19 Outer membrane protein beta-barrel domain - - - 0.000004922 57.0
BYD1_k127_12141886_2 Belongs to the acetokinase family K00929 - 2.7.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 487.0
BYD1_k127_12141886_20 Belongs to the peptidase S8 family - - - 0.0002035 46.0
BYD1_k127_12141886_3 Carbon-nitrogen hydrolase K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 452.0
BYD1_k127_12141886_4 Lytic transglycosylase catalytic K08307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 443.0
BYD1_k127_12141886_5 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 397.0
BYD1_k127_12141886_6 phosphate butyryltransferase K00634 - 2.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004594 395.0
BYD1_k127_12141886_7 Transglycosylase SLT domain protein K18691 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 347.0
BYD1_k127_12141886_8 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 317.0
BYD1_k127_12141886_9 NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 308.0
BYD1_k127_12161502_0 KaiC K08482 - - 3.059e-207 653.0
BYD1_k127_12161502_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000001446 181.0
BYD1_k127_12161502_2 KaiB K08481 - - 0.00000000000000000000000000000000000006121 143.0
BYD1_k127_12196196_0 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007294 615.0
BYD1_k127_12196196_1 Thioredoxin reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 463.0
BYD1_k127_12196196_2 outer membrane autotransporter barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000002636 239.0
BYD1_k127_12196196_3 cellulose binding - - - 0.000000000000000000000000000000000000000004053 176.0
BYD1_k127_12196196_4 PFAM PKD domain containing protein - - - 0.00000000000000000000000000000000000005552 164.0
BYD1_k127_12196196_5 cellulose binding - - - 0.00000000000000000000000000000000001574 155.0
BYD1_k127_12196196_6 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000007121 137.0
BYD1_k127_12196196_7 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000007828 128.0
BYD1_k127_12196196_8 Conserved Protein - GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0097159,GO:1901363 - 0.000000000000000000000000001044 113.0
BYD1_k127_12196196_9 cellulose binding - - - 0.000000684 61.0
BYD1_k127_12323_0 tRNA synthetases class II core domain (F) K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 487.0
BYD1_k127_12323_1 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000009118 216.0
BYD1_k127_12323_2 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K03768 - 5.2.1.8 0.00000000000000000009906 93.0
BYD1_k127_1241484_0 alpha-glucan phosphorylase K00688,K00691,K16153 - 2.4.1.1,2.4.1.11,2.4.1.8 0.0 1606.0
BYD1_k127_1241484_1 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1214.0
BYD1_k127_1241484_10 oxidoreductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 459.0
BYD1_k127_1241484_11 Zn-dependent protease with chaperone function K03799,K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 397.0
BYD1_k127_1241484_12 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 390.0
BYD1_k127_1241484_13 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 388.0
BYD1_k127_1241484_14 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 379.0
BYD1_k127_1241484_15 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 377.0
BYD1_k127_1241484_16 KR domain K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 360.0
BYD1_k127_1241484_17 glycine decarboxylation via glycine cleavage system K02040,K02437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 366.0
BYD1_k127_1241484_18 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 339.0
BYD1_k127_1241484_19 wide pore channel activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001019 291.0
BYD1_k127_1241484_2 Transglycosylase K05366 - 2.4.1.129,3.4.16.4 1.334e-262 830.0
BYD1_k127_1241484_20 phosphorelay signal transduction system K02477,K07705,K11641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000317 274.0
BYD1_k127_1241484_21 Psort location Cytoplasmic, score 8.96 K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000002493 259.0
BYD1_k127_1241484_22 YigZ family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001647 238.0
BYD1_k127_1241484_23 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000003202 224.0
BYD1_k127_1241484_24 glycine decarboxylation via glycine cleavage system K02437 - - 0.00000000000000000000000000000000000000000000000000000005076 204.0
BYD1_k127_1241484_25 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000001082 190.0
BYD1_k127_1241484_26 PFAM DUF218 domain - - - 0.00000000000000000000000000000000000000000000000006766 186.0
BYD1_k127_1241484_27 Zn-dependent protease K06974 - - 0.000000000000000000000000000000000000000000000001533 179.0
BYD1_k127_1241484_28 Histidine kinase - - - 0.00000000000000000000000000000000000000000000009376 183.0
BYD1_k127_1241484_29 - - - - 0.000000000000000000000000000000000000000000012 169.0
BYD1_k127_1241484_3 Glycogen debranching enzyme - - - 4.494e-240 759.0
BYD1_k127_1241484_30 - - - - 0.00000000000000000000000000000000000000000005457 169.0
BYD1_k127_1241484_31 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000001991 169.0
BYD1_k127_1241484_32 Low molecular weight phosphotyrosine protein phosphatase K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000002439 163.0
BYD1_k127_1241484_33 HIT domain K19710 - 2.7.7.53 0.00000000000000000000000007481 113.0
BYD1_k127_1241484_34 PFAM Tetratricopeptide repeat - - - 0.000001831 55.0
BYD1_k127_1241484_4 acetoacetate metabolism regulatory protein AtoC K07714 K02481 - - 3.855e-214 672.0
BYD1_k127_1241484_5 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 4.076e-197 624.0
BYD1_k127_1241484_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 617.0
BYD1_k127_1241484_7 Polysulphide reductase, NrfD - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 599.0
BYD1_k127_1241484_8 Starch synthase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 585.0
BYD1_k127_1241484_9 Belongs to the glycosyl hydrolase 57 family K07405 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 579.0
BYD1_k127_1347159_0 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0 1142.0
BYD1_k127_1347159_1 Psort location CytoplasmicMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 383.0
BYD1_k127_1347159_2 PKD domain - - - 0.000000000000000000000000000004603 124.0
BYD1_k127_1476058_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 8.347e-201 629.0
BYD1_k127_1476058_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 529.0
BYD1_k127_1476058_10 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000006436 100.0
BYD1_k127_1476058_2 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 409.0
BYD1_k127_1476058_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 371.0
BYD1_k127_1476058_4 AhpC Tsa family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003855 289.0
BYD1_k127_1476058_5 shape-determining protein MreC K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000001259 236.0
BYD1_k127_1476058_6 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000000000000000000000000000000009201 201.0
BYD1_k127_1476058_7 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000000000000000000000001294 167.0
BYD1_k127_1476058_8 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000001811 138.0
BYD1_k127_1476058_9 rod shape-determining protein MreD - - - 0.000000000000000000000000000003072 125.0
BYD1_k127_1489353_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 1.958e-266 826.0
BYD1_k127_1489353_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.863e-223 701.0
BYD1_k127_1489353_10 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 383.0
BYD1_k127_1489353_11 PFAM MazG nucleotide pyrophosphohydrolase K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006907 368.0
BYD1_k127_1489353_12 Mediates zinc uptake. May also transport other divalent cations K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 369.0
BYD1_k127_1489353_13 Phosphorylase superfamily K03783 - 2.4.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 369.0
BYD1_k127_1489353_14 peptidylprolyl isomerase K03771 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 369.0
BYD1_k127_1489353_15 Molybdenum cofactor synthesis domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 361.0
BYD1_k127_1489353_16 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 331.0
BYD1_k127_1489353_17 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 297.0
BYD1_k127_1489353_18 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004684 296.0
BYD1_k127_1489353_19 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 287.0
BYD1_k127_1489353_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 518.0
BYD1_k127_1489353_20 PFAM Outer membrane protein transport protein (OMPP1 FadL TodX) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008964 293.0
BYD1_k127_1489353_21 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001459 309.0
BYD1_k127_1489353_22 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002835 279.0
BYD1_k127_1489353_23 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000711 282.0
BYD1_k127_1489353_24 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008578 268.0
BYD1_k127_1489353_25 exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000677 270.0
BYD1_k127_1489353_26 Metal dependent phosphohydrolases with conserved 'HD' motif. K06951 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003811 241.0
BYD1_k127_1489353_27 Molybdenum cofactor biosynthesis protein K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000001366 192.0
BYD1_k127_1489353_28 COG NOG23400 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000002298 189.0
BYD1_k127_1489353_29 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000006378 166.0
BYD1_k127_1489353_3 peptidyl-prolyl isomerase K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007046 485.0
BYD1_k127_1489353_30 Lipid A 3-O-deacylase (PagL) - - - 0.0000000000000000000000000000009714 135.0
BYD1_k127_1489353_31 Putative auto-transporter adhesin, head GIN domain - - - 0.000000000000000000000001106 113.0
BYD1_k127_1489353_32 Septum formation initiator - - - 0.00000000000000000009381 92.0
BYD1_k127_1489353_33 Belongs to the peptidase S8 family K12548,K13735,K21449 - - 0.00000000000000002856 98.0
BYD1_k127_1489353_34 AhpC Tsa family - - - 0.00000000000009133 83.0
BYD1_k127_1489353_36 Papain family cysteine protease - - - 0.00000000006125 77.0
BYD1_k127_1489353_37 mercury ion transmembrane transporter activity K07213 - - 0.0000001051 61.0
BYD1_k127_1489353_38 - - - - 0.0004452 53.0
BYD1_k127_1489353_4 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 464.0
BYD1_k127_1489353_5 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 454.0
BYD1_k127_1489353_6 Belongs to the GTP cyclohydrolase I type 2 NIF3 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 421.0
BYD1_k127_1489353_7 Probable molybdopterin binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 406.0
BYD1_k127_1489353_8 Galactokinase galactose-binding signature K00849 GO:0005975,GO:0005996,GO:0006012,GO:0008150,GO:0008152,GO:0019318,GO:0044238,GO:0044281,GO:0071704 2.7.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 406.0
BYD1_k127_1489353_9 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000601 398.0
BYD1_k127_1493018_0 cellulase activity - - - 2.379e-201 657.0
BYD1_k127_1493018_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005495 593.0
BYD1_k127_1493018_2 Aminotransferase class I and II K10206,K14261 - 2.6.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 479.0
BYD1_k127_1493018_3 Cytochrome C4 K04516 - 5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 445.0
BYD1_k127_1493018_4 Prephenate dehydrogenase K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 304.0
BYD1_k127_1493018_5 - - - - 0.0000000000000000000000000001178 134.0
BYD1_k127_1493018_6 PFAM Receptor L domain - - - 0.0000000000000000000000000002213 124.0
BYD1_k127_1574874_0 Belongs to the ompA family - - - 6.522e-201 652.0
BYD1_k127_1574874_1 Protease prsW family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002468 298.0
BYD1_k127_1574874_2 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000001064 225.0
BYD1_k127_1574874_3 Right handed beta helix region - - - 0.00001648 57.0
BYD1_k127_1768184_0 Tricorn protease homolog K08676 - - 0.0 1526.0
BYD1_k127_1768184_1 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.0 1133.0
BYD1_k127_1768184_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 5.748e-320 991.0
BYD1_k127_1768184_3 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 532.0
BYD1_k127_1768184_4 Domain of unknown function (DUF1731) K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002181 256.0
BYD1_k127_1768184_5 Two component regulator propeller - - - 0.0000004365 63.0
BYD1_k127_1768184_6 extracellular matrix structural constituent - - - 0.000006925 59.0
BYD1_k127_1831920_0 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000005546 191.0
BYD1_k127_1831920_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000227 180.0
BYD1_k127_1831920_2 - - - - 0.000000000000000000000000000000000006515 138.0
BYD1_k127_1831920_3 AbgT putative transporter family - - - 0.0000000000000004295 78.0
BYD1_k127_1831920_4 peptidase activity, acting on L-amino acid peptides - - - 0.000002446 59.0
BYD1_k127_1889015_0 Peptidase family M28 K05994 - 3.4.11.10 0.0000000000000000000000000000000000004729 154.0
BYD1_k127_1889015_1 Transcription factor zinc-finger K09981 - - 0.00000000000000000000000001626 110.0
BYD1_k127_1889015_2 - - - - 0.000000000000002193 82.0
BYD1_k127_1889015_3 RDD family - - - 0.0005102 43.0
BYD1_k127_1894553_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 584.0
BYD1_k127_1894553_1 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 365.0
BYD1_k127_1894553_2 Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate - - - 0.0000000000000000000000000000000000000000000000000000000000000002802 223.0
BYD1_k127_1894553_3 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000001976 216.0
BYD1_k127_1894553_4 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000000000000000000000000002839 216.0
BYD1_k127_1894553_5 S4 domain protein K04762 - - 0.0000000000000000000000000000000000004231 143.0
BYD1_k127_1894553_7 Domain of unknown function (DUF4143) K07133 - - 0.00002367 46.0
BYD1_k127_1894553_8 - - - - 0.00002976 46.0
BYD1_k127_1997973_0 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 477.0
BYD1_k127_1997973_1 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 461.0
BYD1_k127_1997973_2 ThiF family K03148,K21029 - 2.7.7.73,2.7.7.80 0.0000000000000000000000000000000000000000000000000008542 190.0
BYD1_k127_1997973_3 thiamine biosynthesis protein ThiS K03154 - - 0.00000000007037 64.0
BYD1_k127_1997973_4 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00006128 52.0
BYD1_k127_2105859_0 Peptidase, S9A B C family, catalytic domain protein K01278 - 3.4.14.5 1.667e-259 820.0
BYD1_k127_2105859_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.817e-221 691.0
BYD1_k127_2105859_10 - - - - 0.000009353 48.0
BYD1_k127_2105859_2 Belongs to the 'phage' integrase family K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007137 279.0
BYD1_k127_2105859_3 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000002441 207.0
BYD1_k127_2105859_4 Fibronectin type III domain - - - 0.000000000000000000000000000000000000000000000006852 187.0
BYD1_k127_2105859_5 ribosomal subunit interface protein K05808 - - 0.00000000000000000000000003902 110.0
BYD1_k127_2105859_6 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000003651 93.0
BYD1_k127_2105859_7 SecE/Sec61-gamma subunits of protein translocation complex K03073 - - 0.0000000000000003374 79.0
BYD1_k127_2136772_0 O-succinylbenzoic acid--CoA ligase K01911 - 6.2.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000629 264.0
BYD1_k127_2136772_1 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000002619 209.0
BYD1_k127_2169408_0 FlgD Ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 579.0
BYD1_k127_2169408_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 322.0
BYD1_k127_2169408_2 Transcriptional regulatory protein, C terminal K07658 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 311.0
BYD1_k127_2169408_3 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000000000000004382 202.0
BYD1_k127_2169408_4 - - - - 0.0000000000000000000000000000000002541 153.0
BYD1_k127_2169408_5 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000000000516 119.0
BYD1_k127_2169408_6 PKD domain protein - - - 0.00000000000000252 91.0
BYD1_k127_21898_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1251.0
BYD1_k127_21898_1 aconitate hydratase K01681 - 4.2.1.3 0.0 1167.0
BYD1_k127_21898_10 cyclic 2,3-diphosphoglycerate synthetase activity - - - 1.947e-237 739.0
BYD1_k127_21898_100 cellulose binding - - - 0.00000000000000000000000000000000000000000000000003548 207.0
BYD1_k127_21898_101 Quinol cytochrome c oxidoreductase membrane protein - - - 0.000000000000000000000000000000000000000000000005879 177.0
BYD1_k127_21898_102 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.000000000000000000000000000000000000000000000008346 178.0
BYD1_k127_21898_103 Mortierella verticillata NRRL 6337 K03282 - - 0.0000000000000000000000000000000000000000000000622 172.0
BYD1_k127_21898_104 Psort location CytoplasmicMembrane, score - - - 0.000000000000000000000000000000000000000000000227 180.0
BYD1_k127_21898_105 ATPase kinase involved in NAD metabolism - - - 0.0000000000000000000000000000000000000000000005356 171.0
BYD1_k127_21898_106 TPR repeat - - - 0.0000000000000000000000000000000000000000000005663 174.0
BYD1_k127_21898_107 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000008436 172.0
BYD1_k127_21898_108 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000000005627 161.0
BYD1_k127_21898_109 cellulase activity - - - 0.000000000000000000000000000000000000000715 166.0
BYD1_k127_21898_11 Psort location Cytoplasmic, score K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 2.693e-231 730.0
BYD1_k127_21898_110 PFAM Outer membrane lipoprotein carrier protein LolA K03634 - - 0.000000000000000000000000000000000000001387 154.0
BYD1_k127_21898_111 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000000000000000000000004021 163.0
BYD1_k127_21898_113 - - - - 0.0000000000000000000000000000000001054 141.0
BYD1_k127_21898_114 MORN repeat variant - - - 0.0000000000000000000000000000000007355 139.0
BYD1_k127_21898_115 YbbR-like protein - - - 0.000000000000000000000000000000006428 140.0
BYD1_k127_21898_116 Domain of unknown function (DUF4249) - - - 0.00000000000000000000000000000009997 135.0
BYD1_k127_21898_117 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.000000000000000000000000000003089 124.0
BYD1_k127_21898_118 - - - - 0.00000000000000000000000000005261 118.0
BYD1_k127_21898_119 - - - - 0.0000000000000000000000000001611 121.0
BYD1_k127_21898_12 Pfam Polysulphide reductase, NrfD K00185 - - 2.633e-226 707.0
BYD1_k127_21898_120 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000004691 119.0
BYD1_k127_21898_121 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000000002819 105.0
BYD1_k127_21898_122 Domain of unknown function (DUF4492) - - - 0.0000000000000000000000007366 105.0
BYD1_k127_21898_123 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000001104 106.0
BYD1_k127_21898_124 Plasmid pRiA4b ORF-3-like protein - - - 0.000000000000000000000002608 109.0
BYD1_k127_21898_125 - - - - 0.0000000000000000000003416 106.0
BYD1_k127_21898_126 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000000003616 97.0
BYD1_k127_21898_127 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000001833 108.0
BYD1_k127_21898_128 - - - - 0.0000000000000000002776 91.0
BYD1_k127_21898_129 YtxH-like protein - - - 0.0000000000000000007138 89.0
BYD1_k127_21898_13 Glycosyltransferase, group 2 family protein K07011 - - 1.085e-225 717.0
BYD1_k127_21898_130 Belongs to the UPF0337 (CsbD) family - - - 0.000000000000000003764 85.0
BYD1_k127_21898_131 Pkd domain containing protein - - - 0.000000000000000004879 99.0
BYD1_k127_21898_132 Gram-negative bacterial TonB protein C-terminal - - - 0.0000000000000001216 89.0
BYD1_k127_21898_133 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.0000000000000001567 81.0
BYD1_k127_21898_135 CarboxypepD_reg-like domain - - - 0.000000000000709 78.0
BYD1_k127_21898_136 Psort location CytoplasmicMembrane, score - - - 0.000000000002132 74.0
BYD1_k127_21898_137 - - - - 0.00000000000277 72.0
BYD1_k127_21898_139 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.00000000001954 67.0
BYD1_k127_21898_14 oxidase, subunit K00425 - 1.10.3.14 1.819e-212 672.0
BYD1_k127_21898_141 MerT mercuric transport protein - - - 0.0000000004044 64.0
BYD1_k127_21898_142 COG NOG38282 non supervised orthologous group - - - 0.0000002158 56.0
BYD1_k127_21898_144 - - - - 0.00007426 52.0
BYD1_k127_21898_15 Belongs to the peptidase S8 family - - - 9.46e-212 702.0
BYD1_k127_21898_16 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 6.963e-201 639.0
BYD1_k127_21898_17 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01840 - 5.4.2.8 8.372e-199 628.0
BYD1_k127_21898_18 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K07263 - - 1.043e-197 638.0
BYD1_k127_21898_19 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009222 607.0
BYD1_k127_21898_2 Quinol cytochrome c oxidoreductase K00184 - - 0.0 1043.0
BYD1_k127_21898_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009879 600.0
BYD1_k127_21898_21 Peptidase, M16 K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 584.0
BYD1_k127_21898_22 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850,K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006968 540.0
BYD1_k127_21898_23 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001773 516.0
BYD1_k127_21898_24 TrkA-C domain K11105 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 517.0
BYD1_k127_21898_25 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 527.0
BYD1_k127_21898_26 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004389 508.0
BYD1_k127_21898_27 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 491.0
BYD1_k127_21898_28 Iron-only hydrogenase maturation rSAM protein HydE K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 482.0
BYD1_k127_21898_29 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 482.0
BYD1_k127_21898_3 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.0 1032.0
BYD1_k127_21898_30 Maltogenic Amylase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 484.0
BYD1_k127_21898_31 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 475.0
BYD1_k127_21898_32 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 461.0
BYD1_k127_21898_33 COG NOG06393 non supervised orthologous group - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 475.0
BYD1_k127_21898_34 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 457.0
BYD1_k127_21898_35 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 450.0
BYD1_k127_21898_36 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009037 423.0
BYD1_k127_21898_37 cellulase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 443.0
BYD1_k127_21898_38 PFAM CobQ CobB MinD ParA nucleotide binding domain K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 413.0
BYD1_k127_21898_39 Domain of Unknown Function (DUF748) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004703 415.0
BYD1_k127_21898_4 PFAM TonB-dependent Receptor Plug - - - 1.01e-300 942.0
BYD1_k127_21898_40 GDSL family lipolytic protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 413.0
BYD1_k127_21898_41 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 405.0
BYD1_k127_21898_42 Evidence 5 No homology to any previously reported sequences K01361,K13277 - 3.4.21.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 438.0
BYD1_k127_21898_43 PFAM von Willebrand factor type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002669 394.0
BYD1_k127_21898_44 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 389.0
BYD1_k127_21898_45 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 383.0
BYD1_k127_21898_46 Short-chain dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 376.0
BYD1_k127_21898_47 DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 354.0
BYD1_k127_21898_48 PFAM von Willebrand factor type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 347.0
BYD1_k127_21898_49 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 344.0
BYD1_k127_21898_5 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02622 - - 5.067e-293 910.0
BYD1_k127_21898_50 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 324.0
BYD1_k127_21898_51 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002624 335.0
BYD1_k127_21898_52 Quinol cytochrome c oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 331.0
BYD1_k127_21898_53 Uracil DNA glycosylase superfamily K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 317.0
BYD1_k127_21898_54 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01665,K03342,K13503,K13950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85,4.1.3.27,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 318.0
BYD1_k127_21898_55 Domain of unknown function (DUF4159) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 310.0
BYD1_k127_21898_56 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 322.0
BYD1_k127_21898_57 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007032 304.0
BYD1_k127_21898_58 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 300.0
BYD1_k127_21898_59 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 296.0
BYD1_k127_21898_6 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 2.752e-283 892.0
BYD1_k127_21898_60 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006668 295.0
BYD1_k127_21898_61 penicillin-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 291.0
BYD1_k127_21898_62 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002845 278.0
BYD1_k127_21898_63 NusB family K03625 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003289 280.0
BYD1_k127_21898_64 Domain of unknown function (DUF4918) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008125 275.0
BYD1_k127_21898_65 Psort location Cytoplasmic, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000645 288.0
BYD1_k127_21898_66 cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009452 271.0
BYD1_k127_21898_67 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001853 266.0
BYD1_k127_21898_68 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000004016 263.0
BYD1_k127_21898_69 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003544 264.0
BYD1_k127_21898_7 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 1.336e-259 824.0
BYD1_k127_21898_70 Shikimate K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000002016 252.0
BYD1_k127_21898_71 Protein of unknown function (DUF3078) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002146 254.0
BYD1_k127_21898_72 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000897 251.0
