Overview

ID MAG00031
Name BYD1_bin.45
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Chloroflexota
Class Limnocylindria
Order Limnocylindrales
Family CSP1-4
Genus CF-46
Species CF-46 sp035759195
Assembly information
Completeness (%) 85.09
Contamination (%) 3.69
GC content (%) 72.0
N50 (bp) 6,940
Genome size (bp) 2,970,251

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2731

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10008981_0 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 310.0
BYD1_k127_10008981_1 Binding-protein-dependent transport system inner membrane component K02018,K02046 - - 0.0000000000000000000000000000000000000000000000000000000000000003356 233.0
BYD1_k127_10008981_2 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000005343 196.0
BYD1_k127_10008981_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000008009 166.0
BYD1_k127_10008981_4 Molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.0000000000000000000000000000007382 134.0
BYD1_k127_10008981_5 TOBE domain - - - 0.0000000000000000000000000268 113.0
BYD1_k127_10008981_6 Belongs to the universal stress protein A family - - - 0.000000000000000000000268 108.0
BYD1_k127_10027759_0 Binding-protein-dependent transport system inner membrane component K05846 - - 0.0000000000000000000000000000000000000000000000000000000000002014 230.0
BYD1_k127_10027759_1 Binding-protein-dependent transport system inner membrane component K05846 - - 0.00000000000000000000000000000000000000000000000000000000005182 216.0
BYD1_k127_10027759_2 Glycine betaine ABC transporter substrate-binding protein K05845 - - 0.0000000000000000000000000000000000000006666 169.0
BYD1_k127_10032465_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 544.0
BYD1_k127_10032465_1 Winged helix DNA-binding domain - - - 0.00000004045 55.0
BYD1_k127_10032465_2 Acyl-ACP thioesterase - - - 0.0000323 51.0
BYD1_k127_10035465_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0040007,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 490.0
BYD1_k127_10035465_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003518 450.0
BYD1_k127_10035465_2 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain K01945,K11788 - 6.3.3.1,6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002593 315.0
BYD1_k127_10035465_3 SAICAR synthetase K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000001902 254.0
BYD1_k127_10035465_4 PFAM metal-dependent phosphohydrolase, HD sub domain K02103,K02529 - - 0.000000000000000000000000000000000007936 151.0
BYD1_k127_10039672_0 Zn peptidase - - - 0.000000000000000000000000000000000000000000000000000000000641 219.0
BYD1_k127_10041160_0 Acetyl propionyl-CoA carboxylase alpha subunit K01968 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 460.0
BYD1_k127_10054018_1 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000002812 162.0
BYD1_k127_10063100_0 Peptidase inhibitor I9 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008942 359.0
BYD1_k127_10063100_1 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000009864 222.0
BYD1_k127_10063100_2 - - - - 0.00000000000000000000000000003184 132.0
BYD1_k127_10063100_3 phosphorelay signal transduction system - - - 0.0001041 53.0
BYD1_k127_10070660_0 ABC-type Fe3 transport system permease component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 532.0
BYD1_k127_10070660_1 import. Responsible for energy coupling to the transport system K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 381.0
BYD1_k127_10070660_2 Pyruvate phosphate dikinase, PEP K01006,K01007 - 2.7.9.1,2.7.9.2 0.000000000000000000000000000000000000000000000000000004487 195.0
BYD1_k127_10070660_3 phosphatase activity - - - 0.0000000000000000000001808 107.0
BYD1_k127_10071729_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000001598 114.0
BYD1_k127_10071729_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346,K03502 - 2.7.7.7 0.0000214 53.0
BYD1_k127_10071729_2 EamA-like transporter family - - - 0.0008481 45.0
BYD1_k127_10080382_0 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 520.0
BYD1_k127_10080382_1 Putative glutamine amidotransferase K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 451.0
BYD1_k127_10080382_2 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 394.0
BYD1_k127_10080382_3 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004995 380.0
BYD1_k127_10080382_4 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007962 348.0
BYD1_k127_10080382_5 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001481 270.0
BYD1_k127_10080382_6 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627,K00658,K09699 - 2.3.1.12,2.3.1.168,2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000001086 223.0
BYD1_k127_10080382_7 NmrA-like family - - - 0.00000000000000000000000000000000000000000000005004 183.0
BYD1_k127_10080382_8 PFAM regulatory protein, ArsR - - - 0.00000000000000000000000000000448 129.0
BYD1_k127_10092054_0 ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 608.0
BYD1_k127_10092054_1 HpcH/HpaI aldolase/citrate lyase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000001079 235.0
BYD1_k127_10092054_2 ECF sigma factor K03088 - - 0.00000000000000000000000007843 114.0
BYD1_k127_10092054_3 PFAM CBS domain containing protein - - - 0.00000000000003722 83.0
BYD1_k127_10092054_4 permease - - - 0.000000215 62.0
BYD1_k127_10106640_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000004032 268.0
BYD1_k127_10106640_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.000000000000000000000000000000000000000000000000000000000000000000000000001219 260.0
BYD1_k127_10106640_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000001319 169.0
BYD1_k127_10137158_0 CoA binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 302.0
BYD1_k127_10137158_1 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000009804 179.0
BYD1_k127_10142726_0 Threonyl alanyl tRNA synthetase SAD K01872,K07050 - 6.1.1.7 0.000000000000000000000000000000000000000000000000005581 199.0
BYD1_k127_10142726_1 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000787 187.0
BYD1_k127_1016673_0 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 309.0
BYD1_k127_1016673_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000004952 210.0
BYD1_k127_1016673_2 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000002428 147.0
BYD1_k127_1016673_3 PFAM pyridoxamine 5'-phosphate oxidase-related - - - 0.000000000000000000000000000007691 126.0
BYD1_k127_10183528_0 Aminotransferase class I and II K11358 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 411.0
BYD1_k127_10183528_1 - - - - 0.00000000000000000000000000000000000000000000000001596 195.0
BYD1_k127_10183528_2 peroxiredoxin activity K02199 - - 0.000000000000000000000000000004311 130.0
BYD1_k127_10202207_0 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 371.0
BYD1_k127_10202207_1 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003218 269.0
BYD1_k127_10202207_2 transcriptional regulator - - - 0.000000000000000000000000000000000000000000006119 172.0
BYD1_k127_10247401_0 trisaccharide binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 528.0
BYD1_k127_10247401_1 Thioredoxin reductase K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006258 447.0
BYD1_k127_10247401_2 metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008649 392.0
BYD1_k127_10247401_3 PspA/IM30 family K03969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003129 265.0
BYD1_k127_10247401_4 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001684 250.0
BYD1_k127_10247401_5 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000001137 136.0
BYD1_k127_10247401_6 - - - - 0.000000000000000000000000000832 124.0
BYD1_k127_10247401_7 rRNA (guanine-N2-)-methyltransferase activity K08316,K15257 - 2.1.1.171 0.00000000000000000741 92.0
BYD1_k127_10247401_8 - - - - 0.00000000002907 71.0
BYD1_k127_10247401_9 SnoaL-like polyketide cyclase - - - 0.00000001887 58.0
BYD1_k127_10254520_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007786 412.0
BYD1_k127_10254520_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 GO:0003674,GO:0003824,GO:0004795,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008144,GO:0016829,GO:0016835,GO:0016838,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 389.0
BYD1_k127_10254520_10 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000001135 79.0
BYD1_k127_10254520_2 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 341.0
BYD1_k127_10254520_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000004159 268.0
BYD1_k127_10254520_4 homoserine dehydrogenase K00003,K12524 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.3,2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000003837 264.0
BYD1_k127_10254520_5 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000002516 229.0
BYD1_k127_10254520_6 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000003901 234.0
BYD1_k127_10254520_7 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000005509 179.0
BYD1_k127_10254520_8 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.00000000000000000000000000003999 133.0
BYD1_k127_10254520_9 permease - - - 0.000000000000000002109 98.0
BYD1_k127_10270599_0 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0018995,GO:0019219,GO:0019222,GO:0020003,GO:0022607,GO:0030430,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0033643,GO:0033646,GO:0033655,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043226,GO:0043227,GO:0043230,GO:0043531,GO:0043656,GO:0043657,GO:0043933,GO:0044085,GO:0044183,GO:0044215,GO:0044216,GO:0044217,GO:0044421,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0065010,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 3.579e-254 797.0
BYD1_k127_10272000_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 609.0
BYD1_k127_10272000_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000004742 186.0
BYD1_k127_10272000_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0070180,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.000000000000000000000000000000004648 131.0
BYD1_k127_10272000_3 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000002314 63.0
BYD1_k127_10276327_0 Amidohydrolase family K01487 GO:0003674,GO:0003824,GO:0005488,GO:0006139,GO:0006144,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008892,GO:0009112,GO:0009987,GO:0016787,GO:0016810,GO:0016813,GO:0016814,GO:0018756,GO:0019239,GO:0034641,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0046098,GO:0046483,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072521,GO:1901360,GO:1901564 3.5.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000218 300.0
BYD1_k127_10276327_1 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000005571 201.0
BYD1_k127_10288864_0 PFAM oxidoreductase molybdopterin binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 454.0
BYD1_k127_10288864_1 PFAM ROK family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 319.0
BYD1_k127_10288864_2 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K05365 - 2.4.1.129,3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008971 306.0
BYD1_k127_10288864_3 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001607 273.0
BYD1_k127_10288864_4 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000002954 264.0
BYD1_k127_10288864_5 PFAM ROK family protein K00845 - 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000003917 237.0
BYD1_k127_10288864_6 Allophanate hydrolase subunit 2 - - - 0.000000000000000000000000000000000000000000000000000000003243 213.0
