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Overview

ID MAG00022
Name BYD1_bin.32
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Rhodocyclaceae
Genus Fen-999
Species
Assembly information
Completeness (%) 82.85
Contamination (%) 1.29
GC content (%) 63.0
N50 (bp) 44,680
Genome size (bp) 3,261,795

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2984

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10175965_0 AcyL-CoA dehydrogenase K06445 - - 0.0 1293.0
BYD1_k127_10175965_1 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0 1025.0
BYD1_k127_10175965_10 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000877 484.0
BYD1_k127_10175965_11 (Lipo)protein K07287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 477.0
BYD1_k127_10175965_12 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 469.0
BYD1_k127_10175965_13 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 439.0
BYD1_k127_10175965_14 Bacterial extracellular solute-binding protein K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 443.0
BYD1_k127_10175965_15 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 413.0
BYD1_k127_10175965_16 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 411.0
BYD1_k127_10175965_17 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 403.0
BYD1_k127_10175965_18 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 374.0
BYD1_k127_10175965_19 )-tartrate dehydratase K03780 GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0050896 4.2.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006378 366.0
BYD1_k127_10175965_2 fad dependent oxidoreductase K07137 - - 1.005e-263 821.0
BYD1_k127_10175965_20 RNA polymerase sigma K03087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 384.0
BYD1_k127_10175965_21 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 338.0
BYD1_k127_10175965_22 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 329.0
BYD1_k127_10175965_23 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009765 316.0
BYD1_k127_10175965_24 lytic murein transglycosylase K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 345.0
BYD1_k127_10175965_25 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008697 304.0
BYD1_k127_10175965_26 PFAM Peptidase S24 S26A S26B, conserved region K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001852 297.0
BYD1_k127_10175965_27 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 294.0
BYD1_k127_10175965_28 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007589 302.0
BYD1_k127_10175965_29 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K05796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 288.0
BYD1_k127_10175965_3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 9.111e-215 674.0
BYD1_k127_10175965_30 Protein of unknown function (DUF1631) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 310.0
BYD1_k127_10175965_31 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006079 284.0
BYD1_k127_10175965_32 diguanylate cyclase K13069 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008381 279.0
BYD1_k127_10175965_33 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003661 268.0
BYD1_k127_10175965_34 COG1680 Beta-lactamase class C and other penicillin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006507 261.0
BYD1_k127_10175965_35 PBP superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001041 241.0
BYD1_k127_10175965_36 Belongs to the ABC transporter superfamily K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000002407 240.0
BYD1_k127_10175965_37 Iron-containing alcohol dehydrogenase K08325 - - 0.000000000000000000000000000000000000000000000000000000000000292 217.0
BYD1_k127_10175965_38 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.000000000000000000000000000000000000000000000000000000001101 214.0
BYD1_k127_10175965_39 Haemolytic - - - 0.00000000000000000000000000000000000000000000000000000001895 200.0
BYD1_k127_10175965_4 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 1.678e-198 622.0
BYD1_k127_10175965_40 Isochorismatase family - - - 0.00000000000000000000000000000000000000000000000000000005455 201.0
BYD1_k127_10175965_41 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000000000000000000007181 197.0
BYD1_k127_10175965_42 - - - - 0.00000000000000000000000000000000000000000000000002459 185.0
BYD1_k127_10175965_43 Ricin-type beta-trefoil - - - 0.00000000000000000000000000000000000009981 151.0
BYD1_k127_10175965_44 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000001095 139.0
BYD1_k127_10175965_45 - - - - 0.0000000000000000000000000000001221 129.0
BYD1_k127_10175965_46 Mut7-C ubiquitin - - - 0.00000000000000000000000003902 110.0
BYD1_k127_10175965_47 - - - - 0.000000000000000000000001894 111.0
BYD1_k127_10175965_48 - - - - 0.00000000000000008739 86.0
BYD1_k127_10175965_49 SUKH-3 immunity protein - - - 0.0000000003288 66.0
BYD1_k127_10175965_5 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000958 606.0
BYD1_k127_10175965_51 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000002423 58.0
BYD1_k127_10175965_52 - - - - 0.0000002088 55.0
BYD1_k127_10175965_55 - - - - 0.00004373 53.0
BYD1_k127_10175965_56 NMT1-like family K02051 - - 0.000134 47.0
BYD1_k127_10175965_6 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004541 569.0
BYD1_k127_10175965_7 Fumarate hydratase (Fumerase) K03779 - 4.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 531.0
BYD1_k127_10175965_8 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 521.0
BYD1_k127_10175965_9 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 511.0
BYD1_k127_10239912_0 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 5.046e-232 728.0
BYD1_k127_10239912_1 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008625 389.0
BYD1_k127_10239912_2 SMART chemotaxis sensory transducer - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 328.0
BYD1_k127_10239912_3 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003808 272.0
BYD1_k127_10239912_4 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000008399 164.0
BYD1_k127_10239912_5 Zinc-finger domain - - - 0.000000000000000002797 83.0
BYD1_k127_10352097_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1293.0
BYD1_k127_10352097_1 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 443.0
BYD1_k127_10352097_2 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005141 239.0
BYD1_k127_10352097_3 Oligoketide cyclase lipid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004764 222.0
BYD1_k127_10352097_4 NfeD-like C-terminal, partner-binding K07340 - - 0.0000000000000000000000000000000000000000000000000003846 187.0
BYD1_k127_10414893_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 451.0
BYD1_k127_10414893_1 Pfam Glycosyl transferase family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000512 153.0
BYD1_k127_10414893_2 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000000000002332 116.0
BYD1_k127_10414893_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.00000000000000000741 92.0
BYD1_k127_10414893_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000005482 72.0
BYD1_k127_10414893_5 - - - - 0.000001444 58.0
BYD1_k127_10423926_0 Beta-lactamase - - - 0.0 1092.0
BYD1_k127_10423926_1 Elongation factor SelB, winged helix K03833 - - 2.109e-273 854.0
BYD1_k127_10423926_10 Formate dehydrogenase N, transmembrane K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 367.0
BYD1_k127_10423926_11 Prokaryotic cytochrome b561 K00127 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009455 360.0
BYD1_k127_10423926_12 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 310.0
BYD1_k127_10423926_13 phosphoglycerate mutase K15634 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000009766 244.0
BYD1_k127_10423926_14 MreB/Mbl protein K03569 - - 0.0000000000000000000000000000000000000000000000000000005097 199.0
BYD1_k127_10423926_15 - - - - 0.0000000000000000000000000000000000000000000000000002544 198.0
BYD1_k127_10423926_16 Glycine cleavage H-protein - - - 0.0000000000000000000000000000000000000000000000001488 182.0
BYD1_k127_10423926_18 TfoX N-terminal domain - - - 0.000000000000000000000000000000000000000002238 157.0
BYD1_k127_10423926_19 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000001248 160.0
BYD1_k127_10423926_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 8.181e-243 770.0
BYD1_k127_10423926_20 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000007529 144.0
BYD1_k127_10423926_21 DsrE/DsrF-like family - - - 0.000000000000000000000000002399 121.0
BYD1_k127_10423926_22 - - - - 0.000000000000000000000001309 105.0
BYD1_k127_10423926_23 lipolytic protein G-D-S-L family - - - 0.00000000000003297 86.0
BYD1_k127_10423926_24 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000002486 69.0
BYD1_k127_10423926_25 MreB/Mbl protein K03569 - - 0.00000000005176 67.0
BYD1_k127_10423926_26 Cupin domain - - - 0.00004337 46.0
BYD1_k127_10423926_27 Elongation factor SelB, winged helix K03833 - - 0.00006615 51.0
BYD1_k127_10423926_28 Protein of unknown function (DUF2934) - - - 0.000558 50.0
BYD1_k127_10423926_3 Pyridine nucleotide-disulphide oxidoreductase - - - 2.458e-220 691.0
BYD1_k127_10423926_4 Selenocysteine synthase N terminal K01042 - 2.9.1.1 6.914e-202 659.0
BYD1_k127_10423926_5 Putative glycosyl hydrolase domain - - - 5.707e-199 627.0
BYD1_k127_10423926_6 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 575.0
BYD1_k127_10423926_7 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 529.0
BYD1_k127_10423926_8 Domain of unknown function (DUF3391) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006174 467.0
BYD1_k127_10423926_9 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 375.0
BYD1_k127_10471996_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1043.0
BYD1_k127_10471996_1 GTP-binding protein TypA K06207 - - 0.0 1018.0
BYD1_k127_10471996_10 Protein of unknown function (DUF642) - - - 0.000001719 57.0
BYD1_k127_10471996_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 3.02e-300 935.0
BYD1_k127_10471996_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 502.0
BYD1_k127_10471996_4 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 456.0
BYD1_k127_10471996_5 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 364.0
BYD1_k127_10471996_6 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001335 269.0
BYD1_k127_10471996_7 phosphoribosyltransferase K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000001701 241.0
BYD1_k127_10471996_8 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000000000000000000000000000000000000000000000000000002017 212.0
BYD1_k127_10471996_9 Required for chromosome condensation and partitioning K03529 - - 0.0000000000000000000000000004418 113.0
BYD1_k127_10527935_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 1.766e-294 923.0
BYD1_k127_10527935_1 TrkA-C domain K03455 - - 5.688e-213 680.0
BYD1_k127_10527935_10 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001694 428.0
BYD1_k127_10527935_11 abc transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 403.0
BYD1_k127_10527935_12 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 403.0
BYD1_k127_10527935_13 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 408.0
BYD1_k127_10527935_14 Pfam:HipA_N - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 368.0
BYD1_k127_10527935_15 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 355.0
BYD1_k127_10527935_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 337.0
BYD1_k127_10527935_17 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000189 272.0
BYD1_k127_10527935_18 FMN binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000888 270.0
BYD1_k127_10527935_19 Phasin protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000004125 239.0
BYD1_k127_10527935_2 Type II and III secretion system protein K02453 - - 4.924e-211 673.0
BYD1_k127_10527935_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000009822 218.0
BYD1_k127_10527935_21 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000002943 231.0
BYD1_k127_10527935_22 general secretion pathway protein - - - 0.00000000000000000000000000000000000000000000000000000002796 206.0
BYD1_k127_10527935_23 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.0000000000000000000000000000000000000000000000000000247 197.0
BYD1_k127_10527935_24 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000001519 190.0
BYD1_k127_10527935_25 - - - - 0.00000000000000000000000000000000000000000000002527 197.0
BYD1_k127_10527935_26 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000000000000002844 147.0
BYD1_k127_10527935_27 - - - - 0.00000000000000000000000000000004263 134.0
BYD1_k127_10527935_28 - - - - 0.0000000000000000000002658 102.0
BYD1_k127_10527935_29 domain protein - - - 0.000000000002502 81.0
BYD1_k127_10527935_3 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 604.0
BYD1_k127_10527935_30 sequence-specific DNA binding K15773 - - 0.000000000003871 69.0
BYD1_k127_10527935_32 metallopeptidase activity - - - 0.0001936 55.0
BYD1_k127_10527935_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000569 567.0
BYD1_k127_10527935_5 Domain of unknown function (DUF4872) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 543.0
BYD1_k127_10527935_6 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 535.0
BYD1_k127_10527935_7 type II secretion system protein K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006489 527.0
BYD1_k127_10527935_8 PFAM sigma-54 factor interaction domain-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 478.0
BYD1_k127_10527935_9 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 439.0
BYD1_k127_10533044_0 MMPL family K07003 - - 0.0 1227.0
BYD1_k127_10533044_1 Protein of unknown function (DUF1302) - - - 3.295e-208 662.0
BYD1_k127_10533044_10 Dihaem cytochrome c - - - 0.0000000000000000000000000001965 128.0
BYD1_k127_10533044_11 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000009493 107.0
BYD1_k127_10533044_2 His Kinase A (phosphoacceptor) domain K19661 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006033 579.0
BYD1_k127_10533044_3 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003112 491.0
BYD1_k127_10533044_4 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 327.0
BYD1_k127_10533044_5 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 328.0
BYD1_k127_10533044_6 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 286.0
BYD1_k127_10533044_7 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000002765 249.0
BYD1_k127_10533044_8 Predicted metal-dependent hydrolase K07044 - - 0.0000000000000000000000000000000000000000000000000001428 196.0
BYD1_k127_10780500_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 9.414e-258 798.0
BYD1_k127_10780500_1 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 561.0
BYD1_k127_10780500_2 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009962 372.0
BYD1_k127_10780500_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.0000000000000000000000000000000000000000000000000000000000000005332 226.0
BYD1_k127_10780500_4 PFAM Sporulation domain protein - - - 0.000000000000000007347 97.0
BYD1_k127_10780500_5 - - - - 0.0001344 46.0
BYD1_k127_10805677_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1436.0
BYD1_k127_10979779_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1086.0
BYD1_k127_10979779_1 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 8.154e-252 794.0
BYD1_k127_10979779_10 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000252 154.0
BYD1_k127_10979779_11 COG1982 Arginine lysine ornithine decarboxylases K01584 - 4.1.1.19 0.00000000000004331 72.0
BYD1_k127_10979779_2 Glycosyl hydrolase family 57 - - - 8.295e-227 715.0
BYD1_k127_10979779_3 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 5.88e-196 616.0
BYD1_k127_10979779_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 595.0
BYD1_k127_10979779_5 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 507.0
BYD1_k127_10979779_6 Histidine kinase K19693 - - 0.000000000000000000000000000000000000000000000000000000000000000337 233.0
BYD1_k127_10979779_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000002578 210.0
BYD1_k127_10979779_8 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.000000000000000000000000000000000000000000000000001023 198.0
BYD1_k127_10979779_9 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000001323 175.0
BYD1_k127_11012749_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1699.0
BYD1_k127_11012749_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.167e-227 711.0
BYD1_k127_11012749_10 Mg2 and Co2 transporter CorC K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005477 402.0
BYD1_k127_11012749_11 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 377.0
BYD1_k127_11012749_12 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 349.0
BYD1_k127_11012749_13 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 328.0
BYD1_k127_11012749_14 Domain of unknown function (DUF309) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002246 237.0
BYD1_k127_11012749_15 imidazoleglycerol-phosphate synthase activity - - - 0.000000000000000000000000000000000000000000000000000000001106 208.0
BYD1_k127_11012749_16 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000000000003178 193.0
BYD1_k127_11012749_17 4Fe-4S dicluster domain - - - 0.000000002205 62.0
BYD1_k127_11012749_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 5.68e-215 692.0
BYD1_k127_11012749_3 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 516.0
BYD1_k127_11012749_4 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002302 499.0
BYD1_k127_11012749_5 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 486.0
BYD1_k127_11012749_6 phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 475.0
BYD1_k127_11012749_7 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 451.0
BYD1_k127_11012749_8 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 416.0
BYD1_k127_11012749_9 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002757 417.0
BYD1_k127_1105139_0 Oligopeptidase K01414 - 3.4.24.70 0.0 1039.0
BYD1_k127_1105139_1 aldehyde ferredoxin oxidoreductase activity K03738 - 1.2.7.5 6.073e-308 950.0
BYD1_k127_1105139_10 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006974 511.0
BYD1_k127_1105139_11 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 503.0
BYD1_k127_1105139_12 Cysteine-rich domain K00113 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 480.0
BYD1_k127_1105139_13 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 468.0
BYD1_k127_1105139_14 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 458.0
BYD1_k127_1105139_15 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003808 449.0
BYD1_k127_1105139_16 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 457.0
BYD1_k127_1105139_17 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 411.0
BYD1_k127_1105139_18 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 396.0
BYD1_k127_1105139_19 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006192 360.0
BYD1_k127_1105139_2 Transcriptional activator of acetoin glycerol metabolism K21405 - - 6.491e-293 911.0
BYD1_k127_1105139_20 UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 344.0
BYD1_k127_1105139_21 Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009652 316.0
BYD1_k127_1105139_22 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 308.0
BYD1_k127_1105139_23 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 306.0
BYD1_k127_1105139_24 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000002322 217.0
BYD1_k127_1105139_26 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000003271 148.0
BYD1_k127_1105139_27 Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors K12973 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009279,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016409,GO:0016416,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044462,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.251 0.0000000000000000000000000000000000001627 150.0
BYD1_k127_1105139_28 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.00000000000000000000000000003538 120.0
BYD1_k127_1105139_29 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.00000000000000000000000000005537 119.0
BYD1_k127_1105139_3 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1.995e-256 800.0
BYD1_k127_1105139_30 Belongs to the transcriptional regulatory Fis family K03557 - - 0.000000000000000000000000001486 120.0
BYD1_k127_1105139_31 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000007244 111.0
BYD1_k127_1105139_33 4Fe-4S binding domain - - - 0.00000000000000001043 85.0
BYD1_k127_1105139_34 Type II restriction endonuclease EcoO109I - - - 0.000000000000002359 87.0
BYD1_k127_1105139_35 Mut7-C ubiquitin - - - 0.0000000004979 63.0
BYD1_k127_1105139_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 3.615e-248 787.0
BYD1_k127_1105139_5 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 1.673e-217 679.0
BYD1_k127_1105139_6 aminopeptidase K01262 - 3.4.11.9 1.886e-198 627.0
BYD1_k127_1105139_7 C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 1.955e-195 619.0
BYD1_k127_1105139_8 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 600.0
BYD1_k127_1105139_9 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004265 540.0
BYD1_k127_11088818_0 SIR2-like domain - - - 0.0 2048.0
BYD1_k127_11088818_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1508.0
BYD1_k127_11088818_10 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000004196 171.0
BYD1_k127_11088818_11 MMPL family - - - 0.00000000000000000000000000000000005428 135.0
BYD1_k127_11088818_2 Hsp90 protein K04079 - - 0.0 1036.0
BYD1_k127_11088818_3 serine threonine protein kinase - - - 1.483e-299 942.0
BYD1_k127_11088818_4 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009949 495.0
BYD1_k127_11088818_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001685 279.0
BYD1_k127_11088818_6 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001751 260.0
BYD1_k127_11088818_7 Domain of unknown function (DUF4337) - - - 0.000000000000000000000000000000000000000000000000000000000000000000007939 242.0
BYD1_k127_11088818_8 Acetyltransferase (GNAT) domain K03829 - - 0.000000000000000000000000000000000000000000000000000000000000000005789 228.0
BYD1_k127_11088818_9 G T U mismatch-specific DNA glycosylase K03649 - 3.2.2.28 0.0000000000000000000000000000000000000000000000000000000000004569 214.0
BYD1_k127_11481876_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1493.0
BYD1_k127_11481876_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.358e-251 782.0
BYD1_k127_11481876_10 - - - - 0.0000000000000000000000000000000000579 137.0
BYD1_k127_11481876_11 - - - - 0.000000000000000000000000003475 116.0
BYD1_k127_11481876_12 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10126 - - 0.00000000007154 69.0
BYD1_k127_11481876_2 domain, Protein - - - 9.057e-229 730.0
BYD1_k127_11481876_3 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 8.137e-197 624.0
BYD1_k127_11481876_4 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 449.0
BYD1_k127_11481876_5 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 406.0
BYD1_k127_11481876_6 Extracellular solute-binding protein K02027,K05813 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002906 254.0
BYD1_k127_11481876_7 glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000006058 198.0
BYD1_k127_11481876_8 Toxic component of a toxin-antitoxin (TA) module. An RNase K18828 - - 0.00000000000000000000000000000000000000000000000001267 188.0
BYD1_k127_11506954_0 nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC K02567 - - 0.0 1509.0
BYD1_k127_11506954_1 domain, Protein - - - 1.362e-237 751.0
BYD1_k127_11506954_10 Transcriptional regulator K13635 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005692 426.0
BYD1_k127_11506954_11 MauM NapG family ferredoxin-type protein K02573 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 415.0
BYD1_k127_11506954_12 PFAM NapC NirT cytochrome c K02569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003039 314.0
BYD1_k127_11506954_13 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000518 319.0
BYD1_k127_11506954_14 Belongs to the heme-copper respiratory oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 312.0
BYD1_k127_11506954_15 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002052 272.0
BYD1_k127_11506954_16 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004463 269.0
BYD1_k127_11506954_17 Crp Fnr family transcriptional regulator K21563 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000368 270.0
BYD1_k127_11506954_18 Type VI secretion system (T6SS), amidase effector protein 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000008365 228.0
BYD1_k127_11506954_19 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.0000000000000000000000000000000000000000000000000000000000003598 216.0
BYD1_k127_11506954_2 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 557.0
BYD1_k127_11506954_20 periplasmic or secreted lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000001592 225.0
BYD1_k127_11506954_21 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.00000000000000000000000000000000000000000000000000002684 192.0
BYD1_k127_11506954_22 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000001749 188.0
BYD1_k127_11506954_23 - - - - 0.00000000000000000000000000000000000000000000004335 172.0
BYD1_k127_11506954_24 MEKHLA domain - - - 0.000000000000000000000000000000000000000000004948 168.0
BYD1_k127_11506954_25 HIRAN - - - 0.00000000000000000000000000000000000004214 149.0
BYD1_k127_11506954_26 Hemerythrin HHE cation binding - - - 0.0000000000000000000000000000000004205 139.0
BYD1_k127_11506954_27 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000001132 117.0
BYD1_k127_11506954_28 - - - - 0.00000000000000001591 90.0
BYD1_k127_11506954_29 protein involved in formation of periplasmic nitrate reductase K02570 - - 0.000000000000002899 82.0
BYD1_k127_11506954_3 Sulfate ABC transporter, sulfate-binding protein K02048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008845 541.0
BYD1_k127_11506954_30 conserved protein (DUF2249) - - - 0.00000000003579 66.0
BYD1_k127_11506954_31 - - - - 0.00000001305 59.0
BYD1_k127_11506954_4 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 541.0
BYD1_k127_11506954_5 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 458.0
BYD1_k127_11506954_6 TIGRFAM sulfate ABC transporter, permease protein CysW, sulfate ABC transporter, permease protein K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 439.0
BYD1_k127_11506954_7 sulfate ABC transporter, inner membrane subunit CysT K02046,K15496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009831 423.0
BYD1_k127_11506954_8 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 430.0
BYD1_k127_11506954_9 4Fe-4S binding domain K02574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 419.0
BYD1_k127_11786394_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1060.0
BYD1_k127_11786394_1 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.625e-291 907.0
BYD1_k127_11786394_10 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000008961 175.0
BYD1_k127_11786394_11 PFAM regulatory protein MerR - - - 0.0000000000000000000000000000000000000000000001447 170.0
BYD1_k127_11786394_12 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000000001913 99.0
BYD1_k127_11786394_13 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000001837 64.0
BYD1_k127_11786394_15 - - - - 0.000001553 52.0
BYD1_k127_11786394_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 4.977e-262 816.0
BYD1_k127_11786394_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009473 581.0
BYD1_k127_11786394_4 Diguanylate cyclase phosphodiesterase with PAS PAC K21023 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004357 564.0
BYD1_k127_11786394_5 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 445.0
BYD1_k127_11786394_6 Chalcone isomerase-like - - - 0.00000000000000000000000000000000000000000000000000000000001756 214.0
BYD1_k127_11786394_7 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000000002282 207.0
BYD1_k127_11786394_8 transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000001436 201.0
BYD1_k127_11786394_9 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000000001523 177.0
BYD1_k127_11795391_0 C-terminal, D2-small domain, of ClpB protein K03694 - - 0.0 1212.0
BYD1_k127_11795391_1 UPF0313 protein - - - 0.0 1090.0
BYD1_k127_11795391_10 part of a sulfur-relay system K11179 - - 0.0000000000000000000000000000000000000008021 151.0
BYD1_k127_11795391_11 Cold shock K03704 - - 0.0000000000000000000000000000000001793 136.0
BYD1_k127_11795391_12 Glycine-zipper domain - - - 0.000000000000000000000000000000719 129.0
BYD1_k127_11795391_13 - - - - 0.0000000000000000000002008 99.0
BYD1_k127_11795391_14 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.000000000000000000000303 96.0
BYD1_k127_11795391_15 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000000000000000005527 93.0
BYD1_k127_11795391_2 Isocitrate dehydrogenase K00031 - 1.1.1.42 6.724e-274 844.0
BYD1_k127_11795391_3 filamentation induced by cAMP protein Fic - - - 3.387e-217 677.0
BYD1_k127_11795391_4 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 590.0
BYD1_k127_11795391_5 NADH flavin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 576.0
BYD1_k127_11795391_6 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 546.0
BYD1_k127_11795391_7 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 294.0
BYD1_k127_11795391_8 Methyltransferase small domain K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000486 299.0
BYD1_k127_11795391_9 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000003291 162.0
BYD1_k127_12010969_0 ABC transporter transmembrane region K06147 - - 9.534e-286 882.0
BYD1_k127_12010969_1 Sigma-54 interaction domain - - - 2.632e-242 757.0
BYD1_k127_12010969_10 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007067 431.0
BYD1_k127_12010969_11 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008858 413.0
BYD1_k127_12010969_12 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 424.0
BYD1_k127_12010969_13 Alpha/beta hydrolase of unknown function (DUF900) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 405.0
BYD1_k127_12010969_14 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 391.0
BYD1_k127_12010969_15 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000577 391.0
BYD1_k127_12010969_16 Belongs to the short-chain dehydrogenases reductases (SDR) family K14189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 380.0
BYD1_k127_12010969_17 Hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 370.0
BYD1_k127_12010969_18 Pfam:UPF0118 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003821 358.0
BYD1_k127_12010969_19 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000117 285.0
BYD1_k127_12010969_2 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 3.375e-219 687.0
BYD1_k127_12010969_20 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000852 290.0
BYD1_k127_12010969_21 Nad-dependent epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001499 259.0
BYD1_k127_12010969_22 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000002139 222.0
BYD1_k127_12010969_23 Domain of unknown function (DUF1854) - - - 0.00000000000000000000000000000000000000000000000000000000000002407 219.0
BYD1_k127_12010969_24 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000000000002396 211.0
BYD1_k127_12010969_25 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000000000000000001239 221.0
BYD1_k127_12010969_26 protein conserved in bacteria K09922 - - 0.00000000000000000000000000000000000000000000000000000001987 200.0
BYD1_k127_12010969_27 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000005537 192.0
BYD1_k127_12010969_28 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000000000000000000000000005798 194.0
BYD1_k127_12010969_29 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.00000000000000000000000000000000000000000000000915 180.0
BYD1_k127_12010969_3 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 7.468e-197 625.0
BYD1_k127_12010969_30 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000001437 170.0
BYD1_k127_12010969_31 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000002482 173.0
BYD1_k127_12010969_32 - - - - 0.000000000000000000000000000000000000007661 151.0
BYD1_k127_12010969_33 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000002824 149.0
BYD1_k127_12010969_34 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000002834 119.0
BYD1_k127_12010969_35 - - - - 0.0000000000000000000000000002224 116.0
BYD1_k127_12010969_36 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000000273 98.0
BYD1_k127_12010969_37 Ferredoxin K04755 - - 0.00000000000485 76.0
BYD1_k127_12010969_4 DNA mismatch repair protein, C-terminal domain K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 622.0
BYD1_k127_12010969_5 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 553.0
BYD1_k127_12010969_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 529.0
BYD1_k127_12010969_7 Alanine racemase, C-terminal domain K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 514.0
BYD1_k127_12010969_8 mechanosensitive K05802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 484.0
BYD1_k127_12010969_9 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008714 439.0
BYD1_k127_12104673_0 AcrB/AcrD/AcrF family - - - 0.0 1558.0
BYD1_k127_12104673_1 Methylmalonyl-CoA mutase large subunit K01847 - 5.4.99.2 0.0 1157.0
BYD1_k127_12104673_10 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 534.0
BYD1_k127_12104673_11 amino acid K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 523.0
BYD1_k127_12104673_12 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008226 484.0
BYD1_k127_12104673_13 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002806 464.0
BYD1_k127_12104673_14 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 466.0
BYD1_k127_12104673_15 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 442.0
BYD1_k127_12104673_16 signal transduction protein containing EAL and modified HD-GYP domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 426.0
BYD1_k127_12104673_17 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 406.0
BYD1_k127_12104673_18 Neutral zinc metallopeptidase K07054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003581 381.0
BYD1_k127_12104673_19 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066 379.0
BYD1_k127_12104673_2 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1019.0
BYD1_k127_12104673_20 branched-chain amino acid K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 371.0
BYD1_k127_12104673_21 Protein of unknown function (DUF1016) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 349.0
BYD1_k127_12104673_22 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005609 328.0
BYD1_k127_12104673_23 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 331.0
BYD1_k127_12104673_24 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000742 307.0
BYD1_k127_12104673_25 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 295.0
BYD1_k127_12104673_26 Lactoylglutathione lyase K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 293.0
BYD1_k127_12104673_27 transcriptional - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001543 277.0
BYD1_k127_12104673_28 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000002832 223.0
BYD1_k127_12104673_29 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000001105 201.0
BYD1_k127_12104673_3 carboxylase K01965 - 6.4.1.3 0.0 1014.0
BYD1_k127_12104673_30 - - - - 0.000000000000000000000000000000000000000000000001766 184.0
BYD1_k127_12104673_31 integral membrane protein K02221 - - 0.00000000000000000000000000000000000000000000001594 178.0
BYD1_k127_12104673_32 - - - - 0.000000000000000000000000000000000000000000587 166.0
BYD1_k127_12104673_33 - - - - 0.00000000000000000000000000000000000000009704 161.0