BYD1_k127_21898_73 photoreceptor activity K02007,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000001587 261.0
BYD1_k127_21898_74 Belongs to the UPF0246 family K09861 - - 0.00000000000000000000000000000000000000000000000000000000000000000188 234.0
BYD1_k127_21898_75 Putative DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002059 233.0
BYD1_k127_21898_76 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000004723 231.0
BYD1_k127_21898_77 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000001066 226.0
BYD1_k127_21898_78 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000007153 220.0
BYD1_k127_21898_79 methylglyoxal synthase K01734 - 4.2.3.3 0.0000000000000000000000000000000000000000000000000000000000007845 213.0
BYD1_k127_21898_8 Peptidase, S9A B C family, catalytic domain protein - GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009987,GO:0016787,GO:0019538,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0046983,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 4.943e-254 801.0
BYD1_k127_21898_80 Belongs to the peptidase S8 family - - - 0.000000000000000000000000000000000000000000000000000000000003824 239.0
BYD1_k127_21898_81 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.00000000000000000000000000000000000000000000000000000000001949 216.0
BYD1_k127_21898_82 Phosphoesterase K07095 - - 0.00000000000000000000000000000000000000000000000000000000003265 210.0
BYD1_k127_21898_83 - - - - 0.0000000000000000000000000000000000000000000000000000000002809 207.0
BYD1_k127_21898_84 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000005583 210.0
BYD1_k127_21898_85 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000009224 209.0
BYD1_k127_21898_86 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase K03772,K03773 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000005204 207.0
BYD1_k127_21898_87 S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000003463 203.0
BYD1_k127_21898_88 Regulator - - - 0.00000000000000000000000000000000000000000000000000000003729 199.0
BYD1_k127_21898_89 Domain of unknown function (DUF892) - - - 0.0000000000000000000000000000000000000000000000000000001483 199.0
BYD1_k127_21898_9 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 1.328e-246 770.0
BYD1_k127_21898_90 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000002461 199.0
BYD1_k127_21898_91 tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000003511 196.0
BYD1_k127_21898_92 Anthranilate synthase component II K01664 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85 0.00000000000000000000000000000000000000000000000000004265 193.0
BYD1_k127_21898_93 Peptidase, M23 family - - - 0.0000000000000000000000000000000000000000000000000004363 196.0
BYD1_k127_21898_94 Amino-transferase class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000004663 190.0
BYD1_k127_21898_95 nicotinamide mononucleotide transporter K03811 - - 0.0000000000000000000000000000000000000000000000000004946 190.0
BYD1_k127_21898_96 Cytochrome C - - - 0.000000000000000000000000000000000000000000000000001246 188.0
BYD1_k127_21898_97 Psort location Cytoplasmic, score K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000006022 188.0
BYD1_k127_21898_98 Aspartate carbamoyltransferase regulatory chain, metal binding domain K00610 - - 0.00000000000000000000000000000000000000000000000001234 184.0
BYD1_k127_21898_99 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000000000001409 184.0
BYD1_k127_2312325_0 phosphorelay signal transduction system K07714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 446.0
BYD1_k127_2312325_1 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006792 406.0
BYD1_k127_2312325_2 PFAM transferase hexapeptide repeat containing protein K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 360.0
BYD1_k127_2336125_0 signal peptide peptidase SppA, 67K type K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 586.0
BYD1_k127_2336125_1 Pfam 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000001065 233.0
BYD1_k127_2336125_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000003739 219.0
BYD1_k127_2336125_3 TIGRFAM 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000004871 168.0
BYD1_k127_2377706_0 protein conserved in bacteria (DUF2329) - - - 1.294e-230 737.0
BYD1_k127_2377706_1 Major Facilitator Superfamily K02429 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 581.0
BYD1_k127_2377706_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 553.0
BYD1_k127_2377706_3 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 554.0
BYD1_k127_2377706_4 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 466.0
BYD1_k127_2377706_5 dicarboxylic acid transport K03309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 335.0
BYD1_k127_2377706_6 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000001115 187.0
BYD1_k127_2457637_0 translation initiation factor activity K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 513.0
BYD1_k127_2457637_1 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 460.0
BYD1_k127_2457637_10 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000002344 226.0
BYD1_k127_2457637_11 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000000003109 150.0
BYD1_k127_2457637_12 - - - - 0.0000000000000000000000000001205 122.0
BYD1_k127_2457637_13 Sel1-like repeats. - - - 0.00000000000000000000000553 118.0
BYD1_k127_2457637_14 - - - - 0.000000000000000000007476 100.0
BYD1_k127_2457637_15 Nuclease, EndA NucM family - - - 0.00000000000000003322 97.0
BYD1_k127_2457637_17 Pfam Kelch - - - 0.000000000000001068 89.0
BYD1_k127_2457637_18 S-layer homology domain - - - 0.00001378 57.0
BYD1_k127_2457637_2 HI0933-like protein K07007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 351.0
BYD1_k127_2457637_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 304.0
BYD1_k127_2457637_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008263 279.0
BYD1_k127_2457637_5 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006376 254.0
BYD1_k127_2457637_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001387 249.0
BYD1_k127_2457637_7 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005752 248.0
BYD1_k127_2457637_8 Acetyltransferase (GNAT) domain K18815 - 2.3.1.82 0.00000000000000000000000000000000000000000000000000000000000000000000001278 244.0
BYD1_k127_2457637_9 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000006777 218.0
BYD1_k127_264848_0 glucan 1,4-alpha-glucosidase activity K01178 - 3.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 336.0
BYD1_k127_264848_1 peptidase activity K20333 - - 0.000000000000000000000000000000004799 136.0
BYD1_k127_264848_2 cysteine-type peptidase activity - - - 0.0002558 53.0
BYD1_k127_2665462_0 usher protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 362.0
BYD1_k127_2665462_1 protein related to plant photosystem II stability assembly factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 338.0
BYD1_k127_2665462_2 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001304 293.0
BYD1_k127_2665462_3 Fibronectin type III domain - - - 0.0000000000000000000000000000000000000000002097 184.0
BYD1_k127_2703111_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 9.227e-300 940.0
BYD1_k127_2703111_1 acetyl-CoA hydrolase K01067,K18118 - 2.8.3.18,3.1.2.1 2.864e-216 681.0
BYD1_k127_2703111_10 conserved protein (DUF2183) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003627 265.0
BYD1_k127_2703111_11 peptidase activity, acting on L-amino acid peptides K07752 - 3.4.17.22 0.00000000000000000000000000000000000000000000000000000000000000000002003 262.0
BYD1_k127_2703111_12 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000000000000000000000000000000000002835 237.0
BYD1_k127_2703111_13 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000279 217.0
BYD1_k127_2703111_14 PFAM ATP-binding region, ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000001012 215.0
BYD1_k127_2703111_15 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000009917 199.0
BYD1_k127_2703111_16 - - - - 0.0000000000000000000000000000000000000000000001369 176.0
BYD1_k127_2703111_17 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000003395 160.0
BYD1_k127_2703111_18 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000000000001556 171.0
BYD1_k127_2703111_19 Belongs to the Fur family K09825 - - 0.000000000000000000000007084 107.0
BYD1_k127_2703111_2 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 541.0
BYD1_k127_2703111_20 Peptidase M50B-like - - - 0.00000000000000000000001704 109.0
BYD1_k127_2703111_21 Domain of unknown function (DUF5063) - - - 0.00000000000000000000006264 104.0
BYD1_k127_2703111_22 Tetratricopeptide repeat K06665 GO:0000122,GO:0000228,GO:0000785,GO:0000790,GO:0000988,GO:0000989,GO:0001076,GO:0001190,GO:0001191,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016584,GO:0017053,GO:0018130,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0032774,GO:0032879,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0040029,GO:0042304,GO:0042826,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0060255,GO:0062012,GO:0065007,GO:0070013,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0072364,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090304,GO:0090568,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141 - 0.0000000000005059 80.0
BYD1_k127_2703111_23 Histidine kinase K07678 - 2.7.13.3 0.000003312 54.0
BYD1_k127_2703111_3 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 460.0
BYD1_k127_2703111_4 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 413.0
BYD1_k127_2703111_5 quinone oxidoreductase K00001,K19745 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 372.0
BYD1_k127_2703111_6 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 355.0
BYD1_k127_2703111_7 FES K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004727 329.0
BYD1_k127_2703111_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008996 304.0
BYD1_k127_2703111_9 COGs COG0385 Na -dependent transporter K14347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007417 271.0
BYD1_k127_273555_0 Glutamine amidotransferase domain K00764 - 2.4.2.14 3.594e-211 666.0
BYD1_k127_273555_1 Purple acid Phosphatase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 588.0
BYD1_k127_273555_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 541.0
BYD1_k127_273555_3 Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002288 526.0
BYD1_k127_273555_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004157 280.0
BYD1_k127_273555_5 Fibronectin type 3 domain K21571 - - 0.0000000000000000000000000000000000000000000005297 175.0
BYD1_k127_273555_6 Parallel beta-helix repeats - - - 0.0000000000000000000000002575 121.0
BYD1_k127_273555_7 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000005286 113.0
BYD1_k127_273555_8 Subtilase family - - - 0.00004294 54.0
BYD1_k127_2761825_0 GatB/GatE catalytic domain - - - 2.362e-279 872.0
BYD1_k127_2761825_1 Asparaginase K01424 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.5.1.1 5.378e-255 790.0
BYD1_k127_2761825_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 578.0
BYD1_k127_2761825_3 PFAM Peptidase family M20 M25 M40 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 357.0
BYD1_k127_2761825_4 Endonuclease Exonuclease Phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004982 288.0
BYD1_k127_2761825_5 Uroporphyrinogen-III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007918 279.0
BYD1_k127_2761825_6 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000000009006 125.0
BYD1_k127_2761825_7 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000000007167 85.0
BYD1_k127_2761825_8 Psort location CytoplasmicMembrane, score - - - 0.0000000000005984 79.0
BYD1_k127_290587_0 PFAM Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 383.0
BYD1_k127_290587_1 metallocarboxypeptidase activity K06987,K07752 - 3.4.17.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 374.0
BYD1_k127_290587_2 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 327.0
BYD1_k127_290587_3 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000009292 208.0
BYD1_k127_290587_4 - - - - 0.000000000000002285 83.0
BYD1_k127_2951824_0 PepSY domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 406.0
BYD1_k127_2951824_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0006091,GO:0006807,GO:0008150,GO:0008152,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0016661,GO:0016662,GO:0016966,GO:0019645,GO:0020037,GO:0022900,GO:0022904,GO:0030288,GO:0030313,GO:0031975,GO:0042279,GO:0042597,GO:0044237,GO:0044464,GO:0045333,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0098809,GO:1901363 1.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 314.0
BYD1_k127_2951824_2 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003115 299.0
BYD1_k127_2951824_3 PFAM NapC NirT cytochrome c family, N-terminal region K15876 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004251 254.0
BYD1_k127_2951824_4 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000003922 220.0
BYD1_k127_2951824_5 Cupin domain - - - 0.0000000000000000000000000000000003096 134.0
BYD1_k127_2951824_6 Cupin domain - - - 0.00002197 50.0
BYD1_k127_2993230_0 Hep Hag repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001491 253.0
BYD1_k127_2993230_1 - - - - 0.00000000000000000000000004876 117.0
BYD1_k127_2993230_2 MTH538 TIR-like domain (DUF1863) - - - 0.0000000000000000000000044 106.0
BYD1_k127_3023658_0 chaperone-mediated protein folding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009995 542.0
BYD1_k127_3023658_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 313.0
BYD1_k127_3023658_2 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 315.0
BYD1_k127_3023658_3 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 293.0
BYD1_k127_3023658_4 - - - - 0.00000000000000000000000000000000000000000000000000000003916 203.0
BYD1_k127_3023658_5 - K11068 - - 0.0000000000000000000000000000000000000000000000001388 184.0
BYD1_k127_3023658_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000002712 119.0
BYD1_k127_3023658_7 Site-specific recombinase, DNA invertase Pin - - - 0.00002798 48.0
BYD1_k127_3030640_0 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 337.0
BYD1_k127_3030640_2 Fibronectin type 3 domain - - - 0.0000000002686 73.0
BYD1_k127_3030640_3 - - - - 0.0002263 45.0
BYD1_k127_3134422_0 single-stranded-DNA-specific exonuclease RecJ K07462 - - 4.505e-206 659.0
BYD1_k127_3134422_1 GH3 auxin-responsive promoter - - - 3.022e-205 652.0
BYD1_k127_3134422_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 336.0
BYD1_k127_3134422_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 336.0
BYD1_k127_3134422_4 - - - - 0.00000000000000000000000000000000000000000001099 171.0
BYD1_k127_3134422_5 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000007888 138.0
BYD1_k127_3134422_6 PKD domain containing protein - - - 0.0000000002107 69.0
BYD1_k127_3177372_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 5.127e-259 812.0
BYD1_k127_3177372_1 PFAM aromatic amino acid beta-eliminating lyase threonine aldolase K01667 - 4.1.99.1 3.926e-235 733.0
BYD1_k127_3177372_10 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 334.0
BYD1_k127_3177372_11 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 338.0
BYD1_k127_3177372_12 Domain of unknown function (DUF5005) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 329.0
BYD1_k127_3177372_13 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 289.0
BYD1_k127_3177372_14 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008876 290.0
BYD1_k127_3177372_15 COGs COG0859 ADP-heptose LPS heptosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001972 281.0
BYD1_k127_3177372_16 diacylglycerol kinase, catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003105 275.0
BYD1_k127_3177372_17 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004209 265.0
BYD1_k127_3177372_18 AsmA-like C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005746 281.0
BYD1_k127_3177372_19 TIGRFAM phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000001922 229.0
BYD1_k127_3177372_2 Cation transport protein K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 524.0
BYD1_k127_3177372_20 - - - - 0.000000000000000000000000000002356 132.0
BYD1_k127_3177372_21 PFAM YceI-like domain - - - 0.0000000000000000000000000002749 123.0
BYD1_k127_3177372_23 Pfam YceI-like domain - - - 0.0000000000000000003192 95.0
BYD1_k127_3177372_24 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0002413 52.0
BYD1_k127_3177372_3 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 482.0
BYD1_k127_3177372_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008568 454.0
BYD1_k127_3177372_5 domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005922 443.0
BYD1_k127_3177372_6 MATE efflux family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 420.0
BYD1_k127_3177372_7 HemN C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 394.0
BYD1_k127_3177372_8 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 379.0
BYD1_k127_3177372_9 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 368.0
BYD1_k127_3194786_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 508.0
BYD1_k127_3194786_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 520.0
BYD1_k127_3194786_2 oligopeptide transport K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 423.0
BYD1_k127_3319736_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.278e-201 632.0
BYD1_k127_3319736_1 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006452 513.0
BYD1_k127_3319736_2 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000164 227.0
BYD1_k127_3319736_3 Zn_pept - - - 0.00000000000000000000000000000000000000000000000004204 189.0
BYD1_k127_3319736_4 Phosphopantetheine attachment site K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000000000000006349 140.0
BYD1_k127_3319736_5 - - - - 0.0000000000005915 75.0
BYD1_k127_3368344_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.0 1055.0
BYD1_k127_3368344_1 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 - 3.4.21.83 1.543e-236 751.0
BYD1_k127_3368344_10 Psort location Extracellular, score 9.64 - - - 0.0000000000000000000000000001564 136.0
BYD1_k127_3368344_11 translation initiation factor activity K03239,K03680 - - 0.000000000000005916 85.0
BYD1_k127_3368344_12 metallopeptidase activity - - - 0.00001181 61.0
BYD1_k127_3368344_2 Fructose tagatose bisphosphate aldolase K01624 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016830,GO:0016832,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0019899,GO:0030312,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035375,GO:0042866,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046914,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 572.0
BYD1_k127_3368344_3 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 574.0
BYD1_k127_3368344_4 C-terminal domain of CHU protein family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009455 438.0
BYD1_k127_3368344_5 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 342.0
BYD1_k127_3368344_6 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004632 302.0
BYD1_k127_3368344_7 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 286.0
BYD1_k127_3368344_8 Protein of unknown function (DUF3109) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004346 242.0
BYD1_k127_3368344_9 Iron-storage protein K02217 - 1.16.3.2 0.00000000000000000000000000000000000000000000000000000002465 201.0
BYD1_k127_3403007_0 BadF BadG BcrA BcrD - - - 7.926e-320 1017.0
BYD1_k127_3403007_1 serine-type exopeptidase activity K01322 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.21.26 2.727e-277 869.0
BYD1_k127_3403007_10 PFAM Polyketide cyclase dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000005322 236.0
BYD1_k127_3403007_11 Uncharacterized conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000000000000000000000000001282 205.0
BYD1_k127_3403007_12 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000003458 189.0
BYD1_k127_3403007_13 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000004187 202.0
BYD1_k127_3403007_14 Putative porin - - - 0.00000000000000000000000000000000000000000000000004663 200.0
BYD1_k127_3403007_15 Universal stress protein family - - - 0.000000000000000000000000000000000000000000006392 167.0
BYD1_k127_3403007_16 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000001657 149.0
BYD1_k127_3403007_17 - - - - 0.00000000000000000000000000001835 126.0
BYD1_k127_3403007_18 Flavodoxin domain - - - 0.000000000000000000000000001027 117.0
BYD1_k127_3403007_19 - - - - 0.0000000000000000000001597 102.0
BYD1_k127_3403007_2 Peptidase S46 - - - 8.97e-251 792.0
BYD1_k127_3403007_20 - - - - 0.0000000000000000000676 93.0
BYD1_k127_3403007_22 Zn peptidase - - - 0.00000000000000001837 92.0
BYD1_k127_3403007_23 PFAM DNA alkylation repair enzyme - - - 0.0000000000000005452 87.0
BYD1_k127_3403007_24 - - - - 0.0001812 47.0
BYD1_k127_3403007_26 RHS Repeat - - - 0.0008114 50.0
BYD1_k127_3403007_3 Protein of unknown function, DUF255 K06888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005992 619.0
BYD1_k127_3403007_4 Outer membrane lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 610.0
BYD1_k127_3403007_5 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 542.0
BYD1_k127_3403007_6 TonB-dependent receptor plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004962 410.0
BYD1_k127_3403007_7 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008035 321.0
BYD1_k127_3403007_8 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 304.0
BYD1_k127_3403007_9 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001164 267.0
BYD1_k127_3425077_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134,K00150,K03340 - 1.2.1.12,1.2.1.59,1.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 491.0
BYD1_k127_3425077_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006,K01007 - 2.7.9.1,2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 470.0
BYD1_k127_3425077_2 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 407.0
BYD1_k127_3425077_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 377.0
BYD1_k127_3425077_4 Domain of unknown function (DUF5020) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009807 313.0
BYD1_k127_3425077_5 - - - - 0.00000000000000000000000000000007278 130.0
BYD1_k127_3425077_6 domain protein - - - 0.000000000000000000000000006232 121.0
BYD1_k127_3425077_7 Cyclic nucleotide-monophosphate binding domain - - - 0.00001506 47.0
BYD1_k127_3425077_8 - - - - 0.00004567 47.0
BYD1_k127_3441112_0 Peptidase S46 - - - 3.493e-268 844.0
BYD1_k127_3441112_1 Domain of unknown function (DUF3362) - - - 1.152e-258 810.0
BYD1_k127_3441112_10 Efflux ABC transporter, permease protein K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 456.0
BYD1_k127_3441112_11 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000246 434.0
BYD1_k127_3441112_12 ATPase domain of DNA mismatch repair MUTS family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009485 420.0
BYD1_k127_3441112_13 mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 406.0
BYD1_k127_3441112_14 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007611 353.0
BYD1_k127_3441112_15 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 342.0
BYD1_k127_3441112_16 alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001724 339.0
BYD1_k127_3441112_17 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008005 309.0
BYD1_k127_3441112_18 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 294.0
BYD1_k127_3441112_19 Cytidine and deoxycytidylate deaminase zinc-binding region K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004617 278.0
BYD1_k127_3441112_2 Peptidase S46 - - - 2.247e-231 737.0
BYD1_k127_3441112_20 PFAM methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003367 271.0
BYD1_k127_3441112_21 phosphohydrolase K06950 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002551 266.0
BYD1_k127_3441112_22 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003151 248.0
BYD1_k127_3441112_23 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.000000000000000000000000000000000000000000000000000000000000000006699 237.0
BYD1_k127_3441112_24 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000007815 221.0
BYD1_k127_3441112_25 Thiol disulfide interchange protein - - - 0.0000000000000000000000000000000000000000000000000000001344 199.0
BYD1_k127_3441112_26 CYTH K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000001074 181.0
BYD1_k127_3441112_27 Regulator - - - 0.00000000000000000000000000000000000000000001698 166.0
BYD1_k127_3441112_28 PFAM SprT-like family - - - 0.00000000000000000000000000000000000000000004074 169.0
BYD1_k127_3441112_29 Outer membrane protein Omp28 - - - 0.0000000000000000000000000000000000000000002204 169.0
BYD1_k127_3441112_3 PFAM amino acid permease-associated region K03294 - - 7.24e-225 710.0
BYD1_k127_3441112_30 - - - - 0.0000000000000000000000000000000000000000005197 174.0
BYD1_k127_3441112_31 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000008989 154.0
BYD1_k127_3441112_32 cellulose binding - - - 0.0000000000000000000000000000000003691 146.0
BYD1_k127_3441112_33 - - - - 0.0000000000000000000000000000000521 129.0
BYD1_k127_3441112_34 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000001607 129.0
BYD1_k127_3441112_35 Domain of unknown function (DUF305) - - - 0.00000000000000000000009245 108.0
BYD1_k127_3441112_36 Psort location CytoplasmicMembrane, score K03558 - - 0.0000000000000008453 84.0
BYD1_k127_3441112_37 Spore Coat Protein K06330 - - 0.0000000000004237 81.0
BYD1_k127_3441112_4 Peptidase family M49 - - - 6.777e-222 701.0
BYD1_k127_3441112_5 Conserved carboxylase domain K01571,K01960 - 4.1.1.3,6.4.1.1 1.999e-219 695.0
BYD1_k127_3441112_6 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 512.0
BYD1_k127_3441112_7 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 488.0
BYD1_k127_3441112_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 479.0
BYD1_k127_3441112_9 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001624 457.0
BYD1_k127_3442428_0 Psort location OuterMembrane, score - - - 0.0 1251.0
BYD1_k127_3442428_1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 0.0 1171.0
BYD1_k127_3442428_10 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001919 448.0
BYD1_k127_3442428_11 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006281 417.0
BYD1_k127_3442428_12 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 385.0
BYD1_k127_3442428_13 serine-type peptidase activity K06889,K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004585 367.0
BYD1_k127_3442428_14 Phosphorylase superfamily K00757 - 2.4.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 310.0
BYD1_k127_3442428_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 311.0
BYD1_k127_3442428_16 PFAM Glycosyl hydrolases family 25 K07273 - - 0.00000000000000000000000000000000000000000000000000000000000000000000172 244.0