BYD1_k127_10288864_7 carbohydrate transport K02027,K17244 - - 0.00000000000000000000000000000000000000000000000003656 190.0
BYD1_k127_10288864_8 Pfam:AHS1 - - - 0.0000000000000000000000000000000000000000001361 176.0
BYD1_k127_10288864_9 Evidence 4 Homologs of previously reported genes of - - - 0.000000175 64.0
BYD1_k127_10318241_0 DEAD DEAH box K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003383 569.0
BYD1_k127_10318241_1 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 411.0
BYD1_k127_10318241_2 Peptidase family S51 K13282 - 3.4.15.6 0.000000000000000000000000000000000000000000000000000000000000000000000005981 267.0
BYD1_k127_10318241_3 Belongs to the FPG family K05522 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000002097 212.0
BYD1_k127_10318241_4 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000004515 192.0
BYD1_k127_10318241_6 Glycosyltransferase family 87 - - - 0.0001841 55.0
BYD1_k127_10318241_7 Asparagine synthase K01953 - 6.3.5.4 0.0009869 49.0
BYD1_k127_1033867_0 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 408.0
BYD1_k127_1033867_1 PFAM Acetamidase Formamidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 370.0
BYD1_k127_1033867_2 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006614 371.0
BYD1_k127_1033867_3 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004874 340.0
BYD1_k127_1033867_4 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 297.0
BYD1_k127_1033867_5 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000002457 173.0
BYD1_k127_1033867_6 Peptidase, M23 - - - 0.000000000000549 77.0
BYD1_k127_1033867_7 luxR family - - - 0.0002787 48.0
BYD1_k127_1033867_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.0008917 49.0
BYD1_k127_10339302_0 DEAD DEAH box helicase K03724 - - 1.019e-272 858.0
BYD1_k127_10339302_1 DoxX K16937 - 1.8.5.2 0.000000000000000000000000000000000000000000000000000000000000003065 227.0
BYD1_k127_10347320_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 592.0
BYD1_k127_10347320_1 PFAM ABC transporter related K06158 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008001 395.0
BYD1_k127_10347320_2 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000003054 241.0
BYD1_k127_10347320_3 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.00000000000000000000000000000000000000002033 169.0
BYD1_k127_10347320_4 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000001156 111.0
BYD1_k127_10347320_5 TadE-like protein - - - 0.0000000001758 72.0
BYD1_k127_10347320_6 SAF K02279 - - 0.000000002022 68.0
BYD1_k127_1035929_0 Evidence 5 No homology to any previously reported sequences - - - 4.899e-257 826.0
BYD1_k127_1035929_1 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000001926 210.0
BYD1_k127_1035929_2 2Fe-2S -binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000003461 180.0
BYD1_k127_10369543_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0016020,GO:0016021,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0034220,GO:0040007,GO:0044237,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 5.729e-215 690.0
BYD1_k127_10369543_1 Cytochrome C oxidase subunit II, periplasmic domain K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000000002028 156.0
BYD1_k127_10386261_0 D-isomer specific 2-hydroxyacid dehydrogenase K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 344.0
BYD1_k127_10386261_1 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841 - 5.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000009724 239.0
BYD1_k127_10386261_2 ATP-grasp domain - - - 0.0000000000001566 82.0
BYD1_k127_10386261_3 thymidylate kinase K00943 - 2.7.4.9 0.0000314 55.0
BYD1_k127_10400108_0 Belongs to the arginase family K01480 - 3.5.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 371.0
BYD1_k127_10400108_1 amidohydrolase K21613 - - 0.000000000000009035 78.0
BYD1_k127_10400108_2 ubiE/COQ5 methyltransferase family - - - 0.000000000001771 79.0
BYD1_k127_10490479_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000002157 119.0
BYD1_k127_10490479_1 Involved in the tonB-independent uptake of proteins - - - 0.00000000000009771 82.0
BYD1_k127_10490479_2 Histidine kinase - - - 0.0000000000008157 79.0
BYD1_k127_10524634_0 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000001525 197.0
BYD1_k127_10524634_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000003286 84.0
BYD1_k127_10526164_0 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000003159 215.0
BYD1_k127_10526164_1 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000005118 109.0
BYD1_k127_10526164_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000001725 71.0
BYD1_k127_10568631_0 NeuB family K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002456 398.0
BYD1_k127_10568631_1 GrpB protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002318 265.0
BYD1_k127_10568631_2 3-deoxy-7-phosphoheptulonate synthase K03856 - 2.5.1.54 0.0000000002287 63.0
BYD1_k127_10584995_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000004551 180.0
BYD1_k127_10584995_1 Putative stress-induced transcription regulator - - - 0.0000000000000000003403 96.0
BYD1_k127_1059304_0 MMPL family K06994 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 511.0
BYD1_k127_10603059_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 414.0
BYD1_k127_10603059_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 300.0
BYD1_k127_10603059_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005611 253.0
BYD1_k127_10603059_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000000000000000000000000000000000000000000000000000008017 201.0
BYD1_k127_10603059_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.0000000000000000000000000000000000000007227 152.0
BYD1_k127_10603059_5 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.0000000000000000000000000001831 124.0
BYD1_k127_10603059_6 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.000000000000000015 85.0
BYD1_k127_10603059_7 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000003386 60.0
BYD1_k127_10603059_8 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000008468 60.0
BYD1_k127_10603587_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 301.0
BYD1_k127_10603587_1 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001493 282.0
BYD1_k127_10603587_2 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000002624 206.0
BYD1_k127_10603587_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000008037 64.0
BYD1_k127_10631551_0 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 574.0
BYD1_k127_10631551_1 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004365 416.0
BYD1_k127_10631551_10 RibD C-terminal domain - - - 0.000000000000000000004582 96.0
BYD1_k127_10631551_11 BON domain - - - 0.0000000000000001524 85.0
BYD1_k127_10631551_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001809 301.0
BYD1_k127_10631551_3 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002188 283.0
BYD1_k127_10631551_4 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000000000000000000000003416 209.0
BYD1_k127_10631551_5 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000252 167.0
BYD1_k127_10631551_6 - - - - 0.0000000000000000000000000000000000000002829 168.0
BYD1_k127_10631551_7 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000000000000000000000000000001897 141.0
BYD1_k127_10631551_8 YCII-related domain - - - 0.00000000000000000000005335 106.0
BYD1_k127_10631551_9 F420H(2)-dependent quinone reductase - - - 0.0000000000000000000005592 101.0
BYD1_k127_10646831_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003985 401.0
BYD1_k127_10646831_1 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 - 0.000000000003222 76.0
BYD1_k127_10652234_0 Fructose-bisphosphate aldolase class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 469.0
BYD1_k127_10652234_1 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002453 425.0
BYD1_k127_10652234_10 YjbR - - - 0.00000000000000000000000000000000000000000000000000005283 190.0
BYD1_k127_10652234_11 GCN5 family acetyltransferase - - - 0.00000000000000000000000000000000000000000000000005511 196.0
BYD1_k127_10652234_12 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000001789 139.0
BYD1_k127_10652234_13 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.00000000000000000001609 98.0
BYD1_k127_10652234_14 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000432 86.0
BYD1_k127_10652234_2 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 402.0
BYD1_k127_10652234_3 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001144 375.0
BYD1_k127_10652234_4 Bacterial extracellular solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 339.0
BYD1_k127_10652234_5 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006014 304.0
BYD1_k127_10652234_6 Binding-protein-dependent transport system inner membrane component K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 297.0
BYD1_k127_10652234_7 Binding-protein-dependent transport system inner membrane component K11070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007543 281.0
BYD1_k127_10652234_8 Inositol monophosphatase K01092,K05602 GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000006872 243.0
BYD1_k127_10652234_9 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000003581 233.0
BYD1_k127_10702767_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002838 402.0
BYD1_k127_10702767_1 Pfam Zn-finger in ubiquitin-hydrolases and other protein K03455 - - 0.0000000000000000000000000177 119.0
BYD1_k127_10702767_2 Homocysteine S-methyltransferase K00544,K00548 - 2.1.1.13,2.1.1.5 0.0000009097 61.0
BYD1_k127_1077936_0 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008123 364.0
BYD1_k127_1077936_1 Protein of unknown function (DUF1385) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001445 244.0
BYD1_k127_1077936_2 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - 0.00000000000000000000195 102.0
BYD1_k127_10783600_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005043 593.0
BYD1_k127_10783600_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000001764 215.0
BYD1_k127_10783600_2 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000008315 161.0
BYD1_k127_10783600_3 lipid A biosynthesis acyltransferase K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.00000000000000000000000337 119.0
BYD1_k127_10783600_4 Lipid A biosynthesis K22311 GO:0003674,GO:0003824,GO:0005575,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016746,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.3.1.265 0.00000000000000000000001688 116.0
BYD1_k127_10783600_5 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.00000000000000000007806 98.0
BYD1_k127_10783600_6 Glycosyl transferase 4-like domain K08256 - 2.4.1.345 0.0000000000000000003934 93.0
BYD1_k127_10783600_7 DNA-binding transcription factor activity K03892 - - 0.00000000000306 72.0
BYD1_k127_10783600_8 Magnesium transport protein CorA K03284 - - 0.0000000001405 67.0
BYD1_k127_10784746_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 463.0
BYD1_k127_10784746_1 Required for chromosome condensation and partitioning K03529 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 351.0
BYD1_k127_10784746_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003836 291.0
BYD1_k127_10784746_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000007698 185.0
BYD1_k127_10784746_4 Ribosomal protein S16 K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000002044 116.0