BYD1_k127_12104673_34 Cytochrome c K08738 - - 0.00000000000000000000000000002817 120.0
BYD1_k127_12104673_35 DUF167 K09131 - - 0.00000000000000000000000009613 116.0
BYD1_k127_12104673_37 PIN domain K07065 - - 0.00000000000000003411 87.0
BYD1_k127_12104673_38 - - - - 0.0000000000000002601 81.0
BYD1_k127_12104673_39 COG0695 Glutaredoxin and related proteins - - - 0.00005792 53.0
BYD1_k127_12104673_4 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 1.031e-304 937.0
BYD1_k127_12104673_40 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.00007211 49.0
BYD1_k127_12104673_5 pyridine nucleotide-disulphide oxidoreductase K17218 GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005515,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0042802,GO:0044237,GO:0045333,GO:0055114 1.8.5.4 6.01e-220 691.0
BYD1_k127_12104673_6 twitching motility protein K02670 - - 4.485e-206 647.0
BYD1_k127_12104673_7 twitching motility protein K02669 - - 1.84e-199 624.0
BYD1_k127_12104673_8 COG0044 Dihydroorotase and related cyclic amidohydrolases K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 574.0
BYD1_k127_12104673_9 Putative diguanylate phosphodiesterase K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005427 567.0
BYD1_k127_1265998_0 His Kinase A (phosphoacceptor) domain - - - 0.0 1534.0
BYD1_k127_1265998_1 acetamidase formamidase K01455 - 3.5.1.49 1.376e-253 784.0
BYD1_k127_1265998_10 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 469.0
BYD1_k127_1265998_11 urea ABC transporter, ATP-binding protein K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 453.0
BYD1_k127_1265998_12 ABC transporter, ATP-binding protein K11963 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 418.0
BYD1_k127_1265998_13 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 363.0
BYD1_k127_1265998_14 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 289.0
BYD1_k127_1265998_15 Acyl carrier protein phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007273 253.0
BYD1_k127_1265998_16 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009716 267.0
BYD1_k127_1265998_17 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004827 254.0
BYD1_k127_1265998_18 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000003431 205.0
BYD1_k127_1265998_19 methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000365 208.0
BYD1_k127_1265998_2 Urea ABC transporter, urea binding protein K11959 - - 8.842e-252 780.0
BYD1_k127_1265998_20 IS66 Orf2 like protein K07484 - - 0.00000000000000000000000000000000000000000001934 169.0
BYD1_k127_1265998_21 TIGRFAM regulatory protein, FmdB family - - - 0.00000000000000000000000000000000000005611 160.0
BYD1_k127_1265998_22 4Fe-4S binding domain - - - 0.000000000000000000000000000000000001299 138.0
BYD1_k127_1265998_23 Cupin domain K11312 - - 0.000000000000000000000000000001481 137.0
BYD1_k127_1265998_24 transferase activity, transferring acyl groups K03824 - - 0.0000000000000000007473 98.0
BYD1_k127_1265998_25 PFAM transposase IS3 IS911 family protein K07483 - - 0.00000000000000007525 85.0
BYD1_k127_1265998_26 - - - - 0.00000002547 66.0
BYD1_k127_1265998_27 Belongs to the 'phage' integrase family - - - 0.000729 44.0
BYD1_k127_1265998_3 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 2.847e-236 754.0
BYD1_k127_1265998_4 Carbon-nitrogen hydrolase K01426 - 3.5.1.4 2.211e-208 649.0
BYD1_k127_1265998_5 Belongs to the binding-protein-dependent transport system permease family K11961 - - 1e-204 642.0
BYD1_k127_1265998_6 PFAM Transposase IS66 family K07484 - - 4.503e-204 649.0
BYD1_k127_1265998_7 Belongs to the peptidase M16 family K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 593.0
BYD1_k127_1265998_8 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002958 541.0
BYD1_k127_1265998_9 Peptidase M16 K07263 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000493 509.0
BYD1_k127_14294_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0 1041.0
BYD1_k127_14294_1 Cysteine-rich domain - - - 5.258e-284 884.0
BYD1_k127_14294_10 response regulator K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001162 280.0
BYD1_k127_14294_11 TIGRFAM sulfur relay protein TusD DsrE K07235 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0019417,GO:0044237,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000005715 235.0
BYD1_k127_14294_12 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000000000005797 192.0
BYD1_k127_14294_13 DsrE/DsrF-like family K07236 - - 0.0000000000000000000000000000000000000000000000000004368 186.0
BYD1_k127_14294_14 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000005737 190.0
BYD1_k127_14294_15 - - - - 0.000000000000000000000000000000007512 131.0
BYD1_k127_14294_16 DsrH like protein K07237 - - 0.000000000000000000000000000001802 128.0
BYD1_k127_14294_17 - - - - 0.00000000000000000000000003542 113.0
BYD1_k127_14294_18 Iron-sulphur cluster biosynthesis K13628 - - 0.0000000000000000000000004931 109.0
BYD1_k127_14294_19 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 0.00000000000000000000001989 98.0
BYD1_k127_14294_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 610.0
BYD1_k127_14294_20 Type IV pili methyl-accepting chemotaxis transducer N-term K07673 - 2.7.13.3 0.00000003183 56.0
BYD1_k127_14294_3 Polysulphide reductase, NrfD K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 503.0
BYD1_k127_14294_4 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003208 470.0
BYD1_k127_14294_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 365.0
BYD1_k127_14294_6 Prolyl 4-hydroxylase, alpha subunit K00472 - 1.14.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 355.0
BYD1_k127_14294_7 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 357.0
BYD1_k127_14294_8 Nitrate reductase gamma subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 347.0
BYD1_k127_14294_9 PFAM N-acetylmuramoyl-L-alanine amidase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006517 286.0
BYD1_k127_1722589_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 6.413e-219 690.0
BYD1_k127_1722589_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 5.43e-209 658.0
BYD1_k127_1722589_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 505.0
BYD1_k127_1722589_3 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 345.0
BYD1_k127_1722589_4 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 326.0
BYD1_k127_1722589_5 VacJ family lipoprotein K04754 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 307.0
BYD1_k127_1722589_6 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009346 246.0
BYD1_k127_1722589_7 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000002385 233.0
BYD1_k127_1722589_8 STAS domain K07122 - - 0.000000000000002581 81.0
BYD1_k127_1722589_9 Permease MlaE K02066 - - 0.0000002199 52.0
BYD1_k127_1724342_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K12276 - - 2.565e-272 847.0
BYD1_k127_1724342_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 3.809e-254 796.0
BYD1_k127_1724342_10 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 448.0
BYD1_k127_1724342_11 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008577 430.0
BYD1_k127_1724342_12 Transcriptional regulator, LysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 407.0
BYD1_k127_1724342_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008229 413.0
BYD1_k127_1724342_14 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 391.0
BYD1_k127_1724342_15 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002731 396.0
BYD1_k127_1724342_16 peptidase, M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 327.0
BYD1_k127_1724342_17 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 289.0
BYD1_k127_1724342_18 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 282.0
BYD1_k127_1724342_19 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000539 264.0
BYD1_k127_1724342_2 Concanavalin A-like lectin/glucanases superfamily K12287 - - 2.624e-250 818.0
BYD1_k127_1724342_20 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001359 249.0
BYD1_k127_1724342_21 Prokaryotic N-terminal methylation motif K12285 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006662 248.0
BYD1_k127_1724342_22 Lysine methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001261 249.0
BYD1_k127_1724342_23 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003 240.0
BYD1_k127_1724342_24 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 GO:0001510,GO:0002128,GO:0002130,GO:0002131,GO:0002132,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016427,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052665,GO:0052666,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.207 0.000000000000000000000000000000000000000000000000000000000000000000181 234.0
BYD1_k127_1724342_25 Pilus assembly protein K12279 - - 0.000000000000000000000000000000000000000000000000000000000000004671 229.0
BYD1_k127_1724342_26 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000000000000022 211.0
BYD1_k127_1724342_27 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000000000000000000000000000001684 185.0
BYD1_k127_1724342_28 transcriptional - - - 0.00000000000000000000000000000000000000000000001328 177.0
BYD1_k127_1724342_29 - - - - 0.000000000000000000000000000000000000000000001464 171.0
BYD1_k127_1724342_3 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.206e-229 717.0
BYD1_k127_1724342_30 Prokaryotic N-terminal methylation motif K10924 - - 0.00000000000000000000000000000000000000002839 158.0
BYD1_k127_1724342_31 type IV pilus modification protein PilV K10927 - - 0.0000000000000000000000000000000000000002613 154.0
BYD1_k127_1724342_32 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000003899 152.0
BYD1_k127_1724342_33 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000001195 148.0
BYD1_k127_1724342_34 Type II secretion system (T2SS), protein M K12280 - - 0.0000000000000000000000000000000000003684 157.0
BYD1_k127_1724342_35 Bacterial SH3 domain - - - 0.000000000000000000000000000000000002575 147.0
BYD1_k127_1724342_36 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000000003156 154.0
BYD1_k127_1724342_37 - - - - 0.0000000000000000000000000000000000403 148.0
BYD1_k127_1724342_38 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000000008341 130.0
BYD1_k127_1724342_39 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000000894 137.0
BYD1_k127_1724342_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 2.822e-210 663.0
BYD1_k127_1724342_40 PFAM Fimbrial assembly family protein - - - 0.00000000000000000000000000003029 130.0
BYD1_k127_1724342_41 Transcriptional regulator - - - 0.000000000000000000001016 98.0
BYD1_k127_1724342_42 Pilus assembly protein PilX - - - 0.0000000000000000001447 95.0
BYD1_k127_1724342_43 - - - - 0.0000000000000000003389 93.0
BYD1_k127_1724342_44 Prokaryotic N-terminal methylation motif K10924 - - 0.000000000000000001269 96.0
BYD1_k127_1724342_45 - K12281 - - 0.0000000002626 72.0
BYD1_k127_1724342_46 Tfp pilus assembly protein FimT K10926 - - 0.000000004924 65.0
BYD1_k127_1724342_5 modulator of DNA gyrase K03592 - - 8.038e-201 641.0
BYD1_k127_1724342_6 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008189 578.0
BYD1_k127_1724342_7 Type II secretion system (T2SS), protein F K02455,K12278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006543 570.0
BYD1_k127_1724342_8 Secretin N-terminal domain K02453,K12282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008474 548.0
BYD1_k127_1724342_9 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007703 527.0
BYD1_k127_1779582_0 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1015.0
BYD1_k127_1779582_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 3.927e-247 766.0
BYD1_k127_1779582_10 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 433.0
BYD1_k127_1779582_11 Glycosyltransferase Family 4 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 435.0
BYD1_k127_1779582_12 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 432.0
BYD1_k127_1779582_13 Phosphonate metabolism K06162 - 3.6.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 445.0
BYD1_k127_1779582_14 phosphonate C-P lyase system protein PhnK K05781 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 386.0
BYD1_k127_1779582_15 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 333.0
BYD1_k127_1779582_16 Carbon-phosphorus lyase complex subunit PhnI K06164 - 2.7.8.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 317.0
BYD1_k127_1779582_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005675 313.0
BYD1_k127_1779582_18 Phosphonate C-P lyase system protein PhnL K05780 - 2.7.8.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 293.0
BYD1_k127_1779582_19 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 289.0
BYD1_k127_1779582_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 1.529e-240 749.0
BYD1_k127_1779582_20 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001559 261.0
BYD1_k127_1779582_21 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001481 247.0
BYD1_k127_1779582_22 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000002304 213.0
BYD1_k127_1779582_23 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000000000000000000000002531 181.0
BYD1_k127_1779582_25 preprotein translocase K03075 - - 0.0000000000000000000000000000000000000001318 154.0
BYD1_k127_1779582_26 FR47-like protein - - - 0.0000000000000000000000000000009839 127.0
BYD1_k127_1779582_3 PFAM transposase mutator type K07493 - - 7.441e-227 707.0
BYD1_k127_1779582_4 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 532.0
BYD1_k127_1779582_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 526.0
BYD1_k127_1779582_6 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 498.0
BYD1_k127_1779582_7 Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose K06163 - 4.7.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006094 488.0
BYD1_k127_1779582_8 Zinc carboxypeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 475.0
BYD1_k127_1779582_9 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 445.0
BYD1_k127_1806964_0 Protein of unknown function (DUF1595) - - - 1.778e-317 1002.0
BYD1_k127_1806964_1 Acyl-CoA dehydrogenase N terminal K20035 - - 3.188e-231 730.0
BYD1_k127_1806964_10 Rieske [2Fe-2S] domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 560.0
BYD1_k127_1806964_11 Belongs to the glycosyl hydrolase 18 family K01183 - 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 569.0
BYD1_k127_1806964_12 Extracellular liganD-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 548.0
BYD1_k127_1806964_13 Tat (Twin-arginine translocation) pathway signal sequence domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009774 541.0
BYD1_k127_1806964_14 protein conserved in bacteria K16514 GO:0003674,GO:0003824,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0042537,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 5.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004681 534.0
BYD1_k127_1806964_15 PFAM Amidohydrolase 2 K10221 - 3.1.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000809 526.0
BYD1_k127_1806964_16 Domain of unknown function (DUF3391) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 529.0
BYD1_k127_1806964_17 Tat (Twin-arginine translocation) pathway signal sequence domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002862 527.0
BYD1_k127_1806964_18 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 499.0
BYD1_k127_1806964_19 PFAM Alcohol dehydrogenase zinc-binding domain protein K12957 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009274 486.0
BYD1_k127_1806964_2 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 3.811e-211 672.0
BYD1_k127_1806964_20 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 478.0
BYD1_k127_1806964_21 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 462.0
BYD1_k127_1806964_22 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 455.0
BYD1_k127_1806964_23 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 452.0
BYD1_k127_1806964_24 Hsp70 protein K04046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 444.0
BYD1_k127_1806964_25 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002982 439.0
BYD1_k127_1806964_26 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 429.0
BYD1_k127_1806964_27 Extracellular liganD-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 417.0
BYD1_k127_1806964_28 PFAM Dimethylmenaquinone methyltransferase K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 392.0
BYD1_k127_1806964_29 branched-chain amino acid K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 381.0
BYD1_k127_1806964_3 Domain of unknown function (DUF802) - - - 4.602e-206 655.0
BYD1_k127_1806964_30 bacterial-type flagellum-dependent cell motility K15923 - 3.2.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 396.0
BYD1_k127_1806964_31 Cellulase (glycosyl hydrolase family 5) K01218 - 3.2.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 398.0
BYD1_k127_1806964_32 Transcriptional regulator K19338 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 370.0
BYD1_k127_1806964_33 PFAM amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 374.0
BYD1_k127_1806964_34 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 365.0
BYD1_k127_1806964_35 ABC-type branched-chain amino acid transport K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 358.0
BYD1_k127_1806964_36 OmpA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 352.0
BYD1_k127_1806964_37 Pterin binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 353.0
BYD1_k127_1806964_38 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 357.0
BYD1_k127_1806964_39 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 340.0
BYD1_k127_1806964_4 Amidohydrolase K10220 - 4.2.1.83 4.775e-203 638.0
BYD1_k127_1806964_40 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 327.0
BYD1_k127_1806964_41 COG0778 Nitroreductase K10679 - 1.5.1.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 312.0
BYD1_k127_1806964_42 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K21832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009522 318.0
BYD1_k127_1806964_43 Methionine synthase B12-binding module cap domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 302.0
BYD1_k127_1806964_44 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007212 312.0
BYD1_k127_1806964_45 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 292.0
BYD1_k127_1806964_46 response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001875 276.0
BYD1_k127_1806964_47 - - - - 0.00000000000000000000000000000000000000000000000000000000000001644 236.0
BYD1_k127_1806964_48 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000000000000000000000000000000000000000000000001138 220.0
BYD1_k127_1806964_49 Protein of unknown function (DUF3348) - - - 0.000000000000000000000000000000000000000000000000000000000001562 218.0
BYD1_k127_1806964_5 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 606.0
BYD1_k127_1806964_50 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000479 185.0
BYD1_k127_1806964_51 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.0000000000000000000000000000000000000000006639 161.0
BYD1_k127_1806964_52 Regulatory protein MarR - - - 0.00000000000000000000000000000000000000001968 158.0
BYD1_k127_1806964_53 Hemerythrin HHE cation binding - - - 0.000000000000000000000000000000000000004177 153.0
BYD1_k127_1806964_54 Protein of unknown function (DUF2894) - - - 0.00000000000000000000000000000000005066 142.0
BYD1_k127_1806964_55 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000000557 141.0
BYD1_k127_1806964_56 Phosphate-starvation-inducible E - - - 0.000000000000000000000000000008781 119.0
BYD1_k127_1806964_57 methionine synthase K00548 - 2.1.1.13 0.00000000000000000000000003794 116.0
BYD1_k127_1806964_58 - - - - 0.0000000000000000000001355 104.0
BYD1_k127_1806964_59 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.000000000000000000031 98.0
BYD1_k127_1806964_6 COG1455 Phosphotransferase system cellobiose-specific component IIC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 596.0
BYD1_k127_1806964_60 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000006031 91.0
BYD1_k127_1806964_61 S4 domain K14761 - - 0.00000005072 57.0
BYD1_k127_1806964_62 - - - - 0.00001409 51.0
BYD1_k127_1806964_7 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000755 577.0
BYD1_k127_1806964_8 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007793 583.0
BYD1_k127_1806964_9 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 579.0
BYD1_k127_1811066_0 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 460.0
BYD1_k127_1811066_1 Domain of unknown function (DUF4062) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 404.0
BYD1_k127_1811066_10 - - - - 0.000000000000549 76.0
BYD1_k127_1811066_11 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000004695 67.0
BYD1_k127_1811066_12 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000228 55.0
BYD1_k127_1811066_2 AAA domain K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 345.0
BYD1_k127_1811066_3 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000002301 257.0
BYD1_k127_1811066_4 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001359 246.0
BYD1_k127_1811066_5 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000125 208.0
BYD1_k127_1811066_6 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000007617 197.0
BYD1_k127_1811066_7 - - - - 0.00000000000000000000000000000000000000000007866 164.0
BYD1_k127_1811066_8 Tetratricopeptide repeat K12284 - - 0.00000000000000000000001682 112.0
BYD1_k127_1845818_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 5.63e-314 977.0
BYD1_k127_1845818_1 ABC transporter transmembrane region K06147 - - 1.478e-289 898.0
BYD1_k127_1845818_10 - - - - 0.0000000000000000000000000000000000000000000000000006358 189.0
BYD1_k127_1845818_11 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000001848 151.0
BYD1_k127_1845818_12 - - - - 0.00000000000000000000000000000000000002069 147.0
BYD1_k127_1845818_13 Tetratricopeptide repeat - - - 0.00000000000000000000000000007593 126.0
BYD1_k127_1845818_14 SET domain K07117 - - 0.0000000000000000000008934 104.0
BYD1_k127_1845818_15 HemY domain protein K01406 - 3.4.24.40 0.0000000000002065 86.0
BYD1_k127_1845818_16 DNA-templated transcription, initiation K03088 - - 0.00005936 47.0
BYD1_k127_1845818_2 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003535 574.0
BYD1_k127_1845818_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 559.0
BYD1_k127_1845818_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008893 420.0
BYD1_k127_1845818_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 340.0
BYD1_k127_1845818_6 Flavodoxin-like fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002505 322.0
BYD1_k127_1845818_7 TonB C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003094 263.0
BYD1_k127_1845818_8 Phage Tail Collar Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000005905 239.0
BYD1_k127_1845818_9 PFAM GCN5-related N-acetyltransferase K03824 - - 0.00000000000000000000000000000000000000000000000000004391 188.0
BYD1_k127_2011248_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1506.0
BYD1_k127_2011248_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1016.0
BYD1_k127_2011248_10 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008369 422.0
BYD1_k127_2011248_11 Belongs to the CarB family K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009822 365.0
BYD1_k127_2011248_12 Domain of unknown function (DUF1837) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 364.0
BYD1_k127_2011248_13 dihydropteroate synthase K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007844 359.0
BYD1_k127_2011248_14 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 359.0
BYD1_k127_2011248_15 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 354.0
BYD1_k127_2011248_16 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005994 339.0
BYD1_k127_2011248_17 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system K02041 - 3.6.3.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009527 332.0
BYD1_k127_2011248_18 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 301.0
BYD1_k127_2011248_19 phosphonate ABC transporter, periplasmic phosphonate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001022 279.0
BYD1_k127_2011248_2 helicase superfamily c-terminal domain - - - 2.465e-311 967.0
BYD1_k127_2011248_20 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002182 274.0
BYD1_k127_2011248_21 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001659 276.0
BYD1_k127_2011248_22 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001448 257.0
BYD1_k127_2011248_23 Pas domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000178 205.0
BYD1_k127_2011248_24 RNA-binding protein containing KH domain possibly ribosomal protein - - - 0.000000000000000000000000000000000002062 141.0
BYD1_k127_2011248_25 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000000000000004722 136.0
BYD1_k127_2011248_3 transport system, permease and ATPase K02471 - - 3.532e-261 820.0
BYD1_k127_2011248_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 2.161e-220 691.0
BYD1_k127_2011248_5 Histidine kinase - - - 4.08e-205 678.0
BYD1_k127_2011248_6 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 600.0
BYD1_k127_2011248_7 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 427.0
BYD1_k127_2011248_8 Calcineurin-like phosphoesterase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006512 416.0
BYD1_k127_2011248_9 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 413.0
BYD1_k127_2024956_0 FAD linked oxidase - - - 0.0 1960.0
BYD1_k127_2024956_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1504.0
BYD1_k127_2024956_10 Bacterial periplasmic substrate-binding proteins K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 473.0
BYD1_k127_2024956_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 465.0
BYD1_k127_2024956_12 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007049 466.0
BYD1_k127_2024956_13 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002784 457.0
BYD1_k127_2024956_14 ABC-type polar amino acid transport system, ATPase component K10004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 434.0
BYD1_k127_2024956_15 Outer membrane efflux protein K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 432.0
BYD1_k127_2024956_16 Mate efflux family protein K03327 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 429.0
BYD1_k127_2024956_17 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009005 405.0
BYD1_k127_2024956_18 Binding-protein-dependent transport system inner membrane component K10003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000184 381.0
BYD1_k127_2024956_19 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 392.0
BYD1_k127_2024956_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.909e-254 792.0
BYD1_k127_2024956_20 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 373.0
BYD1_k127_2024956_21 Binding-protein-dependent transport system inner membrane component K10002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 370.0
BYD1_k127_2024956_22 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 375.0
BYD1_k127_2024956_23 Protein of unknown function (DUF3443) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 342.0
BYD1_k127_2024956_24 epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 303.0
BYD1_k127_2024956_25 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001861 283.0
BYD1_k127_2024956_26 import inner membrane translocase subunit Tim44 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005567 282.0
BYD1_k127_2024956_27 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001166 293.0
BYD1_k127_2024956_28 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000000000000000000002308 222.0
BYD1_k127_2024956_29 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000007208 213.0
BYD1_k127_2024956_3 Fumarase C C-terminus K01744 - 4.3.1.1 6.416e-230 719.0
BYD1_k127_2024956_30 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000000000000153 209.0
BYD1_k127_2024956_31 signal transduction protein containing EAL and modified HD-GYP - - - 0.00000000000000000000000000000000000000000000000000000000004632 218.0
BYD1_k127_2024956_32 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.000000000000000000000000000000000000000000000000000001039 198.0
BYD1_k127_2024956_33 membrane - - - 0.00000000000000000000000000000000000000000000001025 174.0
BYD1_k127_2024956_34 Histidine triad (HIT) - - - 0.00000000000000000000000000000000000000000000001609 174.0
BYD1_k127_2024956_35 Bacterial transcriptional repressor C-terminal - - - 0.00000000000000000000000000000000000000000000001843 177.0
BYD1_k127_2024956_36 protein conserved in bacteria K03690 - - 0.0000000000000000000000000000000000003876 152.0
BYD1_k127_2024956_37 - - - - 0.00000000000000000000000000000000001852 142.0
BYD1_k127_2024956_38 FR47-like protein - - - 0.000000000000000000000000000000006173 133.0
BYD1_k127_2024956_39 Protein of unknown function (DUF2844) - - - 0.0000000000000000000000000000005285 126.0
BYD1_k127_2024956_4 Bacterial regulatory protein, Fis family K10126 - - 6.558e-210 661.0
BYD1_k127_2024956_40 - - - - 0.0000007962 60.0
BYD1_k127_2024956_5 Soluble lytic murein transglycosylase L domain K08309 - - 3.911e-206 660.0
BYD1_k127_2024956_6 His Kinase A (phosphoacceptor) domain K10125 - 2.7.13.3 2.492e-204 655.0
BYD1_k127_2024956_7 sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 592.0
BYD1_k127_2024956_8 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 560.0
BYD1_k127_2024956_9 Asparaginase K01424,K05597 - 3.5.1.1,3.5.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 543.0
BYD1_k127_21447_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1758.0
BYD1_k127_21447_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1485.0
BYD1_k127_21447_10 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 1.55e-251 783.0
BYD1_k127_21447_100 Peptidase S24-like - - - 0.000000000000000000000000000001237 126.0
BYD1_k127_21447_101 - - - - 0.0000000000000000000000000002883 131.0
BYD1_k127_21447_102 - - - - 0.0000000000000000000000000004501 117.0
BYD1_k127_21447_103 Membrane dipeptidase (Peptidase family M19) - - - 0.0000000000000000000000000005489 126.0
BYD1_k127_21447_104 Flagellar assembly protein FliH K03223 - - 0.0000000000000000000000000008086 123.0
BYD1_k127_21447_105 phosphorelay signal transduction system - - - 0.0000000000000000000000000009258 124.0
BYD1_k127_21447_106 Protein of unknown function (DUF3106) - - - 0.00000000000000000000000001765 116.0
BYD1_k127_21447_108 - - - - 0.0000000000000000000000003166 109.0
BYD1_k127_21447_109 membrane protein domain - - - 0.0000000000000000000000003201 110.0
BYD1_k127_21447_11 Glycolate oxidase subunit GlcD K00104 - 1.1.3.15 2.338e-238 745.0
BYD1_k127_21447_111 Protein of unknown function (DUF2789) - - - 0.00000000000000000000003536 100.0
BYD1_k127_21447_112 TIGRFAM type III secretion protein, HrpO family K03227 - - 0.000000000000000000001257 104.0
BYD1_k127_21447_115 - - - - 0.00000000000000009559 82.0
BYD1_k127_21447_116 type III secretion protein HrpB1 HrpK K18373 - - 0.0000000000000001747 85.0
BYD1_k127_21447_118 Type III secretion K03225 - - 0.000000000000001344 89.0
BYD1_k127_21447_119 Protein of unknown function (DUF3619) - - - 0.00000000000001547 81.0
BYD1_k127_21447_12 PFAM H transporting two-sector ATPase alpha beta subunit central region K03224 - 3.6.3.14 2.084e-225 705.0
BYD1_k127_21447_121 type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000003967 60.0
BYD1_k127_21447_122 - - - - 0.0007563 44.0
BYD1_k127_21447_13 Glucose inhibited division protein A K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 5.442e-217 679.0
BYD1_k127_21447_14 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 2.592e-216 691.0
BYD1_k127_21447_15 Chromate transporter K07240 - - 1.865e-213 669.0
BYD1_k127_21447_16 Transporter associated domain K03699 - - 1.817e-202 638.0
BYD1_k127_21447_17 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 6.045e-197 616.0
BYD1_k127_21447_18 PFAM C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005073 607.0
BYD1_k127_21447_19 Psort location CytoplasmicMembrane, score 10.00 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006851 593.0
BYD1_k127_21447_2 Type III restriction K01153 - 3.1.21.3 0.0 1292.0
BYD1_k127_21447_20 Fic/DOC family N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 569.0
BYD1_k127_21447_21 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 570.0
BYD1_k127_21447_22 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 552.0
BYD1_k127_21447_23 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 548.0
BYD1_k127_21447_24 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 556.0
BYD1_k127_21447_25 Metal dependent phosphohydrolases with conserved 'HD' motif. K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 545.0
BYD1_k127_21447_26 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 536.0
BYD1_k127_21447_27 TIGRFAM type III secretion outer membrane pore, YscC HrcC family K03219,K22504 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 532.0
BYD1_k127_21447_28 PFAM von Willebrand factor type A K02448 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002813 520.0
BYD1_k127_21447_29 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 496.0
BYD1_k127_21447_3 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase - - - 0.0 1283.0
BYD1_k127_21447_30 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 498.0
BYD1_k127_21447_31 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008435 496.0
BYD1_k127_21447_32 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007164 505.0
BYD1_k127_21447_33 PFAM 4Fe-4S K00184,K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009767 470.0
BYD1_k127_21447_34 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 477.0
BYD1_k127_21447_35 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 465.0
BYD1_k127_21447_36 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 474.0
BYD1_k127_21447_37 PFAM DMSO reductase anchor subunit (DmsC) K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 466.0
BYD1_k127_21447_38 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 459.0
BYD1_k127_21447_39 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 458.0
BYD1_k127_21447_4 His Kinase A (phosphoacceptor) domain - - - 0.0 1170.0
BYD1_k127_21447_40 Permease YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 445.0
BYD1_k127_21447_41 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 434.0
BYD1_k127_21447_42 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003378 439.0
BYD1_k127_21447_43 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 434.0
BYD1_k127_21447_44 FAD binding domain K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002274 436.0
BYD1_k127_21447_45 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 434.0
BYD1_k127_21447_46 BRO family, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009417 419.0
BYD1_k127_21447_47 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 428.0
BYD1_k127_21447_48 Belongs to the N(4) N(6)-methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 385.0
BYD1_k127_21447_49 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 371.0
BYD1_k127_21447_5 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 0.0 1085.0
BYD1_k127_21447_50 GfdT protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 368.0
BYD1_k127_21447_51 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 356.0
BYD1_k127_21447_52 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 359.0
BYD1_k127_21447_53 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 342.0
BYD1_k127_21447_54 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 340.0
BYD1_k127_21447_55 4Fe-4S dicluster domain K16887 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 334.0
BYD1_k127_21447_56 Type III secretion exporter K02401,K03229 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004232 340.0