BYD1_k127_3442428_17 PFAM NlpC P60 family - - - 0.00000000000000000000000000000000000000000000000000000000000001156 224.0
BYD1_k127_3442428_18 - - - - 0.00000000000000000000000000000000000000000000000000000000002294 210.0
BYD1_k127_3442428_19 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000481 226.0
BYD1_k127_3442428_2 Pyruvate phosphate dikinase, PEP/pyruvate binding domain - - - 3.853e-315 1009.0
BYD1_k127_3442428_20 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000006235 203.0
BYD1_k127_3442428_21 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000002296 190.0
BYD1_k127_3442428_22 TIGRFAM formate dehydrogenase, alpha subunit K00336,K05299 - 1.17.1.10,1.6.5.3 0.0000000000000000000000000000000000000000000000007634 194.0
BYD1_k127_3442428_23 Thioredoxin - - - 0.000000000000000000000000000000000000000000000006793 178.0
BYD1_k127_3442428_24 PFAM PAP2 superfamily K19302 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009605,GO:0009607,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0042578,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0046467,GO:0046493,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0071704,GO:0075136,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 3.6.1.27 0.000000000000000000000000000000000000000000001567 173.0
BYD1_k127_3442428_25 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000322 173.0
BYD1_k127_3442428_26 PDZ DHR GLGF domain protein - - - 0.00000000000000000000000000000000000000000006511 176.0
BYD1_k127_3442428_27 SMART PAS domain containing protein K03406 - - 0.0000000000000000000000000000000000000000006377 183.0
BYD1_k127_3442428_28 WbqC-like protein family - - - 0.000000000000000000000000000000000000000005022 162.0
BYD1_k127_3442428_29 SnoaL-like domain - - - 0.0000000000000000000000000000000000000002485 153.0
BYD1_k127_3442428_3 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 2.431e-227 710.0
BYD1_k127_3442428_30 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.000000000000000000000000000000000001698 143.0
BYD1_k127_3442428_31 SPTR Transposase - - - 0.00000000000000000000000000000000006815 138.0
BYD1_k127_3442428_32 - - - - 0.00000008204 61.0
BYD1_k127_3442428_4 Belongs to the glycosyl hydrolase 13 family K21575 GO:0003674,GO:0003824,GO:0004553,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016787,GO:0016798,GO:0031216,GO:0044464,GO:0071944 3.2.1.135 4.284e-205 655.0
BYD1_k127_3442428_5 hydrolase activity, hydrolyzing O-glycosyl compounds K01176,K05343 GO:0000023,GO:0000271,GO:0003674,GO:0003824,GO:0004553,GO:0004556,GO:0005488,GO:0005509,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0005984,GO:0005991,GO:0005992,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009250,GO:0009311,GO:0009312,GO:0009987,GO:0015980,GO:0016020,GO:0016051,GO:0016160,GO:0016161,GO:0016787,GO:0016798,GO:0016853,GO:0016866,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046872,GO:0047471,GO:0055114,GO:0071704,GO:0071944,GO:1901576 3.2.1.1,5.4.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009633 582.0
BYD1_k127_3442428_6 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 572.0
BYD1_k127_3442428_7 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 481.0
BYD1_k127_3442428_8 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 465.0
BYD1_k127_3442428_9 CinA-like protein K03742,K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 462.0
BYD1_k127_3462568_0 PFAM Peptidase M16 inactive domain K07263 - - 0.0 1041.0
BYD1_k127_3462568_1 Oligoendopeptidase f - - - 4.277e-289 903.0
BYD1_k127_3462568_10 Sigma-54 factor, Activator interacting domain (AID) K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 560.0
BYD1_k127_3462568_11 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 555.0
BYD1_k127_3462568_12 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 544.0
BYD1_k127_3462568_13 helicase superfamily c-terminal domain K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 541.0
BYD1_k127_3462568_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008581 533.0
BYD1_k127_3462568_15 Amidinotransferase K01478 - 3.5.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 492.0
BYD1_k127_3462568_16 PFAM Aminotransferase, class I K14287 - 2.6.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 482.0
BYD1_k127_3462568_17 Two component regulator propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 494.0
BYD1_k127_3462568_18 Surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 455.0
BYD1_k127_3462568_19 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 448.0
BYD1_k127_3462568_2 Peptidase family M3 K01284 - 3.4.15.5 4.339e-289 902.0
BYD1_k127_3462568_20 PFAM Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 436.0
BYD1_k127_3462568_21 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 441.0
BYD1_k127_3462568_22 agmatine deiminase activity K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 434.0
BYD1_k127_3462568_23 Dahp synthetase i kdsa K04516 - 5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 400.0
BYD1_k127_3462568_24 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 360.0
BYD1_k127_3462568_25 cysteine-type endopeptidase activity K08589 GO:0003674,GO:0003824,GO:0004175,GO:0004197,GO:0004198,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008234,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.22.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 370.0
BYD1_k127_3462568_26 Serine protease, subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 348.0
BYD1_k127_3462568_27 LD-carboxypeptidase K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 335.0
BYD1_k127_3462568_28 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 323.0
BYD1_k127_3462568_29 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 293.0
BYD1_k127_3462568_3 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 7.982e-275 856.0
BYD1_k127_3462568_30 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 292.0
BYD1_k127_3462568_31 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 294.0
BYD1_k127_3462568_32 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K13566 - 3.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001403 279.0
BYD1_k127_3462568_33 Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001859 252.0
BYD1_k127_3462568_34 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002463 267.0
BYD1_k127_3462568_35 Putative prokaryotic signal transducing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003704 254.0
BYD1_k127_3462568_36 Cytidylyltransferase family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000002974 237.0
BYD1_k127_3462568_37 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000002585 229.0
BYD1_k127_3462568_38 dolichyl monophosphate biosynthetic process K00981,K18678 - 2.7.1.182,2.7.7.41 0.0000000000000000000000000000000000000000000000000000000003509 209.0
BYD1_k127_3462568_39 peptidyl-tyrosine sulfation - - - 0.000000000000000000000000000000000000000000000000000000001732 207.0
BYD1_k127_3462568_4 tRNA synthetases class II (D, K and N) K01893 - 6.1.1.22 1.632e-247 769.0
BYD1_k127_3462568_40 EcsC protein family - - - 0.00000000000000000000000000000000000000000000000003979 184.0
BYD1_k127_3462568_41 sulfotransferase activity K01014,K01016,K01025 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006805,GO:0006950,GO:0006952,GO:0008146,GO:0008150,GO:0008152,GO:0009410,GO:0009605,GO:0009607,GO:0009617,GO:0009987,GO:0016740,GO:0016782,GO:0042221,GO:0042742,GO:0043207,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051704,GO:0051707,GO:0051716,GO:0051923,GO:0070887,GO:0071466,GO:0098542 2.8.2.1,2.8.2.4 0.00000000000000000000000000000000000000000000003747 176.0
BYD1_k127_3462568_42 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0032259,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000001893 177.0
BYD1_k127_3462568_43 AMP binding - - - 0.00000000000000000000000000000000000000001452 164.0
BYD1_k127_3462568_44 - - - - 0.00000000000000000000000000000000000000005941 160.0
BYD1_k127_3462568_45 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000004977 151.0
BYD1_k127_3462568_46 Cytidylate kinase-like family - - - 0.0000000000000000000000000000000000002183 149.0
BYD1_k127_3462568_47 Sigma-70 region 2 - - - 0.0000000000000000000000000000000000008356 145.0
BYD1_k127_3462568_48 Universal stress protein family - - - 0.000000000000000000000000000000000001048 150.0
BYD1_k127_3462568_49 Belongs to the UPF0102 family K07460 - - 0.00000000000000000000000000000001903 131.0
BYD1_k127_3462568_5 Sulfate permease K03321 - - 6.909e-196 626.0
BYD1_k127_3462568_50 - - - - 0.000000000000000000001548 100.0
BYD1_k127_3462568_51 - - - - 0.00000000000000000005599 104.0
BYD1_k127_3462568_52 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000005435 86.0
BYD1_k127_3462568_53 PFAM Sporulation related domain - - - 0.000000000000001005 82.0
BYD1_k127_3462568_54 Coenzyme PQQ synthesis protein D (PqqD) - - - 0.000000000000008905 76.0
BYD1_k127_3462568_6 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 7.991e-195 617.0
BYD1_k127_3462568_7 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 633.0
BYD1_k127_3462568_8 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 592.0
BYD1_k127_3462568_9 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004518 560.0
BYD1_k127_3529286_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1367.0
BYD1_k127_3529286_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5.011e-299 931.0
BYD1_k127_3529286_10 Isopentenyl-diphosphate delta-isomerase K01823 - 5.3.3.2 0.000000000000000000000000000000000000000000000000000000000000000007679 228.0
BYD1_k127_3529286_11 hydroxylase K15746 - 1.14.15.24 0.000000000000000000000000000000000000007826 152.0
BYD1_k127_3529286_12 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000005425 129.0
BYD1_k127_3529286_13 - - - - 0.00000000000000000009649 95.0
BYD1_k127_3529286_14 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.000001943 49.0
BYD1_k127_3529286_2 Alcohol dehydrogenase GroES-like domain K00008 - 1.1.1.14 5.87e-217 677.0
BYD1_k127_3529286_3 COG1233 Phytoene dehydrogenase and related K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 3.484e-201 637.0
BYD1_k127_3529286_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 466.0
BYD1_k127_3529286_5 PFAM Squalene phytoene synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 369.0
BYD1_k127_3529286_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 325.0
BYD1_k127_3529286_7 Psort location OuterMembrane, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 297.0
BYD1_k127_3529286_8 lycopene cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001731 255.0
BYD1_k127_3529286_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000006617 236.0
BYD1_k127_3693270_0 2Fe-2S iron-sulfur cluster binding domain - - - 0.0 1046.0
BYD1_k127_3693270_1 Starch synthase, catalytic domain K00703 - 2.4.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 368.0
BYD1_k127_3693270_2 Domain of unknown function (DUF4270) - - - 0.0000000000000000000000002304 118.0
BYD1_k127_3813062_0 Carboxyl transferase domain - - - 1.123e-264 822.0
BYD1_k127_3813062_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 3.124e-209 677.0
BYD1_k127_3813062_10 s cog5361 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002931 494.0
BYD1_k127_3813062_11 homocysteine catabolic process K01372,K02316 - 3.4.22.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003159 468.0
BYD1_k127_3813062_12 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 445.0
BYD1_k127_3813062_13 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 422.0
BYD1_k127_3813062_14 PFAM Inner membrane protein CreD K06143 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 424.0
BYD1_k127_3813062_15 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002359 387.0
BYD1_k127_3813062_16 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 384.0
BYD1_k127_3813062_17 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 365.0
BYD1_k127_3813062_18 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 361.0
BYD1_k127_3813062_19 Pfam:DUF4353 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006332 356.0
BYD1_k127_3813062_2 Cell division protein FtsI penicillin-binding protein 2 K03587 - 3.4.16.4 6.653e-208 667.0
BYD1_k127_3813062_20 Elongation factor TS K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 329.0
BYD1_k127_3813062_21 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 314.0
BYD1_k127_3813062_22 Protein of unknown function (DUF4256) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003467 286.0
BYD1_k127_3813062_23 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003662 283.0
BYD1_k127_3813062_24 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001833 264.0
BYD1_k127_3813062_25 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000003623 247.0
BYD1_k127_3813062_26 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000001166 237.0
BYD1_k127_3813062_27 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000006369 225.0
BYD1_k127_3813062_28 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000001496 199.0
BYD1_k127_3813062_29 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000001607 182.0
BYD1_k127_3813062_3 Protein of unknown function (DUF1254) - - - 2.694e-196 624.0
BYD1_k127_3813062_30 YjbR - - - 0.000000000000000000000000000000000000000000001321 167.0
BYD1_k127_3813062_31 Sigma-70 region 2 - - - 0.00000000000000000000000000000000000000000002228 168.0
BYD1_k127_3813062_32 Cell division protein K03589 - - 0.00000000000000000000000000000000000000000002494 172.0
BYD1_k127_3813062_33 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000526 169.0
BYD1_k127_3813062_34 PFAM Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000004755 156.0
BYD1_k127_3813062_35 transcriptional regulator - - - 0.0000000000000000000000000000000000000001013 152.0
BYD1_k127_3813062_36 - - - - 0.000000000000000000000000000127 122.0
BYD1_k127_3813062_37 - - - - 0.000000000000000000000000005975 117.0
BYD1_k127_3813062_38 AntiSigma factor - - - 0.00000000000000000000000008037 117.0
BYD1_k127_3813062_39 Biotin-requiring enzyme - - - 0.0000000000000000000000004238 108.0
BYD1_k127_3813062_4 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 591.0
BYD1_k127_3813062_40 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000001001 82.0
BYD1_k127_3813062_41 - - - - 0.000000000000001453 82.0
BYD1_k127_3813062_42 Evidence 5 No homology to any previously reported sequences K20952 - - 0.000000006795 68.0
BYD1_k127_3813062_43 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000002256 67.0
BYD1_k127_3813062_44 SnoaL-like polyketide cyclase - - - 0.0000058 54.0
BYD1_k127_3813062_5 Protein of unknown function (DUF1254) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008561 607.0
BYD1_k127_3813062_6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009129 576.0
BYD1_k127_3813062_7 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000592 540.0
BYD1_k127_3813062_8 CHAT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 564.0
BYD1_k127_3813062_9 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 500.0
BYD1_k127_3974683_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1020.0
BYD1_k127_3974683_1 Outer membrane protein assembly complex, YaeT protein K07277 - - 1.595e-265 843.0
BYD1_k127_3974683_10 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001595 259.0
BYD1_k127_3974683_11 Protein of unknown function (DUF421) - - - 0.000000000000000000000000000000000000000000000000000000000004999 215.0
BYD1_k127_3974683_12 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000001043 196.0
BYD1_k127_3974683_13 domain protein K20276 - - 0.000000000000000000000000000000000000000000000000002444 185.0
BYD1_k127_3974683_14 membrane K06142 - - 0.000000000000000000000000000000000000000000000003424 179.0
BYD1_k127_3974683_15 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000005938 177.0
BYD1_k127_3974683_16 PFAM Outer membrane protein (OmpH-like) K06142 - - 0.000000000000000000001895 100.0
BYD1_k127_3974683_17 AhpC/TSA family - - - 0.000000001371 63.0
BYD1_k127_3974683_2 Fumarate reductase flavoprotein C-term K00278 - 1.4.3.16 5.246e-218 688.0
BYD1_k127_3974683_3 Outer membrane protein beta-barrel domain - - - 1.391e-203 652.0
BYD1_k127_3974683_4 Integral membrane protein TerC K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 361.0
BYD1_k127_3974683_5 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 324.0
BYD1_k127_3974683_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008029 321.0
BYD1_k127_3974683_7 aldo-keto reductase (NADP) activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 301.0
BYD1_k127_3974683_8 Putative neutral zinc metallopeptidase K06973 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 284.0
BYD1_k127_3974683_9 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001847 273.0
BYD1_k127_4168428_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 2.226e-240 756.0
BYD1_k127_4168428_1 AMP-dependent synthetase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000856 576.0
BYD1_k127_4168428_10 Sulfotransferase domain - - - 0.000000000000000000000000001629 124.0
BYD1_k127_4168428_11 Uncharacterized protein conserved in bacteria (DUF2147) - - - 0.00000000000000001865 91.0
BYD1_k127_4168428_12 - - - - 0.00008613 54.0
BYD1_k127_4168428_2 UDP-4-amino-4-deoxy-L-arabinose aminotransferase K02805 - 2.6.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 469.0
BYD1_k127_4168428_3 membrane protein involved in D-alanine export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 456.0
BYD1_k127_4168428_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 439.0
BYD1_k127_4168428_5 Uncharacterized protein family (UPF0051) K09014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002303 265.0
BYD1_k127_4168428_6 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002201 261.0
BYD1_k127_4168428_7 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000002771 212.0
BYD1_k127_4168428_8 Sulfotransferase domain - - - 0.000000000000000000000000000000000000003323 160.0
BYD1_k127_4168428_9 CAAX protease self-immunity - - - 0.0000000000000000000000000000000000001389 153.0
BYD1_k127_41793_0 acetoacetate metabolism regulatory protein AtoC K07714 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000243 542.0
BYD1_k127_41793_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 505.0
BYD1_k127_41793_2 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006642 473.0
BYD1_k127_41793_3 ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 377.0
BYD1_k127_41793_4 COGs COG1668 ABC-type Na efflux pump permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 385.0
BYD1_k127_41793_5 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 356.0
BYD1_k127_41793_6 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000075 252.0
BYD1_k127_41793_7 - - - - 0.0000000000000000000000000000000000000000000000000000173 190.0
BYD1_k127_41793_8 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000000000000000001616 180.0
BYD1_k127_41793_9 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000002716 172.0
BYD1_k127_4206537_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0 1064.0
BYD1_k127_4206537_1 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 450.0
BYD1_k127_4206537_2 PFAM Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 368.0
BYD1_k127_4206537_3 PFAM MerR family regulatory protein K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 317.0
BYD1_k127_4206537_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000002221 181.0
BYD1_k127_4206537_5 helix_turn_helix, mercury resistance - - - 0.000000000000000000000000000000000000000007217 156.0
BYD1_k127_4206537_6 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.000000000000001066 78.0
BYD1_k127_4375273_0 usher protein - - - 4.509e-228 744.0
BYD1_k127_4375273_1 Domain of unknown function (DUF4402) - - - 0.000000000000000000000000000000000002788 143.0
BYD1_k127_4375273_2 Alpha-2-Macroglobulin K06894 - - 0.00000000001094 67.0
BYD1_k127_4375273_3 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end - - - 0.00004623 51.0
BYD1_k127_4432119_0 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 360.0
BYD1_k127_4432119_1 PFAM Phosphatidic acid phosphatase type 2 haloperoxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003418 289.0
BYD1_k127_4432119_2 SPTR CHU large protein - - - 0.0000000000000038 83.0
BYD1_k127_4497879_0 - - - - 0.00000000000000000000000000000000000000000005722 166.0
BYD1_k127_4497879_3 - - - - 0.0002243 51.0
BYD1_k127_4520965_0 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 324.0
BYD1_k127_4520965_1 NmrA-like family K00091 - 1.1.1.219 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 314.0
BYD1_k127_4520965_2 NmrA-like family K00091 - 1.1.1.219 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004629 279.0
BYD1_k127_4520965_3 KR domain K07124 - - 0.000000000000000000000000000000000000000000000000000000009305 207.0
BYD1_k127_4520965_4 dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000006361 169.0
BYD1_k127_4520965_5 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000364 145.0
BYD1_k127_4520965_6 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000002638 128.0
BYD1_k127_4526550_0 Alpha-1,2-mannosidase - - - 0.0 1031.0
BYD1_k127_4526550_1 Peptidase family C69 - - - 6.556e-203 646.0
BYD1_k127_4526550_2 37-kD nucleoid-associated bacterial protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 390.0
BYD1_k127_4526550_3 translation initiation factor activity K06996 - - 0.00000000008108 62.0
BYD1_k127_4678142_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1090.0
BYD1_k127_4678142_1 Belongs to the peptidase S8 family - - - 1.153e-225 743.0
BYD1_k127_4678142_10 bacteriocin export ABC transporter, lactococcin 972 group K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 344.0
BYD1_k127_4678142_11 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 375.0
BYD1_k127_4678142_12 peptidase activity, acting on L-amino acid peptides K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 346.0
BYD1_k127_4678142_13 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 321.0
BYD1_k127_4678142_14 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008582 248.0
BYD1_k127_4678142_15 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000001985 188.0
BYD1_k127_4678142_16 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K05996,K06987,K07752 - 3.4.17.18,3.4.17.22 0.00000000000000000000000000000000000000000000000005105 202.0
BYD1_k127_4678142_17 - - - - 0.00000000000000000000000000000000000000001659 156.0
BYD1_k127_4678142_18 Single-strand binding protein family K03111 - - 0.00000000000000000000000000000000002828 137.0
BYD1_k127_4678142_19 Cation transport regulator K06197 - - 0.00000000000000000000000000000003158 126.0
BYD1_k127_4678142_2 Large family of predicted nucleotide-binding domains K07175 - - 2.632e-207 657.0
BYD1_k127_4678142_20 single-stranded DNA-binding protein K03111 - - 0.00000000000000000000000000000003871 128.0
BYD1_k127_4678142_21 extracellular matrix structural constituent - - - 0.000000000000000000005173 110.0
BYD1_k127_4678142_22 alkaline phosphatase - - - 0.0000000000000000008944 103.0
BYD1_k127_4678142_23 domain, Protein K20276 - - 0.0000000000000001042 96.0
BYD1_k127_4678142_24 Fungalysin metallopeptidase (M36) - - - 0.00009252 57.0
BYD1_k127_4678142_3 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 592.0
BYD1_k127_4678142_4 Bacterial regulatory protein, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 526.0
BYD1_k127_4678142_5 ROK family K00845,K13967,K19979,K20433 - 2.7.1.188,2.7.1.2,2.7.1.214,2.7.1.60,5.1.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 451.0
BYD1_k127_4678142_6 permease K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003934 419.0
BYD1_k127_4678142_7 ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005777 402.0
BYD1_k127_4678142_8 Glutamine cyclotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 370.0
BYD1_k127_4678142_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 372.0
BYD1_k127_4801061_0 2-oxoglutarate dehydrogenase, E1 K00164 - 1.2.4.2 0.0 1129.0
BYD1_k127_4801061_1 histidine kinase-, DNA gyrase B - - - 6.481e-270 846.0
BYD1_k127_4801061_10 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006868 268.0
BYD1_k127_4801061_11 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003613 255.0
BYD1_k127_4801061_12 phosphatidylinositol metabolic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002353 263.0
BYD1_k127_4801061_13 Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000056 224.0
BYD1_k127_4801061_14 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000002288 211.0
BYD1_k127_4801061_15 - - - - 0.00000000000000000000000000000000000000000000000000000004569 206.0
BYD1_k127_4801061_16 3-demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000000000006385 196.0
BYD1_k127_4801061_17 4Fe-4S binding domain - - - 0.0000000000000000000000000001125 115.0
BYD1_k127_4801061_18 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000002511 80.0
BYD1_k127_4801061_19 Protein of unknown function (DUF3494) - - - 0.00000003103 66.0
BYD1_k127_4801061_2 cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 1.543e-267 840.0
BYD1_k127_4801061_3 2-oxoacid acceptor oxidoreductase, alpha subunit K00174 - 1.2.7.11,1.2.7.3 1.214e-243 767.0
BYD1_k127_4801061_4 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 450.0
BYD1_k127_4801061_5 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 454.0
BYD1_k127_4801061_6 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006086 422.0
BYD1_k127_4801061_7 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 394.0
BYD1_k127_4801061_8 domain protein K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009475 373.0
BYD1_k127_4801061_9 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000176 295.0
BYD1_k127_4874739_0 Carbamoyltransferase C-terminus K00612 - - 2.141e-272 850.0
BYD1_k127_4874739_1 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. K19519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001923 278.0
BYD1_k127_4874739_10 - - - - 0.00000001208 60.0
BYD1_k127_4874739_2 Phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000005613 233.0
BYD1_k127_4874739_3 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000002562 225.0
BYD1_k127_4874739_4 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000111 159.0
BYD1_k127_4874739_5 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000000001834 149.0
BYD1_k127_4874739_6 - - - - 0.00000000000000000000001238 105.0
BYD1_k127_4874739_7 - - - - 0.00000000000000003022 81.0
BYD1_k127_4874739_8 lipolytic protein G-D-S-L family - - - 0.000000000002421 79.0
BYD1_k127_4874739_9 - - - - 0.0000000001058 63.0
BYD1_k127_491133_0 Outer membrane protein beta-barrel family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 445.0
BYD1_k127_491133_1 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 392.0