BYD1_k127_10784746_5 Protein of unknown function (DUF3352) - - - 0.000000003932 70.0
BYD1_k127_10784746_6 Belongs to the UPF0109 family K06960 - - 0.00000005386 62.0
BYD1_k127_10793874_0 TIGRFAM Translation elongation factor K02355 - - 2.725e-199 644.0
BYD1_k127_10793874_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000099 305.0
BYD1_k127_10793874_2 transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000127 252.0
BYD1_k127_10793874_3 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000007458 184.0
BYD1_k127_10793874_4 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000003736 181.0
BYD1_k127_10793874_5 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000004238 175.0
BYD1_k127_10793874_6 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 GO:0000217,GO:0000400,GO:0000724,GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0008150,GO:0008152,GO:0009314,GO:0009378,GO:0009379,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0022607,GO:0031668,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051259,GO:0051260,GO:0051262,GO:0051276,GO:0051289,GO:0051716,GO:0065003,GO:0071103,GO:0071496,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494 3.6.4.12 0.000000000000000000000000000000001692 138.0
BYD1_k127_10793874_7 Trp repressor protein - - - 0.00000000000000000001086 95.0
BYD1_k127_10797902_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.000000000000000001093 89.0
BYD1_k127_10811129_0 PFAM Protein kinase domain - - - 0.0000000000000000005479 93.0
BYD1_k127_10868892_0 Family 4 glycosyl hydrolase K01222 - 3.2.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 560.0
BYD1_k127_10868892_1 N-acetylglucosamine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001624 239.0
BYD1_k127_10868892_2 Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion K01057,K02564 - 3.1.1.31,3.5.99.6 0.0000000000000000000000000000000000000000000000000165 190.0
BYD1_k127_10873095_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000009177 201.0
BYD1_k127_10873095_1 Bacterial-like globin K06886 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008144,GO:0008150,GO:0015669,GO:0015671,GO:0015893,GO:0016020,GO:0019825,GO:0020037,GO:0036094,GO:0042221,GO:0042493,GO:0044464,GO:0046906,GO:0048037,GO:0050896,GO:0051179,GO:0051234,GO:0071944,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000001609 162.0
BYD1_k127_10899651_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005624 280.0
BYD1_k127_10899651_1 Haloacid dehalogenase-like hydrolase family protein. Source PGD - - - 0.0000000000000000000000000000000000000000000000001681 185.0
BYD1_k127_10899651_2 Belongs to the BI1 family K06890 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000009227 179.0
BYD1_k127_10899651_3 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000001206 157.0
BYD1_k127_10899651_4 adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000002819 130.0
BYD1_k127_10899651_5 Amino-transferase class IV K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000007309 109.0
BYD1_k127_10899651_6 Septum formation - - - 0.0000000000006159 76.0
BYD1_k127_10899651_7 Pfam:DUF59 - - - 0.00000000001074 70.0
BYD1_k127_10899651_8 Septum formation - - - 0.00000000003904 76.0
BYD1_k127_10899651_9 Protein of unknown function (DUF433) - - - 0.00007501 53.0
BYD1_k127_10910385_0 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 408.0
BYD1_k127_10910385_1 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000002152 131.0
BYD1_k127_10910385_2 PFAM Amidohydrolase family K01468 - 3.5.2.7 0.000000000000007432 77.0
BYD1_k127_10939033_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008445 390.0
BYD1_k127_10939033_1 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001609 286.0
BYD1_k127_10939033_2 Lysyl oxidase - - - 0.00000000000000000000000000000000000000000003083 178.0
BYD1_k127_10939033_3 Zincin-like metallopeptidase - - - 0.000000000000000000000000000002769 124.0
BYD1_k127_10939033_4 Belongs to the thioredoxin family K03671 GO:0003674,GO:0003824,GO:0004791,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0016671,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0047134,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 - 0.0000000000000000000000000002056 120.0
BYD1_k127_10939033_5 Transcriptional regulator, arsR family - - - 0.00000000000002237 76.0
BYD1_k127_10939033_6 Belongs to the peptidase S33 family - - - 0.000000000000452 79.0
BYD1_k127_10960009_0 SMART Integrin alpha beta-propellor repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004578 514.0
BYD1_k127_10961262_0 Belongs to the peptidase S8 family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002063 254.0
BYD1_k127_10961262_1 helix_turn_helix, cAMP Regulatory protein K10914 GO:0000166,GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010675,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030312,GO:0030551,GO:0030552,GO:0030554,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0032993,GO:0036094,GO:0040007,GO:0043167,GO:0043168,GO:0043565,GO:0044212,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0062012,GO:0065007,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2000874,GO:2001141 - 0.0000000000000000000000000000000000000000000003373 175.0
BYD1_k127_10961262_2 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567 - 2.1.1.63 0.0000000000000000000000001595 112.0
BYD1_k127_10961262_3 GAF domain - - - 0.00000000000000000000004299 109.0
BYD1_k127_10967740_0 Elongation factor SelB, winged helix K03833 - - 0.0000000000000000000000000000000000000000000000000000000000001603 233.0
BYD1_k127_10969864_0 Elongation factor G C-terminus K06207 - - 1.316e-212 704.0
BYD1_k127_10969864_1 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004065 398.0
BYD1_k127_10969864_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008309 377.0
BYD1_k127_10969864_3 Binding-protein-dependent transport system inner membrane component K02025,K10118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000379 353.0
BYD1_k127_10969864_4 Binding-protein-dependent transport system inner membrane component K02026,K05815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 347.0
BYD1_k127_10969864_5 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 338.0
BYD1_k127_10969864_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 290.0
BYD1_k127_10969864_7 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000001162 272.0
BYD1_k127_10969864_8 Protein of unknown function (DUF3131) - - - 0.0000000000000000198 89.0
BYD1_k127_10969864_9 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000005507 60.0
BYD1_k127_11006660_0 RimK-like ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008105 276.0
BYD1_k127_11006660_1 Cd(II) Pb(II)-responsive transcriptional regulator - - - 0.0000000000000004799 85.0
BYD1_k127_11006660_2 Calcium/calmodulin dependent protein kinase II association domain - - - 0.0001043 51.0
BYD1_k127_11012891_0 Belongs to the class-I aminoacyl-tRNA synthetase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 344.0
BYD1_k127_11012891_1 COG1670 acetyltransferases, including N-acetylases of ribosomal proteins K00657,K07023 - 2.3.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000225 279.0
BYD1_k127_11012891_2 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008193 246.0
BYD1_k127_11012891_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.0000000000000000000000000000000005903 146.0
BYD1_k127_11012891_4 - - - - 0.00000000000000000000001876 101.0
BYD1_k127_11012891_5 Putative transposase of IS4/5 family (DUF4096) K07492 - - 0.00000000000000000006279 102.0
BYD1_k127_11019012_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 445.0
BYD1_k127_11019012_1 carbon starvation protein CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 394.0
BYD1_k127_11019012_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 304.0
BYD1_k127_11019012_3 - - - - 0.000000000000000000000000000000000009934 138.0
BYD1_k127_11019012_4 - - - - 0.0000000000000000000008368 106.0
BYD1_k127_11019012_5 Phosphoesterase, PA-phosphatase related - - - 0.0000000000001552 82.0
BYD1_k127_11019012_6 - - - - 0.000000006631 66.0
BYD1_k127_11023222_0 TPM domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001974 270.0
BYD1_k127_11023222_1 PFAM response regulator receiver K02483,K07669 - - 0.00000000000000000000000000000000000000000000000000000000000000995 224.0
BYD1_k127_11023222_2 N-4 methylation of cytosine K00590 - 2.1.1.113 0.000000000000000000000000000000000000000000000000008452 198.0
BYD1_k127_11023222_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02484 - 2.7.13.3 0.000000000000000000000000009787 124.0
BYD1_k127_11034755_0 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 424.0
BYD1_k127_11034755_1 Belongs to the dCTP deaminase family K01494 GO:0003674,GO:0003824,GO:0004170,GO:0016462,GO:0016787,GO:0016810,GO:0016814,GO:0016817,GO:0016818,GO:0019239,GO:0033973,GO:0047429 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000001997 260.0
BYD1_k127_11034755_2 Electron transfer flavoprotein domain K03521 GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016020,GO:0016491,GO:0022900,GO:0030312,GO:0040007,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0055114,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000003957 210.0
BYD1_k127_11034755_3 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000006226 213.0
BYD1_k127_11034755_4 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000003877 168.0
BYD1_k127_11034755_5 Metallo-beta-lactamase superfamily - - - 0.000000005248 63.0
BYD1_k127_11043364_0 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 485.0
BYD1_k127_11043364_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000004605 236.0
BYD1_k127_11043364_2 Peptidase M23 K21471 - - 0.000000000000000000002498 108.0
BYD1_k127_11043364_3 Type IV leader peptidase family K02236,K02654 - 3.4.23.43 0.00000000005174 73.0
BYD1_k127_11061094_0 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000003523 272.0
BYD1_k127_11061094_1 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000003404 149.0
BYD1_k127_11061094_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000752 52.0
BYD1_k127_11086275_0 Flavin containing amine oxidoreductase - - - 9.083e-242 757.0
BYD1_k127_11086275_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001495 504.0
BYD1_k127_11086275_10 Pfam:Pyridox_oxidase - - - 0.000000000000000000000000002592 119.0
BYD1_k127_11086275_11 Belongs to the arginase family K01476 - 3.5.3.1 0.0000000000000000000000005459 122.0
BYD1_k127_11086275_12 Bacterial protein of unknown function (DUF937) - - - 0.000000000000003651 89.0
BYD1_k127_11086275_13 Acetyltransferase (GNAT) domain - - - 0.00000000009722 66.0
BYD1_k127_11086275_14 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.00000121 56.0
BYD1_k127_11086275_2 Aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003007 460.0
BYD1_k127_11086275_3 TIGRFAM phytoene desaturase K10027 - 1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 430.0
BYD1_k127_11086275_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007326 405.0
BYD1_k127_11086275_5 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 327.0
BYD1_k127_11086275_6 Abc transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000005137 231.0
BYD1_k127_11086275_7 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000011 170.0
BYD1_k127_11086275_8 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000009216 153.0
BYD1_k127_11086275_9 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000002961 150.0