BYD1_k127_21447_57 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009075 332.0
BYD1_k127_21447_58 PFAM type III secretion system inner membrane P protein K03226 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 327.0
BYD1_k127_21447_59 Protein of unknown function, DUF599 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 303.0
BYD1_k127_21447_6 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 1.243e-316 975.0
BYD1_k127_21447_60 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004872 300.0
BYD1_k127_21447_61 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 299.0
BYD1_k127_21447_62 methyl-accepting chemotaxis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001169 295.0
BYD1_k127_21447_63 Type III Secretion K03228 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 291.0
BYD1_k127_21447_64 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 291.0
BYD1_k127_21447_65 TIGRFAM type III secretion apparatus lipoprotein, YscJ HrcJ family K03222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000896 288.0
BYD1_k127_21447_66 Acetolactate synthase small K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003731 282.0
BYD1_k127_21447_67 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 291.0
BYD1_k127_21447_68 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004105 280.0
BYD1_k127_21447_69 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008339 277.0
BYD1_k127_21447_7 TIGRFAM type III secretion protein, HrcV family K03230 - - 7.41e-297 924.0
BYD1_k127_21447_70 Regulatory protein HrpB - GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0030260,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0044403,GO:0044409,GO:0044419,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0060255,GO:0065007,GO:0080090,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000002131 259.0
BYD1_k127_21447_71 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000562 244.0
BYD1_k127_21447_72 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000005949 257.0
BYD1_k127_21447_73 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004326 231.0
BYD1_k127_21447_74 Tir chaperone family protein - - - 0.0000000000000000000000000000000000000000000000000000000000002123 215.0
BYD1_k127_21447_75 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000002 213.0
BYD1_k127_21447_76 methyl-accepting chemotaxis - - - 0.00000000000000000000000000000000000000000000000000000000002934 215.0
BYD1_k127_21447_77 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000001218 220.0
BYD1_k127_21447_78 May nick specific sequences that contain T G mispairs resulting from m5C-deamination K07458 - - 0.0000000000000000000000000000000000000000000000000000008662 194.0
BYD1_k127_21447_79 Peptidyl-prolyl cis-trans K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000006991 195.0
BYD1_k127_21447_8 of ABC transporters with duplicated ATPase - - - 3.766e-296 915.0
BYD1_k127_21447_80 alpha/beta hydrolase fold K01253 - 3.3.2.9 0.00000000000000000000000000000000000000000000000000005786 211.0
BYD1_k127_21447_81 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000006139 207.0
BYD1_k127_21447_82 response regulator K13041 - - 0.000000000000000000000000000000000000000000000000001198 190.0
BYD1_k127_21447_84 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.000000000000000000000000000000000000000000000000006451 181.0
BYD1_k127_21447_85 acetyltransferase K00937,K15520 GO:0000302,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009268,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010125,GO:0010126,GO:0010447,GO:0016137,GO:0016138,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0033554,GO:0034599,GO:0034614,GO:0035447,GO:0035690,GO:0040007,GO:0042221,GO:0042493,GO:0042542,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044249,GO:0044272,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071468,GO:0071704,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701 2.3.1.189,2.7.4.1 0.000000000000000000000000000000000000000000000001012 179.0
BYD1_k127_21447_86 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000000000000000000000009722 177.0
BYD1_k127_21447_88 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.0000000000000000000000000000000000000000000000781 191.0
BYD1_k127_21447_89 - - - - 0.000000000000000000000000000000000000000000001108 169.0
BYD1_k127_21447_9 TIGRFAM Nucleotidyltransferase substrate binding protein, HI0074 - - - 2.961e-253 786.0
BYD1_k127_21447_90 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000001141 178.0
BYD1_k127_21447_91 Uncharacterized ACR, COG1993 - - - 0.0000000000000000000000000000000000000000001241 161.0
BYD1_k127_21447_92 - K03220 - - 0.0000000000000000000000000000000000000000001295 175.0
BYD1_k127_21447_93 DsrE/DsrF-like family K06039 - - 0.00000000000000000000000000000000000000000025 161.0
BYD1_k127_21447_94 PFAM Lytic transglycosylase catalytic - - - 0.0000000000000000000000000000000000000001457 162.0
BYD1_k127_21447_95 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.000000000000000000000000000000000000000706 158.0
BYD1_k127_21447_96 Ribosomal L27 protein K02899 - - 0.00000000000000000000000000000000000001356 145.0
BYD1_k127_21447_97 sulphate transporter K03321 - - 0.00000000000000000000000000000000000223 156.0
BYD1_k127_21447_98 Sulfurtransferase TusA K04085 - - 0.000000000000000000000000000000004608 130.0
BYD1_k127_2162192_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1051.0
BYD1_k127_2162192_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 4.347e-287 898.0
BYD1_k127_2162192_10 Cobalt uptake substrate-specific transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000002303 227.0
BYD1_k127_2162192_11 'signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000006399 228.0
BYD1_k127_2162192_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000001151 218.0
BYD1_k127_2162192_13 - - - - 0.00000001255 63.0
BYD1_k127_2162192_2 Acyl-CoA dehydrogenase N terminal K20035 - - 5.467e-273 850.0
BYD1_k127_2162192_3 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 2.962e-211 666.0
BYD1_k127_2162192_4 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 595.0
BYD1_k127_2162192_5 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 511.0
BYD1_k127_2162192_6 Electron transfer flavoprotein alpha subunit K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 468.0
BYD1_k127_2162192_7 Electron transfer flavoprotein K03521 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 421.0
BYD1_k127_2162192_8 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008083 377.0
BYD1_k127_2162192_9 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001954 246.0
BYD1_k127_2162320_0 Protein of unknown function (DUF1631) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008331 321.0
BYD1_k127_2453167_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.703e-307 945.0
BYD1_k127_2453167_1 pathogenesis - - - 6.329e-279 871.0
BYD1_k127_2453167_10 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000000008372 175.0
BYD1_k127_2453167_11 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.000000000000000000000000000000000000000004611 154.0
BYD1_k127_2453167_12 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000005284 149.0
BYD1_k127_2453167_13 membrane - - - 0.00000000001651 66.0
BYD1_k127_2453167_2 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 8.926e-213 671.0
BYD1_k127_2453167_3 Alpha/beta hydrolase family K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 486.0
BYD1_k127_2453167_4 Type I secretion system K16299 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 474.0
BYD1_k127_2453167_5 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 355.0
BYD1_k127_2453167_6 COGs COG0767 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007911 335.0
BYD1_k127_2453167_7 type I secretion membrane fusion protein, HlyD family K02022 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007803 278.0
BYD1_k127_2453167_8 PFAM response regulator receiver K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000008088 226.0
BYD1_k127_2453167_9 MlaD protein K06192 - - 0.000000000000000000000000000000000000000000000000000008889 213.0
BYD1_k127_2572305_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1059.0
BYD1_k127_2572305_1 Parallel beta-helix repeats - - - 6.9e-299 986.0
BYD1_k127_2572305_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006164 499.0
BYD1_k127_2572305_11 PFAM NHL repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003414 494.0
BYD1_k127_2572305_12 Reverse transcriptase (RNA-dependent DNA polymerase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 452.0
BYD1_k127_2572305_13 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 443.0
BYD1_k127_2572305_14 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009657 424.0
BYD1_k127_2572305_15 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 419.0
BYD1_k127_2572305_16 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009636 381.0
BYD1_k127_2572305_17 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 402.0
BYD1_k127_2572305_18 PFAM type II secretion system K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 387.0
BYD1_k127_2572305_19 His Kinase A (phosphoacceptor) domain K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 380.0
BYD1_k127_2572305_2 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 3.983e-239 752.0
BYD1_k127_2572305_20 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 359.0
BYD1_k127_2572305_21 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 354.0
BYD1_k127_2572305_22 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 328.0
BYD1_k127_2572305_23 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005739 325.0
BYD1_k127_2572305_24 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 299.0
BYD1_k127_2572305_25 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 299.0
BYD1_k127_2572305_26 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 287.0
BYD1_k127_2572305_27 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000001762 239.0
BYD1_k127_2572305_28 Parallel beta-helix repeats - - - 0.000000000000000000000000000000000000000000000000000000000000000000002255 261.0
BYD1_k127_2572305_29 PFAM Metal-dependent hydrolase HDOD - - - 0.000000000000000000000000000000000000000000000000000000000000000000009399 243.0
BYD1_k127_2572305_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 9.864e-239 741.0
BYD1_k127_2572305_30 Sel1-like repeats. K07126 - - 0.00000000000000000000000000000000000000000000000000000000000000000001001 255.0
BYD1_k127_2572305_31 response regulator K11618 - - 0.00000000000000000000000000000000000000000000000000000000000000000006934 240.0
BYD1_k127_2572305_32 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000002343 230.0
BYD1_k127_2572305_33 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000007782 227.0
BYD1_k127_2572305_34 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000006178 207.0
BYD1_k127_2572305_35 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000001108 226.0
BYD1_k127_2572305_36 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000003076 214.0
BYD1_k127_2572305_37 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.00000000000000000000000000000000000000000000000000000008125 203.0
BYD1_k127_2572305_38 Periplasmic copper-binding protein (NosD) K07218 - - 0.00000000000000000000000000000000000000000000000000001726 199.0
BYD1_k127_2572305_39 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000000000000004141 193.0
BYD1_k127_2572305_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 5.391e-236 740.0
BYD1_k127_2572305_40 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000000000000000006602 186.0
BYD1_k127_2572305_41 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000000002962 188.0
BYD1_k127_2572305_42 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000000000000007645 184.0
BYD1_k127_2572305_43 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000003393 183.0
BYD1_k127_2572305_44 Transglycosylase SLT domain K01185 - 3.2.1.17 0.00000000000000000000000000000000000000000000000356 182.0
BYD1_k127_2572305_45 histidine kinase, dimerisation and phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000008398 192.0
BYD1_k127_2572305_46 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000000000000000000000003144 188.0
BYD1_k127_2572305_47 prepilin-type N-terminal cleavage methylation K02456 - - 0.0000000000000000000000000000000000000000000004321 170.0
BYD1_k127_2572305_48 - - - - 0.00000000000000000000000000000000000000000003139 166.0
BYD1_k127_2572305_49 response regulator receiver - - - 0.00000000000000000000000000000000000000000006229 183.0
BYD1_k127_2572305_5 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 1.492e-221 701.0
BYD1_k127_2572305_50 PFAM NHL repeat containing protein - - - 0.000000000000000000000000000000000000000004111 163.0
BYD1_k127_2572305_51 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000003398 153.0
BYD1_k127_2572305_52 coenzyme F390 K01912 - 6.2.1.30 0.0000000000000000000000000000000007629 140.0
BYD1_k127_2572305_53 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000004195 129.0
BYD1_k127_2572305_54 - - - - 0.00000000000000000000000000000009617 134.0
BYD1_k127_2572305_55 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000006286 102.0
BYD1_k127_2572305_56 Heat shock protein DnaJ domain protein - - - 0.00000000000000000000001046 115.0
BYD1_k127_2572305_57 - - - - 0.00000000000000000000002016 110.0
BYD1_k127_2572305_58 Pfam Response regulator receiver - - - 0.00000000000000000000004045 106.0
BYD1_k127_2572305_59 PFAM NHL repeat containing protein - - - 0.00000000000000000000005159 110.0
BYD1_k127_2572305_6 Cohesin domain K02453 - - 1.699e-209 689.0
BYD1_k127_2572305_60 carbon utilization K02664,K02665 - - 0.000000000000000000001545 105.0
BYD1_k127_2572305_61 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000376 105.0
BYD1_k127_2572305_62 - - - - 0.00000000000000000006669 98.0
BYD1_k127_2572305_63 - - - - 0.000000000000005295 81.0
BYD1_k127_2572305_65 Helix-turn-helix domain protein - - - 0.000000001545 65.0
BYD1_k127_2572305_66 Periplasmic copper-binding protein (NosD) - - - 0.0000002954 61.0
BYD1_k127_2572305_67 Protein of unknown function (DUF3135) - - - 0.00005907 49.0
BYD1_k127_2572305_7 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 578.0
BYD1_k127_2572305_8 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001526 573.0
BYD1_k127_2572305_9 PFAM NnrS family protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009777 524.0
BYD1_k127_2578078_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1397.0
BYD1_k127_2578078_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001695 388.0
BYD1_k127_2578078_2 Solute carrier family 35 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005805 375.0
BYD1_k127_2578078_3 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 318.0
BYD1_k127_2578078_4 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 304.0
BYD1_k127_2578078_5 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003791 285.0
BYD1_k127_2578078_6 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002928 244.0
BYD1_k127_2578078_7 Belongs to the BolA IbaG family K05527 - - 0.000000000000000000003398 97.0
BYD1_k127_2578078_8 Protein of unknown function (DUF3365) - - - 0.0000000000004862 79.0
BYD1_k127_2603244_0 Tex-like protein N-terminal domain K06959 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0 1166.0
BYD1_k127_2603244_1 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009446 539.0
BYD1_k127_2603244_10 COG0790 FOG TPR repeat, SEL1 subfamily K07126 GO:0002682,GO:0002683,GO:0002694,GO:0002695,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009986,GO:0019862,GO:0019865,GO:0044464,GO:0044877,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050776,GO:0050777,GO:0050789,GO:0050794,GO:0050865,GO:0050866,GO:0065007,GO:1902563,GO:1902564 - 0.000009802 58.0
BYD1_k127_2603244_2 Phosphate transporter family K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 526.0
BYD1_k127_2603244_3 Protein of unknown function (DUF2863) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 471.0
BYD1_k127_2603244_4 PFAM extracellular solute-binding protein family 1 K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 417.0
BYD1_k127_2603244_5 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005582 287.0
BYD1_k127_2603244_6 Hsp33 protein K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005232 273.0
BYD1_k127_2603244_7 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000102 255.0
BYD1_k127_2603244_8 Belongs to the ArsC family K00537 - 1.20.4.1 0.00000000000000000000000000000000000004411 147.0
BYD1_k127_2603244_9 Putative zinc- or iron-chelating domain K06940 - - 0.00000000000000000000000000000000000005538 145.0
BYD1_k127_292219_0 cell volume homeostasis K03316,K11105 - - 2.304e-231 721.0
BYD1_k127_292219_1 Ammonium Transporter Family K03320 - - 2.561e-223 698.0
BYD1_k127_292219_10 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000000009363 87.0
BYD1_k127_292219_11 - - - - 0.000001647 58.0
BYD1_k127_292219_2 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006265 607.0
BYD1_k127_292219_3 Membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004855 466.0
BYD1_k127_292219_4 ATPase (AAA K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 407.0
BYD1_k127_292219_5 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007641 355.0
BYD1_k127_292219_6 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 310.0
BYD1_k127_292219_7 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 319.0
BYD1_k127_292219_8 FMN_bind K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004927 280.0
BYD1_k127_292219_9 Part of a membrane complex involved in electron transport K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002831 241.0
BYD1_k127_3182951_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584 - - 1.515e-232 733.0
BYD1_k127_3182951_1 Bacterial protein of unknown function (DUF839) K07093 - - 5.701e-216 690.0
BYD1_k127_3182951_10 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.00000000000000004913 95.0
BYD1_k127_3182951_11 Glutaredoxin - - - 0.00000000000005249 83.0
BYD1_k127_3182951_13 Putative motility protein - - - 0.000000000005922 70.0
BYD1_k127_3182951_14 tigrfam pep-cterm - - - 0.0000005152 61.0
BYD1_k127_3182951_2 PAS PAC sensor signal transduction histidine kinase K05962 - 2.7.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 569.0
BYD1_k127_3182951_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 333.0
BYD1_k127_3182951_4 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000002852 203.0
BYD1_k127_3182951_5 - - - - 0.0000000000000000000000000000000000000000000000000005068 190.0
BYD1_k127_3182951_6 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000001567 188.0
BYD1_k127_3182951_7 Belongs to the UPF0235 family K09131 - - 0.00000000000000000000000000000000000000001461 163.0
BYD1_k127_3182951_8 - - - - 0.00000000000000000000000000000000005098 145.0
BYD1_k127_3182951_9 Glycosyltransferase like family 2 - - - 0.00000000000000000000001254 114.0
BYD1_k127_3191064_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1274.0
BYD1_k127_3191064_1 DNA topoisomerase III K03169 - 5.99.1.2 0.0 1168.0
BYD1_k127_3191064_10 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 2.804e-195 637.0
BYD1_k127_3191064_11 prohibitin homologues - - - 6.065e-194 614.0
BYD1_k127_3191064_12 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004961 591.0
BYD1_k127_3191064_13 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 591.0
BYD1_k127_3191064_14 membrane protein, TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 580.0
BYD1_k127_3191064_15 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 577.0
BYD1_k127_3191064_16 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 550.0
BYD1_k127_3191064_17 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003182 537.0
BYD1_k127_3191064_18 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 490.0
BYD1_k127_3191064_19 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K03472 - 1.2.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 471.0
BYD1_k127_3191064_2 Cytochrome bd-type quinol oxidase, subunit 1 K00425 - 1.10.3.14 2.972e-296 913.0
BYD1_k127_3191064_20 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 475.0
BYD1_k127_3191064_21 LysR substrate binding domain K03717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 466.0
BYD1_k127_3191064_22 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009054 466.0
BYD1_k127_3191064_23 nuclear chromosome segregation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 452.0
BYD1_k127_3191064_24 DNA recombination-mediator protein A K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 422.0
BYD1_k127_3191064_25 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 419.0
BYD1_k127_3191064_26 Voltage-dependent anion channel K03304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 396.0
BYD1_k127_3191064_27 Predicted nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 396.0
BYD1_k127_3191064_28 LysR substrate binding domain K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 376.0
BYD1_k127_3191064_29 Toxic anion resistance protein (TelA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003273 377.0
BYD1_k127_3191064_3 Regulator of RNA terminal phosphate cyclase K14414 - - 2.979e-286 885.0
BYD1_k127_3191064_30 C-terminal domain of 1-Cys peroxiredoxin K03386 GO:0003674,GO:0003824,GO:0004601,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0007154,GO:0008150,GO:0008152,GO:0009267,GO:0009321,GO:0009605,GO:0009636,GO:0009970,GO:0009987,GO:0009991,GO:0010033,GO:0016209,GO:0016491,GO:0016667,GO:0016671,GO:0016684,GO:0019725,GO:0030003,GO:0031667,GO:0031668,GO:0031669,GO:0032843,GO:0032991,GO:0033194,GO:0033195,GO:0033212,GO:0033214,GO:0033554,GO:0042221,GO:0042592,GO:0042594,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0046916,GO:0048878,GO:0050801,GO:0050896,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071496,GO:0097237,GO:0098754,GO:0098771,GO:0098869,GO:1901700,GO:1902494,GO:1990204,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003242 359.0
BYD1_k127_3191064_31 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 370.0
BYD1_k127_3191064_32 protein containing LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 347.0
BYD1_k127_3191064_33 histidine kinase HAMP region domain protein K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 355.0
BYD1_k127_3191064_34 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002395 331.0
BYD1_k127_3191064_35 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003297 325.0
BYD1_k127_3191064_36 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 319.0
BYD1_k127_3191064_37 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 296.0
BYD1_k127_3191064_38 EH_Signature domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001258 278.0
BYD1_k127_3191064_39 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000002648 241.0
BYD1_k127_3191064_4 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 7.776e-236 735.0
BYD1_k127_3191064_40 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000004513 237.0
BYD1_k127_3191064_41 Sulfite reductase K00381 - 1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000217 229.0
BYD1_k127_3191064_42 OmpA family - - - 0.0000000000000000000000000000000000000000000000000000000000000001029 229.0
BYD1_k127_3191064_43 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000000000000000000000000000000000000000000000000000000000000001285 230.0
BYD1_k127_3191064_44 Sulfite reductase, beta subunit (Hemoprotein) K00381,K00392 - 1.8.1.2,1.8.7.1 0.0000000000000000000000000000000000000000000000000000000000000004022 222.0
BYD1_k127_3191064_45 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000005191 224.0
BYD1_k127_3191064_46 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000003139 215.0
BYD1_k127_3191064_47 Bacterial protein of unknown function (DUF934) - - - 0.0000000000000000000000000000000000000000000000000000921 193.0
BYD1_k127_3191064_48 Sortase family K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000000006689 185.0
BYD1_k127_3191064_49 - - - - 0.0000000000000000000000000000000000000000001829 164.0
BYD1_k127_3191064_5 Thioredoxin domain K03387 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008785,GO:0009321,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363,GO:1902494,GO:1990204 - 1.143e-232 730.0
BYD1_k127_3191064_50 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000003468 150.0
BYD1_k127_3191064_52 - - - - 0.00000000000000000000000000000001206 137.0
BYD1_k127_3191064_53 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000001333 132.0
BYD1_k127_3191064_54 membrane - - - 0.000000000000000000000855 101.0
BYD1_k127_3191064_55 Disulfide bond formation protein DsbB K03611 - - 0.00000000000000000002083 97.0
BYD1_k127_3191064_57 Histidine kinase K07641 - 2.7.13.3 0.000001084 62.0
BYD1_k127_3191064_58 Tetratricopeptide repeat - - - 0.000002038 59.0
BYD1_k127_3191064_6 oxidase, subunit K00426 - 1.10.3.14 1.054e-215 674.0
BYD1_k127_3191064_7 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 4.064e-208 656.0
BYD1_k127_3191064_8 Cytochrome c bacterial - - - 1.421e-207 661.0
BYD1_k127_3191064_9 NMT1/THI5 like - - - 4.694e-200 640.0
BYD1_k127_3229455_0 Proton-conducting membrane transporter - - - 0.0 1915.0
BYD1_k127_3229455_1 von Willebrand factor, type A - - - 0.0 1141.0
BYD1_k127_3229455_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 512.0
BYD1_k127_3229455_11 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 499.0
BYD1_k127_3229455_12 CbbQ/NirQ/NorQ C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 470.0
BYD1_k127_3229455_13 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 441.0
BYD1_k127_3229455_14 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 452.0
BYD1_k127_3229455_15 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 400.0
BYD1_k127_3229455_16 Hydrogenase accessory protein HypB K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008994 381.0
BYD1_k127_3229455_17 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003674 321.0
BYD1_k127_3229455_18 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 296.0
BYD1_k127_3229455_19 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003559 269.0
BYD1_k127_3229455_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1095.0
BYD1_k127_3229455_20 Novel toxin 15 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001074 280.0
BYD1_k127_3229455_21 PFAM GCN5-related N-acetyltransferase K03824 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005805 249.0
BYD1_k127_3229455_22 GAD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002592 226.0
BYD1_k127_3229455_23 GAD-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000002127 220.0
BYD1_k127_3229455_24 Excalibur calcium-binding domain - - - 0.00000000000000000000000000000000000000000000000000000001861 202.0
BYD1_k127_3229455_25 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.00000000000000000000000000000000000000000003307 169.0
BYD1_k127_3229455_26 Novel toxin 15 - - - 0.0000000000000000000002003 99.0
BYD1_k127_3229455_27 amino acid transport K02030 - - 0.0000000000000000006992 98.0
BYD1_k127_3229455_28 - - - - 0.0004132 44.0
BYD1_k127_3229455_29 acetyltransferase K03824 - - 0.0004395 45.0
BYD1_k127_3229455_3 Chemotaxis - - - 1.017e-275 861.0
BYD1_k127_3229455_4 Phosphoglycerate kinase K00927 - 2.7.2.3 3.997e-223 696.0
BYD1_k127_3229455_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.022e-214 682.0
BYD1_k127_3229455_6 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 1.203e-199 638.0
BYD1_k127_3229455_7 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 5.728e-197 616.0
BYD1_k127_3229455_8 TIGRFAM fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 594.0
BYD1_k127_3229455_9 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 536.0
BYD1_k127_3274003_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.0 1194.0
BYD1_k127_3274003_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.224e-321 994.0
BYD1_k127_3274003_10 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 496.0
BYD1_k127_3274003_11 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000509 496.0
BYD1_k127_3274003_12 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 466.0
BYD1_k127_3274003_13 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 452.0
BYD1_k127_3274003_14 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 432.0
BYD1_k127_3274003_15 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 396.0
BYD1_k127_3274003_16 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 385.0
BYD1_k127_3274003_17 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 375.0
BYD1_k127_3274003_18 Nitrate TMAO reductase, membrane-bound tetraheme cytochrome c subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002774 354.0
BYD1_k127_3274003_19 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 329.0
BYD1_k127_3274003_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.985e-320 994.0
BYD1_k127_3274003_20 Ethylbenzene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 325.0
BYD1_k127_3274003_21 Cytochrome b/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 316.0
BYD1_k127_3274003_22 diguanylate cyclase K13590 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 319.0
BYD1_k127_3274003_23 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 313.0
BYD1_k127_3274003_24 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 306.0
BYD1_k127_3274003_25 Acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 303.0
BYD1_k127_3274003_26 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002383 293.0
BYD1_k127_3274003_27 Cytochrome B561 K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007269 279.0
BYD1_k127_3274003_28 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007168 269.0
BYD1_k127_3274003_29 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001736 272.0
BYD1_k127_3274003_3 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 6.06e-315 975.0
BYD1_k127_3274003_30 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000002972 253.0
BYD1_k127_3274003_31 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001297 246.0
BYD1_k127_3274003_32 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000000000000000000000000000001298 240.0
BYD1_k127_3274003_33 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000003083 236.0
BYD1_k127_3274003_34 Cobalamin B12-binding domain protein K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000008232 228.0
BYD1_k127_3274003_35 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000835 231.0
BYD1_k127_3274003_36 Enoyl-CoA hydratase/isomerase K13766,K15312 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000001991 208.0
BYD1_k127_3274003_37 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000005924 214.0
BYD1_k127_3274003_38 - - - - 0.00000000000000000000000000000000000000000000000000000000188 205.0
BYD1_k127_3274003_39 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000003379 204.0
BYD1_k127_3274003_4 Predicted permease K07089 - - 7.323e-215 678.0
BYD1_k127_3274003_40 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000000000001482 202.0
BYD1_k127_3274003_41 PIN domain - - - 0.0000000000000000000000000000000000000000000000000007236 187.0
BYD1_k127_3274003_42 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000003621 190.0
BYD1_k127_3274003_43 NusG domain II - - - 0.0000000000000000000000000000000000000000004757 171.0
BYD1_k127_3274003_44 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000004516 166.0
BYD1_k127_3274003_45 Thioredoxin-like domain - - - 0.000000000000000000000000000000000000005717 152.0
BYD1_k127_3274003_46 PFAM cytoplasmic chaperone TorD family protein - - - 0.00000000000000000000000000000000000006359 150.0
BYD1_k127_3274003_47 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000000000000000422 145.0
BYD1_k127_3274003_48 transcriptional regulators K03892 - - 0.0000000000000000000000000000000001312 135.0
BYD1_k127_3274003_49 Domain of unknown function (DUF2703) - - - 0.0000000000000000000000000000000001664 139.0
BYD1_k127_3274003_5 COG0798 Arsenite efflux pump ACR3 and related permeases K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 603.0
BYD1_k127_3274003_50 Thioredoxin domain - - - 0.0000000000000000000000000000000007788 131.0
BYD1_k127_3274003_51 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000000000002526 115.0
BYD1_k127_3274003_52 Thioredoxin domain - - - 0.000000000000000000000000004723 111.0
BYD1_k127_3274003_53 - - - - 0.000000000000000000000002662 111.0
BYD1_k127_3274003_54 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000007891 79.0
BYD1_k127_3274003_55 response regulator - - - 0.000000000000001447 90.0
BYD1_k127_3274003_56 peroxiredoxin activity K01607 - 4.1.1.44 0.000000000000001522 79.0
BYD1_k127_3274003_57 SlyX K03745 - - 0.00000000000001498 77.0
BYD1_k127_3274003_58 - - - - 0.00000000000004291 76.0
BYD1_k127_3274003_6 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 610.0
BYD1_k127_3274003_60 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0000001693 59.0
BYD1_k127_3274003_61 Transposase IS116 IS110 IS902 family protein K07486 - - 0.0001133 44.0
BYD1_k127_3274003_62 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0001627 48.0
BYD1_k127_3274003_63 Protein of unknown function DUF45 K07043 - - 0.0001997 51.0
BYD1_k127_3274003_7 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 585.0
BYD1_k127_3274003_8 Transposase IS116 IS110 IS902 family protein K07486 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001371 546.0
BYD1_k127_3274003_9 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 524.0
BYD1_k127_3387239_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 500.0
BYD1_k127_3387239_1 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000003291 208.0
BYD1_k127_3387239_2 Diguanylate cyclase - - - 0.00000000000006406 85.0
BYD1_k127_341493_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1053.0
BYD1_k127_341493_1 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.0 1024.0
BYD1_k127_341493_10 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 392.0
BYD1_k127_341493_11 Mut7-C ubiquitin K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 366.0
BYD1_k127_341493_12 Pilus formation protein N terminal region K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 372.0
BYD1_k127_341493_13 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172,K18357 - 1.2.1.58,1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 305.0
BYD1_k127_341493_14 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 301.0
BYD1_k127_341493_15 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 301.0
BYD1_k127_341493_16 Flavin reductase like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008976 292.0
BYD1_k127_341493_17 Flavin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 299.0
BYD1_k127_341493_18 Serine aminopeptidase, S33 K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 299.0
BYD1_k127_341493_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004062 302.0
BYD1_k127_341493_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 1.303e-294 921.0
BYD1_k127_341493_20 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002276 280.0
BYD1_k127_341493_21 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001505 268.0
BYD1_k127_341493_22 AAA domain K02282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006927 270.0
BYD1_k127_341493_23 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001355 263.0
BYD1_k127_341493_24 Type II secretion system (T2SS), protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001645 269.0
BYD1_k127_341493_25 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004758 270.0
BYD1_k127_341493_26 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000003488 246.0
BYD1_k127_341493_27 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000000000000000000001484 224.0