BYD1_k127_491133_2 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000001563 198.0
BYD1_k127_491133_3 Protein of unknown function (Porph_ging) - - - 0.000000000000000000000000000000005707 138.0
BYD1_k127_491133_4 Two component transcriptional regulator, winged helix family - - - 0.00000000000001863 74.0
BYD1_k127_491133_5 - - - - 0.0000001271 61.0
BYD1_k127_4971322_0 PFAM sodium hydrogen exchanger - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 572.0
BYD1_k127_4971322_1 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 410.0
BYD1_k127_4971322_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 336.0
BYD1_k127_4971322_3 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000006083 209.0
BYD1_k127_4971322_4 phosphohistidine phosphatase K08296 - - 0.0000000000000000000002236 102.0
BYD1_k127_4971322_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.000000000004861 68.0
BYD1_k127_498173_0 Molybdopterin oxidoreductase K07812,K08352 - 1.7.2.3,1.8.5.5 0.0 1011.0
BYD1_k127_498173_1 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 5.676e-212 663.0
BYD1_k127_498173_10 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000001651 228.0
BYD1_k127_498173_11 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000001352 180.0
BYD1_k127_498173_12 Rhodanese Homology Domain - - - 0.0000000000000000000000000000001328 130.0
BYD1_k127_498173_2 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 606.0
BYD1_k127_498173_3 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 574.0
BYD1_k127_498173_4 DEAD DEAH box helicase domain protein K03654 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 539.0
BYD1_k127_498173_5 NAD dependent epimerase dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 492.0
BYD1_k127_498173_6 Polysulphide reductase, NrfD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 417.0
BYD1_k127_498173_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003999 417.0
BYD1_k127_498173_8 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 324.0
BYD1_k127_498173_9 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000001011 241.0
BYD1_k127_5064383_0 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004191 551.0
BYD1_k127_5064383_1 Belongs to the methyltransferase superfamily K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 399.0
BYD1_k127_5064383_10 MazG nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000000000000000000000006262 164.0
BYD1_k127_5064383_11 THIoesterase K18700 - 3.1.2.29 0.0000000000000000000000000000000000002111 145.0
BYD1_k127_5064383_12 - - - - 0.0000000000000000000000000000000007151 136.0
BYD1_k127_5064383_14 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000001455 62.0
BYD1_k127_5064383_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 399.0
BYD1_k127_5064383_3 Neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 345.0
BYD1_k127_5064383_4 transferase activity, transferring acyl groups other than amino-acyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 333.0
BYD1_k127_5064383_5 Domain of unknown function (DUF4349) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000468 288.0
BYD1_k127_5064383_6 Signal transduction histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000002341 266.0
BYD1_k127_5064383_7 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001346 254.0
BYD1_k127_5064383_8 PAP2 superfamily K19302 - 3.6.1.27 0.00000000000000000000000000000000000000000000007137 178.0
BYD1_k127_5064383_9 PFAM OsmC-like protein - - - 0.00000000000000000000000000000000000000000000494 166.0
BYD1_k127_5123633_0 PFAM Glycosyl transferase family 2 K20534 - - 0.000000000000000000000000000000000000000000000000001108 194.0
BYD1_k127_5123633_1 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.0000000000000000001783 103.0
BYD1_k127_5123633_2 Acetyltransferase (GNAT) domain - - - 0.000000002709 66.0
BYD1_k127_5141201_0 Belongs to the glycosyl hydrolase 31 family K01187 - 3.2.1.20 2.937e-224 722.0
BYD1_k127_5141201_1 Nucleoside K03289,K11537 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 600.0
BYD1_k127_5141201_10 SRPBCC domain-containing protein - - - 0.000000000000000000000000000000000000000001421 160.0
BYD1_k127_5141201_11 - - - - 0.0000000000000004159 89.0
BYD1_k127_5141201_12 Protein of unknown function (DUF1624) - - - 0.00000000000007623 83.0
BYD1_k127_5141201_13 self proteolysis - - - 0.00000000001404 79.0
BYD1_k127_5141201_14 Cleaved Adhesin Domain - - - 0.00001347 57.0
BYD1_k127_5141201_15 Fibronectin type 3 domain - - - 0.00001782 59.0
BYD1_k127_5141201_2 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 543.0
BYD1_k127_5141201_3 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009125 530.0
BYD1_k127_5141201_4 Integral membrane protein TerC family K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004764 384.0
BYD1_k127_5141201_5 C-terminal domain of CHU protein family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007308 353.0
BYD1_k127_5141201_6 amino acid activation for nonribosomal peptide biosynthetic process K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009334 320.0
BYD1_k127_5141201_7 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000002825 258.0
BYD1_k127_5141201_8 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000009967 221.0
BYD1_k127_5141201_9 PFAM SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000003475 168.0
BYD1_k127_514564_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 410.0
BYD1_k127_514564_1 Pregnancy-associated plasma protein-A - - - 0.00000000000000000000000000000000000000000000000000000000001458 235.0
BYD1_k127_514564_2 Hsp70 protein K04043 - - 0.0000000000000000000000000000000000000000000000003042 179.0
BYD1_k127_514564_3 - - - - 0.0000000000000000000000007049 120.0
BYD1_k127_514564_4 - - - - 0.0000000000398 72.0
BYD1_k127_5148889_0 elongation factor G K02355 - - 1.294e-267 839.0
BYD1_k127_5148889_1 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 451.0
BYD1_k127_5148889_2 SusD family K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 405.0
BYD1_k127_5148889_3 TonB-dependent receptor plug domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003728 367.0
BYD1_k127_5409426_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000005434 232.0
BYD1_k127_5409426_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000003279 176.0
BYD1_k127_5409426_2 Belongs to the peptidase S8 family K01179 - 3.2.1.4 0.00000000000000000000006466 108.0
BYD1_k127_5430732_0 Cytochrome c oxidase, subunit I K04561 - 1.7.2.5 0.0 1194.0
BYD1_k127_5430732_1 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.0 1010.0
BYD1_k127_5430732_10 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.665e-203 643.0
BYD1_k127_5430732_11 acyl-CoA dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 604.0
BYD1_k127_5430732_12 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 599.0
BYD1_k127_5430732_13 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 545.0
BYD1_k127_5430732_14 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 548.0
BYD1_k127_5430732_15 HMGL-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 530.0
BYD1_k127_5430732_16 COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 562.0
BYD1_k127_5430732_17 FAD dependent oxidoreductase K00231 - 1.3.3.15,1.3.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 504.0
BYD1_k127_5430732_18 unfolded protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 474.0
BYD1_k127_5430732_19 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 467.0
BYD1_k127_5430732_2 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 5.161e-273 847.0
BYD1_k127_5430732_20 PFAM membrane bound O-acyl transferase MBOAT K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 464.0
BYD1_k127_5430732_21 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 427.0
BYD1_k127_5430732_22 Transporter, major facilitator family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002954 417.0
BYD1_k127_5430732_23 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 408.0
BYD1_k127_5430732_24 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 412.0
BYD1_k127_5430732_25 MORN repeat variant - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 409.0
BYD1_k127_5430732_26 PFAM Coenzyme A transferase K01027,K01028,K01031,K01034 - 2.8.3.5,2.8.3.6,2.8.3.8,2.8.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 394.0
BYD1_k127_5430732_27 PFAM Coenzyme A transferase K01029,K01032 - 2.8.3.5,2.8.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 391.0
BYD1_k127_5430732_28 iron-sulfur cluster-binding protein K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 389.0
BYD1_k127_5430732_29 Belongs to the acetokinase family K00929 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0044237,GO:0044424,GO:0044464,GO:0047761 2.7.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 374.0
BYD1_k127_5430732_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 4.718e-267 834.0
BYD1_k127_5430732_30 beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 349.0
BYD1_k127_5430732_31 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001688 363.0
BYD1_k127_5430732_32 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004507 345.0
BYD1_k127_5430732_33 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 343.0
BYD1_k127_5430732_34 CAAX protease self-immunity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 315.0
BYD1_k127_5430732_35 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 315.0
BYD1_k127_5430732_36 FES K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 310.0
BYD1_k127_5430732_37 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 320.0
BYD1_k127_5430732_38 Peptidase, M23 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 308.0
BYD1_k127_5430732_39 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 304.0
BYD1_k127_5430732_4 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 5.647e-262 817.0
BYD1_k127_5430732_40 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001335 270.0
BYD1_k127_5430732_41 COG2755 Lysophospholipase L1 and related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001486 260.0
BYD1_k127_5430732_42 PFAM fructosamine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009144 252.0
BYD1_k127_5430732_43 Helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000006545 243.0
BYD1_k127_5430732_44 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000001181 245.0
BYD1_k127_5430732_45 NADPH-dependent FMN reductase K11748 - - 0.00000000000000000000000000000000000000000000000000000000000000000002378 237.0
BYD1_k127_5430732_46 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000000000000000000000000000001449 230.0
BYD1_k127_5430732_47 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000008225 218.0
BYD1_k127_5430732_48 Gliding motility-associated lipoprotein GldD - - - 0.00000000000000000000000000000000000000000000000000000000002402 212.0
BYD1_k127_5430732_49 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000003872 207.0
BYD1_k127_5430732_5 membrane protein (DUF2339) - - - 7.261e-252 799.0
BYD1_k127_5430732_50 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000005651 200.0
BYD1_k127_5430732_51 Ribose 5-phosphate isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000009051 187.0
BYD1_k127_5430732_52 pfam nudix - - - 0.000000000000000000000000000000000000000000000000001038 186.0
BYD1_k127_5430732_53 - - - - 0.00000000000000000000000000000000000000000000000003286 189.0
BYD1_k127_5430732_54 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000000000001839 183.0
BYD1_k127_5430732_55 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000002203 177.0
BYD1_k127_5430732_57 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000004011 167.0
BYD1_k127_5430732_58 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000000000000000000009175 159.0
BYD1_k127_5430732_59 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA - - - 0.0000000000000000000000000000000000000000015 160.0
BYD1_k127_5430732_6 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 8.882e-237 747.0
BYD1_k127_5430732_60 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000002985 158.0
BYD1_k127_5430732_61 tRNA-binding protein K06878 - - 0.00000000000000000000000000000000000000003346 154.0
BYD1_k127_5430732_62 FMN_bind - - - 0.0000000000000000000000000000000000000004805 155.0
BYD1_k127_5430732_63 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000000000000000000000000000000000001148 156.0
BYD1_k127_5430732_64 Belongs to the bacterial histone-like protein family K03530 - - 0.0000000000000000000000000000000000004496 141.0
BYD1_k127_5430732_66 Transcriptional regulator, BadM Rrf2 family - - - 0.0000000000000000000000001372 110.0
BYD1_k127_5430732_67 2'-5' RNA ligase superfamily K01975 - 3.1.4.58 0.0000000000000000000000001799 113.0
BYD1_k127_5430732_68 - - - - 0.00000000000000000006684 90.0
BYD1_k127_5430732_69 - - - - 0.00000000000000003062 87.0
BYD1_k127_5430732_7 protein involved in exopolysaccharide biosynthesis - - - 2.32e-232 758.0
BYD1_k127_5430732_70 - - - - 0.0000000000000004927 84.0
BYD1_k127_5430732_71 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000004975 76.0
BYD1_k127_5430732_72 - - - - 0.00000000000004537 72.0
BYD1_k127_5430732_73 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.0000000000004013 72.0
BYD1_k127_5430732_74 - - - - 0.000000000001497 75.0
BYD1_k127_5430732_76 - - - - 0.000001674 49.0
BYD1_k127_5430732_77 - - - - 0.0008496 48.0
BYD1_k127_5430732_8 ribonuclease, Rne Rng family K08301 - - 4.791e-212 670.0
BYD1_k127_5430732_9 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961,K01965,K01968 - 6.3.4.14,6.4.1.2,6.4.1.3,6.4.1.4 3.806e-207 664.0
BYD1_k127_5441990_0 Protein of unknown function (DUF2723) - - - 0.0 1030.0
BYD1_k127_5441990_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 8.939e-273 855.0
BYD1_k127_5441990_10 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 441.0
BYD1_k127_5441990_11 protein conserved in bacteria (DUF2179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 420.0
BYD1_k127_5441990_12 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005542 389.0
BYD1_k127_5441990_13 Belongs to the 5'-nucleotidase family K01119,K11751 - 3.1.3.5,3.1.3.6,3.1.4.16,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 387.0
BYD1_k127_5441990_14 protein conserved in bacteria (DUF2179) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 367.0
BYD1_k127_5441990_15 GHMP kinases N terminal domain K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 346.0
BYD1_k127_5441990_16 diphosphomevalonate decarboxylase K01597 - 4.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 335.0
BYD1_k127_5441990_17 Gliding motility-associated protein GldM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 325.0
BYD1_k127_5441990_18 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001314 285.0
BYD1_k127_5441990_19 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001232 270.0
BYD1_k127_5441990_2 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 3.089e-272 861.0
BYD1_k127_5441990_20 TIGRFAM gliding motility-associated protein GldL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005171 247.0
BYD1_k127_5441990_21 Gliding motility-associated protein GldN - - - 0.00000000000000000000000000000000000000000000000000000000000000000001827 242.0
BYD1_k127_5441990_22 GHMP Kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000009181 240.0
BYD1_k127_5441990_23 PFAM Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000002794 224.0
BYD1_k127_5441990_24 Calcineurin-like phosphoesterase K07313 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000002586 204.0
BYD1_k127_5441990_25 Glyoxalase-like domain K07032 - - 0.000000000000000000000000000000000000000000000000000001252 194.0
BYD1_k127_5441990_26 Type IX secretion system membrane protein PorP/SprF - - - 0.00000000000000000000000000000000000000000000000003422 191.0
BYD1_k127_5441990_27 Lipopolysaccharide-assembly - - - 0.000000000000000000000000000000000000000000008736 168.0
BYD1_k127_5441990_28 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - 0.00000000000000000000000000000000000000000003591 164.0
BYD1_k127_5441990_29 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000002723 111.0
BYD1_k127_5441990_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 4.73e-269 836.0
BYD1_k127_5441990_30 - - - - 0.000000000000000000000474 108.0
BYD1_k127_5441990_31 Preprotein translocase SecG subunit K03075 - - 0.000000000000000000001912 97.0
BYD1_k127_5441990_32 Domain of unknown function (DUF4468) with TBP-like fold - - - 0.0000003951 59.0
BYD1_k127_5441990_4 Adenine deaminase C-terminal domain K01486 - 3.5.4.2 5.203e-198 631.0
BYD1_k127_5441990_5 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007062 561.0
BYD1_k127_5441990_6 Hydroxymethylglutaryl-coenzyme A reductase K00054 - 1.1.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 550.0
BYD1_k127_5441990_7 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 531.0
BYD1_k127_5441990_8 Peptidase M1, membrane alanine aminopeptidase K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 535.0
BYD1_k127_5441990_9 Sigma-54 interaction domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006646 522.0
BYD1_k127_5531579_0 Phospholipase, patatin family K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007387 267.0
BYD1_k127_5531579_1 Response regulator of the LytR AlgR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001039 244.0
BYD1_k127_5531579_2 PFAM histidine kinase internal region - - - 0.000000000000000000000000000000000000000000000000000008515 202.0
BYD1_k127_5531579_3 Thioredoxin-like domain K03671 - - 0.0000000000000000000000000000000000000001975 153.0
BYD1_k127_5531579_4 PFAM Glycosyl hydrolases family 16 - - - 0.000007661 59.0
BYD1_k127_5531579_5 COG1404 Subtilisin-like serine proteases K13276 GO:0005575,GO:0005576 - 0.00002312 58.0
BYD1_k127_5543924_0 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 500.0
BYD1_k127_5543924_1 Domain of unknown function (DUF4173) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 313.0
BYD1_k127_5543924_2 Endonuclease exonuclease phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002847 289.0
BYD1_k127_5543924_3 ComEC Rec2-like protein K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003338 269.0
BYD1_k127_5543924_4 - - - - 0.0000000911 59.0
BYD1_k127_5640530_0 TonB dependent receptor - - - 0.0 1092.0
BYD1_k127_5640530_1 Pkd domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009246 482.0
BYD1_k127_5640530_2 MORN repeat variant - - - 0.00000000000000000000000000000000000001009 149.0
BYD1_k127_5640530_3 TonB-dependent receptor - - - 0.0000000000001773 74.0
BYD1_k127_5650586_0 Peptidase family M28 - - - 4.546e-208 658.0
BYD1_k127_5650586_1 impB/mucB/samB family K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 535.0
BYD1_k127_5650586_2 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 476.0
BYD1_k127_5650586_3 TIGRFAM TIGR02757 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 319.0
BYD1_k127_5650586_4 Helix-turn-helix XRE-family like proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 308.0
BYD1_k127_5650586_5 DNA polymerase alpha chain like domain K02337 - 2.7.7.7 0.0000000000000000000001463 100.0
BYD1_k127_5737483_0 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 450.0
BYD1_k127_5737483_1 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000941 425.0
BYD1_k127_5737483_2 Polyketide synthase of type I K13612,K13613,K13615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005499 368.0
BYD1_k127_5737483_3 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 329.0
BYD1_k127_5737483_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000003361 243.0
BYD1_k127_5737483_5 Short-chain dehydrogenase reductase sdr - - - 0.00000000000000000000000000000000000000000000000000000000000007763 220.0
BYD1_k127_5737483_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000002064 58.0
BYD1_k127_589560_0 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 337.0
BYD1_k127_589560_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000473 201.0
BYD1_k127_589560_2 Enoyl-CoA hydratase/isomerase K13766 - 4.2.1.18 0.0005623 44.0
BYD1_k127_5918038_0 Carboxypeptidase regulatory-like domain - - - 0.0 1245.0
BYD1_k127_5918038_1 SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 K00239 - 1.3.5.1,1.3.5.4 0.0 1079.0
BYD1_k127_5918038_10 PFAM Integral membrane protein TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 361.0
BYD1_k127_5918038_11 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 318.0
BYD1_k127_5918038_12 DNA polymerase III, delta subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 308.0
BYD1_k127_5918038_13 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001911 287.0
BYD1_k127_5918038_14 stress-induced protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000977 280.0
BYD1_k127_5918038_15 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002048 274.0
BYD1_k127_5918038_16 Response regulator of the LytR AlgR family K02477 - - 0.0000000000000000000000000000000000000000000000000000000000000000002522 237.0
BYD1_k127_5918038_17 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000004423 233.0
BYD1_k127_5918038_18 Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP-N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues K01791,K08068 - 3.2.1.183,5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000006907 227.0
BYD1_k127_5918038_19 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.00000000000000000000000000000000000000000000000000000000000008868 218.0
BYD1_k127_5918038_2 Penicillin-binding Protein K05366 - 2.4.1.129,3.4.16.4 8.631e-263 831.0
BYD1_k127_5918038_20 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000005945 207.0
BYD1_k127_5918038_21 - - - - 0.0000000000000000000000000000000000000000000000000168 184.0
BYD1_k127_5918038_22 TIGRFAM succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family K00241 - - 0.000000000000000000000000000000000000000000000002729 180.0
BYD1_k127_5918038_23 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000002536 174.0
BYD1_k127_5918038_24 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0008808,GO:0009058,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0019637,GO:0030572,GO:0032048,GO:0032049,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0071704,GO:0090407,GO:1901576 - 0.000000000000000000000000000000000000004247 160.0
BYD1_k127_5918038_25 domain, Protein K11016 - - 0.0000000000000000000000000002386 132.0
BYD1_k127_5918038_26 Hsp20/alpha crystallin family K13993 - - 0.00000000000000000000000001471 113.0
BYD1_k127_5918038_27 - - - - 0.00000000000000000000000003123 113.0
BYD1_k127_5918038_28 GldH lipoprotein - GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000004644 111.0
BYD1_k127_5918038_29 PFAM Bacterial regulatory helix-turn-helix proteins, AraC family - - - 0.000000000000000000000001249 117.0
BYD1_k127_5918038_3 Psort location Cytoplasmic, score K01915 - 6.3.1.2 2.588e-222 700.0
BYD1_k127_5918038_30 amine dehydrogenase activity K01224 - 3.2.1.89 0.000000001375 70.0
BYD1_k127_5918038_32 Lipolytic protein - - - 0.00003299 53.0
BYD1_k127_5918038_33 WD40-like Beta Propeller Repeat K03641 - - 0.0005371 52.0
BYD1_k127_5918038_4 SusD family K21572 - - 2.514e-206 653.0
BYD1_k127_5918038_5 PFAM Aminopeptidase P, N-terminal domain K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 557.0
BYD1_k127_5918038_6 Aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006972 491.0
BYD1_k127_5918038_7 Rhodanase C-terminal K07146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 439.0
BYD1_k127_5918038_8 PSP1 C-terminal conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 434.0
BYD1_k127_5918038_9 Succinate dehydrogenase Fumarate reductase K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005888 395.0
BYD1_k127_5966150_0 Carboxypeptidase regulatory-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 550.0
BYD1_k127_5966150_1 CHAT domain - - - 0.000000003945 67.0
BYD1_k127_5966150_2 Domain of unknown function (DUF4249) - - - 0.000005039 57.0
BYD1_k127_5966150_3 - - - - 0.0001967 53.0
BYD1_k127_6116194_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 289.0
BYD1_k127_6116194_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000841 257.0
BYD1_k127_6116194_2 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000001142 249.0
BYD1_k127_6116194_3 Domain of Unknown Function (DUF1599) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001864 245.0
BYD1_k127_6116194_4 DoxX family - - - 0.0000000000000000000000000000000000000000000000000000000000359 216.0
BYD1_k127_6116194_5 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000002303 109.0
BYD1_k127_6116194_6 protein trimerization K02453 - - 0.000000000000008979 81.0
BYD1_k127_6139325_0 TonB-dependent receptor K02014 - - 6.634e-269 843.0
BYD1_k127_6139325_1 Glucose Sorbosone dehydrogenase K21430 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 590.0
BYD1_k127_6139325_2 Transcriptional regulator - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 350.0
BYD1_k127_6163718_0 cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 1.148e-264 831.0
BYD1_k127_6163718_1 TonB-dependent receptor plug - - - 5.401e-212 699.0
BYD1_k127_6163718_10 - K03616 - - 0.00000000000000000000000001161 117.0
BYD1_k127_6163718_11 amine dehydrogenase activity - - - 0.0000000001321 74.0
BYD1_k127_6163718_12 NMT1/THI5 like - - - 0.0001385 53.0
BYD1_k127_6163718_2 Selenocysteine lyase - - - 1.501e-210 666.0
BYD1_k127_6163718_3 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008676 286.0
BYD1_k127_6163718_4 PFAM Two component regulator propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006693 275.0
BYD1_k127_6163718_5 PFAM FecR protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006069 254.0
BYD1_k127_6163718_6 Thioredoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000001118 246.0
BYD1_k127_6163718_7 Pfam:SusD - - - 0.0000000000000000000000000000000000000000000000000000000002447 222.0
BYD1_k127_6163718_8 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000008026 201.0
BYD1_k127_6163718_9 FMN-binding domain protein - - - 0.0000000000000000000000000000000000001453 154.0
BYD1_k127_6190786_0 Lamin Tail Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 541.0
BYD1_k127_6190786_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 411.0
BYD1_k127_6190786_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000006902 267.0
BYD1_k127_6190786_3 tRNA_anti-like - - - 0.0000136 50.0
BYD1_k127_6371241_0 glutamine synthetase K01915 - 6.3.1.2 9.579e-295 920.0
BYD1_k127_6371241_1 ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 514.0
BYD1_k127_6371241_10 Polynucleotide kinase 3 phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000003909 172.0
BYD1_k127_6371241_2 GHMP kinase, N-terminal domain protein K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 464.0
BYD1_k127_6371241_3 PFAM ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007836 373.0
BYD1_k127_6371241_4 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 343.0