BYD1_k127_11101252_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 GO:0006091,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015672,GO:0015980,GO:0015988,GO:0015990,GO:0022900,GO:0022904,GO:0034220,GO:0044237,GO:0045333,GO:0051179,GO:0051234,GO:0055085,GO:0055114,GO:0098655,GO:0098660,GO:0098662,GO:1902600 1.9.3.1 2.439e-211 670.0
BYD1_k127_11101252_1 Required for the activity of the bacterial periplasmic transport system of putrescine K02055 GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042618,GO:0042619,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071704,GO:0071705,GO:0098657,GO:1901440,GO:1901441,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 547.0
BYD1_k127_11101252_10 Cytochrome C oxidase subunit II, periplasmic domain K02275 GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0006091,GO:0006119,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009319,GO:0009987,GO:0015980,GO:0016020,GO:0016021,GO:0016310,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0031224,GO:0031226,GO:0032991,GO:0034641,GO:0040007,GO:0042773,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044121,GO:0044237,GO:0044238,GO:0044281,GO:0044403,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0045333,GO:0046034,GO:0046483,GO:0051704,GO:0055086,GO:0055114,GO:0070069,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:1901135,GO:1901360,GO:1901564,GO:1902494 1.9.3.1 0.0000000000000000000000000000000000001723 160.0
BYD1_k127_11101252_11 periplasmic protein thiol disulfide oxidoreductases, DsbE subfamily K02199 - - 0.000000000000000000000000001183 119.0
BYD1_k127_11101252_12 TIGRFAM sporulation protein, yteA - - - 0.000000000000007747 80.0
BYD1_k127_11101252_13 PFAM blue (type 1) copper domain protein - - - 0.00000922 57.0
BYD1_k127_11101252_14 Copper-binding protein - - - 0.00001303 55.0
BYD1_k127_11101252_15 - - - - 0.0001539 53.0
BYD1_k127_11101252_2 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 471.0
BYD1_k127_11101252_3 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009243 373.0
BYD1_k127_11101252_4 PFAM binding-protein-dependent transport systems inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000908 311.0
BYD1_k127_11101252_5 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004182 314.0
BYD1_k127_11101252_6 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000078 255.0
BYD1_k127_11101252_7 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351,K07245 - - 0.000000000000000000000000000000000000000000000000000002965 205.0
BYD1_k127_11101252_8 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000001358 192.0
BYD1_k127_11101252_9 COG1845 Heme copper-type cytochrome quinol oxidase, subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000000000003826 154.0
BYD1_k127_11119949_0 Saccharopine dehydrogenase C-terminal domain K00290 - 1.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 542.0
BYD1_k127_11119949_1 PFAM peptidase S9 prolyl oligopeptidase active site domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008912 444.0
BYD1_k127_11119949_2 ABC transporter, ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000513 285.0
BYD1_k127_11119949_3 Putative heavy-metal-binding - - - 0.000000000000000000000000000000000000005416 162.0
BYD1_k127_11119949_4 ABC-type Na efflux pump, permease component K01992 - - 0.00000000000000000000000000000000001951 156.0
BYD1_k127_11119949_5 Protein of unknown function (DUF971) - - - 0.0000000000000000000000001316 110.0
BYD1_k127_11119949_6 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 0.00000000000000000000004637 110.0
BYD1_k127_11119949_7 PFAM blue (type 1) copper domain protein - - - 0.000000000000000003423 91.0
BYD1_k127_11119949_8 - - - - 0.0002651 49.0
BYD1_k127_11124651_0 DEAD DEAH box helicase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 521.0
BYD1_k127_11124651_1 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 337.0
BYD1_k127_11124651_10 histidine kinase, dimerisation and phosphoacceptor region - - - 0.00000000000000000000183 97.0
BYD1_k127_11124651_12 response regulator - - - 0.000000000001119 74.0
BYD1_k127_11124651_2 Sigma-70, region 4 type 2 K11618 - - 0.00000000000000000000000000000000000000000000000000000000000139 218.0
BYD1_k127_11124651_3 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.0000000000000000000000000000000000000000000003373 175.0
BYD1_k127_11124651_4 beta-lactamase K01286 - 3.4.16.4 0.00000000000000000000000000000000000000000006895 178.0
BYD1_k127_11124651_5 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template - - - 0.0000000000000000000000000000000000001492 145.0
BYD1_k127_11124651_7 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576 - 0.000000000000000000000000000001996 136.0
BYD1_k127_11124651_8 - - - - 0.00000000000000000000000000134 121.0
BYD1_k127_11124651_9 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000002017 106.0
BYD1_k127_11132004_0 Tetratricopeptide repeat - - - 1.277e-219 722.0
BYD1_k127_11132004_1 Protein of unknown function (DUF2089) - - - 0.0000000000000000000000000008393 117.0
BYD1_k127_11132004_2 Putative adhesin - - - 0.00000000001123 76.0
BYD1_k127_11151544_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 1.598e-207 653.0
BYD1_k127_11151544_1 protein complex oligomerization - GO:0001539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006928,GO:0006950,GO:0006974,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0019897,GO:0019898,GO:0031234,GO:0033554,GO:0040011,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0071944,GO:0071973,GO:0071978,GO:0097588,GO:0098552,GO:0098562 - 0.000000000000003539 82.0
BYD1_k127_1117927_0 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000791 417.0
BYD1_k127_1117927_1 Beta-ketoacyl synthase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 333.0
BYD1_k127_1117927_2 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000002753 222.0
BYD1_k127_1117927_3 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000006601 183.0
BYD1_k127_1117927_4 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000002306 98.0
BYD1_k127_1117927_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000001463 72.0
BYD1_k127_11182807_0 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001587 258.0
BYD1_k127_11182807_1 nucleotidyltransferase activity - - - 0.000000000000000000000000000000000000000000002714 175.0
BYD1_k127_11182807_2 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000618 51.0
BYD1_k127_11201441_0 - - - - 0.00000000000002828 72.0
BYD1_k127_11201441_1 methyltransferase - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000001196 83.0
BYD1_k127_11201749_0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term K17108 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 629.0
BYD1_k127_11201749_1 PFAM binding-protein-dependent transport systems inner membrane component K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 389.0
BYD1_k127_11201749_2 periplasmic binding protein LacI transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004024 357.0
BYD1_k127_11201749_3 carbohydrate transport K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004739 342.0
BYD1_k127_11201749_4 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 302.0
BYD1_k127_11236166_0 Belongs to the 5'-nucleotidase family K01081 - 3.1.3.5 3.52e-200 641.0
BYD1_k127_11236166_1 Endonuclease Exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 569.0
BYD1_k127_11236166_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000465 404.0
BYD1_k127_11236166_3 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000001055 231.0
BYD1_k127_11236166_4 DNA helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000007396 203.0
BYD1_k127_11236166_5 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K01179,K01637 - 3.2.1.4,4.1.3.1 0.0000000000000000000000000000000000000000000001683 188.0
BYD1_k127_11236166_6 helix_turn_helix, Lux Regulon K02479 - - 0.000000000000000000000000000000000000001841 157.0
BYD1_k127_11236166_7 Histidine kinase - - - 0.00000000000000000000000000002824 134.0
BYD1_k127_11236166_8 Involved in the tonB-independent uptake of proteins - - - 0.00000000000000000000000006641 123.0
BYD1_k127_11236166_9 NB-ARC domain - - - 0.000008902 55.0
BYD1_k127_11236529_0 Arsenical pump membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 395.0
BYD1_k127_11236529_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000001075 123.0
BYD1_k127_11236529_2 VIT family - - - 0.0000000000000000000000004644 111.0
BYD1_k127_11236529_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000001853 102.0
BYD1_k127_11267919_0 Sigma-70, region 4 - - - 0.000000006821 64.0
BYD1_k127_11271533_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000000000001409 192.0
BYD1_k127_11271533_1 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000174 145.0
BYD1_k127_11271533_2 Putative sugar-binding domain K11531 - - 0.000000000000001932 87.0
BYD1_k127_11282688_0 Malate synthase K01638 - 2.3.3.9 1.235e-235 738.0
BYD1_k127_11282688_1 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 394.0
BYD1_k127_11303964_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 2.261e-218 698.0
BYD1_k127_11303964_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030312,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0040007,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005563 275.0
BYD1_k127_11303964_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000451 289.0
BYD1_k127_11303964_3 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000002453 143.0
BYD1_k127_11303964_4 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000009443 126.0
BYD1_k127_11303964_5 ATP synthase F(0) sector subunit b K02109 - - 0.00000000000000000004093 97.0
BYD1_k127_11303964_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.000000003385 61.0
BYD1_k127_11303964_7 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter - - - 0.000000004553 60.0
BYD1_k127_11316478_0 PFAM binding-protein-dependent transport systems inner membrane component K02025,K05814,K10118,K10233,K15771,K17245 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 380.0
BYD1_k127_11316478_1 PFAM glycoside hydrolase, family 3 domain protein K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007337 375.0
BYD1_k127_11316478_2 glycerophosphodiester transmembrane transport K17246 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 342.0
BYD1_k127_11316478_3 carbohydrate transport K02027,K17244 - - 0.000000000000000000000000000000000000000000000000000000000001578 214.0
BYD1_k127_11316478_4 SIS domain K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000545 166.0
BYD1_k127_11322317_0 metallocarboxypeptidase activity K05996 - 3.4.17.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 406.0
BYD1_k127_11322317_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 344.0
BYD1_k127_11322317_2 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 338.0
BYD1_k127_11322317_3 Neutral zinc metallopeptidase K07054 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003147 317.0
BYD1_k127_11322317_4 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001427 281.0
BYD1_k127_11322317_5 PAC2 family - - - 0.0000000000000000000000000000000000000000000002544 181.0
BYD1_k127_11322317_6 PFAM HhH-GPD family protein - - - 0.000000000000000000000000000000000000000000008295 167.0
BYD1_k127_11322317_7 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000006376 117.0
BYD1_k127_11357045_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 325.0