BYD1_k127_341493_28 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000000000000000000001645 198.0
BYD1_k127_341493_29 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000009774 198.0
BYD1_k127_341493_3 Belongs to the peptidase S16 family - - - 6.874e-270 852.0
BYD1_k127_341493_30 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000002884 166.0
BYD1_k127_341493_31 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000005806 152.0
BYD1_k127_341493_32 Protein of unknown function (DUF1272) K09984 - - 0.000000000000000000000000000000000000001069 149.0
BYD1_k127_341493_33 Chromate transporter K07240 - - 0.00000000000000000000000000000000000001958 152.0
BYD1_k127_341493_34 Transcriptional regulator crp fnr family K01420 - - 0.000000000000000000000000000000000617 141.0
BYD1_k127_341493_36 - - - - 0.00000000000000000000009209 103.0
BYD1_k127_341493_37 Protein of unknown function (DUF504) - - - 0.0000000000000000000002022 102.0
BYD1_k127_341493_38 LytR cell envelope-related transcriptional attenuator - - - 0.000000000000000000002312 106.0
BYD1_k127_341493_39 Type IV leader peptidase family - - - 0.000000000000000000009217 99.0
BYD1_k127_341493_4 Spermine/spermidine synthase domain K00797 - 2.5.1.16 9.666e-255 816.0
BYD1_k127_341493_40 - - - - 0.000000000000000007542 89.0
BYD1_k127_341493_41 TadE-like protein - - - 0.0000000000000001154 86.0
BYD1_k127_341493_42 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000003539 82.0
BYD1_k127_341493_44 TadE-like protein - - - 0.00000000624 64.0
BYD1_k127_341493_46 Involved in the tonB-independent uptake of proteins K01730,K03641 - 4.2.2.6 0.0000003718 62.0
BYD1_k127_341493_47 PFAM Flp Fap pilin component K02651 - - 0.00002493 50.0
BYD1_k127_341493_5 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 2.07e-253 787.0
BYD1_k127_341493_6 pyruvate flavodoxin ferredoxin oxidoreductase K00169 - 1.2.7.1 7.321e-211 662.0
BYD1_k127_341493_7 Type II/IV secretion system protein K02283 - - 1.073e-197 625.0
BYD1_k127_341493_8 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 605.0
BYD1_k127_341493_9 PFAM Thiamine pyrophosphate K00170,K18356 - 1.2.1.58,1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 576.0
BYD1_k127_3451413_0 type II secretion system protein E K02454,K02652,K12276 - - 1.421e-198 624.0
BYD1_k127_3451413_1 Cohesin domain K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004653 503.0
BYD1_k127_3451413_10 Fg-gap repeat K18197 - 4.2.2.23 0.0000000000000000000000000000001718 143.0
BYD1_k127_3451413_11 - - - - 0.00000000000000000001019 106.0
BYD1_k127_3451413_12 - - - - 0.0000000000000000004344 97.0
BYD1_k127_3451413_13 carbon utilization - - - 0.0000000000000001275 87.0
BYD1_k127_3451413_14 - - - - 0.000000000000007109 82.0
BYD1_k127_3451413_15 Glycogen debranching - - - 0.0000001207 65.0
BYD1_k127_3451413_2 RHS Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004838 491.0
BYD1_k127_3451413_3 response regulator K14979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001346 259.0
BYD1_k127_3451413_4 Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001568 233.0
BYD1_k127_3451413_5 prepilin-type N-terminal cleavage methylation K02456 - - 0.000000000000000000000000000000000000000000000000000003777 195.0
BYD1_k127_3451413_6 TIGRFAM RHS repeat-associated core domain - - - 0.00000000000000000000000000000000000000000002594 185.0
BYD1_k127_3451413_7 Type II secretory pathway pseudopilin - - - 0.0000000000000000000000000000000000000000004462 164.0
BYD1_k127_3451413_8 Helix-turn-helix domain - - - 0.0000000000000000000000000000000000000004868 151.0
BYD1_k127_3451413_9 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000007168 154.0
BYD1_k127_3513212_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 1.445e-195 615.0
BYD1_k127_3513212_1 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006066 480.0
BYD1_k127_3513212_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00016,K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.27,1.1.1.37 0.000000000009711 65.0
BYD1_k127_3609169_0 chemotaxis protein K03407 - 2.7.13.3 6.582e-294 918.0
BYD1_k127_3609169_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 548.0
BYD1_k127_3609169_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005056 539.0
BYD1_k127_3609169_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 497.0
BYD1_k127_3609169_4 methyl-accepting chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 381.0
BYD1_k127_3609169_5 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 366.0
BYD1_k127_3609169_6 chemotaxis sensory transducer K03406,K03776,K05874 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 331.0
BYD1_k127_3609169_7 response regulator K03413 - - 0.0000000000000000000000000000000000000000000000000000000009211 203.0
BYD1_k127_3609169_8 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000001285 161.0
BYD1_k127_3609169_9 STAS domain - - - 0.00000000000000000000000006564 113.0
BYD1_k127_3685505_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1241.0
BYD1_k127_3685505_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 561.0
BYD1_k127_3685505_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 557.0
BYD1_k127_3685505_3 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009642 558.0
BYD1_k127_3685505_4 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000098 505.0
BYD1_k127_3685505_5 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 441.0
BYD1_k127_3685505_6 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 366.0
BYD1_k127_3685505_7 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008214 250.0
BYD1_k127_3685505_8 HAD-hyrolase-like K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000009326 243.0
BYD1_k127_3994807_0 phosphatase homologous to the C-terminal domain of histone macroH2A1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 533.0
BYD1_k127_3994807_1 carboxylic acid catabolic process K01684 - 4.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 347.0
BYD1_k127_3994807_2 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008978 293.0
BYD1_k127_3994807_3 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000002418 249.0
BYD1_k127_4229526_0 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K05685 - - 2.062e-233 739.0
BYD1_k127_4229526_1 DbpA RNA binding domain K05591 GO:0000339,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006412,GO:0006413,GO:0006518,GO:0006725,GO:0006807,GO:0008026,GO:0008135,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0016070,GO:0016281,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0042623,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0060255,GO:0065007,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 3.6.4.13 2.382e-208 656.0
BYD1_k127_4229526_2 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 601.0
BYD1_k127_4229526_3 outer_NodT efflux transporter, outer membrane factor (OMF) lipo, NodT family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006235 453.0
BYD1_k127_4229526_4 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 398.0
BYD1_k127_4229526_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008162 384.0
BYD1_k127_4229526_6 Cytochrome K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000184 263.0
BYD1_k127_4229526_7 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001185 254.0
BYD1_k127_4229526_9 - - - - 0.0000000000000000000009614 98.0
BYD1_k127_4231276_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0 1022.0
BYD1_k127_4231276_1 Toprim-like - - - 1.738e-316 994.0
BYD1_k127_4231276_10 Domain of unknown function (DUF4263) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 331.0
BYD1_k127_4231276_11 late control K06905 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008496 326.0
BYD1_k127_4231276_12 Protein of unknown function (DUF5131) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003372 287.0
BYD1_k127_4231276_13 Pfam:DUF3380 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001746 281.0
BYD1_k127_4231276_14 PFAM Baseplate J family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002173 266.0
BYD1_k127_4231276_15 Phage small terminase subunit - - - 0.00000000000000000000000000000000000000000000000000000000000001589 227.0
BYD1_k127_4231276_16 Phage tail tube protein FII K06908 - - 0.000000000000000000000000000000000000000000000000000000001322 205.0
BYD1_k127_4231276_17 - - - - 0.000000000000000000000000000000000000000000000000000000008957 207.0
BYD1_k127_4231276_18 Baseplate assembly - - - 0.0000000000000000000000000000000000000000000000000000002608 201.0
BYD1_k127_4231276_19 P2 GpU family protein K06906 - - 0.0000000000000000000000000000000000000000000000000004446 189.0
BYD1_k127_4231276_2 Terminase RNaseH-like domain - - - 1.577e-259 820.0
BYD1_k127_4231276_20 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.0000000000000000000000000000000000000000000000000104 190.0
BYD1_k127_4231276_21 Phage tail protein (Tail_P2_I) - - - 0.000000000000000000000000000000000000000000327 171.0
BYD1_k127_4231276_22 Phage capsid scaffolding protein (GPO) serine peptidase - - - 0.000000000000000000000000000000000000000002376 166.0
BYD1_k127_4231276_23 Phage head completion protein (GPL) - - - 0.000000000000000000000000000000000007877 145.0
BYD1_k127_4231276_24 Phage virion morphogenesis family - - - 0.000000000000000000000000000000000008089 142.0
BYD1_k127_4231276_25 tail collar domain protein - - - 0.0000000000000000000000000000000003203 144.0
BYD1_k127_4231276_26 - - - - 0.000000000000000000000000000000001911 137.0
BYD1_k127_4231276_28 LydA holin phage, holin superfamily III - - - 0.0000000000000000000000000000002942 126.0
BYD1_k127_4231276_29 P2 phage tail completion R family protein - - - 0.000000000000000000000000004146 117.0
BYD1_k127_4231276_3 tail sheath protein K06907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 546.0
BYD1_k127_4231276_30 Gene 25-like lysozyme K06903 - - 0.0000000000000000000000003303 118.0
BYD1_k127_4231276_31 HNH nucleases - - - 0.00000000000000000000001213 103.0
BYD1_k127_4231276_32 Phage tail assembly chaperone proteins, E, or 41 or 14 - - - 0.00000000000000000000003599 101.0
BYD1_k127_4231276_33 Ogr/Delta-like zinc finger - - - 0.0000000000000001003 88.0
BYD1_k127_4231276_34 Phage Tail Protein X - - - 0.0000000000000005496 91.0
BYD1_k127_4231276_35 Domain of unknown function (DUF4145) - - - 0.0000000000007855 78.0
BYD1_k127_4231276_4 Phage-related minor tail protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 563.0
BYD1_k127_4231276_40 P2 GpE family protein - - - 0.00000001305 58.0
BYD1_k127_4231276_42 Transcriptional regulator, XRE family - - - 0.0000004597 58.0
BYD1_k127_4231276_43 Family of unknown function (DUF5420) - - - 0.00001237 55.0
BYD1_k127_4231276_44 - - - - 0.00001694 56.0
BYD1_k127_4231276_5 portal protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009023 503.0
BYD1_k127_4231276_6 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007353 484.0
BYD1_k127_4231276_7 capsid protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 443.0
BYD1_k127_4231276_8 D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 395.0
BYD1_k127_4231276_9 recombinase activity K06400 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007776 381.0
BYD1_k127_4288084_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1216.0
BYD1_k127_4288084_1 cobalamin-transporting ATPase activity K02014 - - 0.0 1045.0
BYD1_k127_4288084_10 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008672 505.0
BYD1_k127_4288084_11 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 475.0
BYD1_k127_4288084_12 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 396.0
BYD1_k127_4288084_13 Domain of unknown function (DUF4880) K07165 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 329.0
BYD1_k127_4288084_14 SOS response associated peptidase (SRAP) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 315.0
BYD1_k127_4288084_15 enzyme of heme biosynthesis K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 319.0
BYD1_k127_4288084_16 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 310.0
BYD1_k127_4288084_17 PFAM histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 299.0
BYD1_k127_4288084_18 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007979 286.0
BYD1_k127_4288084_19 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004624 278.0
BYD1_k127_4288084_2 DNA segregation ATPase FtsK SpoIIIE K03466 - - 6.115e-289 900.0
BYD1_k127_4288084_20 LytTr DNA-binding domain K08083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001896 284.0
BYD1_k127_4288084_21 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000001023 232.0
BYD1_k127_4288084_22 ribonuclease activity - - - 0.00000000000000000000000000000000000000000000000000000000000000001796 225.0
BYD1_k127_4288084_23 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000003195 218.0
BYD1_k127_4288084_24 Protein of unknown function (DUF1697) - - - 0.00000000000000000000000000000000000000000000000000001785 195.0
BYD1_k127_4288084_25 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000001312 144.0
BYD1_k127_4288084_26 Trypsin - - - 0.0000000000000000000000000000000000006646 155.0
BYD1_k127_4288084_27 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000003328 144.0
BYD1_k127_4288084_29 Bacterial antitoxin of type II TA system, VapB - - - 0.00000000000000000000002 112.0
BYD1_k127_4288084_3 argininosuccinate lyase K01755 - 4.3.2.1 2.345e-238 744.0
BYD1_k127_4288084_30 Chitinase class I K03791 - - 0.00000000000000000000006774 101.0
BYD1_k127_4288084_31 - - - - 0.000000000000004712 79.0
BYD1_k127_4288084_32 - - - - 0.0000000002838 66.0
BYD1_k127_4288084_33 PFAM Ankyrin K10799 - 2.4.2.30 0.00000004294 59.0
BYD1_k127_4288084_34 Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans-periplasmic membrane protein TonB K02014,K16092 - - 0.0000001573 57.0
BYD1_k127_4288084_37 excinuclease, ATPase subunit - - - 0.000432 51.0
BYD1_k127_4288084_4 AAA ATPase domain - - - 1.081e-229 724.0
BYD1_k127_4288084_5 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 1.411e-212 666.0
BYD1_k127_4288084_6 MgsA AAA+ ATPase C terminal K07478 - - 6.871e-208 656.0
BYD1_k127_4288084_7 antibiotic catabolic process K18235 - - 1.572e-206 650.0
BYD1_k127_4288084_8 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 582.0
BYD1_k127_4288084_9 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 589.0
BYD1_k127_4438860_0 AcrB/AcrD/AcrF family - - - 0.0 1398.0
BYD1_k127_4438860_1 Extracellular solute-binding protein K17321 - - 0.0 1070.0
BYD1_k127_4438860_10 PFAM binding-protein-dependent transport systems inner membrane component K17322 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 524.0
BYD1_k127_4438860_11 binding-protein-dependent transport systems inner membrane component K17323 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 493.0
BYD1_k127_4438860_12 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 511.0
BYD1_k127_4438860_13 PFAM regulatory protein DeoR K02444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008899 415.0
BYD1_k127_4438860_14 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 376.0
BYD1_k127_4438860_15 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000881 320.0
BYD1_k127_4438860_16 peptidoglycan receptor activity - - - 0.0000000000000000000000000000000000000000000000000000000002447 218.0
BYD1_k127_4438860_17 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000000001831 210.0
BYD1_k127_4438860_18 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000007169 227.0
BYD1_k127_4438860_19 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000000000000001022 203.0
BYD1_k127_4438860_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0 1050.0
BYD1_k127_4438860_20 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000000008249 183.0
BYD1_k127_4438860_21 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000001406 184.0
BYD1_k127_4438860_22 Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000008782 194.0
BYD1_k127_4438860_23 Integral membrane protein - - - 0.0000000000000000000000000000000000000000003686 171.0
BYD1_k127_4438860_24 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000001607 151.0
BYD1_k127_4438860_25 Putative quorum-sensing-regulated virulence factor K09954 - - 0.00000000000000000000000000000001159 128.0
BYD1_k127_4438860_26 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000006037 109.0
BYD1_k127_4438860_27 PFAM glycosyl transferase family 9 - - - 0.0000000000759 73.0
BYD1_k127_4438860_28 Peptidase family M41 K03798 - - 0.0000568 48.0
BYD1_k127_4438860_3 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 4.881e-285 888.0
BYD1_k127_4438860_4 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.252e-243 760.0
BYD1_k127_4438860_5 FAD dependent oxidoreductase K00111 - 1.1.5.3 2.104e-222 700.0
BYD1_k127_4438860_6 abc-type branched-chain amino acid transport K01999 - - 7.032e-198 625.0
BYD1_k127_4438860_7 Belongs to the ABC transporter superfamily K17325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008573 563.0
BYD1_k127_4438860_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005806 572.0
BYD1_k127_4438860_9 ATPase component of ABC-type sugar transporter K02010,K17324 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002503 529.0
BYD1_k127_4648867_0 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 469.0
BYD1_k127_4648867_1 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 441.0
BYD1_k127_4648867_10 Cache domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000691 256.0
BYD1_k127_4648867_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000252 239.0
BYD1_k127_4648867_12 Psort location CytoplasmicMembrane, score 9.46 K15977 - - 0.0000000000000000000000000000000000000000000000000000000000000000002174 235.0
BYD1_k127_4648867_13 Periplasmic sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000474 238.0
BYD1_k127_4648867_14 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000004061 225.0
BYD1_k127_4648867_15 COG0840 Methyl-accepting chemotaxis protein K08738 - - 0.00000000000000000000000000000000000000000000000005972 182.0
BYD1_k127_4648867_16 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.0000000000000000000000000000000000000006731 148.0
BYD1_k127_4648867_17 Domain of unknown function (DUF4154) - - - 0.0000000000000000000000003935 111.0
BYD1_k127_4648867_18 - - - - 0.0000000000000000000000009832 110.0
BYD1_k127_4648867_19 - - - - 0.0000001056 61.0
BYD1_k127_4648867_2 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002391 415.0
BYD1_k127_4648867_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006647 383.0
BYD1_k127_4648867_4 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 359.0
BYD1_k127_4648867_5 RNA-binding S4 domain-containing protein K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 307.0
BYD1_k127_4648867_6 Putative DNA-binding domain K09929 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 309.0
BYD1_k127_4648867_7 Cyclic nucleotide-monophosphate binding domain K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004241 286.0
BYD1_k127_4648867_8 AAA-like domain K06915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002737 270.0
BYD1_k127_4648867_9 Protein of unknown function (DUF1109) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004337 248.0
BYD1_k127_4665369_0 Von willebrand factor, type a - - - 0.0 1090.0
BYD1_k127_4665369_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 5.861e-297 921.0
BYD1_k127_4665369_10 LysR substrate binding domain K21703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 325.0
BYD1_k127_4665369_11 SNARE associated Golgi protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 322.0
BYD1_k127_4665369_12 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 313.0
BYD1_k127_4665369_13 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 311.0
BYD1_k127_4665369_14 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 284.0
BYD1_k127_4665369_15 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000000000000000000003129 265.0
BYD1_k127_4665369_16 Cobalt uptake substrate-specific transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003888 257.0
BYD1_k127_4665369_17 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000001134 219.0
BYD1_k127_4665369_18 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000000000002449 160.0
BYD1_k127_4665369_2 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 3.83e-270 838.0
BYD1_k127_4665369_3 Polyphosphate kinase 2 (PPK2) - - - 2.904e-260 808.0
BYD1_k127_4665369_4 aminoacyl-histidine dipeptidase K01270 - - 1.801e-219 691.0
BYD1_k127_4665369_5 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002493 581.0
BYD1_k127_4665369_6 ATPase associated with various cellular activities AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005623 454.0
BYD1_k127_4665369_7 Bacterial periplasmic substrate-binding proteins K10001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 415.0
BYD1_k127_4665369_8 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008428 353.0
BYD1_k127_4665369_9 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005215 347.0
BYD1_k127_4693266_0 Domain of unknown function (DUF4131) K02238 - - 8.657e-261 824.0
BYD1_k127_4693266_1 Threonine synthase K01733 - 4.2.3.1 2.901e-241 752.0
BYD1_k127_4693266_10 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009815 402.0
BYD1_k127_4693266_11 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 379.0
BYD1_k127_4693266_12 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 381.0
BYD1_k127_4693266_13 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006465 337.0
BYD1_k127_4693266_14 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 322.0
BYD1_k127_4693266_15 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 314.0
BYD1_k127_4693266_16 Part of a membrane complex involved in electron transport K03613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 295.0
BYD1_k127_4693266_17 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005664 254.0
BYD1_k127_4693266_18 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000000006621 252.0
BYD1_k127_4693266_19 Small multidrug resistance - - - 0.00000000000000000000000000000000000000000000000000006057 190.0
BYD1_k127_4693266_2 homoserine dehydrogenase K00003 - 1.1.1.3 6.756e-241 749.0
BYD1_k127_4693266_20 - - - - 0.0000000000000005561 78.0
BYD1_k127_4693266_3 Part of a membrane complex involved in electron transport K03615 - - 4.972e-226 710.0
BYD1_k127_4693266_4 Aminotransferase K14260 - 2.6.1.2,2.6.1.66 2.798e-225 718.0
BYD1_k127_4693266_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 604.0
BYD1_k127_4693266_6 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006432 561.0
BYD1_k127_4693266_7 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000051 498.0
BYD1_k127_4693266_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004397 470.0
BYD1_k127_4693266_9 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 411.0
BYD1_k127_4873780_0 Patatin-like phospholipase K07001 - - 2.317e-244 769.0
BYD1_k127_4873780_1 PFAM Patatin K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 331.0
BYD1_k127_4873780_2 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000000000000000000000000000000000000004101 205.0
BYD1_k127_4873780_3 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000000000000000008331 121.0
BYD1_k127_4903636_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 2507.0
BYD1_k127_4903636_1 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0 1344.0
BYD1_k127_4903636_10 Aminotransferase K01845 - 5.4.3.8 2.779e-201 641.0
BYD1_k127_4903636_11 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 584.0
BYD1_k127_4903636_12 Transcriptional regulator with HTH domain and aminotransferase domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004537 563.0
BYD1_k127_4903636_13 Part of a membrane complex involved in electron transport K03615 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 549.0
BYD1_k127_4903636_14 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009051 544.0
BYD1_k127_4903636_15 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 554.0
BYD1_k127_4903636_16 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000804 535.0
BYD1_k127_4903636_17 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 468.0
BYD1_k127_4903636_18 TIGRFAM decaheme c-type cytochrome, DmsE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 462.0
BYD1_k127_4903636_19 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 462.0
BYD1_k127_4903636_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1073.0
BYD1_k127_4903636_20 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 447.0
BYD1_k127_4903636_21 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 450.0
BYD1_k127_4903636_22 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004192 449.0
BYD1_k127_4903636_23 serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 435.0
BYD1_k127_4903636_24 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 424.0
BYD1_k127_4903636_25 Fe-S cluster K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003799 417.0
BYD1_k127_4903636_26 COG2274 ABC-type bacteriocin lantibiotic exporters, contain an N-terminal double-glycine peptidase domain K13409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003443 435.0
BYD1_k127_4903636_27 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008794 410.0
BYD1_k127_4903636_28 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 392.0
BYD1_k127_4903636_29 carbonic anhydrase K01674 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002654 402.0
BYD1_k127_4903636_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1013.0
BYD1_k127_4903636_30 amidase activity K07504 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 385.0
BYD1_k127_4903636_31 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005279 371.0
BYD1_k127_4903636_32 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 348.0
BYD1_k127_4903636_33 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004286 370.0
BYD1_k127_4903636_34 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 319.0
BYD1_k127_4903636_35 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 325.0
BYD1_k127_4903636_36 Stress-induced protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 328.0
BYD1_k127_4903636_37 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 310.0
BYD1_k127_4903636_38 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 303.0
BYD1_k127_4903636_39 TonB family K03832 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003998 307.0
BYD1_k127_4903636_4 Cytochrome c K02198 - - 1.315e-305 949.0
BYD1_k127_4903636_40 Cytochrome c-type biogenesis protein K02200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003473 306.0
BYD1_k127_4903636_41 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007631 301.0
BYD1_k127_4903636_42 Belongs to the UPF0301 (AlgH) family K07735 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007045 279.0
BYD1_k127_4903636_43 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001225 281.0
BYD1_k127_4903636_44 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008931 274.0
BYD1_k127_4903636_45 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000002009 253.0
BYD1_k127_4903636_46 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004112 258.0
BYD1_k127_4903636_47 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000002464 241.0
BYD1_k127_4903636_48 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000007782 227.0
BYD1_k127_4903636_49 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000001086 226.0
BYD1_k127_4903636_5 Cytochrome c554 and c-prime - - - 3.393e-300 932.0
BYD1_k127_4903636_50 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000001232 231.0
BYD1_k127_4903636_51 cheY-homologous receiver domain K02657 - - 0.0000000000000000000000000000000000000000000000000000000000000964 214.0
BYD1_k127_4903636_52 Chemotaxis signal transduction protein K02659 - - 0.0000000000000000000000000000000000000000000000000000000001908 207.0
BYD1_k127_4903636_53 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000003026 201.0
BYD1_k127_4903636_54 RESPONSE REGULATOR receiver K02658 - - 0.0000000000000000000000000000000000000000000000000003267 186.0
BYD1_k127_4903636_55 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000003607 189.0
BYD1_k127_4903636_56 Phosphoribosyl transferase domain K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000131 187.0
BYD1_k127_4903636_57 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000000000000001419 183.0
BYD1_k127_4903636_58 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000000000001659 169.0
BYD1_k127_4903636_59 pathogenesis - - - 0.00000000000000000000000000000000000009328 158.0
BYD1_k127_4903636_6 RNB K01147 - 3.1.13.1 7.195e-262 826.0
BYD1_k127_4903636_60 Cytochrome c K08738 - - 0.0000000000000000000000000000000000001505 144.0
BYD1_k127_4903636_61 Fe-S-cluster oxidoreductase K06940 - - 0.000000000000000000000000000000007305 128.0
BYD1_k127_4903636_62 HlyD family secretion protein K13408 - - 0.00000000000000000000000000737 125.0
BYD1_k127_4903636_63 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000008188 107.0
BYD1_k127_4903636_64 CcdB protein K19163 - - 0.0000000000000000000002292 104.0
BYD1_k127_4903636_65 Protein of unknown function (DUF3460) - - - 0.00000000000000000003913 91.0
BYD1_k127_4903636_66 - - - - 0.0000000000000000001234 102.0
BYD1_k127_4903636_67 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.000000000000000003064 92.0
BYD1_k127_4903636_68 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.0000000000000001301 80.0
BYD1_k127_4903636_69 Post-segregation antitoxin CcdA K19164 - - 0.0000000000000005244 81.0
BYD1_k127_4903636_7 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 5.704e-255 809.0
BYD1_k127_4903636_71 Protein of unknown function (DUF2917) - - - 0.0000644 49.0
BYD1_k127_4903636_8 Magnesium transport protein CorA K03284 - - 1.261e-209 664.0
BYD1_k127_4903636_9 Methyl-accepting chemotaxis protein K02660 - - 2.542e-206 663.0
BYD1_k127_4910460_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1280.0
BYD1_k127_4910460_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 2.523e-303 942.0
BYD1_k127_4910460_10 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 452.0
BYD1_k127_4910460_11 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 442.0
BYD1_k127_4910460_12 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 427.0
BYD1_k127_4910460_13 Glycosyl transferases group 1 K02844 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 420.0
BYD1_k127_4910460_14 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006151 406.0
BYD1_k127_4910460_15 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 407.0
BYD1_k127_4910460_16 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009604 380.0
BYD1_k127_4910460_17 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 366.0
BYD1_k127_4910460_18 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008526 368.0
BYD1_k127_4910460_19 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 376.0
BYD1_k127_4910460_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.078e-241 760.0
BYD1_k127_4910460_20 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 335.0
BYD1_k127_4910460_21 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007747 344.0
BYD1_k127_4910460_22 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 317.0
BYD1_k127_4910460_23 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000028 322.0
BYD1_k127_4910460_24 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003688 311.0
BYD1_k127_4910460_25 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 300.0
BYD1_k127_4910460_26 PFAM Carbohydrate-selective porin OprB K07267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 301.0
BYD1_k127_4910460_27 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001016 286.0
BYD1_k127_4910460_28 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000227 279.0
BYD1_k127_4910460_29 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000009724 261.0
BYD1_k127_4910460_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 3.965e-241 752.0
BYD1_k127_4910460_30 Chemotaxis signal transduction protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005549 250.0
BYD1_k127_4910460_31 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007565 254.0
BYD1_k127_4910460_32 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000000000000000000000000000000000001581 242.0
BYD1_k127_4910460_33 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000000000000000000000000000007831 229.0
BYD1_k127_4910460_34 shape-determining protein K03571 - - 0.0000000000000000000000000000000000000000000000000000000000001665 219.0
BYD1_k127_4910460_35 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000000000000000002082 181.0
BYD1_k127_4910460_36 NlpC/P60 family - - - 0.0000000000000000000000000000000000000000000000000915 182.0
BYD1_k127_4910460_37 transferase activity, transferring glycosyl groups K02844 - - 0.00000000000000000000000000000000000000000000005212 183.0
BYD1_k127_4910460_38 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000001965 165.0
BYD1_k127_4910460_39 COG0438 Glycosyltransferase - - - 0.00000000000000000000000000000000000000001707 169.0
BYD1_k127_4910460_4 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 1.827e-228 721.0
BYD1_k127_4910460_40 - - - - 0.0000000000000000000000000000000000000008964 159.0
BYD1_k127_4910460_41 Protein of unknown function (DUF2782) - - - 0.000000000000000000000000000000000002957 140.0
BYD1_k127_4910460_42 -O-antigen K02847,K21003 - - 0.000000000000000000000000000000000151 148.0
BYD1_k127_4910460_43 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000002386 144.0
BYD1_k127_4910460_44 Belongs to the UPF0250 family K09158 - - 0.0000000000000000000000000000000004442 132.0
BYD1_k127_4910460_45 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000000000000000000001095 132.0
BYD1_k127_4910460_46 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000005176 132.0
BYD1_k127_4910460_47 SprA-related family - - - 0.00000000000000000000000000001213 123.0
BYD1_k127_4910460_48 - - - - 0.000000000000000000000002664 111.0
BYD1_k127_4910460_49 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000000000000000001045 99.0
BYD1_k127_4910460_5 ribonuclease, Rne Rng family K08301 - - 1.715e-223 702.0
BYD1_k127_4910460_6 Rod shape-determining protein MreB K03569 - - 1.584e-204 648.0
BYD1_k127_4910460_7 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 514.0
BYD1_k127_4910460_8 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 505.0
BYD1_k127_4910460_9 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 465.0
BYD1_k127_4948373_0 oligoendopeptidase F K08602 - - 3.921e-227 720.0
BYD1_k127_4948373_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 617.0
BYD1_k127_4948373_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006802 292.0
BYD1_k127_4948373_3 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002078 281.0
BYD1_k127_4948373_4 Domain of unknown function (DUF1842) - - - 0.0000000000000000000000000000000000000000000000000000000000006232 214.0
BYD1_k127_4948373_5 Acetyltransferase (GNAT) domain K03830 - - 0.00000000000000000000000000000000000000000000008097 174.0
BYD1_k127_4948373_6 OmpA-like transmembrane domain - - - 0.0000000000000000003124 96.0
BYD1_k127_4948373_7 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.000000000000000001357 95.0
BYD1_k127_4959955_0 CobB/CobQ-like glutamine amidotransferase domain K02224 - 6.3.5.11,6.3.5.9 4.584e-194 619.0
BYD1_k127_4959955_1 Putative ATP-dependent DNA helicase recG C-terminal K03655 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 548.0
BYD1_k127_4959955_10 abc-type fe3 -hydroxamate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 344.0
BYD1_k127_4959955_11 Cob(II)yrinic acid a,c-diamide reductase K02303,K04719 - 1.13.11.79,2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004017 338.0
BYD1_k127_4959955_12 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 311.0