BYD1_k127_6371241_5 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036,K02068,K06857 - 3.6.3.27,3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 340.0
BYD1_k127_6371241_6 phosphate ion binding K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 340.0
BYD1_k127_6371241_7 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 339.0
BYD1_k127_6371241_8 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000003352 248.0
BYD1_k127_6371241_9 Nucleotidyl transferase K15669 - 2.7.7.71 0.00000000000000000000000000000000000000000000000000000000000000001272 231.0
BYD1_k127_638443_0 Domain of unknown function (DUF1287) K09974 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 282.0
BYD1_k127_638443_1 - - - - 0.000000000000000000000000000000000000000000000000000000000006184 212.0
BYD1_k127_638443_2 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000000000000000000000000000311 202.0
BYD1_k127_638443_3 - - - - 0.000000000000000000000000005479 114.0
BYD1_k127_638443_4 Alpha-L-fucosidase K01206 - 3.2.1.51 0.000001867 51.0
BYD1_k127_6405542_0 Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 339.0
BYD1_k127_6405542_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 289.0
BYD1_k127_6405542_2 TIGRFAM lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.000000000000000000000000000000000000000000000000000000000000157 231.0
BYD1_k127_6405542_3 - - - - 0.00000003456 64.0
BYD1_k127_6427099_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 3.466e-314 975.0
BYD1_k127_6427099_1 SecY translocase K03076 - - 2.635e-212 666.0
BYD1_k127_6427099_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 315.0
BYD1_k127_6427099_11 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005261 312.0
BYD1_k127_6427099_12 C4-dicarboxylate anaerobic carrier - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004409 299.0
BYD1_k127_6427099_13 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 282.0
BYD1_k127_6427099_14 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 282.0
BYD1_k127_6427099_15 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000791 271.0
BYD1_k127_6427099_16 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000007649 244.0
BYD1_k127_6427099_17 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000001193 241.0
BYD1_k127_6427099_18 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000002971 237.0
BYD1_k127_6427099_19 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000001398 237.0
BYD1_k127_6427099_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 3.179e-204 643.0
BYD1_k127_6427099_20 Bacterial regulatory proteins, crp family K01420 - - 0.000000000000000000000000000000000000000000000000000000000000000001033 233.0
BYD1_k127_6427099_21 Ribosomal protein S11 K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000001723 219.0
BYD1_k127_6427099_22 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000006173 218.0
BYD1_k127_6427099_23 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000001407 216.0
BYD1_k127_6427099_24 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.00000000000000000000000000000000000000000000000000000000000003195 218.0
BYD1_k127_6427099_25 Ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000005703 214.0
BYD1_k127_6427099_26 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000008281 211.0
BYD1_k127_6427099_27 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000003431 205.0
BYD1_k127_6427099_28 NADP oxidoreductase coenzyme F420-dependent - - - 0.000000000000000000000000000000000000000000000000000001198 201.0
BYD1_k127_6427099_29 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000000000000000000000001294 188.0
BYD1_k127_6427099_3 PFAM TonB-dependent Receptor Plug - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 592.0
BYD1_k127_6427099_30 Ribosomal protein S10p/S20e K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000002603 177.0
BYD1_k127_6427099_31 UbiA prenyltransferase family K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000002207 183.0
BYD1_k127_6427099_32 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000108 163.0
BYD1_k127_6427099_33 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000116 154.0
BYD1_k127_6427099_34 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000005573 145.0
BYD1_k127_6427099_35 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000001548 142.0
BYD1_k127_6427099_36 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000403 139.0
BYD1_k127_6427099_37 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.0000000000000000000000000000000000101 136.0
BYD1_k127_6427099_38 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000002421 136.0
BYD1_k127_6427099_39 - - - - 0.000000000000000000006171 98.0
BYD1_k127_6427099_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 513.0
BYD1_k127_6427099_40 Protein of unknown function (DUF2892) - - - 0.00000000000000000001407 92.0
BYD1_k127_6427099_41 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000001536 76.0
BYD1_k127_6427099_42 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000001565 72.0
BYD1_k127_6427099_43 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000001651 66.0
BYD1_k127_6427099_44 Domain of unknown function (DUF4249) - - - 0.0000002613 62.0
BYD1_k127_6427099_5 cytochrome C K02198 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002555 512.0
BYD1_k127_6427099_6 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 421.0
BYD1_k127_6427099_7 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000844 408.0
BYD1_k127_6427099_8 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 358.0
BYD1_k127_6427099_9 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 356.0
BYD1_k127_6515177_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1445.0
BYD1_k127_6515177_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 479.0
BYD1_k127_6515177_10 Protein of unknown function (DUF1648) - - - 0.00000000000000000000000000000000000000000000001093 176.0
BYD1_k127_6515177_11 Peptidase dimerisation domain K01258 - 3.4.11.4 0.00000000000000000000000000000000000000000008332 160.0
BYD1_k127_6515177_12 - - - - 0.00000000000000000000000000000000002647 144.0
BYD1_k127_6515177_13 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000548 136.0
BYD1_k127_6515177_14 Response regulator, receiver K03413,K10916 GO:0000155,GO:0000156,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0140096,GO:1901564 2.7.13.3 0.000000000000000000000009404 106.0
BYD1_k127_6515177_16 - - - - 0.000000000000000003337 95.0
BYD1_k127_6515177_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005297 424.0
BYD1_k127_6515177_3 AraC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 392.0
BYD1_k127_6515177_4 outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 351.0
BYD1_k127_6515177_5 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008281 314.0
BYD1_k127_6515177_6 GHKL domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009555 259.0
BYD1_k127_6515177_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004331 239.0
BYD1_k127_6515177_8 Protein of unknown function (DUF3108) - - - 0.0000000000000000000000000000000000000000000000000000000009645 211.0
BYD1_k127_6515177_9 - - - - 0.000000000000000000000000000000000000000000000000945 183.0
BYD1_k127_6642844_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.523e-296 921.0
BYD1_k127_6686220_0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 4.708e-240 749.0
BYD1_k127_6686220_1 regulator of chromosome condensation, RCC1 - - - 0.000000000000000000000000000000000000000000000000000000001805 227.0
BYD1_k127_6686220_2 TIGRFAM RHS repeat-associated core domain - - - 0.00000000000000001752 98.0
BYD1_k127_6688048_0 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 4.595e-298 922.0
BYD1_k127_6688048_1 PFAM Carbamoyltransferase K00612 - - 2.588e-290 899.0
BYD1_k127_6688048_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 338.0
BYD1_k127_6688048_3 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 308.0
BYD1_k127_6688048_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003229 253.0
BYD1_k127_6688048_5 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000002465 126.0
BYD1_k127_6688048_6 domain, Protein - - - 0.000000000000000007555 98.0
BYD1_k127_6688048_7 Pregnancy-associated plasma protein-A - - - 0.000007673 59.0
BYD1_k127_6693857_0 Ribonucleotide reductase, barrel domain K00525 - 1.17.4.1 0.0 1251.0
BYD1_k127_6693857_1 Domain of unknown function (DUF4476) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 311.0
BYD1_k127_6693857_2 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001011 262.0
BYD1_k127_6693857_3 23S rRNA-intervening sequence protein - - - 0.00000000000000000000000000000000001972 138.0
BYD1_k127_6698374_0 Glycosyl transferases group 1 - - - 0.0 1037.0
BYD1_k127_6698374_1 beta-1,4-mannooligosaccharide phosphorylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 608.0
BYD1_k127_6698374_10 metallopeptidase activity K01183 - 3.2.1.14 0.00000000000000000000000000000000000000000000000159 201.0
BYD1_k127_6698374_11 Protein of unknown function (DUF3795) - - - 0.00000000000000000000000000000000000008253 147.0
BYD1_k127_6698374_12 Photosynthesis system II assembly factor YCF48 - - - 0.000000000000000000000000001071 131.0
BYD1_k127_6698374_13 cellulose binding - - - 0.0000000000000003728 87.0
BYD1_k127_6698374_14 - - - - 0.00000000000001377 86.0
BYD1_k127_6698374_15 - - - - 0.00000000000003624 77.0
BYD1_k127_6698374_16 tripeptidyl-peptidase activity - - - 0.000000003217 71.0
BYD1_k127_6698374_17 extracellular matrix structural constituent - - - 0.000000004236 71.0
BYD1_k127_6698374_18 Leucine-rich repeat (LRR) protein - - - 0.000005253 60.0
BYD1_k127_6698374_2 Pfam:DUF377 K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 526.0
BYD1_k127_6698374_20 Pectate lyase - - - 0.0003055 52.0
BYD1_k127_6698374_3 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 489.0
BYD1_k127_6698374_4 peptidase activity, acting on L-amino acid peptides - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 415.0
BYD1_k127_6698374_5 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 334.0
BYD1_k127_6698374_6 - K21449 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 340.0
BYD1_k127_6698374_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002042 287.0
BYD1_k127_6698374_8 tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001018 260.0
BYD1_k127_6698374_9 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000004535 220.0
BYD1_k127_6833800_0 Belongs to the glycosyl hydrolase 13 family - - - 1.455e-245 782.0
BYD1_k127_6833800_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000002163 241.0
BYD1_k127_6833800_2 N-terminal 7TM region of histidine kinase - - - 0.00000000000000000000000000000000000000000000000000003437 209.0
BYD1_k127_6833800_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000001578 168.0
BYD1_k127_6833800_4 Universal stress protein family - - - 0.0000000000000000000000000000000009349 141.0
BYD1_k127_6843509_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1250.0
BYD1_k127_6843509_1 ATPase family associated with various cellular activities (AAA) K03696 - - 0.0 1171.0
BYD1_k127_6843509_10 Dihydroxyacetone kinase family K07030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 520.0
BYD1_k127_6843509_11 Uncharacterized protein family UPF0004 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008564 512.0
BYD1_k127_6843509_12 SigmaW regulon antibacterial - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005832 492.0
BYD1_k127_6843509_13 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 458.0
BYD1_k127_6843509_14 Protein of unknown function (DUF1343) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009016 441.0
BYD1_k127_6843509_15 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 428.0
BYD1_k127_6843509_16 ABC transporter permease K09808 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 370.0
BYD1_k127_6843509_17 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 353.0
BYD1_k127_6843509_18 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 355.0
BYD1_k127_6843509_19 Tyrosine recombinase XerC K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 355.0
BYD1_k127_6843509_2 PFAM Glycosyl Hydrolase - - - 0.0 1027.0
BYD1_k127_6843509_20 enterobactin catabolic process K07214 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 355.0
BYD1_k127_6843509_21 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 347.0
BYD1_k127_6843509_22 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 311.0
BYD1_k127_6843509_23 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009216 293.0
BYD1_k127_6843509_24 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000005216 243.0
BYD1_k127_6843509_25 CutC family K06201 GO:0000003,GO:0000041,GO:0002119,GO:0002164,GO:0003008,GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005829,GO:0006810,GO:0006811,GO:0006812,GO:0006825,GO:0007275,GO:0007600,GO:0007610,GO:0008150,GO:0009791,GO:0009987,GO:0010035,GO:0010038,GO:0016043,GO:0018991,GO:0019098,GO:0019233,GO:0022414,GO:0022607,GO:0030001,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0035264,GO:0040007,GO:0040025,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0046688,GO:0046872,GO:0046914,GO:0048513,GO:0048569,GO:0048589,GO:0048609,GO:0048731,GO:0048856,GO:0048878,GO:0050801,GO:0050877,GO:0050896,GO:0051179,GO:0051234,GO:0051259,GO:0051262,GO:0055065,GO:0055070,GO:0055076,GO:0055080,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0071840,GO:0098771 - 0.00000000000000000000000000000000000000000000000000000000000000008342 231.0
BYD1_k127_6843509_26 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000002533 183.0
BYD1_k127_6843509_27 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000002445 177.0
BYD1_k127_6843509_28 Nudix hydrolase - - - 0.00000000000000000000000000000000000000000006037 168.0
BYD1_k127_6843509_29 Protein of unknown function (DUF1573) - - - 0.0000000000000000000000000000000000000006991 154.0
BYD1_k127_6843509_3 CoA ligase K09181 - - 3.79e-304 945.0
BYD1_k127_6843509_30 OsmC-like protein K07397 - - 0.0000000000000000000000000000000000001908 145.0
BYD1_k127_6843509_31 metal-dependent phosphohydrolase HD sub domain - - - 0.0000000000000000000000000000003086 141.0
BYD1_k127_6843509_32 - - - - 0.000000000000000000000000000003459 125.0
BYD1_k127_6843509_33 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000000000001302 111.0
BYD1_k127_6843509_34 - - - - 0.000000000000000000000001443 110.0
BYD1_k127_6843509_35 Belongs to the ClpS family K06891 - - 0.000000000000000000001114 96.0
BYD1_k127_6843509_36 Domain of unknown function (DUF4295) - - - 0.0000000000000009978 77.0
BYD1_k127_6843509_37 NfeD-like C-terminal, partner-binding - - - 0.000000000000005283 81.0
BYD1_k127_6843509_38 Glyoxalase-like domain K06996 - - 0.0000000000002467 70.0
BYD1_k127_6843509_39 Transcriptional regulator - - - 0.000000000001055 69.0
BYD1_k127_6843509_4 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.028e-260 819.0
BYD1_k127_6843509_40 - - - - 0.000000000002068 74.0
BYD1_k127_6843509_41 ribosomal protein - - - 0.00000000004492 69.0
BYD1_k127_6843509_42 - - - - 0.000000002143 63.0
BYD1_k127_6843509_5 conserved protein - - - 5.681e-207 649.0
BYD1_k127_6843509_6 Aminotransferase class I and II K00812,K14260 - 2.6.1.1,2.6.1.2,2.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 604.0
BYD1_k127_6843509_7 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 579.0
BYD1_k127_6843509_8 Serine aminopeptidase, S33 K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005863 557.0
BYD1_k127_6843509_9 Peptidoglycan synthetase K01924,K02558 - 6.3.2.45,6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 552.0
BYD1_k127_6854671_0 RNA polymerase I subunit A N-terminus K03046 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2190.0
BYD1_k127_6854671_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 2016.0
BYD1_k127_6854671_10 Uncharacterized protein conserved in bacteria (DUF2179) - - - 0.000000000000000000000000000000000000000000000000000000000003839 213.0
BYD1_k127_6854671_11 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000000002657 198.0
BYD1_k127_6854671_12 Protein of unknown function (DUF3467) - - - 0.00000000000000000000000000000000000000001446 156.0
BYD1_k127_6854671_13 - - - - 0.000000000000000003471 87.0
BYD1_k127_6854671_14 SecE/Sec61-gamma subunits of protein translocation complex K03073 - - 0.000000000000002388 77.0
BYD1_k127_6854671_15 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000008929 53.0
BYD1_k127_6854671_2 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.74e-203 636.0
BYD1_k127_6854671_3 Domain of Unknown Function (DUF349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 511.0
BYD1_k127_6854671_4 PFAM Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 506.0
BYD1_k127_6854671_5 Cys/Met metabolism PLP-dependent enzyme K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 466.0
BYD1_k127_6854671_6 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 351.0
BYD1_k127_6854671_7 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001885 277.0
BYD1_k127_6854671_8 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000001994 249.0
BYD1_k127_6854671_9 Ribosomal protein L10 K02864 - - 0.000000000000000000000000000000000000000000000000000000000001685 213.0
BYD1_k127_6857025_0 PFAM MotA TolQ ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 316.0
BYD1_k127_6857025_1 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001688 243.0
BYD1_k127_6857025_2 Biopolymer transport protein, ExbD K03559 - - 0.00000000000000000000000000000000000000000000000000861 184.0
BYD1_k127_6857025_3 exonuclease of the beta-lactamase fold involved in RNA processing K07576 - - 0.0000000000000000000000000004825 115.0
BYD1_k127_6874093_0 PFAM Family of - - - 1.453e-283 934.0
BYD1_k127_6874093_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 1.05e-265 834.0
BYD1_k127_6874093_10 HAD-hyrolase-like K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000009005 227.0
BYD1_k127_6874093_11 Methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000001092 205.0
BYD1_k127_6874093_12 Belongs to the CDS family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000003922 200.0
BYD1_k127_6874093_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000004056 194.0
BYD1_k127_6874093_14 PFAM Uncharacterised ACR, YkgG family COG1556 K00782 - - 0.0000000000000000000000000000000000000000000601 168.0
BYD1_k127_6874093_15 biotin acetyl-CoA-carboxylase ligase K03524 - 6.3.4.15 0.00000000000000000000000000000000000000004094 161.0
BYD1_k127_6874093_16 NUDIX domain - - - 0.00000000000000000000000000000000000001705 153.0
BYD1_k127_6874093_17 Restriction endonuclease, type I, EcoRI, R subunit Type III, Res subunit, N-terminal - - - 0.00000000000000000000000000000000000003135 148.0
BYD1_k127_6874093_18 COG NOG19144 non supervised orthologous group - - - 0.0000000000000000000000000000000000008376 147.0
BYD1_k127_6874093_19 - - - - 0.000000000000000000000000000000000001863 156.0
BYD1_k127_6874093_2 surface antigen - - - 5.253e-206 665.0
BYD1_k127_6874093_20 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000194 136.0
BYD1_k127_6874093_21 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000009015 100.0
BYD1_k127_6874093_22 Tetratricopeptide repeat - - - 0.00000000000002986 83.0
BYD1_k127_6874093_23 - - - - 0.000000000003076 72.0
BYD1_k127_6874093_24 Putative prokaryotic signal transducing protein - - - 0.00000003393 57.0
BYD1_k127_6874093_3 Long-chain fatty acid--CoA ligase K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 563.0
BYD1_k127_6874093_4 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004416 528.0
BYD1_k127_6874093_5 Phosphorylase superfamily K01241 - 3.2.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 409.0
BYD1_k127_6874093_6 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 348.0
BYD1_k127_6874093_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762,K13421 - 2.4.2.10,4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002989 273.0
BYD1_k127_6874093_8 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005612 264.0
BYD1_k127_6874093_9 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000001743 250.0
BYD1_k127_6933126_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 1.829e-205 650.0
BYD1_k127_6933126_1 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001711 497.0
BYD1_k127_6933126_10 Subtilase family - - - 0.000000000001899 80.0
BYD1_k127_6933126_11 Subtilase family - - - 0.00000001106 64.0
BYD1_k127_6933126_12 - - - - 0.0004119 48.0
BYD1_k127_6933126_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 377.0
BYD1_k127_6933126_3 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 307.0
BYD1_k127_6933126_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 283.0
BYD1_k127_6933126_5 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003834 260.0
BYD1_k127_6933126_6 phospholipase Carboxylesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000001595 238.0
BYD1_k127_6933126_7 acid phosphatase activity K01727 - 4.2.2.1 0.000000000000000000000000000000000000000000000000000000004249 220.0
BYD1_k127_6933126_8 - - - - 0.000000000000000000000000000000000008338 143.0
BYD1_k127_6933126_9 gtp-binding protein typa K06207 - - 0.00000000000000000000000000000003839 126.0
BYD1_k127_7017547_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775,K01929 - 5.1.1.1,6.3.2.10 1.89e-270 856.0
BYD1_k127_7017547_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 578.0
BYD1_k127_7017547_10 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008828 334.0
BYD1_k127_7017547_11 Coenzyme F420 hydrogenase dehydrogenase, beta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 337.0
BYD1_k127_7017547_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 336.0
BYD1_k127_7017547_13 GTP cyclohydrolase K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 316.0
BYD1_k127_7017547_14 Aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003502 318.0
BYD1_k127_7017547_15 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000001285 215.0
BYD1_k127_7017547_16 metallophosphoesterase K07096 - - 0.0000000000000000000000000000000000000000000000000000000000001879 221.0
BYD1_k127_7017547_17 6-pyruvoyl tetrahydropterin synthase K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000000000000000000000000000002707 205.0
BYD1_k127_7017547_18 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000727 200.0
BYD1_k127_7017547_19 HIT domain K02503 - - 0.000000000000000000000000000000000000000000000000006833 183.0
BYD1_k127_7017547_2 PFAM DegT DnrJ EryC1 StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 542.0
BYD1_k127_7017547_20 - - - - 0.0000000000000000000000000000000000000005308 159.0
BYD1_k127_7017547_21 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000008916 126.0
BYD1_k127_7017547_22 lysyltransferase activity K07027 - - 0.000000000000001174 88.0
BYD1_k127_7017547_23 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.00000001359 61.0
BYD1_k127_7017547_24 cellulose binding - - - 0.000004084 56.0
BYD1_k127_7017547_25 Endonuclease Exonuclease Phosphatase - - - 0.00003361 53.0
BYD1_k127_7017547_26 Methionine biosynthesis protein MetW - - - 0.0001701 52.0
BYD1_k127_7017547_3 PFAM Aldo keto reductase family K19265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 478.0
BYD1_k127_7017547_4 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 467.0
BYD1_k127_7017547_5 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 455.0
BYD1_k127_7017547_6 Belongs to the PdxA family K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 433.0
BYD1_k127_7017547_7 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 424.0
BYD1_k127_7017547_8 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 389.0
BYD1_k127_7017547_9 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 330.0
BYD1_k127_7116655_0 amine dehydrogenase activity K02035 - - 0.00071 53.0
BYD1_k127_7116655_1 amine dehydrogenase activity - - - 0.0009361 52.0
BYD1_k127_7126307_0 Psort location OuterMembrane, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001189 265.0
BYD1_k127_7126307_1 TIGR02453 family - - - 0.00000000000000000000000000000000000000000000000000000000000002806 221.0
BYD1_k127_7126307_2 photosystem II stabilization - - - 0.00000000000000000000000000000000000000000000000005457 188.0
BYD1_k127_7126307_3 PFAM Peptidase family M3 K01284 - 3.4.15.5 0.0000000000000000000000000000000000000000000000001452 179.0
BYD1_k127_7149992_0 PFAM sulfatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 398.0
BYD1_k127_7149992_1 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.00000000000000004649 83.0
BYD1_k127_7149992_2 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.000000000000003341 83.0
BYD1_k127_7437725_0 Alpha-L-fucosidase K01206 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 578.0
BYD1_k127_7437725_1 Domain of unknown function (DUF4838) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 498.0
BYD1_k127_7437725_2 Protein of unknown function (DUF819) - - - 0.0000000000000000000000000000000000000000000000000001279 198.0
BYD1_k127_7437725_3 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000003845 130.0
BYD1_k127_7487408_0 CoA carboxylase activity K01966 - 2.1.3.15,6.4.1.3 4.06e-286 884.0
BYD1_k127_7487408_1 Motility related/secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007234 616.0
BYD1_k127_7487408_10 Peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.00000000000000000000000000000000000007733 147.0
BYD1_k127_7487408_11 Modulates RecA activity K03565 - - 0.0000000000000000000000000003291 119.0
BYD1_k127_7487408_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 456.0
BYD1_k127_7487408_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005188 450.0
BYD1_k127_7487408_4 Na+-transporting oxaloacetate decarboxylase beta subunit K01572 - 4.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 368.0
BYD1_k127_7487408_5 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002003 288.0
BYD1_k127_7487408_6 Oxaloacetate decarboxylase, gamma chain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002028 260.0
BYD1_k127_7487408_7 Glyoxalase-like domain K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000009823 226.0
BYD1_k127_7487408_8 CoA carboxylase activity K01965 - 6.4.1.3 0.0000000000000000000000000000000000000000000000000000000001451 206.0
BYD1_k127_7487408_9 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000004149 204.0
BYD1_k127_750562_0 PFAM SPFH domain Band 7 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 349.0
BYD1_k127_750562_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 313.0
BYD1_k127_750562_2 YceI-like domain - - - 0.0000000000000000000000000000000000000000000000000000000004072 208.0
BYD1_k127_7526982_0 Pyridoxal-dependent decarboxylase, C-terminal sheet domain K01585 - 4.1.1.19 1.595e-254 790.0
BYD1_k127_7526982_1 Deoxyhypusine synthase K00809 - 2.5.1.46 1.639e-199 623.0