BYD1_k127_11357045_1 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 299.0
BYD1_k127_11357045_2 FMN binding K03809 - 1.6.5.2 0.00000000000000000000000000000000000005393 151.0
BYD1_k127_11357045_4 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000001089 85.0
BYD1_k127_11357045_5 PspC domain K03973 - - 0.00000000000001784 79.0
BYD1_k127_11357045_6 Pfam:DUF385 - - - 0.00000000001699 72.0
BYD1_k127_11357045_7 membrane - - - 0.0000106 57.0
BYD1_k127_11363538_0 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.00000000000000000000000000000008821 142.0
BYD1_k127_11408791_0 Short-chain dehydrogenase reductase sdr - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009281 248.0
BYD1_k127_11408791_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000001724 188.0
BYD1_k127_11476482_0 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000004209 226.0
BYD1_k127_11476482_1 (Rhomboid) family - - - 0.00000000000000000000000000000000000000000000000000000009087 222.0
BYD1_k127_11476482_2 Bifunctional nuclease K08999 - - 0.0000000000000000000000000000000000003734 149.0
BYD1_k127_11476482_3 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000009432 144.0
BYD1_k127_11476482_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000001224 62.0
BYD1_k127_11499036_0 Fe-S oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 459.0
BYD1_k127_11505765_0 PFAM Glucose Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 409.0
BYD1_k127_11505765_1 PFAM glycosyl transferase, family 51 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003046 301.0
BYD1_k127_11505765_2 Protein of unknown function (DUF541) K09807 - - 0.00000000000000000000000001301 119.0
BYD1_k127_11532217_0 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004165 332.0
BYD1_k127_11532217_1 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 339.0
BYD1_k127_11532217_2 Belongs to the SEDS family K03588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002779 302.0
BYD1_k127_11532217_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003581 293.0
BYD1_k127_11532217_4 Penicillin-binding Protein dimerisation domain K03587,K08384 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008144,GO:0008150,GO:0008658,GO:0008955,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0031224,GO:0031226,GO:0031406,GO:0032153,GO:0033218,GO:0033293,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051301,GO:0071944,GO:0097159,GO:1901363,GO:1901681 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000002134 264.0
BYD1_k127_11532217_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000006285 260.0
BYD1_k127_11532217_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000965 197.0
BYD1_k127_11532217_7 MraZ protein, putative antitoxin-like K03925 - - 0.00000000000000000000000000000000001273 140.0
BYD1_k127_11546527_0 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 381.0
BYD1_k127_11546527_1 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002009 283.0
BYD1_k127_11546527_2 PFAM GTP cyclohydrolase I K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000134 243.0
BYD1_k127_11546527_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005787 247.0
BYD1_k127_11546527_4 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000001178 246.0
BYD1_k127_11546527_5 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000001129 237.0
BYD1_k127_11546527_6 Cobalamin B12-binding K01849 - 5.4.99.2 0.0000000000000000000000000000000000000000000000000000001002 198.0
BYD1_k127_11546527_7 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000002024 153.0
BYD1_k127_11546527_8 LAO AO transport system ATPase K07588 - - 0.000000000000000000000000002596 114.0
BYD1_k127_11566199_0 PFAM ATPase associated with various cellular activities, AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 381.0
BYD1_k127_11566199_1 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 319.0
BYD1_k127_11566199_10 - - - - 0.0000000000002027 83.0
BYD1_k127_11566199_2 PFAM aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000176 263.0
BYD1_k127_11566199_3 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007311 260.0
BYD1_k127_11566199_4 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000001992 227.0
BYD1_k127_11566199_5 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000000001392 207.0
BYD1_k127_11566199_6 'Molybdopterin - - - 0.0000000000000000000000000000000000000000000001172 184.0
BYD1_k127_11566199_7 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase K07141 - 2.7.7.76 0.000000000000000000000164 114.0
BYD1_k127_11566199_8 Methyltransferase domain K07003 - - 0.0000000000000000000004969 113.0
BYD1_k127_11566199_9 Predicted membrane protein (DUF2339) - - - 0.000000000000000003863 100.0
BYD1_k127_11575518_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001752 434.0
BYD1_k127_11575518_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002205 286.0
BYD1_k127_11575518_2 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000000001708 215.0
BYD1_k127_11575518_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.00000000000000000000000000000000000000000000000000000001822 198.0
BYD1_k127_11575518_4 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0001871,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0009986,GO:0030246,GO:0030247,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:2001065 - 0.000000000000000000000000000000002619 130.0
BYD1_k127_11575518_5 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000001504 68.0
BYD1_k127_11577665_0 PFAM Amidohydrolase 3 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 339.0
BYD1_k127_11577665_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000004479 245.0
BYD1_k127_11577665_2 COG0252 L-asparaginase archaeal Glu-tRNAGln amidotransferase subunit D K01424 - 3.5.1.1 0.00000000000000000006819 96.0
BYD1_k127_11587325_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.984e-254 793.0
BYD1_k127_11587325_1 LPXTG-motif cell wall anchor domain - - - 6.901e-219 718.0
BYD1_k127_11587325_2 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.0000000000000000008154 103.0
BYD1_k127_11587325_3 Protein of unknown function (DUF2630) - - - 0.000000000003529 68.0
BYD1_k127_11587325_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000004183 70.0
BYD1_k127_11625597_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.0000000000000000000000000761 111.0
BYD1_k127_11625597_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000264 69.0
BYD1_k127_11625597_2 - - - - 0.00004621 50.0
BYD1_k127_11631705_0 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006172 462.0
BYD1_k127_11631705_1 PFAM HhH-GPD family protein - - - 0.000000000000006771 77.0
BYD1_k127_11631705_2 - - - - 0.000001109 56.0
BYD1_k127_11644046_0 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000000000000000000001851 264.0
BYD1_k127_11644046_1 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.0000000000000000000000000000000000000002034 155.0
BYD1_k127_11644046_2 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.000000000000000000000000004976 122.0
BYD1_k127_11673450_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 5.24e-221 700.0
BYD1_k127_11673450_1 pfam nudix - - - 0.000000000000000000004185 104.0
BYD1_k127_11683178_0 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 585.0
BYD1_k127_11683178_1 carbohydrate transport K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 515.0
BYD1_k127_11683178_2 PFAM Binding-protein-dependent transport system inner membrane component K02025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 310.0
BYD1_k127_11683178_3 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000000000000000000000000000000000000000027 202.0
BYD1_k127_11688335_0 Helix-hairpin-helix motif K14162 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 550.0
BYD1_k127_11746874_0 Metallopeptidase family M24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 601.0
BYD1_k127_11746874_1 Aminotransferase class-III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 523.0
BYD1_k127_11746874_10 inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000001041 195.0
BYD1_k127_11746874_11 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000001588 179.0
BYD1_k127_11746874_12 Acid phosphatase homologues - - - 0.0000000000000000000000000308 112.0
BYD1_k127_11746874_13 - - - - 0.000000000000003576 77.0
BYD1_k127_11746874_14 RES - - - 0.0000000000000317 81.0
BYD1_k127_11746874_15 Cupin domain - - - 0.00000000028 65.0
BYD1_k127_11746874_2 Transketolase, pyrimidine binding domain K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 480.0
BYD1_k127_11746874_3 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 471.0
BYD1_k127_11746874_4 Dehydrogenase E1 component K00161,K21416 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000997 456.0
BYD1_k127_11746874_5 thiamine-containing compound biosynthetic process K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 347.0
BYD1_k127_11746874_6 ABC transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 326.0
BYD1_k127_11746874_7 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020,K00042 - 1.1.1.31,1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000001161 268.0
BYD1_k127_11746874_8 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000009851 196.0
BYD1_k127_11746874_9 PFAM Diacylglycerol kinase, catalytic - - - 0.00000000000000000000000000000000000000000000000003347 195.0
BYD1_k127_11766078_0 Aldehyde oxidase and xanthine dehydrogenase a b hammerhead K03520,K11177 - 1.17.1.4,1.2.5.3 0.0 1239.0
BYD1_k127_11766078_1 RsgA GTPase K06949 - 3.1.3.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 333.0
BYD1_k127_11766078_10 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000002037 164.0
BYD1_k127_11766078_11 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000005033 160.0
BYD1_k127_11766078_12 oxidoreductase activity, acting on CH-OH group of donors K09386 - - 0.0000000000000000000000000000000000001678 145.0
BYD1_k127_11766078_13 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000003334 135.0
BYD1_k127_11766078_2 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 298.0
BYD1_k127_11766078_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 294.0
BYD1_k127_11766078_4 introduces a magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX K03404,K03405 - 6.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000003395 284.0
BYD1_k127_11766078_5 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003976 254.0
BYD1_k127_11766078_6 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000006689 239.0
BYD1_k127_11766078_7 metallochaperone-like domain K07402 - - 0.00000000000000000000000000000000000000000000000000000000000000000007118 246.0
BYD1_k127_11766078_8 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000002387 239.0
BYD1_k127_11766078_9 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000002369 203.0
BYD1_k127_1178598_0 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000006058 198.0
BYD1_k127_1178598_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000001618 196.0
BYD1_k127_11790848_0 Peptidase dimerisation domain K01436,K01438,K01439 - 3.5.1.16,3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004216 512.0
BYD1_k127_11790848_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 462.0
BYD1_k127_11790848_2 Participates in initiation and elongation during chromosome replication K02314,K02316,K17680 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000004598 201.0