BYD1_k127_4959955_13 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 282.0
BYD1_k127_4959955_14 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002385 292.0
BYD1_k127_4959955_15 Penicillin-insensitive murein endopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003025 276.0
BYD1_k127_4959955_16 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005761 251.0
BYD1_k127_4959955_17 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000005047 245.0
BYD1_k127_4959955_18 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002124 226.0
BYD1_k127_4959955_19 ABC-type amino acid transport signal transduction systems, periplasmic component domain K02030 - - 0.00000000000000000000000000000000000000000000001186 182.0
BYD1_k127_4959955_2 Histidine kinase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 526.0
BYD1_k127_4959955_20 Outer membrane protein V K07274 - - 0.0000000000000000000000000000000000000000002171 168.0
BYD1_k127_4959955_21 belongs to the bacterial solute-binding protein 3 family K02030,K10022 - - 0.00000000000000000000000000000000000001298 154.0
BYD1_k127_4959955_22 Membrane - - - 0.000000000000000000000000000000000276 147.0
BYD1_k127_4959955_23 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000001415 119.0
BYD1_k127_4959955_25 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000002981 108.0
BYD1_k127_4959955_26 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.00000000001048 72.0
BYD1_k127_4959955_27 - K09892 - - 0.00000698 50.0
BYD1_k127_4959955_3 AAA domain K07028 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 498.0
BYD1_k127_4959955_4 Periplasmic binding protein domain K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 485.0
BYD1_k127_4959955_5 TonB dependent receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 496.0
BYD1_k127_4959955_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 423.0
BYD1_k127_4959955_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 390.0
BYD1_k127_4959955_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 399.0
BYD1_k127_4959955_9 (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 386.0
BYD1_k127_4970032_0 Beta-ketoacyl synthase K04786 - - 0.0 2563.0
BYD1_k127_4970032_1 Acyl-CoA synthetase (NDP forming) K09181 - - 0.0 1235.0
BYD1_k127_4970032_10 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.32e-225 703.0
BYD1_k127_4970032_11 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.769e-217 685.0
BYD1_k127_4970032_12 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 7.369e-214 682.0
BYD1_k127_4970032_13 AMP-binding enzyme C-terminal domain - - - 1.613e-211 668.0
BYD1_k127_4970032_14 amino acid K01999 - - 1.352e-208 653.0
BYD1_k127_4970032_15 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 1.738e-205 655.0
BYD1_k127_4970032_16 Peptidase family M3 K01392 - 3.4.24.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 621.0
BYD1_k127_4970032_17 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 584.0
BYD1_k127_4970032_18 Male sterility protein K02473 - 5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 569.0
BYD1_k127_4970032_19 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 556.0
BYD1_k127_4970032_2 TonB dependent receptor K02014 - - 1.252e-311 980.0
BYD1_k127_4970032_20 Cysteine desulfurase K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 506.0
BYD1_k127_4970032_21 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 GO:0003674,GO:0003824,GO:0003952,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008795,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0016884,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0033554,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0050896,GO:0051186,GO:0051188,GO:0051716,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 471.0
BYD1_k127_4970032_22 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005906 473.0
BYD1_k127_4970032_23 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 466.0
BYD1_k127_4970032_24 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 468.0
BYD1_k127_4970032_25 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 458.0
BYD1_k127_4970032_26 non-ribosomal peptide synthetase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003035 442.0
BYD1_k127_4970032_27 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 427.0
BYD1_k127_4970032_28 Belongs to the inositol monophosphatase superfamily K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000872 424.0
BYD1_k127_4970032_29 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003646 433.0
BYD1_k127_4970032_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 6.643e-309 951.0
BYD1_k127_4970032_30 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003823 426.0
BYD1_k127_4970032_31 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 398.0
BYD1_k127_4970032_32 serine acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002836 392.0
BYD1_k127_4970032_33 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 365.0
BYD1_k127_4970032_34 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 362.0
BYD1_k127_4970032_35 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 360.0
BYD1_k127_4970032_36 GTP cyclohydrolase I K01495 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007982 355.0
BYD1_k127_4970032_37 squalene-associated FAD-dependent desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 357.0
BYD1_k127_4970032_38 PFAM TatD-related deoxyribonuclease K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008761 332.0
BYD1_k127_4970032_39 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009366 336.0
BYD1_k127_4970032_4 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 2.657e-307 951.0
BYD1_k127_4970032_40 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 334.0
BYD1_k127_4970032_41 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 321.0
BYD1_k127_4970032_42 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 318.0
BYD1_k127_4970032_43 Methyltransferase small domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 305.0
BYD1_k127_4970032_44 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005617 300.0
BYD1_k127_4970032_45 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 301.0
BYD1_k127_4970032_46 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 291.0
BYD1_k127_4970032_47 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 284.0
BYD1_k127_4970032_48 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001867 281.0
BYD1_k127_4970032_49 PFAM ABC transporter related K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002337 291.0
BYD1_k127_4970032_5 Asparagine synthase K01953 - 6.3.5.4 2.21e-285 889.0
BYD1_k127_4970032_50 Type VI secretion system (T6SS), amidase effector protein 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000106 271.0
BYD1_k127_4970032_51 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004517 261.0
BYD1_k127_4970032_52 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000002342 251.0
BYD1_k127_4970032_53 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.000000000000000000000000000000000000000000000000000000000000000000004511 235.0
BYD1_k127_4970032_54 Type VI secretion system (T6SS), amidase immunity protein - - - 0.00000000000000000000000000000000000000000000000000000000000000006369 225.0
BYD1_k127_4970032_55 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000001545 233.0
BYD1_k127_4970032_56 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000002821 224.0
BYD1_k127_4970032_57 tellurite resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000004372 224.0
BYD1_k127_4970032_58 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000003195 230.0
BYD1_k127_4970032_59 PFAM YaeQ family protein - - - 0.0000000000000000000000000000000000000000000000000000000000002042 217.0
BYD1_k127_4970032_6 Belongs to the ABC transporter superfamily K02031,K02032,K10823,K13896,K15583 - - 3.654e-240 766.0
BYD1_k127_4970032_60 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.000000000000000000000000000000000000000000000000000000004285 202.0
BYD1_k127_4970032_61 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000000000000000000000000000000000000000000000000002397 200.0
BYD1_k127_4970032_62 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000000000000000000003518 196.0
BYD1_k127_4970032_63 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000000003109 194.0
BYD1_k127_4970032_64 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000000000000006832 186.0
BYD1_k127_4970032_65 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000016 198.0
BYD1_k127_4970032_66 Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000008989 181.0
BYD1_k127_4970032_67 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000000005131 181.0
BYD1_k127_4970032_68 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000000000000000000000001292 149.0
BYD1_k127_4970032_69 FeS assembly protein IscX - - - 0.0000000000000000000000000000006084 124.0
BYD1_k127_4970032_7 UDP binding domain - - - 1.303e-238 742.0
BYD1_k127_4970032_70 Phosphopantetheine attachment site - - - 0.00000000000000000000002233 101.0
BYD1_k127_4970032_71 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000939 106.0
BYD1_k127_4970032_72 - - - - 0.000000000000000000002813 110.0
BYD1_k127_4970032_73 Parallel beta-helix repeats - - - 0.0000000003114 74.0
BYD1_k127_4970032_8 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 2.989e-236 734.0
BYD1_k127_4970032_9 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 2.33e-230 724.0
BYD1_k127_5160250_0 Polysaccharide deacetylase K01452,K14659,K22278 - 3.5.1.104,3.5.1.41 0.0 1232.0
BYD1_k127_5160250_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1208.0
BYD1_k127_5160250_10 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007556 365.0
BYD1_k127_5160250_11 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004492 355.0
BYD1_k127_5160250_12 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 320.0
BYD1_k127_5160250_13 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 317.0
BYD1_k127_5160250_14 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 316.0
BYD1_k127_5160250_15 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 293.0
BYD1_k127_5160250_16 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001815 270.0
BYD1_k127_5160250_17 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000000000000000000000000000000000007197 224.0
BYD1_k127_5160250_18 COG0350 Methylated DNA-protein cysteine methyltransferase K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000007525 217.0
BYD1_k127_5160250_19 Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000000000000000000000000000000001982 211.0
BYD1_k127_5160250_2 TRAP transporter 4TM 12TM fusion - - - 1.825e-319 990.0
BYD1_k127_5160250_20 Bacterial protein of unknown function (DUF934) - - - 0.0000000000000000000000000000000000000000000001176 175.0
BYD1_k127_5160250_21 Domain of unknown function (DUF1850) - - - 0.000000000000000000000000000000000002851 158.0
BYD1_k127_5160250_22 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.0000000000000000000000000000000001053 142.0
BYD1_k127_5160250_23 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000001396 151.0
BYD1_k127_5160250_3 Sulfite reductase K00381 - 1.8.1.2 3.221e-252 797.0
BYD1_k127_5160250_4 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 3.244e-197 623.0
BYD1_k127_5160250_5 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 546.0
BYD1_k127_5160250_6 TRAP transporter solute receptor, TAXI family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 440.0
BYD1_k127_5160250_7 Transcriptional regulator K13634 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 422.0
BYD1_k127_5160250_8 Bacterial protein of unknown function (DUF898) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 393.0
BYD1_k127_5160250_9 recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 383.0
BYD1_k127_5207698_0 Aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 568.0
BYD1_k127_5207698_1 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 422.0
BYD1_k127_5207698_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 398.0
BYD1_k127_5207698_3 COG0564 Pseudouridylate synthases, 23S RNA-specific K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006221 325.0
BYD1_k127_5207698_4 membrane protein, hemolysin III homolog K11068 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001388 270.0
BYD1_k127_5207698_5 cytochrome - - - 0.000000000000000000000000000000000000000008313 160.0
BYD1_k127_5207698_6 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000001854 145.0
BYD1_k127_5207698_7 protein tyrosine phosphatase activity K01104 - 3.1.3.48 0.0000000000000000000000000000004525 132.0
BYD1_k127_5207698_8 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000001032 120.0
BYD1_k127_5207698_9 Glycine zipper 2TM domain - - - 0.0000001373 60.0
BYD1_k127_5245907_0 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1609.0
BYD1_k127_5245907_1 His Kinase A (phospho-acceptor) domain - - - 0.0 1241.0
BYD1_k127_5245907_10 5'-nucleotidase K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003936 447.0
BYD1_k127_5245907_11 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 439.0
BYD1_k127_5245907_12 Deoxyguanosinetriphosphate triphosphohydrolase-like protein K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008966 415.0
BYD1_k127_5245907_13 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 309.0
BYD1_k127_5245907_14 ferredoxin--nadp reductase K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 298.0
BYD1_k127_5245907_15 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 289.0
BYD1_k127_5245907_16 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000002926 221.0
BYD1_k127_5245907_17 - - - - 0.00000000000000000000000000000000000000000000000000000000006812 211.0
BYD1_k127_5245907_18 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000001272 206.0
BYD1_k127_5245907_19 nuclease activity K07062 - - 0.00000000000000000000000000000000000000000000003001 174.0
BYD1_k127_5245907_2 Zn-dependent protease with chaperone function - - - 0.0 1087.0
BYD1_k127_5245907_20 Cro/C1-type HTH DNA-binding domain - - - 0.0000000000000000000000000000000003074 134.0
BYD1_k127_5245907_21 - - - - 0.00000000000000000000000000000001062 137.0
BYD1_k127_5245907_22 serine-type endopeptidase activity K07261 - - 0.00000000000000000000000000000001717 133.0
BYD1_k127_5245907_23 DsrC like protein K11179 - - 0.0000000000000000000000000006174 118.0
BYD1_k127_5245907_25 plasmid stabilization protein K21495 - - 0.0000000000000000001345 91.0
BYD1_k127_5245907_26 - - - - 0.00000000000000002947 84.0
BYD1_k127_5245907_3 PD-(D/E)XK nuclease superfamily - - - 0.0 1071.0
BYD1_k127_5245907_4 DNA polymerase III K02342 - 2.7.7.7 9.061e-312 972.0
BYD1_k127_5245907_5 RecB family exonuclease K01144 - 3.1.11.5 7.053e-228 734.0
BYD1_k127_5245907_6 autotransporter-associated beta strand repeat protein K09474 - 3.1.3.2 3.38e-224 713.0
BYD1_k127_5245907_7 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 2.04e-205 649.0
BYD1_k127_5245907_8 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 509.0
BYD1_k127_5245907_9 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000284 468.0
BYD1_k127_5254466_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.0 1079.0
BYD1_k127_5254466_1 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 6.049e-282 887.0
BYD1_k127_5254466_10 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008556 486.0
BYD1_k127_5254466_11 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008394 451.0
BYD1_k127_5254466_12 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 437.0
BYD1_k127_5254466_13 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000026 428.0
BYD1_k127_5254466_14 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 416.0
BYD1_k127_5254466_15 Flagellar basal body rod K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004749 414.0
BYD1_k127_5254466_16 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 415.0
BYD1_k127_5254466_17 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 409.0
BYD1_k127_5254466_18 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401,K03229,K22510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 406.0
BYD1_k127_5254466_19 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 353.0
BYD1_k127_5254466_2 ABC transporter K15738 - - 1.141e-281 877.0
BYD1_k127_5254466_20 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004156 349.0
BYD1_k127_5254466_21 Glycosyl transferase family 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 345.0
BYD1_k127_5254466_22 flagellar basal-body rod protein FlgG - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 333.0
BYD1_k127_5254466_23 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 319.0
BYD1_k127_5254466_24 ADP-ribosylation factor family K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 302.0
BYD1_k127_5254466_25 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008866 299.0
BYD1_k127_5254466_26 sigma factor activity K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004396 265.0
BYD1_k127_5254466_27 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003909 262.0
BYD1_k127_5254466_28 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005572 253.0
BYD1_k127_5254466_29 Bacterial export proteins, family 1 K02421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001661 250.0
BYD1_k127_5254466_3 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 1.256e-257 818.0
BYD1_k127_5254466_30 Belongs to the flagella basal body rod proteins family K02391,K02392 - - 0.000000000000000000000000000000000000000000000000000000000001092 218.0
BYD1_k127_5254466_31 Peptidase M22 glycoprotease K14742 - - 0.000000000000000000000000000000000000000000000000000000000005197 214.0
BYD1_k127_5254466_32 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation - - - 0.0000000000000000000000000000000000000000000000000000000001504 211.0
BYD1_k127_5254466_33 Pfam:TPM - - - 0.000000000000000000000000000000000000000000000000000001365 198.0
BYD1_k127_5254466_34 Bacterial-like globin K06886 - - 0.000000000000000000000000000000000000000000000000002124 186.0
BYD1_k127_5254466_35 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000001083 195.0
BYD1_k127_5254466_36 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001056 184.0
BYD1_k127_5254466_37 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000000000000000000188 163.0
BYD1_k127_5254466_38 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.00000000000000000000000000000000000000006105 155.0
BYD1_k127_5254466_39 bacterial-type flagellum-dependent cell motility K02388 - - 0.000000000000000000000000000000000000103 146.0
BYD1_k127_5254466_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 2.855e-226 709.0
BYD1_k127_5254466_40 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000000000000000000000000001463 143.0
BYD1_k127_5254466_41 TonB C terminal - - - 0.0000000000000000000000000000000000001856 162.0
BYD1_k127_5254466_42 bacterial-type flagellum assembly K02420 - - 0.0000000000000000000000001088 108.0
BYD1_k127_5254466_43 PFAM Uncharacterised protein family UPF0150 - - - 0.0000000000000000000000001401 107.0
BYD1_k127_5254466_44 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000000000000001954 109.0
BYD1_k127_5254466_45 bacterial-type flagellum-dependent cell motility K02387,K02388 - - 0.000000000000000002729 90.0
BYD1_k127_5254466_47 Flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000005975 79.0
BYD1_k127_5254466_48 - - - - 0.00000000000001554 79.0
BYD1_k127_5254466_49 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.00000000000001932 78.0
BYD1_k127_5254466_5 Major Facilitator - - - 2.733e-211 663.0
BYD1_k127_5254466_50 bacterial-type flagellum organization K02279,K02386 - - 0.0000007239 61.0
BYD1_k127_5254466_51 Flagellar motor switch protein FliM K02416 - - 0.00007231 54.0
BYD1_k127_5254466_52 Nodulation protein NolV K02411 - - 0.0006641 50.0
BYD1_k127_5254466_6 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009621 628.0
BYD1_k127_5254466_7 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 612.0
BYD1_k127_5254466_8 ATPase FliI YscN family K02412 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 520.0
BYD1_k127_5254466_9 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 500.0
BYD1_k127_5349901_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1833.0
BYD1_k127_5349901_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 3.474e-234 741.0
BYD1_k127_5349901_10 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 445.0
BYD1_k127_5349901_11 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 410.0
BYD1_k127_5349901_12 Mota tolq exbb proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 362.0
BYD1_k127_5349901_13 Transporter K07238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 338.0
BYD1_k127_5349901_14 Protein of unknown function (DUF3050) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 295.0
BYD1_k127_5349901_15 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007012 297.0
BYD1_k127_5349901_16 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000001131 261.0
BYD1_k127_5349901_17 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000001051 232.0
BYD1_k127_5349901_18 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000003669 222.0
BYD1_k127_5349901_19 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000983 203.0
BYD1_k127_5349901_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 2.385e-232 742.0
BYD1_k127_5349901_20 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000000000000001668 191.0
BYD1_k127_5349901_21 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.0000000000000000000000000000000000000000000000000008758 192.0
BYD1_k127_5349901_22 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000001567 188.0
BYD1_k127_5349901_23 TonB C terminal K03646 - - 0.000000000000000000000000000000000000000000000002397 183.0
BYD1_k127_5349901_24 Biopolymer transport protein ExbD/TolR K03560 - - 0.0000000000000000000000000000000000000001932 163.0
BYD1_k127_5349901_25 Tol-pal system-associated acyl-CoA thioesterase K07107 - - 0.0000000000000000000000000000000000005473 155.0
BYD1_k127_5349901_26 - - - - 0.00000000000000000000000000000000004059 137.0
BYD1_k127_5349901_27 Phosphotransferase System K11189 - - 0.000000000000000000000000000000003075 132.0
BYD1_k127_5349901_28 - - - - 0.0000000000000000000000000000002278 127.0
BYD1_k127_5349901_29 regulator K15773 - - 0.000000000000000000000000009619 112.0
BYD1_k127_5349901_3 C4-dicarboxylate transport system - - - 1.559e-223 700.0
BYD1_k127_5349901_30 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000002084 85.0
BYD1_k127_5349901_4 PFAM HipA domain protein K07154 - 2.7.11.1 2.58e-219 687.0
BYD1_k127_5349901_5 Membrane - - - 6.799e-201 662.0
BYD1_k127_5349901_6 Involved in the tonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 593.0
BYD1_k127_5349901_7 amino acid K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 565.0
BYD1_k127_5349901_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 526.0
BYD1_k127_5349901_9 Ubiquinone biosynthesis hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 484.0
BYD1_k127_5563378_0 glutamine synthetase K01915 - 6.3.1.2 2.25e-264 817.0
BYD1_k127_5563378_1 Aldehyde dehydrogenase family K00130,K09472,K12254 - 1.2.1.54,1.2.1.8,1.2.1.99 6.352e-225 712.0
BYD1_k127_5563378_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 7.152e-212 669.0
BYD1_k127_5563378_3 Protein of unknown function (DUF1329) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008756 522.0
BYD1_k127_5563378_4 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 409.0
BYD1_k127_5563378_5 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 308.0
BYD1_k127_5563378_6 Small Multidrug Resistance protein K03297 - - 0.0000000000000000000000000000000000000000003817 159.0
BYD1_k127_5563378_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000004689 114.0
BYD1_k127_5574114_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 1.649e-229 717.0
BYD1_k127_5574114_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 597.0
BYD1_k127_5574114_10 Zinc-finger domain - - - 0.000000000000000006412 84.0
BYD1_k127_5574114_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 588.0
BYD1_k127_5574114_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 537.0
BYD1_k127_5574114_4 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 451.0
BYD1_k127_5574114_5 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005706 439.0
BYD1_k127_5574114_6 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000854 285.0
BYD1_k127_5574114_7 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001611 229.0
BYD1_k127_5574114_8 (sprot CYCP_CHRVI). CYTOCHROME C IS THE MOST WIDELY OCCURRING BACTERIAL C-TYPE CYTOCHROME. CYTOCHROMES C ARE HIGH-SPIN PROTEINS AND THE HEME HAS NO SIXTH LIGAND. THEIR EXACT FUNCTION IS NOT KNOWN - - - 0.0000000000000000000000000000000000000000000000000000002838 197.0
BYD1_k127_5574114_9 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000138 158.0
BYD1_k127_5601966_0 ABC transporter transmembrane region K12541 - - 0.0 1024.0
BYD1_k127_5601966_1 Belongs to the malate synthase family K01638 - 2.3.3.9 6.629e-271 841.0
BYD1_k127_5601966_10 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000001526 169.0
BYD1_k127_5601966_11 Transcriptional regulator - - - 0.0000000000000000000000000000000002939 132.0
BYD1_k127_5601966_2 Haemolysin-type calcium-binding repeat (2 copies) - - - 1.301e-229 766.0
BYD1_k127_5601966_3 Diguanylate cyclase - - - 5.707e-227 722.0
BYD1_k127_5601966_4 HlyD family secretion protein K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 591.0
BYD1_k127_5601966_5 type I secretion outer membrane protein, TolC family K12543 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 463.0
BYD1_k127_5601966_6 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000002129 260.0
BYD1_k127_5601966_7 Bacterial transglutaminase-like cysteine proteinase BTLCP - - - 0.0000000000000000000000000000000000000000000000000000000000003597 234.0
BYD1_k127_5601966_8 cytochrome c-type protein K02569 - - 0.0000000000000000000000000000000000000000000000000000002156 200.0
BYD1_k127_5601966_9 Ethylbenzene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000001962 191.0
BYD1_k127_562134_0 Transglycosylase K05367 - 2.4.1.129 5.754e-308 959.0
BYD1_k127_562134_1 Belongs to the thiolase family K00632 - 2.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 589.0
BYD1_k127_562134_2 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 411.0
BYD1_k127_562134_3 Alpha-2-Macroglobulin K06894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006156 361.0
BYD1_k127_562134_4 - - - - 0.000000001184 66.0
BYD1_k127_5648467_0 PUA-like domain K00958 - 2.7.7.4 5.186e-236 735.0
BYD1_k127_5648467_1 FAD binding domain K00394 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 580.0
BYD1_k127_5648467_10 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000001312 130.0
BYD1_k127_5648467_2 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005325 518.0
BYD1_k127_5648467_3 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 457.0
BYD1_k127_5648467_4 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004435 314.0
BYD1_k127_5648467_5 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000116 264.0
BYD1_k127_5648467_6 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000001471 240.0
BYD1_k127_5648467_7 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000961 237.0
BYD1_k127_5648467_8 Succinate dehydrogenase fumarate reductase, flavoprotein subunit K00394 - 1.8.99.2 0.0000000000000000000000000000000000000000003056 157.0
BYD1_k127_5648467_9 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000002038 166.0
BYD1_k127_5872543_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 5.26e-233 726.0
BYD1_k127_5872543_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 1.863e-227 714.0
BYD1_k127_5872543_10 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000000000000001015 227.0
BYD1_k127_5872543_11 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000000000000000000000000009595 179.0
BYD1_k127_5872543_12 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.00000000000000000000000000000000000000000007615 168.0
BYD1_k127_5872543_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000001044 133.0
BYD1_k127_5872543_14 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.00000000000000000000000000000006594 124.0
BYD1_k127_5872543_15 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000000000003235 121.0
BYD1_k127_5872543_16 diguanylate cyclase activity - - - 0.00000000000000000000000003912 122.0
BYD1_k127_5872543_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 2.36e-204 647.0
BYD1_k127_5872543_3 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 513.0
BYD1_k127_5872543_4 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 494.0
BYD1_k127_5872543_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 442.0
BYD1_k127_5872543_6 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007001 443.0
BYD1_k127_5872543_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008137 352.0
BYD1_k127_5872543_8 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 341.0
BYD1_k127_5872543_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 306.0
BYD1_k127_5920427_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 0.0 1653.0
BYD1_k127_5920427_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1302.0
BYD1_k127_5920427_10 D-arabinono-1,4-lactone oxidase - - - 0.00000000000000000000000000000000000009748 142.0
BYD1_k127_5920427_11 Helix-turn-helix - - - 0.00000000000000000000000000000000007136 138.0
BYD1_k127_5920427_12 - - - - 0.00000000000000000003371 103.0
BYD1_k127_5920427_13 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000004765 93.0
BYD1_k127_5920427_14 Copper binding periplasmic protein CusF K07810 - - 0.000000000000001497 80.0
BYD1_k127_5920427_2 non-ribosomal peptide synthetase - - - 0.0 1276.0
BYD1_k127_5920427_3 COG0480 Translation elongation factors (GTPases) K02355 - - 0.0 1050.0
BYD1_k127_5920427_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798,K15727 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 579.0
BYD1_k127_5920427_5 Alanine racemase, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 542.0
BYD1_k127_5920427_6 Arginase family K01476 - 3.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002827 474.0
BYD1_k127_5920427_7 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 419.0
BYD1_k127_5920427_8 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 412.0
BYD1_k127_5920427_9 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000006778 162.0
BYD1_k127_6178942_0 Asparagine synthase K01953 - 6.3.5.4 3.071e-268 837.0
BYD1_k127_6178942_1 Alginate lyase - - - 1.748e-243 773.0
BYD1_k127_6178942_2 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 1.694e-206 651.0
BYD1_k127_6178942_3 glycolate oxidase iron-sulfur subunit K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 564.0
BYD1_k127_6178942_4 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004359 406.0
BYD1_k127_6178942_5 phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004044 310.0
BYD1_k127_6178942_6 deaminase zinc-binding - - - 0.000000000000000000000000000000000000000000000000000000006356 204.0
BYD1_k127_6178942_7 - - - - 0.00000000000000000000000000000000000000000000004713 179.0
BYD1_k127_6178942_8 Ricin-type beta-trefoil - - - 0.000000000000001553 83.0
BYD1_k127_6178942_9 - - - - 0.00000000000001168 76.0
BYD1_k127_6516652_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1133.0
BYD1_k127_6516652_1 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.0 1121.0
BYD1_k127_6516652_10 cyclic-guanylate-specific phosphodiesterase activity - - - 4.954e-201 653.0
BYD1_k127_6516652_11 AAA ATPase domain - - - 6.725e-196 616.0
BYD1_k127_6516652_12 hydrogenase expression formation protein HypE K04655 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 550.0
BYD1_k127_6516652_13 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 501.0
BYD1_k127_6516652_14 His Kinase A (phosphoacceptor) domain K11527 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 489.0
BYD1_k127_6516652_15 metal-dependent phosphohydrolase HD sub domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 456.0
BYD1_k127_6516652_16 Putative MetA-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 441.0
BYD1_k127_6516652_17 Prokaryotic cytochrome b561 K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 416.0
BYD1_k127_6516652_18 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006148 415.0
BYD1_k127_6516652_19 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 389.0
BYD1_k127_6516652_2 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 1.48e-285 896.0
BYD1_k127_6516652_20 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 385.0
BYD1_k127_6516652_21 RarD protein, DMT superfamily transporter K05786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009105 384.0
BYD1_k127_6516652_22 Pfam:DUF342 K09749 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007595 389.0
BYD1_k127_6516652_23 Helix-turn-helix type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 364.0
BYD1_k127_6516652_24 AAA domain, putative AbiEii toxin, Type IV TA system K02006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 353.0
BYD1_k127_6516652_25 SMART helix-turn-helix domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 345.0
BYD1_k127_6516652_26 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 334.0
BYD1_k127_6516652_27 Domain of unknown function (DUF4276) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000545 302.0
BYD1_k127_6516652_28 Domain of unknown function (DUF4198) K10094 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 294.0
BYD1_k127_6516652_29 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003878 274.0
BYD1_k127_6516652_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 4.652e-258 800.0
BYD1_k127_6516652_30 Hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000194 270.0
BYD1_k127_6516652_31 Transcriptional regulator K07722 - - 0.000000000000000000000000000000000000000000000000000000000000000001777 232.0
BYD1_k127_6516652_32 HupH hydrogenase expression protein, C-terminal conserved region K03618 - - 0.0000000000000000000000000000000000000000000000000000000001876 213.0
BYD1_k127_6516652_33 PhnA Zinc-Ribbon K06193 - - 0.000000000000000000000000000000000000000000000000000000006776 205.0
BYD1_k127_6516652_34 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.000000000000000000000000000000000000000000003571 166.0
BYD1_k127_6516652_35 response to copper ion K01187,K16915 - 3.2.1.20 0.0000000000000000000000000000000000002728 145.0
BYD1_k127_6516652_36 [NiFe]-hydrogenase assembly, chaperone, HybE - - - 0.0000000000000000000000000000001492 129.0
BYD1_k127_6516652_37 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000001001 124.0
BYD1_k127_6516652_38 Hydrogenase expression formation protein (HUPF K04653 - - 0.000000000000000000000001247 108.0
BYD1_k127_6516652_39 Ni,Fe-hydrogenase I large subunit - - - 0.00000000000000000000001064 111.0
BYD1_k127_6516652_4 PAS fold K10715,K20974 - 2.7.13.3 4.54e-231 766.0
BYD1_k127_6516652_40 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000000000009435 99.0
BYD1_k127_6516652_41 Rubredoxin - - - 0.00000000000000000003935 95.0
BYD1_k127_6516652_42 - - - - 0.0000000000000000005667 91.0
BYD1_k127_6516652_43 Protein of unknown function (DUF465) - - - 0.000000000000005172 77.0
BYD1_k127_6516652_44 Protein of unknown function (DUF3617) - - - 0.000000000002767 74.0
BYD1_k127_6516652_45 Histidine Phosphotransfer domain - - - 0.000004726 55.0
BYD1_k127_6516652_46 GDSL-like Lipase/Acylhydrolase - - - 0.0005888 47.0
BYD1_k127_6516652_5 COGs COG1653 ABC-type sugar transport system periplasmic component K02027 - - 2.101e-230 730.0
BYD1_k127_6516652_6 Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane K07791,K07792 - - 8.045e-230 717.0
BYD1_k127_6516652_7 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 2.167e-211 684.0