BYD1_k127_7526982_2 Belongs to the arginase family K01476,K01480 - 3.5.3.1,3.5.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 352.0
BYD1_k127_7526982_3 - - - - 0.00000000000000000000000000000229 131.0
BYD1_k127_7526982_4 MacB-like periplasmic core domain K02004 - - 0.000005702 51.0
BYD1_k127_7526982_5 M6 family metalloprotease domain protein - - - 0.00007244 48.0
BYD1_k127_757151_0 COG0076 Glutamate decarboxylase and related PLP-dependent K01593 - 4.1.1.105,4.1.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 589.0
BYD1_k127_757151_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 552.0
BYD1_k127_757151_2 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000001239 207.0
BYD1_k127_757151_3 cell adhesion - - - 0.0000000000000000000000000000000000000000000000006942 191.0
BYD1_k127_757151_4 Glycogen recognition site of AMP-activated protein kinase - - - 0.000000000000000000000000000000000000000000000001228 192.0
BYD1_k127_757151_5 - - - - 0.0000000000000000000000000000000000003251 153.0
BYD1_k127_757151_6 Belongs to the P-Pant transferase superfamily K06133 - - 0.00000000000000000000000000000000002642 143.0
BYD1_k127_7593330_0 1-pyrroline-5-carboxylate dehydrogenase K00294,K13821 - 1.2.1.88,1.5.5.2 3.369e-246 770.0
BYD1_k127_7593330_1 Belongs to the aldehyde dehydrogenase family K00128,K13821 - 1.2.1.3,1.2.1.88,1.5.5.2 8.97e-239 747.0
BYD1_k127_7593330_10 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 360.0
BYD1_k127_7593330_11 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003924 322.0
BYD1_k127_7593330_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 288.0
BYD1_k127_7593330_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002728 280.0
BYD1_k127_7593330_14 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000115 279.0
BYD1_k127_7593330_15 TIGRFAM tungstate ABC transporter binding protein WtpA K15495 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002174 274.0
BYD1_k127_7593330_16 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000218 259.0
BYD1_k127_7593330_17 ATPase activity K02017,K15497 - 3.6.3.29,3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000002316 250.0
BYD1_k127_7593330_18 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000005334 245.0
BYD1_k127_7593330_19 Binding-protein-dependent transport system inner membrane component K15496 - - 0.000000000000000000000000000000000000000000000000000000000000000001522 235.0
BYD1_k127_7593330_2 Membrane protein involved in D-alanine export - - - 1.051e-225 707.0
BYD1_k127_7593330_20 short-chain dehydrogenase K16216 - 1.1.1.320 0.0000000000000000000000000000000000000000000000000000000001659 212.0
BYD1_k127_7593330_21 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000004244 194.0
BYD1_k127_7593330_22 metallopeptidase activity K01179,K01406,K03641,K07004 - 3.2.1.4,3.4.24.40 0.0000000000000000000000000000000000000000000000003484 202.0
BYD1_k127_7593330_23 Peptidogalycan biosysnthesis/recognition - - - 0.000000000000000000000000000000000000000000002627 177.0
BYD1_k127_7593330_24 Oligosaccharide biosynthesis protein Alg14 like - - - 0.0000000000000000000000000000000000000000003155 163.0
BYD1_k127_7593330_25 Polysaccharide biosynthesis/export protein K01991 - - 0.000000000000000000000000000000000000000007253 163.0
BYD1_k127_7593330_26 COG0438 Glycosyltransferase K07011 - - 0.00000000000000000000000000000000000000000991 168.0
BYD1_k127_7593330_27 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.00000000000000000000000000000000000000015 151.0
BYD1_k127_7593330_28 Glycosyltransferase family 28 - - - 0.000000000000000000000000000000000000003688 151.0
BYD1_k127_7593330_29 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000001634 147.0
BYD1_k127_7593330_3 RmlD substrate binding domain K01711 - 4.2.1.47 1.995e-202 634.0
BYD1_k127_7593330_30 - - - - 0.00000000000000000000000000000001559 135.0
BYD1_k127_7593330_32 - - - - 0.00000000000000000000002024 113.0
BYD1_k127_7593330_33 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000005486 110.0
BYD1_k127_7593330_34 - - - - 0.0000000000000000227 90.0
BYD1_k127_7593330_35 asparagine synthase K01953 - 6.3.5.4 0.0000001051 65.0
BYD1_k127_7593330_36 Periplasmic copper-binding protein (NosD) - - - 0.00001056 59.0
BYD1_k127_7593330_37 Pkd domain containing protein - - - 0.00003178 58.0
BYD1_k127_7593330_38 solute binding protein K02035 - - 0.0002877 55.0
BYD1_k127_7593330_4 Leucine-rich repeat (LRR) protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 619.0
BYD1_k127_7593330_5 TIGRFAM capsular exopolysaccharide family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003643 530.0
BYD1_k127_7593330_6 GDP-mannose 4,6 dehydratase K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008121 479.0
BYD1_k127_7593330_7 PFAM DegT DnrJ EryC1 StrS aminotransferase K13010 - 2.6.1.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 478.0
BYD1_k127_7593330_8 CoA-binding domain K13012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 411.0
BYD1_k127_7593330_9 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 378.0
BYD1_k127_7604848_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1458.0
BYD1_k127_7604848_1 chelatase, subunit chli K07391 - - 5.116e-232 727.0
BYD1_k127_7604848_10 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000001318 231.0
BYD1_k127_7604848_11 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003601 234.0
BYD1_k127_7604848_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000004201 221.0
BYD1_k127_7604848_13 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000004284 203.0
BYD1_k127_7604848_14 methylated-DNA-[protein]-cysteine S-methyltransferase activity K07034,K07443 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0005488,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0032131,GO:0032132,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000002592 160.0
BYD1_k127_7604848_15 Protein of unknown function (DUF2795) - - - 0.0000000000000000000000000000000000000003233 149.0
BYD1_k127_7604848_16 Sporulation related domain - - - 0.00000000000000000000000000000000000297 150.0
BYD1_k127_7604848_17 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000006486 129.0
BYD1_k127_7604848_18 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000003021 121.0
BYD1_k127_7604848_19 NifU domain protein - - - 0.0000000000000000000000006103 106.0
BYD1_k127_7604848_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 2.689e-214 678.0
BYD1_k127_7604848_20 Fe-S protein K06938 - - 0.000000001694 61.0
BYD1_k127_7604848_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005647 456.0
BYD1_k127_7604848_4 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005651 346.0
BYD1_k127_7604848_5 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 347.0
BYD1_k127_7604848_6 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 319.0
BYD1_k127_7604848_7 peptidase activity, acting on L-amino acid peptides K01337,K05994,K20276 - 3.4.11.10,3.4.21.50 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 332.0
BYD1_k127_7604848_8 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002785 306.0
BYD1_k127_7604848_9 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000006896 249.0
BYD1_k127_7605228_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000001785 232.0
BYD1_k127_7605228_1 M6 family metalloprotease domain protein - - - 0.000000000000000000000000000573 134.0
BYD1_k127_7605228_2 - - - - 0.0000000000000000001002 106.0
BYD1_k127_7605228_3 C-terminal domain of CHU protein family - - - 0.0000000000002134 85.0
BYD1_k127_7605228_4 PFAM Tetratricopeptide repeat - - - 0.00000005612 65.0
BYD1_k127_7605228_5 Spondin_N - - - 0.00006608 51.0
BYD1_k127_7629772_0 TonB-dependent receptor plug domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 568.0
BYD1_k127_7629772_1 Transporter K14445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006507 532.0
BYD1_k127_7629772_2 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006311 414.0
BYD1_k127_7629772_3 Glycosyl hydrolases family 16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 359.0
BYD1_k127_7695958_0 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 389.0
BYD1_k127_7695958_1 Domain of unknown function (DUF4249) - - - 0.000000000000000000000000000000000000000000000000000000000000000001326 241.0
BYD1_k127_7695958_2 Large extracellular alpha-helical protein - - - 0.000000000000000000000000000000000000000000000000000000000000005135 238.0
BYD1_k127_7695958_4 - - - - 0.00001206 47.0
BYD1_k127_7704196_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01006,K01007 - 2.7.9.1,2.7.9.2 2.402e-266 852.0
BYD1_k127_7704196_1 Polysaccharide biosynthesis C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 529.0
BYD1_k127_7704196_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002932 441.0
BYD1_k127_7704196_3 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000153 250.0
BYD1_k127_7704196_4 Domain of unknown function (DUF4382) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001394 239.0
BYD1_k127_7843214_0 Collagenase K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 413.0
BYD1_k127_7843214_2 Putative prokaryotic signal transducing protein - - - 0.00004279 51.0
BYD1_k127_7843214_3 Beta-lactamase - - - 0.0001269 53.0
BYD1_k127_7851407_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 5.426e-269 841.0
BYD1_k127_7851407_1 Glycosyltransferase like family 2 - - - 4.34e-202 638.0
BYD1_k127_7851407_10 Acetyltransferase (GNAT) family - - - 0.0000000000000000000000000000000000000000235 156.0
BYD1_k127_7851407_11 Copper binding proteins, plastocyanin/azurin family - - - 0.00000000000000000000000000000000001836 142.0
BYD1_k127_7851407_13 - - - - 0.000000000000000000000001746 120.0
BYD1_k127_7851407_14 Sodium:dicarboxylate symporter family - - - 0.000004785 48.0
BYD1_k127_7851407_2 Zn_pept - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 606.0
BYD1_k127_7851407_3 membrane protein involved in D-alanine export K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 550.0
BYD1_k127_7851407_4 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 401.0
BYD1_k127_7851407_5 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 357.0
BYD1_k127_7851407_6 PFAM C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000487 323.0
BYD1_k127_7851407_7 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 296.0
BYD1_k127_7851407_8 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000002714 248.0
BYD1_k127_7851407_9 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000001553 208.0
BYD1_k127_7874795_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 5.942e-278 865.0
BYD1_k127_7874795_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 490.0
BYD1_k127_7874795_2 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000005234 194.0
BYD1_k127_787961_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1278.0
BYD1_k127_787961_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1223.0
BYD1_k127_787961_10 Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine K01760,K01761 - 4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004269 588.0
BYD1_k127_787961_11 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 571.0
BYD1_k127_787961_12 PFAM beta-lactamase domain protein K22405 - 1.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 556.0
BYD1_k127_787961_13 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 516.0
BYD1_k127_787961_14 Peptidase S8 and S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 504.0
BYD1_k127_787961_15 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009075 492.0
BYD1_k127_787961_16 Glycoprotease family K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 477.0
BYD1_k127_787961_17 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 492.0
BYD1_k127_787961_18 Aerotolerance regulator N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 460.0
BYD1_k127_787961_19 PFAM Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008336 424.0
BYD1_k127_787961_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0 1120.0
BYD1_k127_787961_20 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006653 357.0
BYD1_k127_787961_21 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 349.0
BYD1_k127_787961_22 PFAM FG-GAP repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 344.0
BYD1_k127_787961_23 Transglycosylase SLT domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 321.0
BYD1_k127_787961_24 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005732 274.0
BYD1_k127_787961_25 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001993 257.0
BYD1_k127_787961_26 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000009478 246.0
BYD1_k127_787961_27 COG1512 Beta-propeller domains of methanol dehydrogenase type K06872 - - 0.0000000000000000000000000000000000000000000000000000000000000000004532 239.0
BYD1_k127_787961_28 PFAM Uncharacterised ACR, COG1259 K08999 - - 0.0000000000000000000000000000000000000000000000000009121 189.0
BYD1_k127_787961_29 TPM domain - - - 0.000000000000000000000000000000000000000000000000455 179.0
BYD1_k127_787961_3 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0 1103.0
BYD1_k127_787961_30 helix_turn_helix ASNC type K03718 - - 0.000000000000000000000000000000000000000000000133 172.0
BYD1_k127_787961_31 Dihydrofolate reductase K00287 - 1.5.1.3 0.00000000000000000000000000000000000000000003352 168.0
BYD1_k127_787961_33 gag-polyprotein putative aspartyl protease - - - 0.00000000000000007564 86.0
BYD1_k127_787961_34 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000001169 62.0
BYD1_k127_787961_35 - - - - 0.00000003252 56.0
BYD1_k127_787961_36 self proteolysis - - - 0.00004011 56.0
BYD1_k127_787961_4 Belongs to the type II topoisomerase GyrA ParC subunit family K02621 - - 0.0 1060.0
BYD1_k127_787961_5 Psort location Cytoplasmic, score K00027,K00029 - 1.1.1.38,1.1.1.40 3.934e-305 953.0
BYD1_k127_787961_6 Hsp90 protein K04079 - - 3.944e-246 775.0
BYD1_k127_787961_7 L-lysine 6-monooxygenase (NADPH-requiring) K00382 - 1.8.1.4 2.67e-237 739.0
BYD1_k127_787961_8 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase K00262 GO:0005575,GO:0005623,GO:0009986,GO:0044464 1.4.1.4 4.763e-222 694.0
BYD1_k127_787961_9 Psort location OuterMembrane, score 9.49 - - - 6.413e-198 670.0
BYD1_k127_7916394_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 429.0
BYD1_k127_7916394_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005681 284.0
BYD1_k127_7916394_2 gluconolactonase activity K01179,K01218 - 3.2.1.4,3.2.1.78 0.0006637 52.0
BYD1_k127_7932155_0 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 381.0
BYD1_k127_7932155_1 Acyl-ACP thioesterase K01071 - 3.1.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001213 276.0
BYD1_k127_7932155_2 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000004517 231.0
BYD1_k127_7932155_3 Protein of unknown function (DUF3037) - - - 0.00000000000000000000000000000000000000000000000000004417 190.0
BYD1_k127_7932155_4 SMP-30/Gluconolaconase/LRE-like region - - - 0.000000000000000000000000000000000000000002219 167.0
BYD1_k127_7932155_5 chlorophyll binding - - - 0.00000000000004104 83.0
BYD1_k127_7932155_6 precorrin-4 C11-methyltransferase activity - - - 0.0000004233 61.0
BYD1_k127_7932155_7 PKD domain - - - 0.00003987 55.0
BYD1_k127_8039436_0 Glycosyl hydrolase family 20, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003536 340.0
BYD1_k127_8039436_1 by modhmm K03655 - 3.6.4.12 0.0000000000000003271 92.0
BYD1_k127_8039436_2 alkaline phosphatase - - - 0.00002399 50.0
BYD1_k127_8074058_0 Belongs to the peptidase S8 family - - - 6.971e-199 665.0
BYD1_k127_8074058_1 COG3893 Inactivated superfamily I helicase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002367 550.0
BYD1_k127_8074058_10 - - - - 0.00000000000000000005351 94.0
BYD1_k127_8074058_11 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000007324 87.0
BYD1_k127_8074058_12 RHS repeat-associated core domain protein - - - 0.00000001178 65.0
BYD1_k127_8074058_13 PKD domain - - - 0.0000001996 56.0
BYD1_k127_8074058_2 P-loop ATPase protein family K06958,K07102 GO:0000166,GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005975,GO:0006022,GO:0006040,GO:0006082,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0017076,GO:0019200,GO:0019752,GO:0030203,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046835,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 492.0
BYD1_k127_8074058_3 Nucleotidyl transferase K00966,K00973 - 2.7.7.13,2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000003956 248.0
BYD1_k127_8074058_4 Alpha-2-Macroglobulin K06894 - - 0.0000000000000000000000000000000000000000000000000000004025 198.0
BYD1_k127_8074058_5 Ferritin-like domain - - - 0.0000000000000000000000000000000000001615 146.0
BYD1_k127_8074058_6 - - - - 0.000000000000000000000000000000000009895 153.0
BYD1_k127_8074058_7 - - - - 0.000000000000000000000000001916 127.0
BYD1_k127_8074058_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000000002026 109.0
BYD1_k127_8074058_9 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.000000000000000000001301 101.0
BYD1_k127_8098795_0 Motility related/secretion protein - - - 0.0 1277.0
BYD1_k127_8193769_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 520.0
BYD1_k127_8193769_1 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 394.0
BYD1_k127_8193769_2 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 302.0
BYD1_k127_8193769_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 298.0
BYD1_k127_8193769_4 DoxX family - - - 0.00000000000000000000000000000000000000000004447 170.0
BYD1_k127_8222827_0 TonB-linked outer membrane protein, SusC RagA family - - - 1.692e-317 999.0
BYD1_k127_8222827_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 1.288e-236 737.0
BYD1_k127_8222827_10 PFAM PKD domain - - - 0.00000007186 65.0
BYD1_k127_8222827_11 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.000002943 53.0
BYD1_k127_8222827_2 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 3.104e-217 683.0
BYD1_k127_8222827_3 Belongs to the glycosyl hydrolase 30 family K01201 - 3.2.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006233 520.0
BYD1_k127_8222827_4 Pfam:SusD K21572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 506.0
BYD1_k127_8222827_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003506 346.0
BYD1_k127_8222827_6 Glycosyl hydrolases family 16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000011 271.0
BYD1_k127_8222827_7 PFAM NAD dependent epimerase dehydratase family K00091 - 1.1.1.219 0.0000000000000000000000000000000000000000000000000000001234 206.0
BYD1_k127_8222827_8 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000001599 126.0
BYD1_k127_8222827_9 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000004964 102.0
BYD1_k127_8342917_0 Pfam Alpha-L-fucosidase K01206 - 3.2.1.51 2.616e-231 724.0
BYD1_k127_8342917_1 HAD-superfamily hydrolase subfamily IA, variant 3 K20866 - 3.1.3.10 0.0000000000000000000000000000000000000000001322 166.0
BYD1_k127_8342917_2 Alpha-1,2-mannosidase - - - 0.0000000000000000000000000000000004064 136.0
BYD1_k127_8342917_3 - - - - 0.0000000005399 66.0
BYD1_k127_8418595_0 heat shock protein binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 595.0
BYD1_k127_8418595_1 heat shock protein binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004786 595.0
BYD1_k127_8418595_10 Chitinase class I K20547 - 3.2.1.14 0.0000344 56.0
BYD1_k127_8418595_2 4fe-4S ferredoxin, iron-sulfur binding domain protein K00384,K21567 - 1.18.1.2,1.19.1.1,1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008398 546.0
BYD1_k127_8418595_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 411.0
BYD1_k127_8418595_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 420.0
BYD1_k127_8418595_5 fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 363.0
BYD1_k127_8418595_6 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 322.0
BYD1_k127_8418595_7 ferredoxin-NADP+ reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002098 251.0
BYD1_k127_8434164_0 Protein of unknown function (DUF2723) - - - 7.64e-314 990.0
BYD1_k127_8434164_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.453e-311 987.0
BYD1_k127_8434164_10 RnfC Barrel sandwich hybrid domain K03615 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 603.0
BYD1_k127_8434164_11 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K16363 - 3.5.1.108,4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 594.0
BYD1_k127_8434164_12 Carbohydrate family 9 binding domain-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 595.0
BYD1_k127_8434164_13 Amidohydrolase family K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 527.0
BYD1_k127_8434164_14 phosphohydrolase K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 491.0
BYD1_k127_8434164_15 DEAD DEAH box helicase domain protein K05591 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006552 488.0
BYD1_k127_8434164_16 ABC-type uncharacterized transport system K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 486.0
BYD1_k127_8434164_17 NmrA-like family K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005359 466.0
BYD1_k127_8434164_18 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 467.0
BYD1_k127_8434164_19 50S ribosome-binding GTPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 467.0
BYD1_k127_8434164_2 Glutamate formiminotransferase K00603,K13990 - 2.1.2.5,4.3.1.4 9.572e-261 813.0
BYD1_k127_8434164_20 2-nitropropane dioxygenase K02371 - 1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 459.0
BYD1_k127_8434164_21 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009806 445.0
BYD1_k127_8434164_22 alanine dehydrogenase K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 437.0
BYD1_k127_8434164_23 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 420.0
BYD1_k127_8434164_24 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 423.0
BYD1_k127_8434164_25 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004207 404.0
BYD1_k127_8434164_26 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000964 415.0
BYD1_k127_8434164_27 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009919 409.0
BYD1_k127_8434164_28 DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 406.0
BYD1_k127_8434164_29 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 402.0
BYD1_k127_8434164_3 TonB-dependent receptor - - - 1.257e-240 771.0
BYD1_k127_8434164_30 Transporter associated domain K03699 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 403.0
BYD1_k127_8434164_31 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 395.0
BYD1_k127_8434164_32 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 388.0
BYD1_k127_8434164_33 Proline dehydrogenase K00318 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 389.0
BYD1_k127_8434164_34 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009577 378.0
BYD1_k127_8434164_35 glucosamine N-acyltransferase K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 373.0
BYD1_k127_8434164_36 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 370.0
BYD1_k127_8434164_37 Putative Fe-S cluster K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 358.0
BYD1_k127_8434164_38 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006471 357.0
BYD1_k127_8434164_39 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 328.0
BYD1_k127_8434164_4 Carboxypeptidase regulatory-like domain - - - 6.09e-233 744.0
BYD1_k127_8434164_40 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 324.0
BYD1_k127_8434164_41 atp-binding protein K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007228 316.0
BYD1_k127_8434164_42 Chain length determinant protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 313.0
BYD1_k127_8434164_43 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001464 304.0
BYD1_k127_8434164_44 lipoprotein biosynthetic process K03438,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0008961,GO:0009249,GO:0009987,GO:0010467,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0051604,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 308.0
BYD1_k127_8434164_45 Fe-S oxidoreductase K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 301.0
BYD1_k127_8434164_46 TIGRFAM gliding motility-associated ABC transporter permease protein GldF K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 297.0
BYD1_k127_8434164_47 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 317.0
BYD1_k127_8434164_48 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 282.0
BYD1_k127_8434164_49 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006723 256.0
BYD1_k127_8434164_5 domain protein - - - 8.471e-216 681.0
BYD1_k127_8434164_50 PFAM Asp Glu hydantoin racemase K01779 - 5.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000182 256.0
BYD1_k127_8434164_51 MarC family integral membrane protein K05595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001357 253.0
BYD1_k127_8434164_52 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000135 246.0
BYD1_k127_8434164_53 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007684 253.0
BYD1_k127_8434164_54 Iron/manganese superoxide dismutases, alpha-hairpin domain K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000001598 248.0
BYD1_k127_8434164_55 bacterial-type flagellum-dependent cell motility K13276 - - 0.000000000000000000000000000000000000000000000000000000000000000000003191 261.0
BYD1_k127_8434164_56 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000005017 241.0
BYD1_k127_8434164_57 bacterial-type flagellum-dependent cell motility K13276 - - 0.00000000000000000000000000000000000000000000000000000000000000000001774 258.0
BYD1_k127_8434164_58 Pfam S-adenosyl-l-methionine hydroxide adenosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000222 241.0
BYD1_k127_8434164_59 LUD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003099 237.0
BYD1_k127_8434164_6 Isocitrate/isopropylmalate dehydrogenase K00031 - 1.1.1.42 2.6e-210 659.0
BYD1_k127_8434164_60 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002353 224.0
BYD1_k127_8434164_61 PFAM ABC transporter K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000002889 215.0
BYD1_k127_8434164_62 protein involved in exopolysaccharide biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000007387 214.0
BYD1_k127_8434164_63 gluconolactonase activity - - - 0.0000000000000000000000000000000000000000000000000000001831 220.0
BYD1_k127_8434164_64 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000003192 190.0
BYD1_k127_8434164_65 COGs COG1392 Phosphate transport regulator (distant homolog of PhoU) K07220 - - 0.0000000000000000000000000000000000000000000000000008315 190.0
BYD1_k127_8434164_66 Secondary thiamine-phosphate synthase enzyme - - - 0.0000000000000000000000000000000000000000000000001576 181.0
BYD1_k127_8434164_67 Immunoglobulin-like repeats containing protein domain K20276 - - 0.0000000000000000000000000000000000000000000000008148 201.0
BYD1_k127_8434164_68 D-Tyr-tRNA(Tyr) deacylase K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000008579 178.0