BYD1_k127_11800175_0 nucleoside hydrolase K01239,K01250 - 3.2.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 361.0
BYD1_k127_11800175_1 ATPase activity K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000002517 205.0
BYD1_k127_11800175_3 phosphorelay sensor kinase activity K16923,K18967 - 2.7.7.65 0.00000000000000000000000000000000000000000001661 176.0
BYD1_k127_11800175_4 ATPases associated with a variety of cellular activities K16786,K16787 - - 0.000000000000000000000000000000000000000009099 171.0
BYD1_k127_11800175_5 methyltransferase - - - 0.00000000000000000000000000000000000000002258 159.0
BYD1_k127_11800175_6 Cobalt transport protein K16785 - - 0.0000000000000000000000000000000000000493 153.0
BYD1_k127_11800175_7 GrpB protein - - - 0.00000000004905 70.0
BYD1_k127_11824728_0 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000008317 144.0
BYD1_k127_11824728_1 PFAM VanW family protein - - - 0.0000000000000000000000000000002078 143.0
BYD1_k127_11824728_2 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000004044 122.0
BYD1_k127_11824728_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000002041 78.0
BYD1_k127_11824728_4 metal cluster binding - - - 0.000000175 64.0
BYD1_k127_11824728_5 Pilus assembly protein K02282 - - 0.00009641 49.0
BYD1_k127_11828353_0 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003373 273.0
BYD1_k127_11828353_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000001371 231.0
BYD1_k127_11828353_2 redox protein, regulator of disulfide bond formation K07397 - - 0.0000000000001232 74.0
BYD1_k127_11828353_3 Domain of unknown function (DUF4395) - - - 0.00000000003379 71.0
BYD1_k127_11851286_0 oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005208 318.0
BYD1_k127_11851286_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000003923 177.0
BYD1_k127_11851286_2 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000008809 134.0
BYD1_k127_11862090_0 PFAM transglutaminase domain protein - - - 0.0000000000000000000000000000000000001841 162.0
BYD1_k127_1187954_0 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 1.824e-217 698.0
BYD1_k127_1187954_1 Carbamoyl-phosphate synthetase large chain domain protein K01968 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 423.0
BYD1_k127_1187954_2 Biotin-requiring enzyme - - - 0.0000000000001618 83.0
BYD1_k127_11914728_0 Magnesium transport protein CorA K03284 - - 0.00000000000000000000000000000000000000000000000008516 192.0
BYD1_k127_11914728_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000001219 150.0
BYD1_k127_11914728_2 PFAM Transglycosylase associated protein - - - 0.000000000001617 70.0
BYD1_k127_11937581_0 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009725 395.0
BYD1_k127_11937581_1 membrane - - - 0.0000000000000000000000000000001829 134.0
BYD1_k127_11937581_2 pyridoxamine 5'-phosphate oxidase - - - 0.00000000000000000000000001452 115.0
BYD1_k127_11938337_0 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 5.049e-285 884.0
BYD1_k127_11938337_1 spermidine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000002208 296.0
BYD1_k127_11965495_0 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 335.0
BYD1_k127_11965495_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 318.0
BYD1_k127_11965495_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000001913 100.0
BYD1_k127_11971297_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000045 244.0
BYD1_k127_11971297_1 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000004768 177.0
BYD1_k127_11971297_2 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000003198 98.0
BYD1_k127_11971297_3 COGs COG4270 membrane protein - - - 0.00000000000003624 79.0
BYD1_k127_11971727_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000776 137.0
BYD1_k127_11971727_1 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000007152 59.0
BYD1_k127_11982200_0 Belongs to the ClpA ClpB family K03696 GO:0006950,GO:0008150,GO:0010035,GO:0010038,GO:0042221,GO:0046686,GO:0046688,GO:0050896,GO:0097501,GO:1990169,GO:1990170 - 5.855e-235 739.0
BYD1_k127_11983390_0 dTDP-4-dehydrorhamnose 3,5-epimerase K01790 - 5.1.3.13 0.00000000000000000000000000006646 130.0
BYD1_k127_11983390_1 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.000000000000000000000000001776 120.0
BYD1_k127_1201545_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003855 264.0
BYD1_k127_1201545_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000003921 235.0
BYD1_k127_1201545_2 Belongs to the pyruvate kinase family K00873 GO:0003674,GO:0003824,GO:0004743,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016020,GO:0016052,GO:0016053,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0040007,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.40 0.000000000000000000006024 96.0
BYD1_k127_12051458_0 Ferrous iron transport B domain protein K04759 - - 0.0000000000000000000000000000000003445 140.0
BYD1_k127_12051458_1 Family of unknown function (DUF5317) - - - 0.00000002291 60.0
BYD1_k127_12064876_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 1.398e-264 857.0
BYD1_k127_12064876_1 Protein of unknown function (DUF3131) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000699 610.0
BYD1_k127_12064876_2 PFAM glycoside hydrolase family 39 K01198 - 3.2.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 618.0
BYD1_k127_12064876_3 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 291.0
BYD1_k127_12064876_4 membrane K15977 - - 0.000000000002316 75.0
BYD1_k127_12075747_0 Glycosyltransferase like family 2 K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000001283 263.0
BYD1_k127_12075747_1 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000008127 162.0
BYD1_k127_12075747_2 Glyco_18 K01448,K07260,K20276 - 3.4.17.14,3.5.1.28 0.000000000000000000000000000000000005634 159.0
BYD1_k127_12106900_0 Aminotransferase class-III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009656 388.0
BYD1_k127_12106900_1 Mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000002409 231.0
BYD1_k127_12106900_2 helix_turn_helix isocitrate lyase regulation - - - 0.00000000000000000000000000000000000000000000000000007437 203.0
BYD1_k127_12106900_3 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000003006 183.0
BYD1_k127_12106900_4 thiolester hydrolase activity - - - 0.0000000000000000000000000000002278 136.0
BYD1_k127_12141791_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00113 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 431.0
BYD1_k127_12141791_1 PFAM fumarate reductase succinate dehydrogenase flavoprotein domain protein K00112 - 1.1.5.3 0.0000000000000000000000000000000000000000000000000000000002534 219.0
BYD1_k127_12141791_2 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000003525 175.0
BYD1_k127_12141791_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000106 118.0
BYD1_k127_12153354_0 Protein of unknown function (DUF2867) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006019 511.0
BYD1_k127_12153354_1 PFAM DNA photolyase, FAD-binding K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 410.0
BYD1_k127_12153354_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000001459 222.0
BYD1_k127_12153354_3 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000004728 178.0
BYD1_k127_12153354_4 negative regulation of translational initiation - - - 0.00000000000000000000000000001655 125.0
BYD1_k127_12153354_5 luxR family - - - 0.000000000000000000000000005243 118.0
BYD1_k127_12159791_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003532 470.0
BYD1_k127_12159791_1 - - - - 0.00000000000000000000000000000000000000000000000000000002486 203.0
BYD1_k127_12159791_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000003313 181.0
BYD1_k127_12159791_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000869 189.0
BYD1_k127_12159791_4 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000103 186.0
BYD1_k127_12160791_0 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.000000000001094 81.0
BYD1_k127_1232192_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 307.0
BYD1_k127_1232192_1 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000004037 120.0
BYD1_k127_1232192_2 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0003254 48.0
BYD1_k127_1267003_0 Rieske [2Fe-2S] domain K03890 - - 0.0000000000000000000000000000000000000000000000000000000000001376 233.0
BYD1_k127_1267003_1 cytochrome C K03889 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000004305 174.0
BYD1_k127_1280764_0 PFAM MMPL domain protein K06994 - - 0.00000000000000000000000000000000000000000000000000000000000007029 223.0
BYD1_k127_1280764_1 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00000000000000000000000000000001094 135.0
BYD1_k127_1280764_2 - - - - 0.0000000000000000000000000003436 124.0
BYD1_k127_1310408_0 von Willebrand factor, type A - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 323.0
BYD1_k127_1310408_1 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000657 218.0
BYD1_k127_1310408_2 PFAM von Willebrand factor type A - - - 0.0000000000000000000000000000000000001931 150.0
BYD1_k127_1333618_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 8.782e-293 921.0
BYD1_k127_1333618_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 407.0
BYD1_k127_1333618_2 Thioesterase superfamily - - - 0.000000000000000000000002571 108.0
BYD1_k127_1333618_3 DNA alkylation repair - - - 0.0000002708 63.0
BYD1_k127_1370273_0 inositol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 407.0
BYD1_k127_1370273_1 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 310.0
BYD1_k127_1370273_10 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000751 92.0
BYD1_k127_1370273_11 - - - - 0.00000000000000003325 91.0
BYD1_k127_1370273_12 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000005855 86.0
BYD1_k127_1370273_13 GyrI-like small molecule binding domain - - - 0.000000000000000818 85.0
BYD1_k127_1370273_15 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000001259 60.0
BYD1_k127_1370273_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 300.0
BYD1_k127_1370273_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000001725 204.0
BYD1_k127_1370273_4 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000004711 200.0
BYD1_k127_1370273_5 FR47-like protein K03829 - - 0.0000000000000000000000000000000000000000000000002814 188.0
BYD1_k127_1370273_6 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000005051 196.0
BYD1_k127_1370273_7 pyridoxamine 5-phosphate - - - 0.000000000000000000000000000000000000000001502 164.0
BYD1_k127_1370273_8 Virulence factor BrkB K07058 - - 0.000000000000000000000000000000000000000034 165.0
BYD1_k127_1370273_9 Mazg nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000306 104.0
BYD1_k127_1423070_0 PFAM PQQ enzyme repeat - - - 0.000001108 61.0
BYD1_k127_1423070_1 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0001622 48.0
BYD1_k127_1475405_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009753 490.0
BYD1_k127_1475405_1 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000005368 206.0
BYD1_k127_1475405_2 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000009729 148.0
BYD1_k127_1475405_3 Tellurite resistance protein TerB - - - 0.0000000000000000000000000000000216 133.0
BYD1_k127_1475405_4 - - - - 0.0000000000000004718 89.0
BYD1_k127_148297_0 Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA K01610 - 4.1.1.49 9.056e-201 645.0
BYD1_k127_148297_1 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 466.0