BYD1_k127_6516652_8 helix_turn_helix gluconate operon transcriptional repressor - - - 4.485e-208 659.0
BYD1_k127_6516652_9 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 3.12e-202 637.0
BYD1_k127_657866_0 Putative exonuclease SbcCD, C subunit - - - 0.0 1516.0
BYD1_k127_657866_1 Ferrous iron transport protein B K04759 - - 9.828e-286 893.0
BYD1_k127_657866_10 PFAM SNF2-related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 351.0
BYD1_k127_657866_11 Domain of unknown function (DUF4194) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 312.0
BYD1_k127_657866_12 PIN domain - - - 0.00000000000000000000000000000000000000000001959 166.0
BYD1_k127_657866_13 PFAM SNF2-related protein - - - 0.0000000000000000000000000091 117.0
BYD1_k127_657866_14 sequence-specific DNA binding - - - 0.0000000000000001579 82.0
BYD1_k127_657866_15 PFAM N-6 DNA methylase K03427 - 2.1.1.72 0.0000000000000003651 78.0
BYD1_k127_657866_16 RHS Repeat - - - 0.00000000000001291 75.0
BYD1_k127_657866_17 PFAM SpoVT AbrB K07172 - - 0.00000000000002414 75.0
BYD1_k127_657866_18 helicase superfamily c-terminal domain - - - 0.0000000000000325 83.0
BYD1_k127_657866_19 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.00000000001609 71.0
BYD1_k127_657866_2 Elongator protein 3, MiaB family, Radical SAM - - - 3.339e-268 835.0
BYD1_k127_657866_3 Protein of unknown function (DUF3375) - - - 3.285e-255 799.0
BYD1_k127_657866_4 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.507e-245 762.0
BYD1_k127_657866_5 Required for chromosome condensation and partitioning K03529 - - 1.708e-227 732.0
BYD1_k127_657866_6 Alpha amylase, catalytic domain K01176 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003483 617.0
BYD1_k127_657866_7 Uncharacterized protein conserved in bacteria N-term (DUF3322) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 576.0
BYD1_k127_657866_8 Virulence protein RhuM family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 561.0
BYD1_k127_657866_9 Pfam:HipA_N K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 396.0
BYD1_k127_6658902_0 belongs to the aldehyde dehydrogenase family K00138 - - 2.561e-309 951.0
BYD1_k127_6658902_1 Transcriptional activator of acetoin glycerol metabolism K21405 - - 3.633e-255 801.0
BYD1_k127_6658902_10 ABC-type Fe3 transport system, periplasmic component K08478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008919 413.0
BYD1_k127_6658902_11 TIGRFAM molybdate ABC transporter K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007009 375.0
BYD1_k127_6658902_12 molybdenum ABC transporter, periplasmic K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002393 362.0
BYD1_k127_6658902_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009695 352.0
BYD1_k127_6658902_14 Belongs to the NadC ModD family K03813 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 335.0
BYD1_k127_6658902_15 TOBE domain K02019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 334.0
BYD1_k127_6658902_16 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 317.0
BYD1_k127_6658902_17 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 315.0
BYD1_k127_6658902_18 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 310.0
BYD1_k127_6658902_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001902 258.0
BYD1_k127_6658902_2 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) K06871 - - 6.118e-219 696.0
BYD1_k127_6658902_20 Protein of unknown function (DUF3644) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003077 272.0
BYD1_k127_6658902_21 NifQ K15790 - - 0.00000000000000000000000000000000000000000000000000000000000006758 220.0
BYD1_k127_6658902_22 Protein of unknown function (DUF779) K09959 - - 0.00000000000000000000000000000000000000000000000000000000001809 213.0
BYD1_k127_6658902_23 - - - - 0.000000000000000000000000000000000000000000000000000000005888 211.0
BYD1_k127_6658902_24 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000001436 194.0
BYD1_k127_6658902_25 type III restriction protein res subunit K01153 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000003525 194.0
BYD1_k127_6658902_26 Belongs to the NifD NifK NifE NifN family K02587 - - 0.00000000000000000000000000000000000000000000000000009089 187.0
BYD1_k127_6658902_27 Quinohemoprotein amine dehydrogenase, gamma subunit - - - 0.000000000000000000000000000000000000000000000000000777 185.0
BYD1_k127_6658902_28 Protein of unknown function, DUF488 - - - 0.00000000000000000000000000000000000001602 149.0
BYD1_k127_6658902_29 - - - - 0.0000000000000000000000000000000125 130.0
BYD1_k127_6658902_3 TonB-dependent receptor K02014 - - 8.374e-216 689.0
BYD1_k127_6658902_30 Transcriptional regulator - - - 0.0000000000000000000000004645 109.0
BYD1_k127_6658902_31 Hemerythrin-like metal-binding protein K07216 - - 0.0000000000000000000000005127 113.0
BYD1_k127_6658902_32 NifZ domain K02597 - - 0.000000000000000000005811 108.0
BYD1_k127_6658902_33 amino acid transport K02030 - - 0.00000000000000000001015 102.0
BYD1_k127_6658902_34 Nuclease-related domain - - - 0.0000005188 54.0
BYD1_k127_6658902_35 type I restriction modification DNA specificity domain K01154,K03427 - 2.1.1.72,3.1.21.3 0.00006322 51.0
BYD1_k127_6658902_36 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0007513 51.0
BYD1_k127_6658902_4 Quinohemoprotein amine dehydrogenase, alpha subunit domain II K08685 - 1.4.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002823 604.0
BYD1_k127_6658902_5 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 599.0
BYD1_k127_6658902_6 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 587.0
BYD1_k127_6658902_7 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 555.0
BYD1_k127_6658902_8 quinohemoprotein amine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 518.0
BYD1_k127_6658902_9 TOBE domain K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 497.0
BYD1_k127_6934995_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0 1020.0
BYD1_k127_6934995_1 Cytochrome c7 and related cytochrome c - - - 2.248e-267 858.0
BYD1_k127_6934995_10 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 384.0
BYD1_k127_6934995_11 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 365.0
BYD1_k127_6934995_12 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 302.0
BYD1_k127_6934995_13 COG0564 Pseudouridylate synthases, 23S RNA-specific K06175 - 5.4.99.26 0.0000000000000000000000000000000000000000000006477 169.0
BYD1_k127_6934995_14 cytochrome complex assembly K02200 - - 0.0000000000000000000001745 105.0
BYD1_k127_6934995_15 Acylphosphatase K01512 - 3.6.1.7 0.00000000000000000004792 98.0
BYD1_k127_6934995_2 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 4.886e-241 760.0
BYD1_k127_6934995_3 FAD dependent oxidoreductase K07077 - - 5.936e-236 740.0
BYD1_k127_6934995_4 heat shock protein binding - - - 8.694e-235 744.0
BYD1_k127_6934995_5 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 7.346e-219 703.0
BYD1_k127_6934995_6 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 569.0
BYD1_k127_6934995_7 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009551 548.0
BYD1_k127_6934995_8 COG1982 Arginine lysine ornithine decarboxylases K01584 - 4.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 530.0
BYD1_k127_6934995_9 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009118 407.0
BYD1_k127_7250105_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 1.025e-277 869.0
BYD1_k127_7250105_1 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 437.0
BYD1_k127_7250105_2 Protein of unknown function (DUF4197) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002953 271.0
BYD1_k127_7250105_3 RelE-like toxin of type II toxin-antitoxin system HigB K07334 - - 0.000000000000000000000000000000000000000000005326 164.0
BYD1_k127_7250105_4 cb-type cytochrome c oxidase subunit III - - - 0.000000000000000000000000000000000000001171 156.0
BYD1_k127_7250105_5 TIGRFAM addiction module antidote protein, HigA family K21498 - - 0.000000000000000000000000000000000000003613 147.0
BYD1_k127_7250105_6 - - - - 0.0000000000000000000004906 97.0
BYD1_k127_7354307_0 PAC sensor-containing diguanylate cyclase phosphodiesterase - - - 0.0 1045.0
BYD1_k127_7354307_1 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 8.311e-286 889.0
BYD1_k127_7354307_10 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 607.0
BYD1_k127_7354307_11 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 604.0
BYD1_k127_7354307_12 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004555 542.0
BYD1_k127_7354307_13 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 547.0
BYD1_k127_7354307_14 Zn-dependent protease with chaperone function K06013 - 3.4.24.84 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 517.0
BYD1_k127_7354307_15 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 508.0
BYD1_k127_7354307_16 COG2202 FOG PAS PAC domain K03776 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 496.0
BYD1_k127_7354307_17 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 481.0
BYD1_k127_7354307_18 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006691 481.0
BYD1_k127_7354307_19 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 477.0
BYD1_k127_7354307_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.168e-267 829.0
BYD1_k127_7354307_20 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003756 430.0
BYD1_k127_7354307_21 Nad-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002793 421.0
BYD1_k127_7354307_22 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 389.0
BYD1_k127_7354307_23 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 402.0
BYD1_k127_7354307_24 Beta-lactamase K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007068 368.0
BYD1_k127_7354307_25 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005734 365.0
BYD1_k127_7354307_26 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 351.0
BYD1_k127_7354307_27 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 341.0
BYD1_k127_7354307_28 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 323.0
BYD1_k127_7354307_29 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 285.0
BYD1_k127_7354307_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.69e-243 756.0
BYD1_k127_7354307_30 Domain of unknown function (DUF4166) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004295 280.0
BYD1_k127_7354307_31 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002292 270.0
BYD1_k127_7354307_32 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000002066 264.0
BYD1_k127_7354307_33 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008989 269.0
BYD1_k127_7354307_34 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000003705 258.0
BYD1_k127_7354307_35 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004886 255.0
BYD1_k127_7354307_36 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003819 246.0
BYD1_k127_7354307_37 Diguanylate cyclase K13069,K21021 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000001524 255.0
BYD1_k127_7354307_38 PIN domain - - - 0.000000000000000000000000000000000000000000000000000000000000003857 218.0
BYD1_k127_7354307_39 Aspartyl protease K06985 - - 0.000000000000000000000000000000000000000000000000000000000001896 216.0
BYD1_k127_7354307_4 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 6.326e-243 755.0
BYD1_k127_7354307_40 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000002665 216.0
BYD1_k127_7354307_41 CBS domain - - - 0.0000000000000000000000000000000000000000000000000000001379 198.0
BYD1_k127_7354307_42 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000000003518 196.0
BYD1_k127_7354307_43 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000003873 188.0
BYD1_k127_7354307_44 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.00000000000000000000000000000000000000000000000007862 179.0
BYD1_k127_7354307_45 Sporulation related domain K03749 - - 0.0000000000000000000000000000000000000000000006556 174.0
BYD1_k127_7354307_46 colicin V production K03558 - - 0.000000000000000000000000000000000000000000001085 175.0
BYD1_k127_7354307_47 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000005954 159.0
BYD1_k127_7354307_48 SpoVT / AbrB like domain - - - 0.00000000000000000000000000000000000000006707 152.0
BYD1_k127_7354307_49 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000000000009662 131.0
BYD1_k127_7354307_5 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 4.071e-238 738.0
BYD1_k127_7354307_50 Domain of unknown function (DUF4405) - - - 0.000000000000000000000000000000003833 134.0
BYD1_k127_7354307_51 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000000005531 126.0
BYD1_k127_7354307_52 diol metabolic process K01724 - 4.2.1.96 0.00000000000000000000000000000005802 128.0
BYD1_k127_7354307_53 Protein of unknown function (DUF2788) - - - 0.0000000000000000000000001402 110.0
BYD1_k127_7354307_54 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates - - - 0.000000000000000000005655 100.0
BYD1_k127_7354307_55 SEC-C motif - - - 0.00000000000000000001367 92.0
BYD1_k127_7354307_56 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.0000000004579 59.0
BYD1_k127_7354307_57 - - - - 0.00000002081 63.0
BYD1_k127_7354307_6 Belongs to the thiolase family K00626 - 2.3.1.9 6.432e-216 675.0
BYD1_k127_7354307_7 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 8.481e-202 635.0
BYD1_k127_7354307_8 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 2.909e-199 624.0
BYD1_k127_7354307_9 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 1.428e-196 616.0
BYD1_k127_7407501_0 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 3.753e-211 662.0
BYD1_k127_7407501_1 May be involved in the formation or repair of Fe-S clusters present in iron-sulfur proteins K13819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 454.0
BYD1_k127_7407501_10 Rop-like - - - 0.0000000000000000000000003952 113.0
BYD1_k127_7407501_11 RHS Repeat - - - 0.000000000000002635 77.0
BYD1_k127_7407501_2 Belongs to the NifD NifK NifE NifN family K02592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 401.0
BYD1_k127_7407501_3 Protein of unknown function, DUF269 - - - 0.000000000000000000000000000000000000000000000000000000000000000000003771 237.0
BYD1_k127_7407501_4 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000000000000000000119 210.0
BYD1_k127_7407501_5 Ferredoxin - - - 0.000000000000000000000000000000000000000000000001613 177.0
BYD1_k127_7407501_6 Pfam Dinitrogenase iron-molybdenum cofactor K02596 - - 0.0000000000000000000000000000000000000000000008325 171.0
BYD1_k127_7407501_7 Iron-sulphur cluster biosynthesis - - - 0.00000000000000000000000000000000000008764 145.0
BYD1_k127_7407501_8 4Fe-4S double cluster binding domain - - - 0.0000000000000000000000000000001552 125.0
BYD1_k127_7407501_9 - - - - 0.000000000000000000000000000001305 125.0
BYD1_k127_7527249_0 formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1551.0
BYD1_k127_7527249_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1367.0
BYD1_k127_7527249_10 Belongs to the radical SAM superfamily. PqqE family K06139 - - 3.366e-194 612.0
BYD1_k127_7527249_11 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005776 594.0
BYD1_k127_7527249_12 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 GO:0000731,GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016604,GO:0016607,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019985,GO:0031974,GO:0031981,GO:0032991,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0035770,GO:0036464,GO:0042276,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1990904 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 555.0
BYD1_k127_7527249_13 COG0294 Dihydropteroate synthase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 552.0
BYD1_k127_7527249_14 PFAM sigma-54 factor interaction domain-containing protein K21405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 540.0
BYD1_k127_7527249_15 chorismate binding enzyme K01665,K02619,K03342,K13503,K13950 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.6.1.85,4.1.3.27,4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 535.0
BYD1_k127_7527249_16 May be involved in the transport of PQQ or its precursor to the periplasm K06136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 500.0
BYD1_k127_7527249_17 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 482.0
BYD1_k127_7527249_18 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 456.0
BYD1_k127_7527249_19 synthesis protein K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005306 450.0
BYD1_k127_7527249_2 PQQ-like domain - - - 0.0 1029.0
BYD1_k127_7527249_20 MCM2/3/5 family K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009068 454.0
BYD1_k127_7527249_21 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 439.0
BYD1_k127_7527249_22 Ring cyclization and eight-electron oxidation of 3a-(2- amino-2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline- 7,9-dicarboxylic-acid to PQQ K06137 - 1.3.3.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 426.0
BYD1_k127_7527249_23 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 430.0
BYD1_k127_7527249_24 Catalyzes the transfer of a formyl group from 5-formyl tetrahydromethanopterin (5-formyl-H(4)MPT) to methanofuran (MFR) so as to produce formylmethanofuran (formyl-MFR) and tetrahydromethanopterin (H(4)MPT) K00672 - 2.3.1.101 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 415.0
BYD1_k127_7527249_25 TonB-dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 419.0
BYD1_k127_7527249_26 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000078 377.0
BYD1_k127_7527249_27 TIGRFAM 40-residue YVTN family beta-propeller repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 377.0
BYD1_k127_7527249_28 Catalyzes the hydrolysis of methenyl-H(4)MPT( ) to 5- formyl-H(4)MPT K01499 - 3.5.4.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 371.0
BYD1_k127_7527249_29 Periplasmic sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 376.0
BYD1_k127_7527249_3 COG0210 Superfamily I DNA and RNA helicases K03657 - 3.6.4.12 0.0 1018.0
BYD1_k127_7527249_30 transcriptional regulator K11921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 353.0
BYD1_k127_7527249_31 Domain of unknown function (DUF3391) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 352.0
BYD1_k127_7527249_32 Transposase DDE domain K07487 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 346.0
BYD1_k127_7527249_33 DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003662 346.0
BYD1_k127_7527249_34 Methylene-tetrahydromethanopterin dehydrogenase, N-terminal K10714 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 327.0
BYD1_k127_7527249_35 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 328.0
BYD1_k127_7527249_36 GAF domain K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006681 331.0
BYD1_k127_7527249_37 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007347 324.0
BYD1_k127_7527249_38 PFAM Formaldehyde-activating enzyme (Fae) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002652 314.0
BYD1_k127_7527249_39 pectinesterase activity K01224,K03932 - 3.2.1.89 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 308.0
BYD1_k127_7527249_4 Major Facilitator Superfamily - - - 6.421e-310 954.0
BYD1_k127_7527249_40 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 318.0
BYD1_k127_7527249_41 Sulphur oxidation protein SoxZ K17226 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 312.0
BYD1_k127_7527249_42 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 301.0
BYD1_k127_7527249_43 Hydantoinase/oxoprolinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 306.0
BYD1_k127_7527249_44 formaldehyde-activating enzyme K10713 - 4.2.1.147 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 298.0
BYD1_k127_7527249_45 TIGRFAM beta-ribofuranosylaminobenzene 5'-phosphate synthase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 297.0
BYD1_k127_7527249_46 Diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000035 301.0
BYD1_k127_7527249_47 SMART extracellular solute-binding protein, family 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 289.0
BYD1_k127_7527249_48 histidine kinase HAMP region domain protein K07675 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000412 293.0
BYD1_k127_7527249_49 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379,K18360 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003023 286.0
BYD1_k127_7527249_5 TonB dependent receptor - - - 1.799e-280 882.0
BYD1_k127_7527249_50 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005165 274.0
BYD1_k127_7527249_51 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002403 273.0
BYD1_k127_7527249_52 PFAM response regulator receiver K07689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004225 260.0
BYD1_k127_7527249_53 esterase of the alpha beta hydrolase fold K07002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006996 252.0
BYD1_k127_7527249_54 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000138 252.0
BYD1_k127_7527249_55 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001117 226.0
BYD1_k127_7527249_56 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000005383 231.0
BYD1_k127_7527249_57 ATP:dephospho-CoA triphosphoribosyl transferase K05966 - 2.4.2.52 0.00000000000000000000000000000000000000000000000000000000000000146 229.0
BYD1_k127_7527249_58 Protein of unknown function (DUF447) K09154 - - 0.00000000000000000000000000000000000000000000000000000000000003126 219.0
BYD1_k127_7527249_59 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000001122 217.0
BYD1_k127_7527249_6 TonB dependent receptor K02014 - - 2.639e-252 798.0
BYD1_k127_7527249_60 Flavoprotein - - - 0.000000000000000000000000000000000000000000000000000000000001991 222.0
BYD1_k127_7527249_61 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K14160 - - 0.000000000000000000000000000000000000000000000000000000000005922 216.0
BYD1_k127_7527249_62 TIGRFAM formylmethanofuran dehydrogenase subunit B K00201 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000004657 222.0
BYD1_k127_7527249_63 PFAM Response regulator receiver domain K07689 - - 0.00000000000000000000000000000000000000000000000000000000127 209.0
BYD1_k127_7527249_64 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000001846 206.0
BYD1_k127_7527249_65 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000002363 210.0
BYD1_k127_7527249_66 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) - - - 0.0000000000000000000000000000000000000000000000000000007586 199.0
BYD1_k127_7527249_67 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000002422 207.0
BYD1_k127_7527249_68 ATP-grasp domain - - - 0.0000000000000000000000000000000000000000000000000000027 208.0
BYD1_k127_7527249_69 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000001746 197.0
BYD1_k127_7527249_7 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124 - - 6.342e-236 739.0
BYD1_k127_7527249_70 Thioredoxin-like [2Fe-2S] ferredoxin K00127 - - 0.00000000000000000000000000000000000000000000000000005062 190.0
BYD1_k127_7527249_71 Histidine biosynthesis protein K01814 - 5.3.1.16 0.000000000000000000000000000000000000000000002125 174.0
BYD1_k127_7527249_72 - - - - 0.00000000000000000000000000000000000000000376 160.0
BYD1_k127_7527249_73 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000002489 153.0
BYD1_k127_7527249_74 PFAM glutamate synthase alpha subunit domain protein K00202 GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0044237,GO:0044281 1.2.7.12 0.000000000000000000000000000000000000003736 165.0
BYD1_k127_7527249_75 Pfam:DUF556 - - - 0.000000000000000000000000000000000005885 151.0
BYD1_k127_7527249_76 - - - - 0.00000000000000000000000000000000003236 138.0
BYD1_k127_7527249_77 - - - - 0.000000000000000000000000000000007534 136.0
BYD1_k127_7527249_78 - - - - 0.0000000000000000000000000000000364 129.0
BYD1_k127_7527249_79 Amino acid kinase family - - - 0.0000000000000000000000000000003813 140.0
BYD1_k127_7527249_8 Amidohydrolase family K00200 - 1.2.7.12 4.582e-233 743.0
BYD1_k127_7527249_80 Protein of unknown function (DUF2380) - - - 0.0000000000000000000000000000818 122.0
BYD1_k127_7527249_81 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000001186 121.0
BYD1_k127_7527249_82 Psort location Cytoplasmic, score - - - 0.00000000000000000000000008426 109.0
BYD1_k127_7527249_83 Coenzyme PQQ synthesis protein D (PqqD) K06138 - - 0.0000000000000000000000002929 116.0
BYD1_k127_7527249_84 - - - - 0.000000000000000000000019 103.0
BYD1_k127_7527249_85 - - - - 0.000000000000000000002336 97.0
BYD1_k127_7527249_86 Domain of unknown function (DUF4154) - - - 0.000000000000003535 83.0
BYD1_k127_7527249_87 TIGRFAM TonB family protein K03832 - - 0.00000000000001927 82.0
BYD1_k127_7527249_88 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.00000000000002126 83.0
BYD1_k127_7527249_9 MOFRL family K11529 - 2.7.1.165 9.385e-201 634.0
BYD1_k127_7527249_90 - - - - 0.0000005841 57.0
BYD1_k127_7593571_0 Alpha-2-Macroglobulin - - - 0.0 1906.0
BYD1_k127_7593571_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1099.0
BYD1_k127_7593571_10 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 531.0
BYD1_k127_7593571_11 DNA-damage-inducible protein d K14623 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 486.0
BYD1_k127_7593571_12 PpiC-type peptidyl-prolyl cis-trans isomerase K01802,K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 297.0
BYD1_k127_7593571_13 NifZ domain K02597 - - 0.000000000000000000000000000000000000000000000000000000002038 208.0
BYD1_k127_7593571_14 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000000000000001069 149.0
BYD1_k127_7593571_15 DEAD-like helicase, N-terminal - - - 0.0000000000000000000000000000002585 126.0
BYD1_k127_7593571_16 PFAM Haemerythrin HHE cation-binding motif K07216 - - 0.0000000000000000000000000002424 126.0
BYD1_k127_7593571_17 Protein of unknown function (DUF3301) - - - 0.0000000000000000000000003039 109.0
BYD1_k127_7593571_18 May protect the nitrogenase Fe-Mo protein from oxidative damage K02595 - - 0.00000000000000000000004894 103.0
BYD1_k127_7593571_19 - - - - 0.000000000000005975 79.0
BYD1_k127_7593571_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1082.0
BYD1_k127_7593571_20 Adenine specific DNA methylase Mod K07316 - 2.1.1.72 0.000000000644 61.0
BYD1_k127_7593571_3 Lysozyme inhibitor LprI - - - 0.0 1078.0
BYD1_k127_7593571_4 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 2.685e-243 759.0
BYD1_k127_7593571_5 Uncharacterized protein conserved in bacteria (DUF2130) - - - 4.215e-210 661.0
BYD1_k127_7593571_6 AAA ATPase domain - - - 4.183e-203 649.0
BYD1_k127_7593571_7 penicillin-binding protein K05367 - 2.4.1.129 8.381e-202 655.0
BYD1_k127_7593571_8 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 637.0
BYD1_k127_7593571_9 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 554.0
BYD1_k127_7599410_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1486.0
BYD1_k127_7599410_1 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1240.0
BYD1_k127_7599410_10 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 1.036e-235 745.0
BYD1_k127_7599410_11 Citrate transporter - - - 7.519e-233 725.0
BYD1_k127_7599410_12 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 1.293e-224 699.0
BYD1_k127_7599410_13 HI0933-like protein K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 570.0
BYD1_k127_7599410_14 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 511.0
BYD1_k127_7599410_15 Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity K14540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003288 447.0
BYD1_k127_7599410_16 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 361.0
BYD1_k127_7599410_17 metal-dependent phosphoesterases (PHP family) K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 354.0
BYD1_k127_7599410_18 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 351.0
BYD1_k127_7599410_19 Peptidase M50 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002906 328.0
BYD1_k127_7599410_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1123.0
BYD1_k127_7599410_20 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 331.0
BYD1_k127_7599410_21 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001838 334.0
BYD1_k127_7599410_22 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 322.0
BYD1_k127_7599410_23 Belongs to the SUA5 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 306.0
BYD1_k127_7599410_24 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005373 273.0
BYD1_k127_7599410_25 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005119 263.0
BYD1_k127_7599410_26 Flagellar regulatory protein FleQ - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001292 246.0
BYD1_k127_7599410_27 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000007357 235.0
BYD1_k127_7599410_28 Glycine cleavage system regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000002489 216.0
BYD1_k127_7599410_29 Required for maturation of 30S ribosomal subunits K09748 - - 0.0000000000000000000000000000000000000000000000000000000008775 205.0
BYD1_k127_7599410_3 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1095.0
BYD1_k127_7599410_30 - - - - 0.00000000000000000000000000000000000000000000000000000003567 205.0
BYD1_k127_7599410_31 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000000000000000003325 195.0
BYD1_k127_7599410_32 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000001188 186.0
BYD1_k127_7599410_33 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000004087 157.0
BYD1_k127_7599410_34 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000007688 156.0
BYD1_k127_7599410_35 HEAT repeats - - - 0.00000000000000000000000000000000000009731 146.0
BYD1_k127_7599410_36 - - - - 0.000000000000000000000000000001679 129.0
BYD1_k127_7599410_37 Biotin-requiring enzyme - - - 0.0000000000000000000000000004053 118.0
BYD1_k127_7599410_38 general secretion pathway protein K10924 - - 0.000000000000000000000001642 111.0
BYD1_k127_7599410_39 Putative addiction module component - - - 0.0000000000000002594 81.0
BYD1_k127_7599410_4 ABC transporter K06020 - 3.6.3.25 9.686e-315 969.0
BYD1_k127_7599410_40 Fic/DOC family - - - 0.00000009817 57.0
BYD1_k127_7599410_5 Collagenase K08303 - - 3.315e-302 938.0
BYD1_k127_7599410_6 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 8.849e-269 842.0
BYD1_k127_7599410_7 MASE1 - - - 6.603e-246 769.0
BYD1_k127_7599410_8 Participates in both transcription termination and antitermination K02600 - - 4.419e-243 758.0
BYD1_k127_7599410_9 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 4.028e-238 741.0
BYD1_k127_7660777_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 3.741e-196 616.0
BYD1_k127_7660777_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 425.0
BYD1_k127_7660777_2 preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000000000003561 157.0
BYD1_k127_7660777_3 nucleic acid-binding protein contains PIN domain - - - 0.00000000000000000001995 99.0
BYD1_k127_7660777_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000017 50.0
BYD1_k127_7674385_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1023.0
BYD1_k127_7674385_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 2.772e-313 972.0
BYD1_k127_7674385_10 spore germination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 463.0
BYD1_k127_7674385_11 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 441.0
BYD1_k127_7674385_12 pfkB family carbohydrate kinase K03272,K21344 - 2.7.1.167,2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 434.0
BYD1_k127_7674385_13 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 355.0
BYD1_k127_7674385_14 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 336.0
BYD1_k127_7674385_15 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001768 347.0
BYD1_k127_7674385_16 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 294.0
BYD1_k127_7674385_17 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003581 313.0
BYD1_k127_7674385_18 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001247 270.0
BYD1_k127_7674385_19 Pectate lyase K01732 - 4.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000005968 269.0
BYD1_k127_7674385_2 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.787e-312 962.0
BYD1_k127_7674385_20 UPF0114 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000006671 233.0
BYD1_k127_7674385_21 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000007467 205.0
BYD1_k127_7674385_22 ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000005347 217.0
BYD1_k127_7674385_23 PFAM Signal transduction response regulator, receiver K13041 - - 0.0000000000000000000000000000000000000000000000009484 182.0
BYD1_k127_7674385_24 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000000001747 171.0
BYD1_k127_7674385_25 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000003051 167.0
BYD1_k127_7674385_27 Ricin-type beta-trefoil - - - 0.00000000000000000000000004596 125.0
BYD1_k127_7674385_28 Lipopolysaccharide assembly protein A domain K08992 - - 0.0000000001983 65.0
BYD1_k127_7674385_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 2.983e-293 912.0
BYD1_k127_7674385_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 4.553e-242 752.0
BYD1_k127_7674385_5 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003988 553.0
BYD1_k127_7674385_6 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006849 531.0
BYD1_k127_7674385_7 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 503.0
BYD1_k127_7674385_8 aminopeptidase N K01256 - 3.4.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 526.0
BYD1_k127_7674385_9 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 502.0
BYD1_k127_772083_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 8.575e-232 723.0
BYD1_k127_772083_1 AMP-binding enzyme C-terminal domain K18661 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 623.0
BYD1_k127_772083_10 abc transporter atp-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 319.0
BYD1_k127_772083_11 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 312.0
BYD1_k127_772083_12 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 312.0
BYD1_k127_772083_13 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 308.0
BYD1_k127_772083_14 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000189 256.0
BYD1_k127_772083_15 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000001516 231.0
BYD1_k127_772083_16 Tripartite ATP-independent periplasmic transporters, DctQ component K11689,K21394 - - 0.0000000000000000000000000000000000000000000000000000000000007703 215.0
BYD1_k127_772083_17 sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000000000000004542 159.0
BYD1_k127_772083_18 PFAM PsiF repeat protein - - - 0.0000000000000000000000552 106.0
BYD1_k127_772083_19 Modulates RecA activity K03565 - - 0.00000000000000000002718 99.0
BYD1_k127_772083_2 AmpG muropeptide MFS transporter K08218 K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003476 597.0
BYD1_k127_772083_3 PFAM aminotransferase class V K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 562.0
BYD1_k127_772083_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 538.0
BYD1_k127_772083_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 512.0
BYD1_k127_772083_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002149 494.0
BYD1_k127_772083_7 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 449.0
BYD1_k127_772083_8 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 446.0
BYD1_k127_772083_9 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003077 417.0
BYD1_k127_7734128_0 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 1.617e-314 974.0
BYD1_k127_7734128_1 chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 616.0
BYD1_k127_7734128_2 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007744 339.0
BYD1_k127_7734128_3 Glycosyl transferase family 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 341.0
BYD1_k127_7734128_4 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000001894 233.0