BYD1_k127_8434164_69 6-phosphogluconolactonase activity - - - 0.000000000000000000000000000000000000000000000002278 189.0
BYD1_k127_8434164_7 Belongs to the citrate synthase family K01647 - 2.3.3.1 1.767e-208 655.0
BYD1_k127_8434164_70 FMN binding K03612 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000002735 181.0
BYD1_k127_8434164_71 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.00000000000000000000000000000000000000335 150.0
BYD1_k127_8434164_72 - - - - 0.0000000000000000000000000000000000004044 153.0
BYD1_k127_8434164_73 OsmC-like protein - - - 0.0000000000000000000000000000000007351 135.0
BYD1_k127_8434164_74 Belongs to the bacterial ribosomal protein bL28 family K02902 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000001425 117.0
BYD1_k127_8434164_75 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000008575 115.0
BYD1_k127_8434164_76 Protein of unknown function, DUF393 - - - 0.0000000000000000000002441 101.0
BYD1_k127_8434164_77 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000009765 102.0
BYD1_k127_8434164_78 LytTr DNA-binding domain - - - 0.000000000000000000005373 104.0
BYD1_k127_8434164_79 Positive regulator of sigma(E), RseC MucC K03803 - - 0.0000000000000007214 83.0
BYD1_k127_8434164_8 Adenylosuccinate lyase C-terminal K01756 - 4.3.2.2 3.083e-201 634.0
BYD1_k127_8434164_80 Fibronectin type 3 domain K01406,K20276 - 3.4.24.40 0.000000000000002866 91.0
BYD1_k127_8434164_81 peptidase C11 clostripain - - - 0.0000000000042 76.0
BYD1_k127_8434164_85 repeat protein - - - 0.0002123 55.0
BYD1_k127_8434164_86 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K07093 - - 0.0008694 53.0
BYD1_k127_8434164_9 Participates in both transcription termination and antitermination K02600 - - 8.887e-197 619.0
BYD1_k127_8563379_0 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 417.0
BYD1_k127_8563379_1 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000002075 88.0
BYD1_k127_8601619_0 Multicopper oxidase - - - 2.391e-314 978.0
BYD1_k127_8601619_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000004491 173.0
BYD1_k127_8601619_2 Stress responsive A/B Barrel Domain - - - 0.00000000000000000000000000000000005499 136.0
BYD1_k127_8601619_3 - - - - 0.00000000000000001398 90.0
BYD1_k127_8601619_4 PFAM Receptor L domain - - - 0.00000000001291 76.0
BYD1_k127_8601619_5 - - - - 0.000001295 59.0
BYD1_k127_8641972_0 COG5337 Spore coat assembly protein K06330 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 447.0
BYD1_k127_8641972_1 SGNH hydrolase-like domain, acetyltransferase AlgX - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001088 258.0
BYD1_k127_8641972_2 Glycosyl hydrolase family 20, domain 2 - - - 0.00000000000000000000000000000000000000000000000000000008916 208.0
BYD1_k127_8641972_3 Evidence 5 No homology to any previously reported sequences - - - 0.0000000000000000000000000000000000000000001757 184.0
BYD1_k127_8641972_4 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000001265 138.0
BYD1_k127_8641972_5 Belongs to the peptidase C1 family - - - 0.000000000000000000000000000000003683 150.0
BYD1_k127_8641972_6 family 16 - - - 0.00000000000000000000000000000006349 136.0
BYD1_k127_8641972_7 - - - - 0.00000000000000000000001987 105.0
BYD1_k127_8641972_8 Immune inhibitor A peptidase M6 - - - 0.0000007841 63.0
BYD1_k127_8680714_0 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 314.0
BYD1_k127_8680714_1 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000002362 162.0
BYD1_k127_8680714_2 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000001803 160.0
BYD1_k127_8680714_3 Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate - - - 0.0000000000000000001167 90.0
BYD1_k127_8680714_4 Evidence 5 No homology to any previously reported sequences - - - 0.000000000001272 80.0
BYD1_k127_8691593_0 Carboxypeptidase regulatory-like domain - - - 0.0 1058.0
BYD1_k127_8691593_1 - - - - 5.319e-252 811.0
BYD1_k127_8691593_10 COGs COG4591 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000007997 168.0
BYD1_k127_8691593_11 nitrite reductase [NAD(P)H] activity - - - 0.000000000000000007826 89.0
BYD1_k127_8691593_12 Bacterial regulatory proteins, tetR family - - - 0.00000108 53.0
BYD1_k127_8691593_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 5.168e-250 777.0
BYD1_k127_8691593_3 Peptidase, S9A B C family, catalytic domain protein K01278,K18574 - 3.4.14.12,3.4.14.5 4.764e-230 732.0
BYD1_k127_8691593_4 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 392.0
BYD1_k127_8691593_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 372.0
BYD1_k127_8691593_6 COG4591 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 361.0
BYD1_k127_8691593_7 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006071 337.0
BYD1_k127_8691593_8 Outer membrane lipoprotein-sorting protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 326.0
BYD1_k127_8691593_9 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P) K07094 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006419 308.0
BYD1_k127_8758352_0 N-terminal domain of unknown function (DUF4140) - - - 0.00000000000000000000000000000000000000000000000001762 194.0
BYD1_k127_8781372_0 TonB-linked outer membrane protein, SusC RagA family - - - 0.0 1397.0
BYD1_k127_8781372_1 GTP-binding protein LepA C-terminus K03596 - - 1.162e-318 983.0
BYD1_k127_8781372_10 Fibronectin type 3 domain - - - 1.066e-201 659.0
BYD1_k127_8781372_11 Psort location OuterMembrane, score - - - 1.269e-195 641.0
BYD1_k127_8781372_12 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 606.0
BYD1_k127_8781372_13 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004143 597.0
BYD1_k127_8781372_14 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 543.0
BYD1_k127_8781372_15 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 544.0
BYD1_k127_8781372_16 Acetokinase family K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004726 542.0
BYD1_k127_8781372_17 Susd and RagB outer membrane lipoprotein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 537.0
BYD1_k127_8781372_18 Psort location Extracellular, score - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004037 517.0
BYD1_k127_8781372_19 Domain of unknown function (DUF389) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002722 484.0
BYD1_k127_8781372_2 ATP-binding cassette protein, ChvD family - - - 4.714e-296 914.0
BYD1_k127_8781372_20 two component, sigma54 specific, transcriptional regulator, Fis family K07713 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001196 477.0
BYD1_k127_8781372_21 DNA ligase K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004004 478.0
BYD1_k127_8781372_22 Phosphotransacetylase K00625,K13788 - 2.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 441.0
BYD1_k127_8781372_23 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009953 441.0
BYD1_k127_8781372_24 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 435.0
BYD1_k127_8781372_25 Permease, YjgP YjgQ family K07091 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003514 416.0
BYD1_k127_8781372_26 OstA-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004046 414.0
BYD1_k127_8781372_27 Peptidase, M48 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 377.0
BYD1_k127_8781372_28 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 389.0
BYD1_k127_8781372_29 Starch-binding associating with outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004928 364.0
BYD1_k127_8781372_3 TonB-linked outer membrane protein, SusC RagA family - - - 8.319e-295 939.0
BYD1_k127_8781372_30 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 355.0
BYD1_k127_8781372_31 Haem-binding uptake, Tiki superfamily, ChaN - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 341.0
BYD1_k127_8781372_32 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 325.0
BYD1_k127_8781372_33 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009786 324.0
BYD1_k127_8781372_34 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 304.0
BYD1_k127_8781372_35 3-hydroxybutyryl-CoA dehydrogenase K00074 - 1.1.1.157 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 307.0
BYD1_k127_8781372_36 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 302.0
BYD1_k127_8781372_37 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007383 310.0
BYD1_k127_8781372_38 S1 domain K00243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 299.0
BYD1_k127_8781372_39 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000404 302.0
BYD1_k127_8781372_4 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 - 2.7.6.5,3.1.7.2 6.098e-279 875.0
BYD1_k127_8781372_40 Indolepyruvate K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008434 279.0
BYD1_k127_8781372_41 PFAM Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001026 266.0
BYD1_k127_8781372_42 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001273 254.0
BYD1_k127_8781372_43 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000044 259.0
BYD1_k127_8781372_44 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004242 249.0
BYD1_k127_8781372_45 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000008928 258.0
BYD1_k127_8781372_46 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000004354 225.0
BYD1_k127_8781372_47 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000001267 208.0
BYD1_k127_8781372_48 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000000000000000007623 199.0
BYD1_k127_8781372_49 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000000000000000000000002061 198.0
BYD1_k127_8781372_5 Glycosyl hydrolases family 2 K01192,K15855 - 3.2.1.165,3.2.1.25 6.929e-267 846.0
BYD1_k127_8781372_50 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000003068 195.0
BYD1_k127_8781372_51 ABC-type transport system involved in cytochrome c biogenesis permease component K02194 - - 0.000000000000000000000000000000000000000000000000005315 188.0
BYD1_k127_8781372_52 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000001181 184.0
BYD1_k127_8781372_53 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000000000001691 196.0
BYD1_k127_8781372_54 -O-antigen K16705 - - 0.0000000000000000000000000000000000000000000000007335 194.0
BYD1_k127_8781372_55 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000001204 167.0
BYD1_k127_8781372_56 Low-potential electron donor to a number of redox enzymes K03839 - - 0.000000000000000000000000000000000000000000001621 169.0
BYD1_k127_8781372_57 Cytidine and deoxycytidylate deaminase zinc-binding region K01489 - 3.5.4.5 0.000000000000000000000000000000000000000002033 160.0
BYD1_k127_8781372_58 GtrA-like protein - - - 0.000000000000000000000000000000000000000002488 159.0
BYD1_k127_8781372_59 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.00000000000000000000000000000000000006109 151.0
BYD1_k127_8781372_6 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179,K08941 - 1.2.7.8 7.365e-228 717.0
BYD1_k127_8781372_60 - - - - 0.00000000000000000000000000000000002902 154.0
BYD1_k127_8781372_61 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain - - - 0.0000000000000000000000000000000002783 146.0
BYD1_k127_8781372_62 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000003221 122.0
BYD1_k127_8781372_63 cell redox homeostasis K03671 - - 0.0000000000000000000000000001383 121.0
BYD1_k127_8781372_64 - - - - 0.000000000000000001892 85.0
BYD1_k127_8781372_65 - K21449 - - 0.00000000000877 78.0
BYD1_k127_8781372_66 - - - - 0.00000000001523 70.0
BYD1_k127_8781372_67 amine dehydrogenase activity - - - 0.00000000002608 77.0
BYD1_k127_8781372_68 Putative auto-transporter adhesin, head GIN domain - - - 0.00000000003203 76.0
BYD1_k127_8781372_69 - - - - 0.0000000001151 65.0
BYD1_k127_8781372_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00819 - 2.6.1.13 2.376e-210 659.0
BYD1_k127_8781372_70 GCN5-related N-acetyl-transferase K06975 - - 0.000000001707 64.0
BYD1_k127_8781372_73 Protein of unknown function (DUF1501) - - - 0.000005234 59.0
BYD1_k127_8781372_8 Histidine ammonia-lyase K01745 - 4.3.1.3 1.575e-208 659.0
BYD1_k127_8781372_9 Voltage gated chloride channel K03281 - - 4.098e-206 657.0
BYD1_k127_8782512_0 3' exoribonuclease, RNase T-like K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000003253 267.0
BYD1_k127_8782512_1 PIF1-like helicase - - - 0.000000000000000000000000000000000000000000000000000000000000000000254 241.0
BYD1_k127_8782512_2 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000114 85.0
BYD1_k127_8782512_3 COG3209 Rhs family protein - - - 0.0000004879 62.0
BYD1_k127_8787246_0 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 428.0
BYD1_k127_8787246_1 Survival protein SurE K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 330.0
BYD1_k127_8787246_2 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000002797 217.0
BYD1_k127_8787246_3 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000000000000000000000001005 184.0
BYD1_k127_8787246_4 Domain of unknown function (DUF4131) K02238 - - 0.0000000000000000000000000000000000000004133 161.0
BYD1_k127_8787246_5 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000005797 138.0
BYD1_k127_8800549_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.485e-310 970.0
BYD1_k127_8800549_1 Transglutaminase-like superfamily - - - 1.673e-257 821.0
BYD1_k127_8800549_10 iron-containing alcohol dehydrogenase K19955 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 334.0
BYD1_k127_8800549_11 Catalyzes the synthesis of activated sulfate K00860 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 0.000000000000000000000000000000000000000000000000000000001357 205.0
BYD1_k127_8800549_12 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000007392 172.0
BYD1_k127_8800549_13 C-terminal domain of CHU protein family - - - 0.00000000000000000000000000000177 130.0
BYD1_k127_8800549_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000002579 120.0
BYD1_k127_8800549_2 RNB K12573,K12585 - - 2.084e-250 794.0
BYD1_k127_8800549_3 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.585e-221 701.0
BYD1_k127_8800549_4 penicillin-binding protein K05515 - 3.4.16.4 2.444e-199 638.0
BYD1_k127_8800549_5 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 1.9e-198 627.0
BYD1_k127_8800549_6 TIGRFAM capsular exopolysaccharide family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 587.0
BYD1_k127_8800549_7 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 557.0
BYD1_k127_8800549_8 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 511.0
BYD1_k127_8800549_9 Cell cycle protein K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 475.0
BYD1_k127_880598_0 PFAM TonB-dependent Receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007715 610.0
BYD1_k127_880598_1 PFAM Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004107 437.0
BYD1_k127_880598_10 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000002624 179.0
BYD1_k127_880598_11 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000001869 139.0
BYD1_k127_880598_12 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000000000000001706 140.0
BYD1_k127_880598_13 - - - - 0.000000000000000000000005965 110.0
BYD1_k127_880598_14 - - - - 0.00000000000000000000004526 111.0
BYD1_k127_880598_15 - - - - 0.000000000006413 76.0
BYD1_k127_880598_16 Parallel beta-helix repeats - - - 0.0000002179 64.0
BYD1_k127_880598_2 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 379.0
BYD1_k127_880598_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 377.0
BYD1_k127_880598_4 Peptidase family M1 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 377.0
BYD1_k127_880598_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 323.0
BYD1_k127_880598_6 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 320.0
BYD1_k127_880598_7 epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 302.0
BYD1_k127_880598_8 Psort location Cytoplasmic, score 8.96 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005517 284.0
BYD1_k127_880598_9 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008355 288.0
BYD1_k127_8848888_0 Fibrobacter succinogenes major domain (Fib_succ_major) - - - 0.000000000000000000000000000000000000001146 158.0
BYD1_k127_8848888_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000005104 125.0
BYD1_k127_8848888_2 - - - - 0.00000000000005006 80.0
BYD1_k127_8848888_3 - - - - 0.000000000000234 77.0
BYD1_k127_8873861_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 0.0 1007.0
BYD1_k127_8873861_1 Acyl-CoA dehydrogenase C terminal - - - 2.824e-260 812.0
BYD1_k127_8873861_10 Pkd domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 533.0
BYD1_k127_8873861_11 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 450.0
BYD1_k127_8873861_12 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 441.0
BYD1_k127_8873861_13 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 410.0
BYD1_k127_8873861_14 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 401.0
BYD1_k127_8873861_15 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009139 370.0
BYD1_k127_8873861_16 PFAM Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 305.0
BYD1_k127_8873861_17 Domain of unknown function (DUF4835) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 301.0
BYD1_k127_8873861_18 Psort location CytoplasmicMembrane, score 10.00 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 286.0
BYD1_k127_8873861_19 2-oxoglutarate ferredoxin oxidoreductase subunit gamma K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 282.0
BYD1_k127_8873861_2 PFAM Aminotransferase class I and II K00639 - 2.3.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 611.0
BYD1_k127_8873861_20 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002563 272.0
BYD1_k127_8873861_21 Belongs to the glutathione peroxidase family K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000001188 246.0
BYD1_k127_8873861_22 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.00000000000000000000000000000000000000000000000000000000000000000000003829 244.0
BYD1_k127_8873861_23 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001242 232.0
BYD1_k127_8873861_24 outer membrane assembly lipoprotein YfiO K05807 - - 0.0000000000000000000000000000000000000000000000000000000000002897 220.0
BYD1_k127_8873861_25 tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000005235 229.0
BYD1_k127_8873861_26 Ribosomal protein L20 K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.00000000000000000000000000000000000000000000000001298 181.0
BYD1_k127_8873861_27 Gram-negative bacterial TonB protein C-terminal - - - 0.00000000000000000000000000000000000000000000000004427 195.0
BYD1_k127_8873861_28 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000004817 180.0
BYD1_k127_8873861_29 long-chain fatty acid transport protein - - - 0.00000000000000000000000000000000000006089 154.0
BYD1_k127_8873861_3 Aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 589.0
BYD1_k127_8873861_30 COG NOG14434 non supervised orthologous group - - - 0.0000000000000000000000000000000000001312 144.0
BYD1_k127_8873861_31 transcription factor binding - - - 0.0000000000000000000000000000000003697 134.0
BYD1_k127_8873861_32 4 iron, 4 sulfur cluster binding K00176 - 1.2.7.3 0.000000000000000000000000008084 111.0
BYD1_k127_8873861_33 Thioredoxin - - - 0.00000000000000000000000009198 109.0
BYD1_k127_8873861_34 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000001275 92.0
BYD1_k127_8873861_35 Photosynthesis system II assembly factor YCF48 - - - 0.00000000000000000007159 99.0
BYD1_k127_8873861_4 Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 564.0
BYD1_k127_8873861_5 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 578.0
BYD1_k127_8873861_6 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007878 533.0
BYD1_k127_8873861_7 DNA photolyase K01669 - 4.1.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 511.0
BYD1_k127_8873861_8 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 503.0
BYD1_k127_8873861_9 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 495.0
BYD1_k127_8874108_0 methylphosphotriester-DNA alkyltransferase (AraC XylS family) K13652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 505.0
BYD1_k127_8874108_1 COGs COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007414 268.0
BYD1_k127_8874108_2 Diacylglycerol kinase catalytic domain (presumed) - - - 0.0000000000000000000000000000000000000000000000000000000000000000006955 238.0
BYD1_k127_8874108_3 Translation initiation factor K03113 - - 0.00000000000000000000000000000001254 129.0
BYD1_k127_8913225_0 Alpha-2-Macroglobulin K06894 - - 4.79e-223 719.0
BYD1_k127_8978939_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.084e-232 751.0
BYD1_k127_8978939_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 585.0
BYD1_k127_8978939_2 Rhodanese Homology Domain - - - 0.00000000000000000001305 96.0
BYD1_k127_8978939_3 oxidoreductase activity, acting on diphenols and related substances as donors K02636 - 1.10.9.1 0.000000000000002679 81.0
BYD1_k127_8978939_4 Rhodanese Homology Domain - - - 0.0000000009505 67.0
BYD1_k127_9054351_0 Alpha-1,2-mannosidase - - - 0.0 1047.0
BYD1_k127_9054351_1 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01835 - 5.4.2.2 3.792e-224 708.0
BYD1_k127_9054351_10 Belongs to the carbamate kinase family K00926 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008804,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019546,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 364.0
BYD1_k127_9054351_11 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 311.0
BYD1_k127_9054351_12 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 291.0
BYD1_k127_9054351_13 Psort location Cytoplasmic, score K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009749 288.0
BYD1_k127_9054351_14 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003851 247.0
BYD1_k127_9054351_15 PFAM Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000002088 222.0
BYD1_k127_9054351_16 YCII-related domain - - - 0.000000000000000000000000000000000000000000002082 168.0
BYD1_k127_9054351_17 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000001886 141.0
BYD1_k127_9054351_18 Histidine kinase - - - 0.000000000000000000000000000000007194 131.0
BYD1_k127_9054351_19 PD-(D/E)XK nuclease superfamily - - - 0.00000000003726 68.0
BYD1_k127_9054351_2 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 7.52e-219 687.0
BYD1_k127_9054351_3 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 569.0
BYD1_k127_9054351_4 serine protease K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004628 448.0
BYD1_k127_9054351_5 TIGRFAM MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 441.0
BYD1_k127_9054351_6 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 426.0
BYD1_k127_9054351_7 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 400.0
BYD1_k127_9054351_8 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 385.0
BYD1_k127_9054351_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion K01993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005152 374.0
BYD1_k127_9069733_0 PFAM Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 597.0
BYD1_k127_9069733_1 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008593 438.0
BYD1_k127_9069733_2 Psort location OuterMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 411.0
BYD1_k127_9069733_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 410.0
BYD1_k127_9069733_4 Peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 394.0
BYD1_k127_9069733_5 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 379.0
BYD1_k127_9069733_6 uracil phosphoribosyltransferase K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001232 284.0
BYD1_k127_9069733_7 KOW (Kyprides, Ouzounis, Woese) motif. - - - 0.00000000000000000000000000000007637 131.0
BYD1_k127_9069733_8 - - - - 0.00000000000000000002558 96.0
BYD1_k127_9069733_9 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.0003345 45.0
BYD1_k127_9097325_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335,K18331 - 1.12.1.3,1.6.5.3 0.0 1006.0
BYD1_k127_9097325_1 COG4624 Iron only hydrogenase large subunit C-terminal domain K00123,K18332 - 1.12.1.3,1.17.1.9 5.58e-313 965.0
BYD1_k127_9097325_10 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 411.0
BYD1_k127_9097325_11 Thioredoxin-like [2Fe-2S] ferredoxin K18330 - 1.12.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000005169 263.0
BYD1_k127_9097325_12 PFAM chalcone and stilbene - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002095 266.0
BYD1_k127_9097325_13 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000006231 253.0
BYD1_k127_9097325_14 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000485 251.0
BYD1_k127_9097325_15 Psort location Cytoplasmic, score 8.96 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001696 250.0
BYD1_k127_9097325_16 UbiA prenyltransferase family K02548 - 2.5.1.74 0.00000000000000000000000000000000000000000000000000000000000001182 226.0
BYD1_k127_9097325_17 Cation transport regulator - - - 0.0000000000000000000000000000000000000000000000000000000000007703 215.0
BYD1_k127_9097325_18 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000007948 203.0
BYD1_k127_9097325_19 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000004285 202.0
BYD1_k127_9097325_2 Iron hydrogenase small subunit K18332 - 1.12.1.3 1.839e-281 875.0
BYD1_k127_9097325_20 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000002664 201.0
BYD1_k127_9097325_21 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000005946 201.0
BYD1_k127_9097325_22 Ferredoxin K17992 - 1.12.1.3 0.0000000000000000000000000000000000000000000000000000001496 197.0
BYD1_k127_9097325_23 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000006091 193.0
BYD1_k127_9097325_24 Psort location CytoplasmicMembrane, score K09793 - - 0.000000000000000000000000000000000000000000000000007174 184.0
BYD1_k127_9097325_25 Methyltransferase domain - - - 0.000000000000000000000000000000000000000006593 164.0
BYD1_k127_9097325_26 Domain of unknown function (DUF4142) K08995 - - 0.00000000000000000000000000000000000000007696 159.0
BYD1_k127_9097325_27 DRTGG domain - - - 0.0000000000000000000000000000000000005553 142.0
BYD1_k127_9097325_28 DRTGG domain - - - 0.000000000000000000000000000000000002575 141.0
BYD1_k127_9097325_29 FAD binding domain - - - 0.0000000000582 64.0
BYD1_k127_9097325_3 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 6.291e-212 680.0
BYD1_k127_9097325_30 - - - - 0.000004853 51.0
BYD1_k127_9097325_31 Cupin 2, conserved barrel domain protein - - - 0.0004003 48.0
BYD1_k127_9097325_4 COGs COG2723 Beta-glucosidase 6-phospho-beta-glucosidase beta- galactosidase - - - 2.572e-194 612.0
BYD1_k127_9097325_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 560.0
BYD1_k127_9097325_6 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008216 552.0
BYD1_k127_9097325_7 UDP-galactopyranose mutase K01854 - 5.4.99.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 517.0
BYD1_k127_9097325_8 Putative Fe-S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 486.0