BYD1_k127_148297_2 signal transduction histidine kinase regulating citrate malate metabolism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004349 458.0
BYD1_k127_148297_3 Tripartite tricarboxylate transporter family receptor K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 403.0
BYD1_k127_148297_4 Cys Met metabolism K01739,K01758,K01761 - 2.5.1.48,4.4.1.1,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005012 396.0
BYD1_k127_148297_5 Belongs to the MenA family. Type 1 subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006084 257.0
BYD1_k127_148297_6 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002345 246.0
BYD1_k127_148297_7 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000000000000000000000000004859 152.0
BYD1_k127_1485887_0 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007971 575.0
BYD1_k127_1485887_1 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009239 337.0
BYD1_k127_1485887_2 KaiC K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 298.0
BYD1_k127_1485887_3 COG2041 Sulfite oxidase and related enzymes - - - 0.0000000000000000000000000000000000000000000000000000002383 206.0
BYD1_k127_1485887_4 C-terminal four TMM region of protein-O-mannosyltransferase - - - 0.00000000000000000000000000000000000000000007328 168.0
BYD1_k127_1485887_5 bacterial-type RNA polymerase transcription factor activity, metal ion regulated sequence-specific DNA binding - - - 0.000000000000000000003563 100.0
BYD1_k127_1485887_6 Cupredoxin-like domain - - - 0.000000000000000005517 96.0
BYD1_k127_1490667_0 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 390.0
BYD1_k127_1490667_1 Ribosomal protein S3, C-terminal domain K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001381 271.0
BYD1_k127_1490667_10 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000375 117.0
BYD1_k127_1490667_11 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000006852 98.0
BYD1_k127_1490667_12 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.0000000000000000000001787 103.0
BYD1_k127_1490667_13 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000001451 107.0
BYD1_k127_1490667_14 Forms part of the polypeptide exit tunnel K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000003725 65.0
BYD1_k127_1490667_15 Belongs to the universal ribosomal protein uL29 family K02904 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008150,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000004342 53.0
BYD1_k127_1490667_2 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016020,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040007,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001708 262.0
BYD1_k127_1490667_3 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005224 241.0
BYD1_k127_1490667_4 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000006532 210.0
BYD1_k127_1490667_5 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000003237 194.0
BYD1_k127_1490667_6 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000005881 166.0
BYD1_k127_1490667_7 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.00000000000000000000000000000000000001168 155.0
BYD1_k127_1490667_8 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.00000000000000000000000000000000000008012 145.0
BYD1_k127_1490667_9 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000001505 121.0
BYD1_k127_1492045_0 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000006005 153.0
BYD1_k127_1492045_1 Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway K00852 - 2.7.1.15 0.00000000000000000000000000002833 126.0
BYD1_k127_1571854_0 TIGRFAM methylmalonyl-CoA mutase, large subunit K01848 - 5.4.99.2 1.234e-219 695.0
BYD1_k127_1571854_1 PFAM Lipopolysaccharide kinase (Kdo WaaP) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008226 377.0
BYD1_k127_1571854_2 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 329.0
BYD1_k127_1571854_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004526 291.0
BYD1_k127_1571854_4 pfkB family carbohydrate kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001234 246.0
BYD1_k127_1571854_5 Nitroreductase - - - 0.000000000000000000000000000000005467 140.0
BYD1_k127_1571854_6 BAAT Acyl-CoA thioester hydrolase - - - 0.0000000000000000000000001652 120.0
BYD1_k127_1571854_7 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.00000002916 64.0
BYD1_k127_1571854_8 Acetyltransferase (GNAT) domain - - - 0.00001349 55.0
BYD1_k127_1573390_0 metallopeptidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001747 267.0
BYD1_k127_1573390_1 metallopeptidase activity K03568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000147 239.0
BYD1_k127_1595959_0 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 308.0
BYD1_k127_1595959_1 GTP binding - - - 0.00000000000000001852 89.0
BYD1_k127_1603267_0 Anion-transporting ATPase K01551 - 3.6.3.16 0.000000000000000000000000000000000000000000000000000109 189.0
BYD1_k127_1603267_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000005172 131.0
BYD1_k127_1603267_2 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000002797 127.0
BYD1_k127_1603267_3 GCN5-related N-acetyl-transferase K06975 - - 0.00000000000000000000001064 111.0
BYD1_k127_1603267_4 Sugar efflux transporter for intercellular exchange K15383 - - 0.0000000000000000009148 87.0
BYD1_k127_1603267_6 Glycosyltransferase family 87 - - - 0.0007891 51.0
BYD1_k127_1605341_0 MMPL family K06994 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009677 526.0
BYD1_k127_1605341_1 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 326.0
BYD1_k127_1605341_2 metal-dependent hydrolase with the TIM-barrel fold K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000001454 233.0
BYD1_k127_1605341_3 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000003292 190.0
BYD1_k127_1605341_4 OsmC-like protein K04063 - - 0.000000000000000000000000000000002429 136.0
BYD1_k127_1605341_5 BetI-type transcriptional repressor, C-terminal - - - 0.000000000000000000004189 102.0
BYD1_k127_1605341_6 PFAM Cysteine-rich secretory protein family - - - 0.000000000000000001379 96.0
BYD1_k127_1605341_7 Right handed beta helix region - - - 0.0006586 51.0
BYD1_k127_1666409_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 514.0
BYD1_k127_1666409_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000001236 92.0
BYD1_k127_1666409_2 Binds directly to 16S ribosomal RNA K02968 - - 0.000004451 57.0
BYD1_k127_1666409_3 EamA-like transporter family - - - 0.00003406 55.0
BYD1_k127_1670603_0 PFAM NERD domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002829 305.0
BYD1_k127_1670603_1 SnoaL-like domain - - - 0.000000000000000004003 93.0
BYD1_k127_1670603_2 ADP-ribosylglycohydrolase - - - 0.0004207 45.0
BYD1_k127_1676926_0 PFAM Acetyl-CoA hydrolase transferase K01067 - 3.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004893 442.0
BYD1_k127_1676926_1 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000004512 234.0
BYD1_k127_1676926_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000245 193.0
BYD1_k127_1676926_3 Cold shock protein K03704 - - 0.0000000009431 71.0
BYD1_k127_1689592_0 Uncharacterized ACR, COG1399 K07040 - - 0.0000000000000000000000002084 121.0
BYD1_k127_1689592_1 negative regulation of DNA recombination - - - 0.000000006042 64.0
BYD1_k127_1691576_0 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 301.0
BYD1_k127_1691576_1 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0001871,GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005623,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009986,GO:0009987,GO:0010467,GO:0019538,GO:0030246,GO:0030247,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2001065 - 0.000000000000000000000000000000000000000000000000000000000000000000023 238.0
BYD1_k127_1691576_2 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000001775 214.0
BYD1_k127_1691576_3 Amino acid kinase family K09903 - 2.7.4.22 0.000000000000009948 82.0
BYD1_k127_1691576_4 Belongs to the UPF0102 family K07460 - - 0.000004811 54.0
BYD1_k127_1712395_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00122,K00335 - 1.17.1.9,1.6.5.3 4.59e-225 719.0
BYD1_k127_1712395_1 2Fe-2S iron-sulfur cluster binding domain K00336 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 445.0
BYD1_k127_1712395_10 Uncharacterized conserved protein (DUF2277) - - - 0.000000000001611 74.0
BYD1_k127_1712395_11 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.000000000001779 67.0
BYD1_k127_1712395_12 - - - - 0.00001505 57.0
BYD1_k127_1712395_13 transcriptional regulator - - - 0.0008495 51.0
BYD1_k127_1712395_2 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 352.0
BYD1_k127_1712395_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000527 288.0
BYD1_k127_1712395_4 Belongs to the peptidase S51 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009192 274.0
BYD1_k127_1712395_5 3-methyladenine DNA glycosylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002301 256.0
BYD1_k127_1712395_6 Cupin superfamily (DUF985) K09705 - - 0.000000000000000000000000000000000000000000000000000000005613 201.0
BYD1_k127_1712395_7 chloramphenicol K18554 - - 0.000000000000000000000000000000000000000001836 174.0
BYD1_k127_1712395_8 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000001758 119.0
BYD1_k127_1712395_9 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000774 92.0
BYD1_k127_1724606_0 GXGXG motif K00265 - 1.4.1.13,1.4.1.14 2.614e-255 823.0
BYD1_k127_1779034_0 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005494 276.0
BYD1_k127_1779034_1 ABC transporter - - - 0.000000000000000000000000000000000000001294 168.0
BYD1_k127_1779034_2 Sugar efflux transporter for intercellular exchange K15383 - - 0.0000000000000005874 85.0
BYD1_k127_1806502_0 Involved in the oxidation of myo-inositol (MI) to 2- keto-myo-inositol (2KMI or 2-inosose) K00010 - 1.1.1.18,1.1.1.369 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 303.0
BYD1_k127_1806502_1 Belongs to the TPP enzyme family K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001401 275.0
BYD1_k127_1806502_2 ABC transporter substrate-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000333 266.0
BYD1_k127_1806502_3 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000000000000000000000008938 216.0
BYD1_k127_1806502_4 permease K02025 - - 0.0000000000000000000000000000000000000000000000000000000001246 215.0
BYD1_k127_1806502_5 Xylose isomerase-like TIM barrel K00010,K03335 - 1.1.1.18,1.1.1.369,4.2.1.44 0.000000000000000000000000000000000000000000000001803 195.0
BYD1_k127_1844012_0 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 303.0
BYD1_k127_1844012_1 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006416 256.0
BYD1_k127_1844012_2 Domain of unknown function (DUF1905) - - - 0.00000000000000000000000000000000000000000000000002647 183.0
BYD1_k127_1844012_3 peroxiredoxin activity - - - 0.0002091 50.0
BYD1_k127_1844012_4 Response regulator receiver domain protein - - - 0.0004591 45.0
BYD1_k127_1857223_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 401.0
BYD1_k127_1857223_1 Acetolactate synthase K01652 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006872 383.0
BYD1_k127_1857223_2 involved in inositol metabolism K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000000000001211 228.0
BYD1_k127_1857223_3 Exonuclease K07502 - - 0.0000000000000000000000000000000000000001693 165.0
BYD1_k127_1892977_0 Multicopper oxidase - - - 1.861e-292 913.0
BYD1_k127_1894137_0 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009745 246.0