BYD1_k127_7734128_5 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000000003161 184.0
BYD1_k127_7734128_6 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000000000002993 151.0
BYD1_k127_7755708_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2246.0
BYD1_k127_7755708_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1177.0
BYD1_k127_7755708_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000000000000000002067 186.0
BYD1_k127_7801659_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB - - - 0.0 1131.0
BYD1_k127_7801659_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 7.206e-233 725.0
BYD1_k127_7801659_10 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005468 425.0
BYD1_k127_7801659_11 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 398.0
BYD1_k127_7801659_12 CHAD domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000405 387.0
BYD1_k127_7801659_13 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007697 364.0
BYD1_k127_7801659_14 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 341.0
BYD1_k127_7801659_15 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 312.0
BYD1_k127_7801659_16 Membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 314.0
BYD1_k127_7801659_17 (FHA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001445 270.0
BYD1_k127_7801659_18 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003462 263.0
BYD1_k127_7801659_19 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000009097 201.0
BYD1_k127_7801659_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 7.437e-229 711.0
BYD1_k127_7801659_20 phosphohistidine phosphatase, SixA K08296 - - 0.000000000000000000000000000000000000000000000000005765 186.0
BYD1_k127_7801659_21 - - - - 0.0000000000000000000000000000000000000000000000007291 197.0
BYD1_k127_7801659_22 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000000000000000006862 160.0
BYD1_k127_7801659_23 GtrA-like protein - - - 0.000000000000000000000000000004194 123.0
BYD1_k127_7801659_24 diguanylate cyclase activity - - - 0.000000000000000000000000002266 128.0
BYD1_k127_7801659_25 GtrA-like protein - - - 0.0000000000000006085 82.0
BYD1_k127_7801659_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 3.889e-204 646.0
BYD1_k127_7801659_4 MacB-like periplasmic core domain K02004 - - 1.276e-197 629.0
BYD1_k127_7801659_5 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000589 616.0
BYD1_k127_7801659_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 577.0
BYD1_k127_7801659_7 5'-nucleotidase, C-terminal domain K11751,K17224 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 544.0
BYD1_k127_7801659_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008262 461.0
BYD1_k127_7801659_9 Pfam Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002242 429.0
BYD1_k127_7829729_0 acyl-CoA dehydrogenase - GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 434.0
BYD1_k127_7855608_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1104.0
BYD1_k127_7855608_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 8.946e-293 907.0
BYD1_k127_7855608_10 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008939 295.0
BYD1_k127_7855608_11 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 297.0
BYD1_k127_7855608_12 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002709 283.0
BYD1_k127_7855608_13 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001417 274.0
BYD1_k127_7855608_14 redox protein, regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000008718 233.0
BYD1_k127_7855608_15 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.00000000000000000000000000000000000000000000000000000000000000002386 225.0
BYD1_k127_7855608_16 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000000000000000000000000001171 210.0
BYD1_k127_7855608_17 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000001405 190.0
BYD1_k127_7855608_18 NUDIX domain K08310 - 3.6.1.67 0.00000000000000000000000000000000000000000000000000003737 194.0
BYD1_k127_7855608_19 Barstar (barnase inhibitor) - - - 0.0000000000000000000000000000000000001216 149.0
BYD1_k127_7855608_2 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 4.83e-264 823.0
BYD1_k127_7855608_20 ribonuclease K01167 - 3.1.27.3 0.0000000000000000000000000000000000004239 142.0
BYD1_k127_7855608_21 Putative regulatory protein - - - 0.000000000000000000000000000000000007251 137.0
BYD1_k127_7855608_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 8.199e-232 724.0
BYD1_k127_7855608_4 type II secretion system protein K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 614.0
BYD1_k127_7855608_5 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 558.0
BYD1_k127_7855608_6 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005381 487.0
BYD1_k127_7855608_7 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000913 418.0
BYD1_k127_7855608_8 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 331.0
BYD1_k127_7855608_9 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 311.0
BYD1_k127_7923842_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 6.393e-242 757.0
BYD1_k127_7923842_1 Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane K07791,K07792 - - 3.129e-230 718.0
BYD1_k127_7923842_10 Helix-turn-helix domain - - - 0.0000000000001915 70.0
BYD1_k127_7923842_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 475.0
BYD1_k127_7923842_3 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005174 424.0
BYD1_k127_7923842_4 PFAM UbiA prenyltransferase K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 351.0
BYD1_k127_7923842_5 threonine efflux protein K11250 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004372 289.0
BYD1_k127_7923842_6 ABC-type phosphate phosphonate transport system periplasmic component K02044 - - 0.000000000000000000000000000000000000000000000000002304 191.0
BYD1_k127_7923842_7 PFAM Phage derived protein Gp49-like (DUF891) - - - 0.00000000000000000000000000000000000000000000000002953 180.0
BYD1_k127_7923842_8 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000004317 158.0
BYD1_k127_7923842_9 - - - - 0.000000000000000000000000000001605 124.0
BYD1_k127_7945663_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1100.0
BYD1_k127_7945663_1 Protein of unknown function - - - 0.0 1063.0
BYD1_k127_7945663_10 methyl-accepting chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 469.0
BYD1_k127_7945663_11 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006034 442.0
BYD1_k127_7945663_12 His Kinase A (phosphoacceptor) domain K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 436.0
BYD1_k127_7945663_13 Long-chain fatty acid transport protein K06076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004734 413.0
BYD1_k127_7945663_14 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 393.0
BYD1_k127_7945663_15 Belongs to the TrpC family K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 377.0
BYD1_k127_7945663_16 Region found in RelA / SpoT proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 370.0
BYD1_k127_7945663_17 Transcriptional regulatory protein, C terminal K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 338.0
BYD1_k127_7945663_18 anthranilate K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 341.0
BYD1_k127_7945663_19 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006664 325.0
BYD1_k127_7945663_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 1.136e-242 757.0
BYD1_k127_7945663_20 HNH nucleases K07451 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008959 297.0
BYD1_k127_7945663_21 sensor diguanylate cyclase phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 310.0
BYD1_k127_7945663_22 Resolvase, N terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001745 281.0
BYD1_k127_7945663_23 Putative restriction endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002864 280.0
BYD1_k127_7945663_24 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001942 273.0
BYD1_k127_7945663_25 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000000000000000000006494 254.0
BYD1_k127_7945663_26 Gram-negative porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003838 256.0
BYD1_k127_7945663_27 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001713 246.0
BYD1_k127_7945663_29 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000000001587 222.0
BYD1_k127_7945663_3 modulator of DNA gyrase K03568 - - 4.863e-239 746.0
BYD1_k127_7945663_30 - - - - 0.000000000000000000000000000000000000000000000000000000000217 212.0
BYD1_k127_7945663_31 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000000219 206.0
BYD1_k127_7945663_32 PFAM ApaG domain protein K06195 - - 0.0000000000000000000000000000000000000000000000000000000005725 203.0
BYD1_k127_7945663_33 Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000000000000004168 182.0
BYD1_k127_7945663_34 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000000001669 168.0
BYD1_k127_7945663_35 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000000004 147.0
BYD1_k127_7945663_36 Bacterial Ig-like domain 2 - - - 0.0000000000000000000000000221 118.0
BYD1_k127_7945663_37 PFAM helix-turn-helix domain protein - - - 0.0000000000000000000005427 98.0
BYD1_k127_7945663_38 to nucleic acid-binding protein contains PIN domain - - - 0.000000000000000000006794 100.0
BYD1_k127_7945663_39 Cellulase (glycosyl hydrolase family 5) K01179 - 3.2.1.4 0.0000000000000000006447 96.0
BYD1_k127_7945663_4 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003812 577.0
BYD1_k127_7945663_40 - - - - 0.000000000000000006135 96.0
BYD1_k127_7945663_41 - - - - 0.00000000000000003698 91.0
BYD1_k127_7945663_42 - - - - 0.00000000001136 76.0
BYD1_k127_7945663_43 Transcriptional regulator K07733 - - 0.00000000002352 66.0
BYD1_k127_7945663_44 - - - - 0.0000008943 55.0
BYD1_k127_7945663_45 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.000001335 53.0
BYD1_k127_7945663_5 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 565.0
BYD1_k127_7945663_6 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000924 556.0
BYD1_k127_7945663_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007875 532.0
BYD1_k127_7945663_8 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 482.0
BYD1_k127_7945663_9 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 469.0
BYD1_k127_8112035_0 pyruvate phosphate dikinase K01006,K01007 - 2.7.9.1,2.7.9.2 0.0 1543.0
BYD1_k127_8112035_1 GMP synthase C terminal domain K01951 - 6.3.5.2 5.086e-305 939.0
BYD1_k127_8112035_10 DNA polymerase III K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000001077 274.0
BYD1_k127_8112035_11 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000003835 257.0
BYD1_k127_8112035_12 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000009603 274.0
BYD1_k127_8112035_13 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000001279 214.0
BYD1_k127_8112035_14 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000000128 209.0
BYD1_k127_8112035_15 pilus assembly protein PilZ K02676 - - 0.000000000000000000000000000000000000000000000002528 176.0
BYD1_k127_8112035_16 ankyrin repeat K06867 - - 0.0000000000000000000000000000000006554 141.0
BYD1_k127_8112035_2 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 4.229e-285 899.0
BYD1_k127_8112035_3 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 4.001e-256 795.0
BYD1_k127_8112035_4 Catalyzes the formation of 2-oxoglutarate from isocitrate K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 543.0
BYD1_k127_8112035_5 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 417.0
BYD1_k127_8112035_6 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 353.0
BYD1_k127_8112035_7 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 337.0
BYD1_k127_8112035_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 283.0
BYD1_k127_8112035_9 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004079 280.0
BYD1_k127_8170655_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1557.0
BYD1_k127_8170655_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1555.0
BYD1_k127_8170655_10 Transporter associated domain K03699 - - 2.094e-202 637.0
BYD1_k127_8170655_11 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008187 601.0
BYD1_k127_8170655_12 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 548.0
BYD1_k127_8170655_13 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 526.0
BYD1_k127_8170655_14 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 496.0
BYD1_k127_8170655_15 Sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 493.0
BYD1_k127_8170655_16 Histidine kinase K20975 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004574 480.0
BYD1_k127_8170655_17 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 457.0
BYD1_k127_8170655_18 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 423.0
BYD1_k127_8170655_19 Protein of unknown function (DUF475) K09799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000212 419.0
BYD1_k127_8170655_2 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.0 1145.0
BYD1_k127_8170655_20 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 413.0
BYD1_k127_8170655_21 PFAM sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 403.0
BYD1_k127_8170655_22 Ion channel K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004412 392.0
BYD1_k127_8170655_23 LysR substrate binding domain K03717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 387.0
BYD1_k127_8170655_24 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009634 394.0
BYD1_k127_8170655_25 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006304 369.0
BYD1_k127_8170655_26 Diguanylate cyclase, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 375.0
BYD1_k127_8170655_27 DNA ligase K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 351.0
BYD1_k127_8170655_28 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 347.0
BYD1_k127_8170655_29 Histidine kinase K20975 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 359.0
BYD1_k127_8170655_3 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.0 1107.0
BYD1_k127_8170655_30 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 340.0
BYD1_k127_8170655_31 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002497 328.0
BYD1_k127_8170655_32 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008776 320.0
BYD1_k127_8170655_33 Belongs to the peptidase S11 family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 319.0
BYD1_k127_8170655_34 Domain of unknown function (DUF4202) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 310.0
BYD1_k127_8170655_35 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 318.0
BYD1_k127_8170655_36 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 298.0
BYD1_k127_8170655_37 LUD domain K00782 - - 0.000000000000000000000000000000000000000000000000000000000000000000001477 244.0
BYD1_k127_8170655_38 Protein of unknown function (DUF3124) - - - 0.0000000000000000000000000000000000000001437 160.0
BYD1_k127_8170655_4 COG0474 Cation transport ATPase - - - 0.0 1060.0
BYD1_k127_8170655_40 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.000000000000000000000000000323 117.0
BYD1_k127_8170655_41 - - - - 0.000000000000000000000000000846 117.0
BYD1_k127_8170655_42 Protein of unknown function (DUF2892) - - - 0.0000000000000000000001391 110.0
BYD1_k127_8170655_44 - - - - 0.000000000000004356 79.0
BYD1_k127_8170655_45 - K11275 - - 0.00000001747 56.0
BYD1_k127_8170655_5 Belongs to the malic enzymes family K00029 - 1.1.1.40 0.0 1037.0
BYD1_k127_8170655_6 PFAM Glycoside hydrolase 15-related - - - 2.024e-219 692.0
BYD1_k127_8170655_7 Domain of unknown function (DUF3390) K18929 - - 1.911e-215 680.0
BYD1_k127_8170655_8 Elongator protein 3, MiaB family, Radical SAM - - - 5.096e-211 676.0
BYD1_k127_8170655_9 Putative diguanylate phosphodiesterase - - - 5.965e-209 677.0
BYD1_k127_8245091_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1474.0
BYD1_k127_8245091_1 Methane/Phenol/Toluene Hydroxylase K16157 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.25 6e-323 990.0
BYD1_k127_8245091_10 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 571.0
BYD1_k127_8245091_11 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 572.0
BYD1_k127_8245091_12 - K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 556.0
BYD1_k127_8245091_13 Methane/Phenol/Toluene Hydroxylase K16158 - 1.14.13.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005876 547.0
BYD1_k127_8245091_14 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006184 533.0
BYD1_k127_8245091_15 GAF modulated sigma54 specific transcriptional regulator, Fis family K21405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 535.0
BYD1_k127_8245091_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006363 503.0
BYD1_k127_8245091_17 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress K05916,K07006,K21832 - 1.14.12.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000992 504.0
BYD1_k127_8245091_18 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000875 490.0
BYD1_k127_8245091_19 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 484.0
BYD1_k127_8245091_2 helicase K03722 - 3.6.4.12 7.13e-272 851.0
BYD1_k127_8245091_20 thiosulfate sulfurtransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 473.0
BYD1_k127_8245091_21 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 459.0
BYD1_k127_8245091_22 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001587 445.0
BYD1_k127_8245091_23 5'-nucleotidase, C-terminal domain K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006634 454.0
BYD1_k127_8245091_24 TCP-1/cpn60 chaperonin family K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 437.0
BYD1_k127_8245091_25 Oxidoreductase FAD-binding domain K16161 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 1.14.13.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009001 423.0
BYD1_k127_8245091_26 Belongs to the protein N5-glutamine methyltransferase family K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003805 399.0
BYD1_k127_8245091_27 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 386.0
BYD1_k127_8245091_28 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006927 376.0
BYD1_k127_8245091_29 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 377.0
BYD1_k127_8245091_3 Histidine kinase - - - 1.011e-268 859.0
BYD1_k127_8245091_30 Protein of unknown function (DUF808) K09781 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 367.0
BYD1_k127_8245091_31 Class III cytochrome C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 354.0
BYD1_k127_8245091_32 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004108 344.0
BYD1_k127_8245091_33 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 341.0
BYD1_k127_8245091_34 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 305.0
BYD1_k127_8245091_35 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000308 290.0
BYD1_k127_8245091_36 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005771 287.0
BYD1_k127_8245091_37 Protein-disulfide isomerase K07396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003724 284.0
BYD1_k127_8245091_38 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000002669 255.0
BYD1_k127_8245091_39 Dihaem cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003552 255.0
BYD1_k127_8245091_4 CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons K01026 - 2.8.3.1 3.874e-264 823.0
BYD1_k127_8245091_40 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008053 255.0
BYD1_k127_8245091_41 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008442 244.0
BYD1_k127_8245091_42 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000000000006765 207.0
BYD1_k127_8245091_43 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000000000008291 219.0
BYD1_k127_8245091_44 chemotaxis, protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000001734 224.0
BYD1_k127_8245091_45 MmoB/DmpM family K16160 GO:0003674,GO:0003824,GO:0004497,GO:0005575,GO:0008150,GO:0008152,GO:0009987,GO:0015049,GO:0015050,GO:0015947,GO:0016491,GO:0016705,GO:0016709,GO:0032991,GO:0043446,GO:0044237,GO:0055114,GO:0071704,GO:1902494 - 0.000000000000000000000000000000000000000000000000000000003545 201.0
BYD1_k127_8245091_46 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000001035 219.0
BYD1_k127_8245091_47 Methane monooxygenase, hydrolase gamma chain K16159 - 1.14.13.25 0.0000000000000000000000000000000000000000000000000001047 191.0
BYD1_k127_8245091_48 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000000000000005916 166.0
BYD1_k127_8245091_49 Phasin protein - - - 0.000000000000000000000000000000000000001056 154.0
BYD1_k127_8245091_5 Cytochrome c bacterial - - - 4.803e-235 739.0
BYD1_k127_8245091_51 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.000000000000000000000000000005473 121.0
BYD1_k127_8245091_53 Propeptide PepSY amd peptidase M4 - - - 0.000000000000000000000008283 104.0
BYD1_k127_8245091_54 Protein of unknown function (DUF1161) - - - 0.000000000000000002446 87.0
BYD1_k127_8245091_55 - K16162 - - 0.00000001317 64.0
BYD1_k127_8245091_6 ferric reductase - - - 8.989e-195 615.0
BYD1_k127_8245091_7 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 615.0
BYD1_k127_8245091_8 Histidine kinase K07637 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008762 582.0
BYD1_k127_8245091_9 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 585.0
BYD1_k127_8261466_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1349.0
BYD1_k127_8261466_1 cation transport ATPase K01533 - 3.6.3.4 2.03e-322 1005.0
BYD1_k127_8261466_10 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 539.0
BYD1_k127_8261466_11 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 518.0
BYD1_k127_8261466_12 Respiratory-chain NADH dehydrogenase 51 Kd subunit K00335 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000911 518.0
BYD1_k127_8261466_13 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000706 445.0
BYD1_k127_8261466_14 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 430.0
BYD1_k127_8261466_15 His Kinase A (phospho-acceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 445.0
BYD1_k127_8261466_16 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 394.0
BYD1_k127_8261466_17 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002026 388.0
BYD1_k127_8261466_18 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 378.0
BYD1_k127_8261466_19 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 377.0
BYD1_k127_8261466_2 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 6.029e-310 968.0
BYD1_k127_8261466_20 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 368.0
BYD1_k127_8261466_21 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 340.0
BYD1_k127_8261466_22 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 329.0
BYD1_k127_8261466_23 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 307.0
BYD1_k127_8261466_24 2Fe-2S iron-sulfur cluster binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000228 240.0
BYD1_k127_8261466_25 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000000000000000000000000000000747 233.0
BYD1_k127_8261466_26 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000002133 230.0
BYD1_k127_8261466_27 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000000000000001617 219.0
BYD1_k127_8261466_28 cheY-homologous receiver domain K02485 - - 0.00000000000000000000000000000000000000000000000000000000000005219 216.0
BYD1_k127_8261466_29 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000000000001727 192.0
BYD1_k127_8261466_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.02e-269 835.0
BYD1_k127_8261466_30 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000176 193.0
BYD1_k127_8261466_31 SpoIIAA-like - - - 0.00000000000000000000000000000000000000000001747 165.0
BYD1_k127_8261466_32 FKBP-type peptidyl-prolyl cis-trans isomerase K03774 - 5.2.1.8 0.00000000000000000000000000000000000000000006127 164.0
BYD1_k127_8261466_33 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000000000000003786 138.0
BYD1_k127_8261466_34 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000008583 135.0
BYD1_k127_8261466_35 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000001191 85.0
BYD1_k127_8261466_36 cytochrome oxidase maturation protein cbb3-type - - - 0.000000000000007313 82.0
BYD1_k127_8261466_4 PFAM ATP-binding region, ATPase domain protein - - - 3.044e-223 708.0
BYD1_k127_8261466_5 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 3.305e-221 688.0
BYD1_k127_8261466_6 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 6.573e-204 642.0
BYD1_k127_8261466_7 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 7.613e-199 651.0
BYD1_k127_8261466_8 FAD binding domain K00239,K00278 - 1.3.5.1,1.3.5.4,1.4.3.16 1.825e-195 623.0
BYD1_k127_8261466_9 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003694 556.0
BYD1_k127_8267839_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1526.0
BYD1_k127_8267839_1 Domain of unknown function (DUF4118) K07646 - 2.7.13.3 0.0 1221.0
BYD1_k127_8267839_10 belongs to the aldehyde dehydrogenase family K21802 - 1.2.1.67 9.136e-214 673.0
BYD1_k127_8267839_11 histidyl-tRNA synthetase K01892 - 6.1.1.21 2.719e-210 659.0
BYD1_k127_8267839_12 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 1.714e-200 632.0
BYD1_k127_8267839_13 Signal transduction histidine kinase K11711 - 2.7.13.3 5.89e-199 639.0
BYD1_k127_8267839_14 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 4.438e-195 615.0
BYD1_k127_8267839_15 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 585.0
BYD1_k127_8267839_16 Radical SAM K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002993 584.0
BYD1_k127_8267839_17 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 581.0
BYD1_k127_8267839_18 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 578.0
BYD1_k127_8267839_19 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002574 567.0
BYD1_k127_8267839_2 TonB dependent receptor K02014 - - 0.0 1178.0
BYD1_k127_8267839_20 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 550.0
BYD1_k127_8267839_21 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 527.0
BYD1_k127_8267839_22 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 527.0
BYD1_k127_8267839_23 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 536.0
BYD1_k127_8267839_24 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 523.0
BYD1_k127_8267839_25 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 486.0
BYD1_k127_8267839_26 Belongs to the enoyl-CoA hydratase isomerase family K18383 - 4.1.2.41,4.2.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 470.0
BYD1_k127_8267839_27 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 457.0
BYD1_k127_8267839_28 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002409 451.0
BYD1_k127_8267839_29 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004949 449.0
BYD1_k127_8267839_3 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system K01547 - 3.6.3.12 0.0 1054.0
BYD1_k127_8267839_30 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 430.0
BYD1_k127_8267839_31 DnaJ molecular chaperone homology domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 429.0
BYD1_k127_8267839_32 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009998 423.0
BYD1_k127_8267839_33 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002474 397.0
BYD1_k127_8267839_34 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component K11689 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 382.0
BYD1_k127_8267839_35 chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005825 396.0
BYD1_k127_8267839_36 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005792 366.0
BYD1_k127_8267839_37 Domain of unknown function (DUF2437) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 340.0
BYD1_k127_8267839_38 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 306.0
BYD1_k127_8267839_39 GGDEF domain K20961 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 306.0
BYD1_k127_8267839_4 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane K01546 GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030312,GO:0030955,GO:0031004,GO:0031224,GO:0031226,GO:0031420,GO:0032991,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090533,GO:0090662,GO:0098533,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.12 3.225e-260 814.0
BYD1_k127_8267839_40 DSBA Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 290.0
BYD1_k127_8267839_41 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 291.0
BYD1_k127_8267839_42 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002701 306.0
BYD1_k127_8267839_43 response regulator K11712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003965 266.0
BYD1_k127_8267839_44 Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex K01548 - 3.6.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000001285 263.0
BYD1_k127_8267839_45 TilS substrate binding domain K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000009458 268.0
BYD1_k127_8267839_46 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000000000002371 251.0
BYD1_k127_8267839_47 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009326 243.0
BYD1_k127_8267839_48 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000000000006146 242.0
BYD1_k127_8267839_5 Transport of potassium into the cell K03549 - - 2.329e-246 775.0
BYD1_k127_8267839_50 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000001942 224.0
BYD1_k127_8267839_51 type 4 pilus biogenesis protein K02656 - - 0.00000000000000000000000000000000000000000000000000000000000000003436 237.0
BYD1_k127_8267839_52 ferrous iron binding K06990,K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000006541 229.0
BYD1_k127_8267839_53 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.000000000000000000000000000000000000000006743 168.0
BYD1_k127_8267839_54 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.00000000000000000000000000000000000000006092 151.0
BYD1_k127_8267839_55 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000001084 161.0
BYD1_k127_8267839_56 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000001562 159.0
BYD1_k127_8267839_57 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000003801 147.0
BYD1_k127_8267839_58 ABC-type phosphate transport system, periplasmic component - - - 0.000000000000000000000000000000000005044 144.0
BYD1_k127_8267839_59 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000000000000000005375 147.0
BYD1_k127_8267839_6 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 8.047e-236 733.0
BYD1_k127_8267839_60 Anaerobic sulfatase maturase K06871 - - 0.000000000000000000000000000000000007167 151.0
BYD1_k127_8267839_61 Dienelactone hydrolase - - - 0.00000000000000000000000000000000001349 143.0
BYD1_k127_8267839_62 - - - - 0.000000000000000000000000000001056 141.0
BYD1_k127_8267839_64 protein conserved in bacteria K09937 - - 0.0000000000000000016 86.0
BYD1_k127_8267839_65 - - - - 0.000000000000000569 88.0
BYD1_k127_8267839_66 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.0000000000008603 70.0
BYD1_k127_8267839_67 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000002919 64.0
BYD1_k127_8267839_68 Chemoreceptor zinc-binding domain - - - 0.00000000282 67.0
BYD1_k127_8267839_7 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 4.023e-225 717.0
BYD1_k127_8267839_8 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 3.243e-219 692.0
BYD1_k127_8267839_9 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 1.006e-215 712.0
BYD1_k127_8409996_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1324.0
BYD1_k127_8409996_1 AcrB/AcrD/AcrF family - - - 0.0 1311.0
BYD1_k127_8409996_10 exporter - - - 1.587e-235 754.0
BYD1_k127_8409996_100 membrane - - - 0.000000000000000000000000000000000000001954 154.0
BYD1_k127_8409996_101 HPP family K07168 - - 0.000000000000000000000000000000000000004085 158.0
BYD1_k127_8409996_102 rhodanese-related sulfurtransferase - - - 0.00000000000000000000000000000000000001638 146.0
BYD1_k127_8409996_103 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000000000000001642 143.0
BYD1_k127_8409996_104 Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine K00797 - 2.5.1.16 0.0000000000000000000000000000000000007185 156.0
BYD1_k127_8409996_105 Helix-turn-helix XRE-family like proteins K21498 - - 0.00000000000000000000000000000000001428 138.0
BYD1_k127_8409996_106 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000002143 140.0
BYD1_k127_8409996_107 - - - - 0.00000000000000000000000000000000002473 144.0
BYD1_k127_8409996_108 - - - - 0.0000000000000000000000000000000002359 134.0
BYD1_k127_8409996_109 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000002549 139.0
BYD1_k127_8409996_11 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 8.339e-228 715.0
BYD1_k127_8409996_110 EF hand - - - 0.00000000000000000000000000003689 121.0
BYD1_k127_8409996_111 Phosphopantetheine attachment site K02078 - - 0.0000000000000000000000000002217 119.0
BYD1_k127_8409996_112 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000001513 117.0
BYD1_k127_8409996_113 Domain of Unknown Function (DUF350) - - - 0.000000000000000000000000002058 115.0
BYD1_k127_8409996_115 FabA-like domain - - - 0.000000000000000000001608 96.0
BYD1_k127_8409996_116 Phosphopantetheine attachment site K02078 - - 0.0000000000000000001944 90.0
BYD1_k127_8409996_117 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000007891 80.0
BYD1_k127_8409996_118 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000003562 80.0
BYD1_k127_8409996_119 Phosphopantetheine attachment site K02078 - - 0.00000000000001348 77.0
BYD1_k127_8409996_12 Ammonium Transporter Family K03320,K06580 - - 2.586e-224 701.0
BYD1_k127_8409996_120 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000000000000287 75.0
BYD1_k127_8409996_121 ATP synthase I chain K02116 - - 0.000000000003411 72.0
BYD1_k127_8409996_122 - - - - 0.000000000004355 72.0
BYD1_k127_8409996_123 Uncharacterized protein domain (DUF2202) - - - 0.0000000002648 72.0
BYD1_k127_8409996_124 - - - - 0.000000001611 61.0
BYD1_k127_8409996_125 - - - - 0.00000001932 61.0
BYD1_k127_8409996_126 Double zinc ribbon - - - 0.0000007793 59.0
BYD1_k127_8409996_127 - - - - 0.000001478 60.0
BYD1_k127_8409996_129 Alpha/beta hydrolase family - - - 0.000002066 54.0
BYD1_k127_8409996_13 Mur ligase family, catalytic domain K02558 - 6.3.2.45 4.339e-217 680.0
BYD1_k127_8409996_130 Protein of unknown function (DUF642) - - - 0.0001084 54.0
BYD1_k127_8409996_14 Tryptophan halogenase - - - 1.58e-216 682.0
BYD1_k127_8409996_15 Sodium/hydrogen exchanger family - - - 5.39e-213 678.0
BYD1_k127_8409996_16 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 6.111e-212 671.0
BYD1_k127_8409996_17 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 2.945e-203 642.0
BYD1_k127_8409996_18 4Fe-4S single cluster domain - - - 2.732e-196 618.0
BYD1_k127_8409996_19 amino acid K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 600.0
BYD1_k127_8409996_2 Heavy-metal-associated domain K17686 - 3.6.3.54 0.0 1116.0
BYD1_k127_8409996_20 PFAM Peptidase M18, aminopeptidase I K01267 - 3.4.11.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 605.0
BYD1_k127_8409996_21 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005411 604.0
BYD1_k127_8409996_22 Domain of unknown function (DUF4178) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 604.0
BYD1_k127_8409996_23 ATPase (AAA superfamily K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 591.0
BYD1_k127_8409996_24 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005153 582.0
BYD1_k127_8409996_25 Beta-ketoacyl synthase, N-terminal domain K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003227 571.0
BYD1_k127_8409996_26 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660,K14667 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 561.0
BYD1_k127_8409996_27 Short C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 558.0
BYD1_k127_8409996_28 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 551.0