BYD1_k127_9097325_9 Domain of unknown function (DUF3471) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 426.0
BYD1_k127_9106115_0 Carboxypeptidase regulatory-like domain - - - 1.662e-287 919.0
BYD1_k127_9106115_1 epimerase - - - 2.03e-232 726.0
BYD1_k127_9106115_10 Starch-binding associating with outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 300.0
BYD1_k127_9106115_11 Polynucleotide kinase 3 phosphatase K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000000000001011 257.0
BYD1_k127_9106115_12 domain protein - - - 0.000000000000000000000000000002897 139.0
BYD1_k127_9106115_13 Type VIII secretion system (T8SS), CsgF protein K04338 - - 0.00000000000000000000000000008331 121.0
BYD1_k127_9106115_14 Curli assembly protein CsgE K04337 - - 0.000000000000000000000000006797 115.0
BYD1_k127_9106115_15 PFAM Curlin associated - - - 0.0000000000005444 78.0
BYD1_k127_9106115_16 Thermolysin metallopeptidase, catalytic domain K01400 - 3.4.24.28 0.000007734 59.0
BYD1_k127_9106115_18 Curlin associated repeat - - - 0.0002045 50.0
BYD1_k127_9106115_2 Histidine kinase - - - 4.712e-208 666.0
BYD1_k127_9106115_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 608.0
BYD1_k127_9106115_4 Psort location CytoplasmicMembrane, score K19225 - 3.4.21.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 504.0
BYD1_k127_9106115_5 peptidase activity, acting on L-amino acid peptides K09955,K13276 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 476.0
BYD1_k127_9106115_6 Curli production assembly transport component CsgG K06214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 414.0
BYD1_k127_9106115_7 Peptide-N-glycosidase F, N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 384.0
BYD1_k127_9106115_8 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 366.0
BYD1_k127_9106115_9 Ligand-binding protein SH3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 284.0
BYD1_k127_9107652_0 FAD dependent oxidoreductase K07137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 585.0
BYD1_k127_9107652_1 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K03272 - 2.7.1.167,2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 342.0
BYD1_k127_9107652_2 Belongs to the UPF0758 family K03630 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007943 255.0
BYD1_k127_9107652_3 - - - - 0.000000000000000000000000000000000000000000000000000000000901 208.0
BYD1_k127_9107652_4 Outer membrane protein beta-barrel domain - - - 0.0000000000000000000000000000000000000000214 162.0
BYD1_k127_9107652_5 Binds directly to 16S ribosomal RNA K02968 - - 0.000000000000000000000000000815 114.0
BYD1_k127_9205590_0 Domain of unknown function (DUF4301) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 604.0
BYD1_k127_9205590_1 Nucleotidyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 356.0
BYD1_k127_9205590_2 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 338.0
BYD1_k127_9205590_3 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000000000007425 228.0
BYD1_k127_9205590_4 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000007354 190.0
BYD1_k127_9205590_5 transcriptional regulator - - - 0.0000000000000000000000000000000000000007011 151.0
BYD1_k127_9205590_6 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000000597 110.0
BYD1_k127_9205590_7 Galactose oxidase, central domain - - - 0.0000000000000000002689 102.0
BYD1_k127_9205590_8 OmpA family K03286 - - 0.00002808 55.0
BYD1_k127_9236350_0 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 531.0
BYD1_k127_9236350_1 Glycosyltransferase, group 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007202 520.0
BYD1_k127_9236350_10 Cellulose binding domain - - - 0.000000000000009148 87.0
BYD1_k127_9236350_2 glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 448.0
BYD1_k127_9236350_3 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 355.0
BYD1_k127_9236350_4 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 314.0
BYD1_k127_9236350_5 PFAM Cupin 2 conserved barrel domain protein K11312 - - 0.000000000000000000000000000000000001793 140.0
BYD1_k127_9236350_6 PFAM SMP-30 Gluconolaconase - - - 0.000000000000000000000000001532 127.0
BYD1_k127_9236350_7 GHMP kinase, N-terminal domain protein K07031 - 2.7.1.168 0.000000000000000000000000003162 111.0
BYD1_k127_9236350_8 Domain of unknown function (DUF4831) - - - 0.0000000000000000000004037 109.0
BYD1_k127_9236350_9 Protein of unknown function (DUF4199) - - - 0.0000000000000000006304 94.0
BYD1_k127_9319494_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1038.0
BYD1_k127_9319494_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 551.0
BYD1_k127_9319494_10 Domain of unknown function (DUF3127) - - - 0.0000000000000000000000001087 111.0
BYD1_k127_9319494_11 - - - - 0.00000000000000000000000478 113.0
BYD1_k127_9319494_12 PFAM Acyl-CoA reductase (LuxC) - - - 0.000000000000005662 86.0
BYD1_k127_9319494_2 Sugar nucleotidyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 486.0
BYD1_k127_9319494_3 peptide catabolic process K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008209 300.0
BYD1_k127_9319494_4 Radical SAM superfamily K04070 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001072 287.0
BYD1_k127_9319494_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003823 279.0
BYD1_k127_9319494_6 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000009879 229.0
BYD1_k127_9319494_7 MafB19-like deaminase K01487 - 3.5.4.3 0.00000000000000000000000000000000000000000000000000000003731 200.0
BYD1_k127_9319494_8 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000000000005379 148.0
BYD1_k127_9319494_9 Ribosomal protein L31 K02909 - - 0.000000000000000000000000000000000009951 137.0
BYD1_k127_9373144_0 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 622.0
BYD1_k127_9373144_1 Heat shock 70 kDa protein K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 550.0
BYD1_k127_9373144_10 23S rRNA-intervening sequence protein - - - 0.0000000000000000000000000000000003873 134.0
BYD1_k127_9373144_11 PFAM Membrane protein of K08972 - - 0.0000000000000000000000000000001199 127.0
BYD1_k127_9373144_12 - - - - 0.000000000000000000000005103 114.0
BYD1_k127_9373144_2 Belongs to the peptidase M16 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 438.0
BYD1_k127_9373144_3 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 428.0
BYD1_k127_9373144_4 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004276 292.0
BYD1_k127_9373144_5 Pseudouridine synthase K06177,K06180 - 5.4.99.23,5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000001467 263.0
BYD1_k127_9373144_6 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000363 241.0
BYD1_k127_9373144_7 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000002503 226.0
BYD1_k127_9373144_8 Methyltransferase domain K00588 - 2.1.1.104 0.000000000000000000000000000000000000000000000000000000000000005463 223.0
BYD1_k127_9373144_9 Pyridoxamine 5'-phosphate oxidase family protein K07005 - - 0.0000000000000000000000000000000000000000001723 163.0
BYD1_k127_9382977_0 COGs COG1033 exporter of the RND superfamily protein K07003 - - 7.065e-210 678.0
BYD1_k127_9382977_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004026 488.0
BYD1_k127_9382977_2 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006416 344.0
BYD1_k127_9382977_3 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 319.0
BYD1_k127_9382977_4 by modhmm K03655 - 3.6.4.12 0.000000000000000000005577 106.0
BYD1_k127_9382977_5 - - - - 0.000000000000000003769 92.0
BYD1_k127_9382977_6 ABC transporter, ATP-binding protein K06158 - - 0.00000000000007055 76.0
BYD1_k127_9394191_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1535.0
BYD1_k127_9394191_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.036e-251 783.0
BYD1_k127_9394191_10 Belongs to the acetyltransferase family. ArgA subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001501 273.0
BYD1_k127_9394191_11 Signal peptidase (SPase) II K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000000000000000000003591 259.0
BYD1_k127_9394191_12 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003673 269.0
BYD1_k127_9394191_13 outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000843 269.0
BYD1_k127_9394191_14 PFAM Phosphoribosyl transferase domain K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000002131 239.0
BYD1_k127_9394191_15 Psort location OuterMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000002761 245.0
BYD1_k127_9394191_16 Endonuclease Exonuclease phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000717 236.0
BYD1_k127_9394191_17 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.0000000000000000000000000000000000000000000000000001337 194.0
BYD1_k127_9394191_18 Molecular chaperone DnaK - - - 0.00000000000000000000000000000000000000000008399 164.0
BYD1_k127_9394191_19 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000001474 125.0
BYD1_k127_9394191_2 Dipeptidase - - - 1.023e-229 724.0
BYD1_k127_9394191_20 COG NOG11650 non supervised orthologous group - - - 0.00000000000000000000000000005291 128.0
BYD1_k127_9394191_21 Repeat domain in Vibrio, Colwellia, Bradyrhizobium and Shewanella - - - 0.000000000000000000000000004487 129.0
BYD1_k127_9394191_22 Psort location CytoplasmicMembrane, score 9.82 - - - 0.00000000000000000000000002723 111.0
BYD1_k127_9394191_23 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000000000000000418 115.0
BYD1_k127_9394191_24 ATP synthase K02114 - - 0.00000000000000000004297 91.0
BYD1_k127_9394191_25 Putative methyltransferase - - - 0.0000000000000003467 78.0
BYD1_k127_9394191_27 amine dehydrogenase activity - - - 0.0000000000004382 83.0
BYD1_k127_9394191_28 Endonuclease/Exonuclease/phosphatase family - - - 0.0000001473 65.0
BYD1_k127_9394191_29 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000008878 51.0
BYD1_k127_9394191_3 peptidylprolyl isomerase K01802,K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005736 420.0
BYD1_k127_9394191_30 - - - - 0.0002799 46.0
BYD1_k127_9394191_4 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 351.0
BYD1_k127_9394191_5 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 339.0
BYD1_k127_9394191_6 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000139 316.0
BYD1_k127_9394191_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 297.0
BYD1_k127_9394191_8 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 299.0
BYD1_k127_9394191_9 Belongs to the ABC-4 integral membrane protein family. FtsX subfamily K09811 GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002368 280.0
BYD1_k127_9456835_0 ABC transporter C-terminal domain K15738 - - 2.242e-199 639.0
BYD1_k127_9456835_1 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001723 438.0
BYD1_k127_9456835_2 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002775 299.0
BYD1_k127_9456835_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000000000005263 188.0
BYD1_k127_9456835_4 Fe-S-cluster oxidoreductase K06940 - - 0.000000000000000000000000006179 111.0
BYD1_k127_9456835_5 'Cold-shock' DNA-binding domain K03704 - - 0.0000000000000000008201 88.0
BYD1_k127_9545953_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 3.885e-272 857.0
BYD1_k127_9545953_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 6.917e-194 610.0
BYD1_k127_9545953_2 Domain of unknown function (DUF4290) - - - 0.00000000000000000000000000000000000000000000000000000000405 206.0
BYD1_k127_9545953_3 Cell wall-active antibiotics response 4TMS YvqF - - - 0.0000000000000000000000000000000000000000000003373 175.0
BYD1_k127_9545953_4 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000002443 98.0
BYD1_k127_9545953_6 - - - - 0.0001304 54.0
BYD1_k127_971041_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 6.115e-194 624.0
BYD1_k127_971041_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 524.0
BYD1_k127_971041_10 Rhomboid family - - - 0.000000000000000003572 85.0
BYD1_k127_971041_2 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 357.0
BYD1_k127_971041_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 335.0
BYD1_k127_971041_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 327.0
BYD1_k127_971041_5 Tetratricopeptide repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001703 233.0
BYD1_k127_971041_6 Belongs to the DNA glycosylase MPG family K03652 GO:0003674,GO:0003824,GO:0003905,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000002247 215.0
BYD1_k127_971041_7 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000005819 192.0
BYD1_k127_971041_8 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000000000000000000000000000001526 171.0
BYD1_k127_971041_9 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000002703 125.0
BYD1_k127_9711822_0 PFAM GH3 auxin-responsive promoter - - - 3.735e-205 647.0
BYD1_k127_9711822_1 Permease, YjgP YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 353.0
BYD1_k127_9711822_2 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000001779 265.0
BYD1_k127_9711822_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000003608 117.0
BYD1_k127_9781649_0 Carboxyl transferase domain protein K01966 - 2.1.3.15,6.4.1.3 7.573e-253 788.0
BYD1_k127_9781649_1 Biotin carboxylase K01961,K01965 - 6.3.4.14,6.4.1.2,6.4.1.3 5.215e-234 733.0
BYD1_k127_9781649_10 PFAM Outer membrane efflux protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002983 305.0
BYD1_k127_9781649_11 Belongs to the MenA family. Type 1 subfamily K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005505 296.0
BYD1_k127_9781649_12 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000113 243.0
BYD1_k127_9781649_13 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000000000009806 238.0
BYD1_k127_9781649_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000003228 233.0
BYD1_k127_9781649_15 chorismate binding enzyme K02361,K02552 - 5.4.4.2 0.000000000000000000000000000000000000000000000000000001987 205.0
BYD1_k127_9781649_16 Belongs to the enoyl-CoA hydratase isomerase family K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000802 185.0
BYD1_k127_9781649_17 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000003588 184.0
BYD1_k127_9781649_18 - - - - 0.00000000000000000000000000000000000000000007272 175.0
BYD1_k127_9781649_19 Family of unknown function (DUF1028) K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000001992 172.0
BYD1_k127_9781649_2 Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) K01661 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 477.0
BYD1_k127_9781649_20 biotin-requiring enzyme K01960 - 6.4.1.1 0.000000000000000000000000000000000000000007061 159.0
BYD1_k127_9781649_21 PFAM thioesterase superfamily K19222 - 3.1.2.28 0.00000000000000000000000000000000000000001304 160.0
BYD1_k127_9781649_22 Iron-sulfur cluster binding protein - - - 0.000000000000000000000000000000000000348 149.0
BYD1_k127_9781649_23 phosphoesterase, PA-phosphatase related - - - 0.000000000000000000000000000002726 128.0
BYD1_k127_9781649_24 -acetyltransferase - - - 0.0000000000000000000000000008978 119.0
BYD1_k127_9781649_25 Peptidase C10 family - - - 0.000000000000001499 90.0
BYD1_k127_9781649_26 Outer membrane protein beta-barrel domain - - - 0.000000000000001725 85.0
BYD1_k127_9781649_27 Outer membrane protein beta-barrel domain - - - 0.0000000000001088 83.0
BYD1_k127_9781649_29 Fibronectin type 3 domain - - - 0.0000002153 64.0
BYD1_k127_9781649_3 Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) K02551 - 2.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 479.0
BYD1_k127_9781649_30 - - - - 0.0001887 52.0
BYD1_k127_9781649_4 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003946 439.0
BYD1_k127_9781649_5 Aminopeptidase N K01256 - 3.4.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 419.0
BYD1_k127_9781649_6 LVIVD repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 393.0
BYD1_k127_9781649_7 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 400.0
BYD1_k127_9781649_8 Domain of Unknown Function with PDB structure (DUF3857) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 385.0
BYD1_k127_9781649_9 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004021 372.0
BYD1_k127_9799888_0 Glycosyl hydrolase family 65, C-terminal domain K00691,K01087,K01194,K01838,K03731,K05342 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008801,GO:0009058,GO:0009292,GO:0009294,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016853,GO:0016866,GO:0016868,GO:0019203,GO:0030312,GO:0033554,GO:0034637,GO:0040007,GO:0042221,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044424,GO:0044444,GO:0044464,GO:0044764,GO:0046351,GO:0046677,GO:0046872,GO:0050896,GO:0051704,GO:0051716,GO:0071704,GO:0071944,GO:1901576 2.4.1.216,2.4.1.64,2.4.1.8,3.1.3.12,3.2.1.28,5.4.2.6 0.0 1166.0
BYD1_k127_9799888_1 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 6.312e-312 967.0
BYD1_k127_9799888_10 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006778 247.0
BYD1_k127_9799888_11 uridine kinase K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000002138 241.0
BYD1_k127_9799888_12 Phosphoribulokinase / Uridine kinase family K00876 - 2.7.1.48 0.000000000000000000000000000000000000000000000000000000001466 207.0
BYD1_k127_9799888_13 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000002544 182.0
BYD1_k127_9799888_14 PFAM peptidylprolyl isomerase FKBP-type K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000001778 184.0
BYD1_k127_9799888_15 - - - - 0.0000000000000000000000000000000000000001058 156.0
BYD1_k127_9799888_16 Endonuclease/Exonuclease/phosphatase family - - - 0.000000000000000000000000000000000174 146.0
BYD1_k127_9799888_17 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.00000000000000000000000000000000785 134.0
BYD1_k127_9799888_2 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 1.338e-207 653.0
BYD1_k127_9799888_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 1.564e-203 649.0
BYD1_k127_9799888_4 hydrolase activity, hydrolyzing O-glycosyl compounds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000829 452.0
BYD1_k127_9799888_5 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 355.0
BYD1_k127_9799888_6 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000153 314.0
BYD1_k127_9799888_7 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 298.0
BYD1_k127_9799888_8 membrane K09650 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000005966 258.0
BYD1_k127_9799888_9 Endonuclease exonuclease phosphatase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008045 260.0
BYD1_k127_9887695_0 AMP-binding enzyme K01897 - 6.2.1.3 4.74e-257 807.0
BYD1_k127_9887695_1 Peptidase family C25 - - - 2.184e-241 786.0
BYD1_k127_9887695_10 Psort location CytoplasmicMembrane, score - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007259 388.0
BYD1_k127_9887695_11 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 361.0
BYD1_k127_9887695_12 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 327.0
BYD1_k127_9887695_13 Type IX secretion system membrane protein PorP/SprF - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000805 294.0
BYD1_k127_9887695_14 PFAM Cation efflux - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 289.0
BYD1_k127_9887695_15 MotA TolQ ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 288.0
BYD1_k127_9887695_16 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003435 241.0
BYD1_k127_9887695_17 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000002686 206.0
BYD1_k127_9887695_18 Peroxiredoxin K04063 - - 0.000000000000000000000000000000000000000000000000005495 184.0
BYD1_k127_9887695_19 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001505 182.0
BYD1_k127_9887695_2 Peptidase family C25 - - - 1.996e-239 785.0
BYD1_k127_9887695_20 Acyltransferase - - - 0.0000000000000000000000000000000000000000000005939 172.0
BYD1_k127_9887695_21 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000005598 169.0
BYD1_k127_9887695_22 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000602 150.0
BYD1_k127_9887695_23 Transport energizing protein, ExbD TolR family K03559 - - 0.0000000000000000000000000001983 119.0
BYD1_k127_9887695_24 Pfam:DUF377 K20885 - 2.4.1.339,2.4.1.340 0.0000000000000000000000001653 106.0
BYD1_k127_9887695_25 - - - - 0.0000000000000000000000002026 115.0
BYD1_k127_9887695_26 chlorophyll binding - - - 0.000000000000000000000001522 119.0
BYD1_k127_9887695_27 - - - - 0.000000000000000001448 92.0
BYD1_k127_9887695_29 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000006677 52.0
BYD1_k127_9887695_3 ABC-type multidrug transport system ATPase and permease K11085 - - 5.923e-222 702.0
BYD1_k127_9887695_30 ATP-independent chaperone mediated protein folding K06006,K07803 - - 0.000001897 57.0
BYD1_k127_9887695_31 - - - - 0.00002766 53.0
BYD1_k127_9887695_4 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 606.0
BYD1_k127_9887695_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006247 583.0
BYD1_k127_9887695_6 Psort location Cytoplasmic, score K08602 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 538.0
BYD1_k127_9887695_7 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006769 514.0
BYD1_k127_9887695_8 Peptidase dimerisation domain K13049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 475.0
BYD1_k127_9887695_9 Mur ligase family, catalytic domain K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 379.0
BYD1_k127_990563_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 5.912e-198 636.0
BYD1_k127_990563_1 amine dehydrogenase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 450.0
BYD1_k127_990563_2 glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 375.0
BYD1_k127_990563_3 radical SAM domain protein K07739 - 2.3.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 324.0
BYD1_k127_990563_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K13668 - 2.4.1.346 0.00000000000000000000000000000000000000000000000000000000000000000002022 238.0
BYD1_k127_990563_5 - - - - 0.00000000000000000000000000000000000763 155.0
BYD1_k127_9913666_0 Nitric oxide reductase K04561 - 1.7.2.5 0.0 1202.0
BYD1_k127_9913666_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 4.738e-288 893.0
BYD1_k127_9913666_10 sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000745 475.0
BYD1_k127_9913666_11 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 478.0
BYD1_k127_9913666_12 PFAM Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 429.0
BYD1_k127_9913666_13 TonB-dependent Receptor Plug Domain K16089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003877 445.0
BYD1_k127_9913666_14 Clp protease K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 359.0
BYD1_k127_9913666_15 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 378.0
BYD1_k127_9913666_16 ABC transporter, ATP-binding protein K09817 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 314.0
BYD1_k127_9913666_17 ABC 3 transport family protein K02075,K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 312.0
BYD1_k127_9913666_18 PFAM Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 312.0
BYD1_k127_9913666_19 PFAM Bacterial trigger factor protein (TF) K03545 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 314.0
BYD1_k127_9913666_2 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 1.967e-257 801.0
BYD1_k127_9913666_20 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 289.0
BYD1_k127_9913666_21 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003263 272.0
BYD1_k127_9913666_22 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001252 263.0
BYD1_k127_9913666_23 ATP synthase subunit D K02120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001214 258.0
BYD1_k127_9913666_24 LysM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002425 272.0
BYD1_k127_9913666_25 Bacterial regulatory protein, Fis family K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000002611 241.0
BYD1_k127_9913666_26 COG0803 ABC-type metal ion transport system, periplasmic component surface adhesin K09815,K11707 - - 0.000000000000000000000000000000000000000000000000000000000000008073 227.0
BYD1_k127_9913666_27 COG COG0636 F0F1-type ATP synthase, subunit c Archaeal vacuolar-type H -ATPase, subunit K K02124 - - 0.000000000000000000000000000000000000000000000000000000000003773 211.0
BYD1_k127_9913666_28 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000000000000000000000000008861 203.0
BYD1_k127_9913666_29 chitin binding K01183,K05989 - 3.2.1.14,3.2.1.40 0.000000000000000000000000000000000000000000000000000003315 206.0
BYD1_k127_9913666_3 TonB-dependent receptor - - - 7.189e-252 794.0
BYD1_k127_9913666_30 Transposase - - - 0.00000000000000000000000000000000000000000000000000001003 201.0
BYD1_k127_9913666_31 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.0000000000000000000000000000000000000000004642 164.0
BYD1_k127_9913666_32 Domain of unknown function (DUF4294) - - - 0.00000000000000000000000000000000000009268 148.0
BYD1_k127_9913666_33 HmuY protein - - - 0.0000000000000000000000000000000000001254 156.0
BYD1_k127_9913666_34 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000002983 143.0
BYD1_k127_9913666_35 - - - - 0.000000000000000000000000000000003669 139.0
BYD1_k127_9913666_36 protein transport - - - 0.000000000000000000000004229 103.0
BYD1_k127_9913666_4 ATP synthase alpha beta family, nucleotide-binding domain K02118 - - 1.399e-246 765.0
BYD1_k127_9913666_5 Pfam Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 1.689e-215 685.0
BYD1_k127_9913666_6 homogentisate 12-dioxygenase K00451 - 1.13.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 600.0
BYD1_k127_9913666_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004072 569.0
BYD1_k127_9913666_8 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 567.0
BYD1_k127_9913666_9 Fumarylacetoacetase K01555 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 544.0
BYD1_k127_991478_0 ABC transporter, ATP-binding protein K06158 - - 6.826e-207 659.0
BYD1_k127_991478_1 cellulose binding - - - 0.0000000000000000000000000000000000001384 156.0
BYD1_k127_9915107_0 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 448.0
BYD1_k127_9915107_1 biotin lipoate A B protein ligase K03800 - 6.3.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 405.0
BYD1_k127_9915107_2 Protein involved in cellulose biosynthesis - - - 0.00000000000000000000000000000000000000000000000000000000000124 221.0
BYD1_k127_9915107_3 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000006396 203.0
BYD1_k127_992430_0 MacB-like periplasmic core domain K02004 - - 5.4e-323 1006.0
BYD1_k127_992430_1 FtsX-like permease family - - - 7.365e-299 936.0
BYD1_k127_992430_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 454.0
BYD1_k127_992430_3 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 431.0
BYD1_k127_992430_4 PKD domain - - - 0.0000000000000000000001451 113.0
BYD1_k127_992430_5 Photosynthesis system II assembly factor YCF48 - - - 0.000007113 59.0
BYD1_k127_992430_6 Pregnancy-associated plasma protein-A - - - 0.0004539 53.0