BYD1_k127_8409996_29 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 538.0
BYD1_k127_8409996_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 2.336e-317 981.0
BYD1_k127_8409996_30 Beta-ketoacyl synthase, C-terminal domain K09458 - 2.3.1.179 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 517.0
BYD1_k127_8409996_31 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 513.0
BYD1_k127_8409996_32 epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 499.0
BYD1_k127_8409996_33 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 485.0
BYD1_k127_8409996_34 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 499.0
BYD1_k127_8409996_35 COG0524 Sugar kinases, ribokinase family K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000839 475.0
BYD1_k127_8409996_36 Protein of unknown function (DUF1615) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002842 472.0
BYD1_k127_8409996_37 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004523 461.0
BYD1_k127_8409996_38 Membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 459.0
BYD1_k127_8409996_39 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 459.0
BYD1_k127_8409996_4 TonB dependent receptor K02014 - - 2.858e-295 925.0
BYD1_k127_8409996_40 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 446.0
BYD1_k127_8409996_41 COG1538 Outer membrane protein K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005422 448.0
BYD1_k127_8409996_42 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000799 444.0
BYD1_k127_8409996_43 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009093 424.0
BYD1_k127_8409996_44 Bacterial lipid A biosynthesis acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008987 418.0
BYD1_k127_8409996_45 RNA polymerase sigma K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009783 402.0
BYD1_k127_8409996_46 Glycosyltransferase like family 2 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 410.0
BYD1_k127_8409996_47 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 398.0
BYD1_k127_8409996_48 depolymerase K05973 - 3.1.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 400.0
BYD1_k127_8409996_49 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 387.0
BYD1_k127_8409996_5 B12 binding domain - - - 1.643e-294 910.0
BYD1_k127_8409996_50 Transcriptional regulator K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 392.0
BYD1_k127_8409996_51 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002935 382.0
BYD1_k127_8409996_52 ATPase (AAA K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 378.0
BYD1_k127_8409996_53 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001396 373.0
BYD1_k127_8409996_54 MltA-interacting protein MipA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 372.0
BYD1_k127_8409996_55 ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 352.0
BYD1_k127_8409996_56 NAD dependent epimerase/dehydratase family K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 348.0
BYD1_k127_8409996_57 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008775 352.0
BYD1_k127_8409996_58 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006434 346.0
BYD1_k127_8409996_59 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009609 341.0
BYD1_k127_8409996_6 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 5.612e-292 908.0
BYD1_k127_8409996_60 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 334.0
BYD1_k127_8409996_61 phospholipase K01058 - 3.1.1.32,3.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 341.0
BYD1_k127_8409996_62 chemotaxis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002298 357.0
BYD1_k127_8409996_63 pteridine-dependent deoxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 340.0
BYD1_k127_8409996_64 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009131 337.0
BYD1_k127_8409996_65 Uncharacterised protein, DegV family COG1307 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000484 332.0
BYD1_k127_8409996_66 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 336.0
BYD1_k127_8409996_67 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 308.0
BYD1_k127_8409996_68 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 301.0
BYD1_k127_8409996_69 NosL - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006854 284.0
BYD1_k127_8409996_7 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 3.833e-284 880.0
BYD1_k127_8409996_70 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001124 276.0
BYD1_k127_8409996_71 polysaccharide deacetylase K01452 - 3.5.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008364 301.0
BYD1_k127_8409996_72 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003883 280.0
BYD1_k127_8409996_73 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002238 281.0
BYD1_k127_8409996_74 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000343 267.0
BYD1_k127_8409996_75 LRV protein FeS4 cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004234 263.0
BYD1_k127_8409996_76 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003565 258.0
BYD1_k127_8409996_77 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000004777 235.0
BYD1_k127_8409996_78 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000007549 232.0
BYD1_k127_8409996_79 lipoprotein involved in nitrous oxide reduction - - - 0.000000000000000000000000000000000000000000000000000000000000007711 224.0
BYD1_k127_8409996_8 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 2.276e-278 867.0
BYD1_k127_8409996_80 response regulator K11618 - - 0.000000000000000000000000000000000000000000000000000000000000008521 227.0
BYD1_k127_8409996_81 Cytochrome C biogenesis protein transmembrane region - - - 0.00000000000000000000000000000000000000000000000000000000000002301 222.0
BYD1_k127_8409996_82 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000002335 218.0
BYD1_k127_8409996_83 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000000000000001283 212.0
BYD1_k127_8409996_84 - - - - 0.000000000000000000000000000000000000000000000000000000000002444 215.0
BYD1_k127_8409996_85 acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000002893 223.0
BYD1_k127_8409996_86 Domain of unknown function (DUF4262) - - - 0.000000000000000000000000000000000000000000000000000000000008139 210.0
BYD1_k127_8409996_87 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000000000000000000000000000000009548 213.0
BYD1_k127_8409996_88 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.00000000000000000000000000000000000000000000000000000003554 200.0
BYD1_k127_8409996_89 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000006677 199.0
BYD1_k127_8409996_9 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 3.831e-261 810.0
BYD1_k127_8409996_90 - - - - 0.00000000000000000000000000000000000000000000000000000256 199.0
BYD1_k127_8409996_91 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000006055 196.0
BYD1_k127_8409996_92 Bacterial transcriptional repressor C-terminal K09017 - - 0.00000000000000000000000000000000000000000000000000002762 195.0
BYD1_k127_8409996_93 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000006034 193.0
BYD1_k127_8409996_94 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000002625 183.0
BYD1_k127_8409996_95 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000000000003218 175.0
BYD1_k127_8409996_96 dehydratase - - - 0.0000000000000000000000000000000000000000000003351 183.0
BYD1_k127_8409996_97 - - - - 0.00000000000000000000000000000000000000000002354 168.0
BYD1_k127_8409996_98 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000000000000000000002446 176.0
BYD1_k127_8409996_99 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000000001457 151.0
BYD1_k127_8566064_0 Sulfate transporter antisigma-factor antagonist STAS - - - 0.0 1011.0
BYD1_k127_8566064_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 5.051e-294 910.0
BYD1_k127_8566064_10 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 3.94e-198 621.0
BYD1_k127_8566064_11 UDP-N-acetylglucosamine 2-epimerase K01791 - 5.1.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 593.0
BYD1_k127_8566064_12 Major facilitator Superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 583.0
BYD1_k127_8566064_13 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 549.0
BYD1_k127_8566064_14 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000634 559.0
BYD1_k127_8566064_15 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 529.0
BYD1_k127_8566064_16 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 493.0
BYD1_k127_8566064_17 NAD(P)H-binding K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 491.0
BYD1_k127_8566064_18 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008999 492.0
BYD1_k127_8566064_19 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 466.0
BYD1_k127_8566064_2 Proton-conducting membrane transporter - - - 2.051e-285 890.0
BYD1_k127_8566064_20 TIGRFAM chain length determinant protein EpsF - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000813 477.0
BYD1_k127_8566064_21 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 466.0
BYD1_k127_8566064_22 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 461.0
BYD1_k127_8566064_23 Belongs to the glycosyl hydrolase 5 (cellulase A) family K19355 - 3.2.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008787 435.0
BYD1_k127_8566064_24 Glycosyl transferase WecB/TagA/CpsF family K05946,K13660 - 2.4.1.187 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 415.0
BYD1_k127_8566064_25 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 405.0
BYD1_k127_8566064_26 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 361.0
BYD1_k127_8566064_27 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 334.0
BYD1_k127_8566064_28 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 330.0
BYD1_k127_8566064_29 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 317.0
BYD1_k127_8566064_3 Sulfate transporter antisigma-factor antagonist STAS - - - 8.789e-280 876.0
BYD1_k127_8566064_30 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003601 300.0
BYD1_k127_8566064_31 Conserved hypothetical ATP binding protein K06945 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005902 287.0
BYD1_k127_8566064_32 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 285.0
BYD1_k127_8566064_33 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000759 292.0
BYD1_k127_8566064_34 AAA domain K08252,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005189 284.0
BYD1_k127_8566064_35 Chemotaxis sensory transducer K03776 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008298 272.0
BYD1_k127_8566064_36 pathogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003702 276.0
BYD1_k127_8566064_37 TIGRFAM peptidyl-prolyl cis-trans isomerase, EpsD family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006683 258.0
BYD1_k127_8566064_38 Domain of unknown function (DUF4962) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001152 267.0
BYD1_k127_8566064_39 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000003249 232.0
BYD1_k127_8566064_4 TonB-dependent Receptor Plug Domain K02014 - - 7.02e-262 826.0
BYD1_k127_8566064_40 DUF218 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003601 234.0
BYD1_k127_8566064_41 Glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000002415 229.0
BYD1_k127_8566064_42 COG1541 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000002931 233.0
BYD1_k127_8566064_43 TIGRFAM exopolysaccharide biosynthesis operon protein EpsL - - - 0.0000000000000000000000000000000000000000000000000000000002122 225.0
BYD1_k127_8566064_45 Roadblock/LC7 domain K07131 - - 0.00000000000000000000000000000000000000000000000000000000109 203.0
BYD1_k127_8566064_46 - - - - 0.000000000000000000000000000000000000000000000000000000003315 221.0
BYD1_k127_8566064_47 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000006714 211.0
BYD1_k127_8566064_48 - - - - 0.00000000000000000000000000000000000000000000000000000001093 205.0
BYD1_k127_8566064_49 - - - - 0.00000000000000000000000000000000000000000000000000000001102 213.0
BYD1_k127_8566064_5 RecG wedge domain K03655 - 3.6.4.12 3.824e-254 802.0
BYD1_k127_8566064_50 - - - - 0.00000000000000000000000000000000000000000000000000000009327 205.0
BYD1_k127_8566064_51 lipopolysaccharide transmembrane transporter activity K07058 - - 0.0000000000000000000000000000000000000000000000000000006582 203.0
BYD1_k127_8566064_52 membrane - - - 0.00000000000000000000000000000000000000000000000000006315 189.0
BYD1_k127_8566064_53 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000003045 188.0
BYD1_k127_8566064_54 O-Antigen ligase - - - 0.000000000000000000000000000000000000000000000000003344 200.0
BYD1_k127_8566064_55 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000000979 194.0
BYD1_k127_8566064_56 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000005549 192.0
BYD1_k127_8566064_58 Protein of unknown function (DUF3485) - - - 0.0000000000000000000000000000000000000000000000002311 184.0
BYD1_k127_8566064_59 HNH nucleases - - - 0.0000000000000000000000000000000000000000000000005628 191.0
BYD1_k127_8566064_6 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 7.963e-238 764.0
BYD1_k127_8566064_60 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000000000002802 183.0
BYD1_k127_8566064_61 TIGRFAM transcriptional regulator EpsA - - - 0.00000000000000000000000000000000000000000000001166 186.0
BYD1_k127_8566064_62 PEP-CTERM motif - - - 0.000000000000000000000000000000000000000000003314 171.0
BYD1_k127_8566064_63 - - - - 0.000000000000000000000000000000000000000001694 165.0
BYD1_k127_8566064_64 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000005414 176.0
BYD1_k127_8566064_65 Protoglobin - - - 0.00000000000000000000000000000000000000002349 159.0
BYD1_k127_8566064_66 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000004047 158.0
BYD1_k127_8566064_67 Hexapeptide repeat of succinyl-transferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000004116 156.0
BYD1_k127_8566064_68 RTX toxins and related Ca2 binding proteins - - - 0.0000000000000000000000000000000000000002593 158.0
BYD1_k127_8566064_7 Sigma-54 interaction domain - - - 2.971e-234 731.0
BYD1_k127_8566064_70 COG2346, Truncated hemoglobins - - - 0.00000000000000000000000000000000003927 142.0
BYD1_k127_8566064_71 Psort location Cytoplasmic, score 8.96 - - - 0.0000000000000000000000000000000005416 141.0
BYD1_k127_8566064_72 biosynthesis protein K03328 - - 0.000000000000000000000000000003478 134.0
BYD1_k127_8566064_73 - - - - 0.000000000000000000000003315 109.0
BYD1_k127_8566064_74 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000000000000000000005188 112.0
BYD1_k127_8566064_75 VanZ like family - - - 0.000000000000000734 82.0
BYD1_k127_8566064_76 Polymer-forming cytoskeletal - - - 0.000000000000001219 89.0
BYD1_k127_8566064_77 Sporulation related domain - - - 0.00000000000003868 82.0
BYD1_k127_8566064_78 Protein of unknown function (DUF2802) - - - 0.0000001227 62.0
BYD1_k127_8566064_79 Belongs to the glycosyl hydrolase 26 family K01218 - 3.2.1.78 0.0004499 51.0
BYD1_k127_8566064_8 Proton-conducting membrane transporter - - - 8.77e-233 732.0
BYD1_k127_8566064_80 universal stress protein - - - 0.0004983 49.0
BYD1_k127_8566064_9 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 1.105e-207 666.0
BYD1_k127_8595203_0 Dynamin family - - - 5.375e-195 627.0
BYD1_k127_8595203_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 597.0
BYD1_k127_8595203_10 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 366.0
BYD1_k127_8595203_11 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 313.0
BYD1_k127_8595203_12 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 301.0
BYD1_k127_8595203_13 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005736 288.0
BYD1_k127_8595203_14 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008164 260.0
BYD1_k127_8595203_15 Belongs to the thioredoxin family K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000004915 174.0
BYD1_k127_8595203_16 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.00000000000000000001009 98.0
BYD1_k127_8595203_17 Ferredoxin - - - 0.0000000000000000001233 88.0
BYD1_k127_8595203_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007366 586.0
BYD1_k127_8595203_3 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006133 525.0
BYD1_k127_8595203_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 518.0
BYD1_k127_8595203_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 527.0
BYD1_k127_8595203_6 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000615 446.0
BYD1_k127_8595203_7 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 422.0
BYD1_k127_8595203_8 Endonuclease Exonuclease phosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 402.0
BYD1_k127_8595203_9 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006555 390.0
BYD1_k127_8755754_0 Heat shock 70 kDa protein K04043 - - 0.0 1100.0
BYD1_k127_8755754_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 8.713e-229 715.0
BYD1_k127_8755754_10 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003885 492.0
BYD1_k127_8755754_11 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 465.0
BYD1_k127_8755754_12 May be involved in the transport of PQQ or its precursor to the periplasm - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 455.0
BYD1_k127_8755754_13 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002681 432.0
BYD1_k127_8755754_14 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007204 420.0
BYD1_k127_8755754_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 435.0
BYD1_k127_8755754_16 Carbamoyl-phosphate synthetase large chain, oligomerisation domain K01955 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 371.0
BYD1_k127_8755754_17 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 355.0
BYD1_k127_8755754_18 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 355.0
BYD1_k127_8755754_19 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 351.0
BYD1_k127_8755754_2 peptidase - - - 5.334e-209 664.0
BYD1_k127_8755754_20 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 336.0
BYD1_k127_8755754_21 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000004152 269.0
BYD1_k127_8755754_22 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002495 271.0
BYD1_k127_8755754_23 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000004674 248.0
BYD1_k127_8755754_24 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000003723 244.0
BYD1_k127_8755754_25 Thioredoxin-like domain K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000006638 225.0
BYD1_k127_8755754_26 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000003319 217.0
BYD1_k127_8755754_27 Thioesterase domain K02170 - 3.1.1.85 0.00000000000000000000000000000000000000000006201 181.0
BYD1_k127_8755754_28 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000000000000002129 137.0
BYD1_k127_8755754_29 - - - - 0.000000000000000000000000000000005962 134.0
BYD1_k127_8755754_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 2.288e-202 634.0
BYD1_k127_8755754_30 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000002602 65.0
BYD1_k127_8755754_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 1.429e-200 632.0
BYD1_k127_8755754_5 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 595.0
BYD1_k127_8755754_6 Methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 594.0
BYD1_k127_8755754_7 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 589.0
BYD1_k127_8755754_8 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002798 556.0
BYD1_k127_8755754_9 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 520.0
BYD1_k127_8846891_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.887e-297 921.0
BYD1_k127_8846891_1 cofactor biosynthesis protein NifB K02585 - - 2.783e-208 654.0
BYD1_k127_8846891_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 346.0
BYD1_k127_8846891_3 hydratase decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005659 291.0
BYD1_k127_8846891_4 transcriptional K03719 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003277 261.0
BYD1_k127_9224038_0 TonB dependent receptor K02014 - - 1.025e-313 978.0
BYD1_k127_9224038_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 1.774e-207 668.0
BYD1_k127_9224038_10 Histidine kinase K20974 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 462.0
BYD1_k127_9224038_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003742 434.0
BYD1_k127_9224038_12 Binding-protein-dependent transport system inner membrane component K02054,K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 397.0
BYD1_k127_9224038_13 PFAM Rhomboid family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006925 401.0
BYD1_k127_9224038_14 Outer membrane protein beta-barrel family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007257 391.0
BYD1_k127_9224038_15 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 357.0
BYD1_k127_9224038_16 lytic transglycosylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 349.0
BYD1_k127_9224038_17 Binding-protein-dependent transport system inner membrane component K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 348.0
BYD1_k127_9224038_18 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 325.0
BYD1_k127_9224038_19 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001157 292.0
BYD1_k127_9224038_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 611.0
BYD1_k127_9224038_20 methionine synthase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000002025 245.0
BYD1_k127_9224038_21 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001176 229.0
BYD1_k127_9224038_22 Toxic component of a toxin-antitoxin (TA) module. An RNase K07062 - - 0.0000000000000000000000000000000000000000000000000000000000000001138 224.0
BYD1_k127_9224038_23 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000002246 226.0
BYD1_k127_9224038_24 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000002802 232.0
BYD1_k127_9224038_25 Biopolymer transport protein K03559 - - 0.000000000000000000000000000000000000000000000000003735 191.0
BYD1_k127_9224038_26 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000000000287 159.0
BYD1_k127_9224038_27 Plasmid stability protein K21495 - - 0.000000000000000000000000000000000001086 139.0
BYD1_k127_9224038_28 response to cobalt ion - - - 0.000000000000000000000000000000000009511 143.0
BYD1_k127_9224038_29 - - - - 0.0000000000000000001096 93.0
BYD1_k127_9224038_3 Peptidase U32 K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 586.0
BYD1_k127_9224038_31 - - - - 0.00000000000002961 74.0
BYD1_k127_9224038_32 Peptidase family U32 - - - 0.0000000001709 61.0
BYD1_k127_9224038_4 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 569.0
BYD1_k127_9224038_5 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006893 546.0
BYD1_k127_9224038_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 545.0
BYD1_k127_9224038_7 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002568 504.0
BYD1_k127_9224038_8 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 489.0
BYD1_k127_9224038_9 BadF/BadG/BcrA/BcrD ATPase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004099 469.0
BYD1_k127_9299869_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1636.0
BYD1_k127_9299869_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 583.0
BYD1_k127_9299869_10 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000105 171.0
BYD1_k127_9299869_11 FRG - - - 0.00000000000000000000000000000001767 136.0
BYD1_k127_9299869_12 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000000019 132.0
BYD1_k127_9299869_13 NTF2 fold immunity protein - - - 0.000000006506 64.0
BYD1_k127_9299869_14 TIGRFAM TonB family protein K03832 - - 0.00000008388 60.0
BYD1_k127_9299869_2 FMN binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 489.0
BYD1_k127_9299869_3 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 398.0
BYD1_k127_9299869_4 Molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005131 284.0
BYD1_k127_9299869_5 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001397 265.0
BYD1_k127_9299869_6 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000001307 207.0
BYD1_k127_9299869_7 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000001229 185.0
BYD1_k127_9299869_8 - - - - 0.0000000000000000000000000000000000000000000000001929 194.0
BYD1_k127_9299869_9 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000000338 167.0
BYD1_k127_9349878_0 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004513 536.0
BYD1_k127_9349878_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 504.0
BYD1_k127_9349878_10 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000006043 119.0
BYD1_k127_9349878_11 alpha-ribazole phosphatase K02226 - 3.1.3.73 0.000000000000000000000005536 116.0
BYD1_k127_9349878_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 460.0
BYD1_k127_9349878_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008913 430.0
BYD1_k127_9349878_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 404.0
BYD1_k127_9349878_5 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005221 365.0
BYD1_k127_9349878_6 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008493 280.0
BYD1_k127_9349878_7 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002422 258.0
BYD1_k127_9349878_8 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000001428 234.0
BYD1_k127_9349878_9 LysE type translocator - - - 0.0000000000000000000000000000000001531 140.0
BYD1_k127_9424783_0 methionine synthase K00548 - 2.1.1.13 0.0 1930.0
BYD1_k127_9424783_1 pyridine nucleotide-disulphide oxidoreductase K17218 GO:0003674,GO:0003824,GO:0003955,GO:0005488,GO:0005515,GO:0006091,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0019646,GO:0022900,GO:0022904,GO:0042802,GO:0044237,GO:0045333,GO:0055114 1.8.5.4 4.984e-227 708.0
BYD1_k127_9424783_10 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 425.0
BYD1_k127_9424783_11 Drug resistance transporter Bcr CflA subfamily K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008413 412.0
BYD1_k127_9424783_12 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005351 379.0
BYD1_k127_9424783_13 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 375.0
BYD1_k127_9424783_14 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 350.0
BYD1_k127_9424783_15 enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 339.0
BYD1_k127_9424783_16 transcriptional - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003595 273.0
BYD1_k127_9424783_17 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000006695 265.0
BYD1_k127_9424783_18 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000001434 214.0
BYD1_k127_9424783_19 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000000001484 183.0
BYD1_k127_9424783_2 Diguanylate cyclase - - - 1.576e-220 719.0
BYD1_k127_9424783_20 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000007102 153.0
BYD1_k127_9424783_21 Belongs to the P(II) protein family K04751,K04752 - - 0.00000000000000000000000000000000003585 134.0
BYD1_k127_9424783_23 DsrE/DsrF-like family - - - 0.000000000000000000000000000004101 128.0
BYD1_k127_9424783_24 helix_turn_helix, mercury resistance K08365 - - 0.0000000000000000000002997 101.0
BYD1_k127_9424783_25 Domain of unknown function (DUF1840) - - - 0.000000000000000000002087 97.0
BYD1_k127_9424783_26 - - - - 0.0000000000000000001079 97.0
BYD1_k127_9424783_27 protein conserved in bacteria K09806 - - 0.0000000000000000009883 88.0
BYD1_k127_9424783_28 - - - - 0.00000000000001365 82.0
BYD1_k127_9424783_3 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 1.886e-218 687.0
BYD1_k127_9424783_4 Peptidase family M48 - - - 3.57e-212 675.0
BYD1_k127_9424783_5 Mg chelatase subunit ChlI K07391 - - 2.544e-201 637.0
BYD1_k127_9424783_6 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 562.0
BYD1_k127_9424783_7 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 514.0
BYD1_k127_9424783_8 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 521.0
BYD1_k127_9424783_9 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 509.0
BYD1_k127_9550369_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 9.252e-305 950.0
BYD1_k127_9550369_1 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 1.546e-247 775.0
BYD1_k127_9550369_10 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 328.0
BYD1_k127_9550369_11 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009267 281.0
BYD1_k127_9550369_12 synthesis repressor, PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003367 278.0
BYD1_k127_9550369_13 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.000000000000000000000000000000000000000000000000004468 188.0
BYD1_k127_9550369_14 - - - - 0.00000000003101 76.0
BYD1_k127_9550369_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 5.452e-222 694.0
BYD1_k127_9550369_3 glycolate oxidase subunit GlcD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 602.0
BYD1_k127_9550369_4 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 - 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008297 439.0
BYD1_k127_9550369_5 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008388 423.0
BYD1_k127_9550369_6 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023 - 1.1.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009268 417.0
BYD1_k127_9550369_7 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 370.0
BYD1_k127_9550369_8 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 359.0
BYD1_k127_9550369_9 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000934 369.0
BYD1_k127_9804224_0 Sodium:solute symporter family - - - 1.992e-319 990.0
BYD1_k127_9804224_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.328e-207 647.0
BYD1_k127_9804224_10 membrane - - - 0.000000000000000000000000000000002854 137.0
BYD1_k127_9804224_11 - - - - 0.000000000000000000000000000000006554 129.0
BYD1_k127_9804224_12 - - - - 0.0005671 49.0
BYD1_k127_9804224_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 540.0
BYD1_k127_9804224_3 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 519.0
BYD1_k127_9804224_4 COG2202 FOG PAS PAC domain K03776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 412.0
BYD1_k127_9804224_5 Thiol-activated cytolysin K11031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007045 357.0
BYD1_k127_9804224_6 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000819 271.0
BYD1_k127_9804224_7 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000004685 227.0
BYD1_k127_9804224_8 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000001444 224.0
BYD1_k127_9804224_9 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000000000000000000003579 159.0
BYD1_k127_9808361_0 ABC transporter transmembrane region K12541 - - 0.0 1029.0
BYD1_k127_9808361_1 HlyD family secretion protein K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 586.0
BYD1_k127_9808361_10 luxR family - - - 0.0000000000000000000000000000000000000000001324 166.0
BYD1_k127_9808361_11 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000001122 54.0
BYD1_k127_9808361_2 COG2931, RTX toxins and related Ca2 -binding proteins K20276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 582.0
BYD1_k127_9808361_3 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218,K17229 - 1.8.2.3,1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005998 541.0
BYD1_k127_9808361_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 523.0
BYD1_k127_9808361_5 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003507 314.0
BYD1_k127_9808361_6 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006635 279.0
BYD1_k127_9808361_7 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000003654 256.0
BYD1_k127_9808361_8 Cytochrome c-type protein K02569 - - 0.00000000000000000000000000000000000000000000000000000003048 205.0
BYD1_k127_9808361_9 Pfam cytochrome c K17230 - - 0.00000000000000000000000000000000000000000000000009273 184.0
BYD1_k127_9817190_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1259.0
BYD1_k127_9817190_1 glutaminyl-tRNA K01886 - 6.1.1.18 8.085e-315 973.0
BYD1_k127_9817190_10 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 574.0
BYD1_k127_9817190_11 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 578.0
BYD1_k127_9817190_12 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 558.0
BYD1_k127_9817190_13 Methyl-accepting chemotaxis protein (MCP) signaling domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 547.0
BYD1_k127_9817190_14 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 508.0
BYD1_k127_9817190_15 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 493.0
BYD1_k127_9817190_16 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 499.0
BYD1_k127_9817190_17 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004644 492.0
BYD1_k127_9817190_18 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003156 465.0
BYD1_k127_9817190_19 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006041 437.0
BYD1_k127_9817190_2 Transport of potassium into the cell K03549 - - 1.625e-310 964.0
BYD1_k127_9817190_20 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 457.0
BYD1_k127_9817190_21 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008532 393.0
BYD1_k127_9817190_22 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 391.0
BYD1_k127_9817190_23 Cysteine-rich domain K11473,K18928 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 369.0
BYD1_k127_9817190_24 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 361.0
BYD1_k127_9817190_25 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 345.0
BYD1_k127_9817190_26 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 327.0
BYD1_k127_9817190_27 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 311.0
BYD1_k127_9817190_28 Class II aldolase adducin family protein K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 287.0
BYD1_k127_9817190_29 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009435 279.0
BYD1_k127_9817190_3 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 1.75e-308 966.0
BYD1_k127_9817190_30 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000003749 258.0
BYD1_k127_9817190_31 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005344 251.0
BYD1_k127_9817190_32 Transcriptional regulator K05799 - - 0.00000000000000000000000000000000000000000000000000000000000000000001597 241.0
BYD1_k127_9817190_33 cheY-homologous receiver domain K03413 - - 0.00000000000000000000000000000000000000000000000000000000000006269 216.0
BYD1_k127_9817190_34 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000163 224.0
BYD1_k127_9817190_35 SMART CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000003468 215.0
BYD1_k127_9817190_36 LytTr DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000006539 210.0
BYD1_k127_9817190_37 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000008065 207.0
BYD1_k127_9817190_38 LUD domain K00782 - - 0.000000000000000000000000000000000000000000000000001107 201.0
BYD1_k127_9817190_39 PFAM regulatory protein LuxR - - - 0.00000000000000000000000000000000000000000000004684 183.0
BYD1_k127_9817190_4 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 9.152e-258 809.0
BYD1_k127_9817190_40 - - - - 0.00000000000000000000000000000000001925 148.0
BYD1_k127_9817190_41 KTSC domain - - - 0.000000000000000000000000000000388 125.0
BYD1_k127_9817190_42 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.0000000000000000000000000157 111.0
BYD1_k127_9817190_43 Protein of unknown function (DUF721) - - - 0.000000000000000004303 92.0
BYD1_k127_9817190_44 STAS domain - - - 0.00000000001584 69.0
BYD1_k127_9817190_45 - - - - 0.0000000005059 63.0
BYD1_k127_9817190_5 Belongs to the MurCDEF family K01924 - 6.3.2.8 5.444e-241 751.0
BYD1_k127_9817190_6 Diguanylate cyclase - - - 1.522e-210 681.0
BYD1_k127_9817190_7 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 1.967e-204 667.0
BYD1_k127_9817190_8 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 611.0
BYD1_k127_9817190_9 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 611.0