BYD1_k127_1894137_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000004099 260.0
BYD1_k127_1894137_2 BioY protein K03523 - - 0.0000000000000000000000000000000000000000000000000008482 191.0
BYD1_k127_1894137_3 Uncharacterized protein conserved in bacteria (DUF2236) - - - 0.000000000000000000000000000000000002163 154.0
BYD1_k127_1904907_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 3.912e-198 638.0
BYD1_k127_1904907_1 Proline racemase K01777,K12658 - 5.1.1.4,5.1.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002336 508.0
BYD1_k127_1904907_2 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000739 402.0
BYD1_k127_1904907_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009694 376.0
BYD1_k127_1904907_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 296.0
BYD1_k127_1904907_5 ATPases associated with a variety of cellular activities K09812 GO:0000910,GO:0005575,GO:0005623,GO:0005886,GO:0007049,GO:0008150,GO:0008356,GO:0009966,GO:0009987,GO:0010646,GO:0016020,GO:0016043,GO:0022402,GO:0022603,GO:0022607,GO:0023051,GO:0032506,GO:0042173,GO:0043937,GO:0043938,GO:0044085,GO:0044464,GO:0045595,GO:0045597,GO:0045881,GO:0048518,GO:0048522,GO:0048583,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051301,GO:0065007,GO:0070297,GO:0071840,GO:0071944,GO:0090529,GO:1902531 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000021 270.0
BYD1_k127_1904907_6 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000008682 192.0
BYD1_k127_1904907_7 DUF218 domain - - - 0.00000000000000000000000000000000004886 142.0
BYD1_k127_1904907_8 Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation K09811 - - 0.0000000000000000000000000000000003953 143.0
BYD1_k127_1904907_9 Acetyltransferase (GNAT) domain - - - 0.000001401 61.0
BYD1_k127_1956860_0 Dehydrogenase K16173 - 1.3.99.32 0.000000000000000000000000000000000000000000000000000000000000000000000363 241.0
BYD1_k127_1956860_1 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000001549 243.0
BYD1_k127_1956860_2 sequence-specific DNA binding K00567,K13529,K15051 - 2.1.1.63,3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000005195 235.0
BYD1_k127_1956860_3 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.000000000000000000000000000000000002973 147.0
BYD1_k127_198329_0 PhoQ Sensor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001259 626.0
BYD1_k127_198329_1 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 571.0
BYD1_k127_198329_10 Enoyl-CoA hydratase/isomerase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000001652 231.0
BYD1_k127_198329_11 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000006383 229.0
BYD1_k127_198329_12 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000009847 219.0
BYD1_k127_198329_13 PFAM regulatory protein TetR - - - 0.00000000000000000000000000000000000000000000000001016 195.0
BYD1_k127_198329_14 PFAM flavin reductase domain protein, FMN-binding K16048 - - 0.0000000000000000000000000000000000008676 146.0
BYD1_k127_198329_15 Pfam Polyketide cyclase dehydrase and lipid transport - - - 0.000000000000000000000000000005053 136.0
BYD1_k127_198329_16 Alpha/beta hydrolase family - - - 0.000000000000000000000000008987 124.0
BYD1_k127_198329_17 Ethyl tert-butyl ether degradation - - - 0.000000000006884 77.0
BYD1_k127_198329_18 Domain of unknown function (DUF378) K09779 - - 0.00000001519 59.0
BYD1_k127_198329_19 Histidine Phosphotransfer domain - - - 0.00000006699 59.0
BYD1_k127_198329_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 451.0
BYD1_k127_198329_20 Belongs to the UPF0354 family - - - 0.00000006841 63.0
BYD1_k127_198329_3 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 360.0
BYD1_k127_198329_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 317.0
BYD1_k127_198329_5 competence protein COMEC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004382 296.0
BYD1_k127_198329_6 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005057 291.0
BYD1_k127_198329_7 PFAM Enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000001256 264.0
BYD1_k127_198329_8 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000009965 237.0
BYD1_k127_198329_9 ROK family K00845,K00886 - 2.7.1.2,2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000002395 251.0
BYD1_k127_1996815_0 ketone body catabolic process K01026 - 2.8.3.1 5.068e-207 672.0
BYD1_k127_1996815_1 ABC-type sugar transport system, ATPase component K10441 - 3.6.3.17 9.118e-196 629.0
BYD1_k127_1996815_10 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001588 256.0
BYD1_k127_1996815_11 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001639 244.0
BYD1_k127_1996815_12 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000212 245.0
BYD1_k127_1996815_13 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000003512 243.0
BYD1_k127_1996815_14 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000005137 246.0
BYD1_k127_1996815_15 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000001106 247.0
BYD1_k127_1996815_16 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000001286 248.0
BYD1_k127_1996815_17 PFAM ROK family protein K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000003769 219.0
BYD1_k127_1996815_18 Fumarylacetoacetate (FAA) hydrolase family - - - 0.000000000000000000000000000000000000000000000000006128 191.0
BYD1_k127_1996815_19 UTRA K03710 - - 0.00000000000000000000000000000000000000000000000107 194.0
BYD1_k127_1996815_2 Belongs to the aldehyde dehydrogenase family K00141 - 1.2.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 481.0
BYD1_k127_1996815_20 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000001546 180.0
BYD1_k127_1996815_21 Creatinine amidohydrolase K01470 - 3.5.2.10 0.00000000000000000000000000000000000000000001086 172.0
BYD1_k127_1996815_22 NMT1/THI5 like - - - 0.0000000000000000000000000000002838 141.0
BYD1_k127_1996815_3 AP endonuclease family 2 C terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002883 466.0
BYD1_k127_1996815_4 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 340.0
BYD1_k127_1996815_5 Periplasmic binding protein domain K02058,K10439,K17213 GO:0003674,GO:0005215,GO:0005488,GO:0005534,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0008645,GO:0015144,GO:0015145,GO:0015749,GO:0015757,GO:0016020,GO:0016021,GO:0022857,GO:0030246,GO:0030288,GO:0030313,GO:0031224,GO:0031975,GO:0034219,GO:0036094,GO:0042597,GO:0044425,GO:0044464,GO:0048029,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 320.0
BYD1_k127_1996815_6 Belongs to the binding-protein-dependent transport system permease family K10440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 310.0
BYD1_k127_1996815_7 protein containing SIS (Sugar isomerase) phosphosugar binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 302.0
BYD1_k127_1996815_8 DeoC/LacD family aldolase K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001309 288.0
BYD1_k127_1996815_9 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000004067 252.0
BYD1_k127_2001830_0 PFAM Uncharacterised protein family UPF0182 K09118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 627.0
BYD1_k127_2001830_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000935 589.0
BYD1_k127_2065579_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000001407 177.0
BYD1_k127_2065579_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000001187 183.0
BYD1_k127_2065579_2 ACT domain K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000161 181.0
BYD1_k127_2079565_0 ATPases associated with a variety of cellular activities K05847 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 380.0
BYD1_k127_2079565_1 Lysine methyltransferase - - - 0.0000000000000000000000000000000000000000000000000245 184.0
BYD1_k127_2084307_0 PEP-utilising enzyme, mobile domain K01006 - 2.7.9.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 483.0
BYD1_k127_2084307_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K05555 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006509 449.0
BYD1_k127_2084307_2 Short-chain dehydrogenase reductase sdr K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001093 286.0
BYD1_k127_2084307_3 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001466 253.0
BYD1_k127_2084307_4 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000006231 175.0
BYD1_k127_2084307_5 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000009373 151.0
BYD1_k127_2087878_0 TIGRFAM Amidase, hydantoinase carbamoylase K02083,K06016 - 3.5.1.6,3.5.1.87,3.5.3.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 610.0
BYD1_k127_2087878_1 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 561.0
BYD1_k127_2087878_2 FAD linked oxidases, C-terminal domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 445.0
BYD1_k127_2087878_3 Thioesterase K07107 - - 0.0000000000000000000000000000000000000000000000000000000001298 209.0
BYD1_k127_2087878_4 Metal-dependent hydrolase - - - 0.0000000002227 61.0
BYD1_k127_2087878_5 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000001059 57.0
BYD1_k127_2138749_0 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 415.0
BYD1_k127_2138749_1 PFAM peptidase S58, DmpA K01266 - 3.4.11.19 0.000000000000000000000000000000000000000000000002014 179.0
BYD1_k127_2138749_2 COGs COG2912 conserved - - - 0.0000000000000000000000000000000000000000002841 169.0
BYD1_k127_2138749_3 -acetyltransferase - - - 0.000000000000000000000000000004109 135.0
BYD1_k127_2190_0 membrane K13277,K15125,K15539 - - 9.434e-208 706.0
BYD1_k127_2190_1 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008954 404.0
BYD1_k127_2190_2 HYR domain - - - 0.0000000000009645 83.0
BYD1_k127_2190_3 Protein of unknown function (DUF642) - - - 0.0000000002346 76.0
BYD1_k127_2215158_0 cyclic 2,3-diphosphoglycerate synthetase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 545.0
BYD1_k127_2215158_1 FAD-dependent pyridine nucleotide-disulfide oxidoreductase K17218 - 1.8.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008126 437.0
BYD1_k127_2215158_10 Sulfurtransferase TusA - - - 0.00000000000000000001239 101.0
BYD1_k127_2215158_11 redox protein regulator of disulfide bond formation K07397 - - 0.00000000000000000005728 96.0
BYD1_k127_2215158_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000008793 91.0
BYD1_k127_2215158_13 - - - - 0.000000000000000001797 94.0
BYD1_k127_2215158_14 Belongs to the sulfur carrier protein TusA family K04085 - - 0.000000000000003084 86.0
BYD1_k127_2215158_15 Belongs to the universal stress protein A family - - - 0.0000000003247 66.0
BYD1_k127_2215158_16 - - - - 0.0004391 52.0
BYD1_k127_2215158_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 419.0
BYD1_k127_2215158_3 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 332.0
BYD1_k127_2215158_4 AlkA N-terminal domain K13529 - 3.2.2.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 321.0
BYD1_k127_2215158_5 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000001789 169.0
BYD1_k127_2215158_6 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000006563 151.0
BYD1_k127_2215158_7 Polysaccharide deacetylase K22278 - 3.5.1.104 0.000000000000000000000000000000000000225 154.0
BYD1_k127_2215158_8 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000001781 107.0
BYD1_k127_2215158_9 Aminoacyl-tRNA editing domain K19055 - - 0.00000000000000000000002045 109.0
BYD1_k127_2263049_0 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000007641 204.0
BYD1_k127_2263049_1 ECF sigma factor K03088 - - 0.0000000000000000000000000000000000000000000005671 173.0
BYD1_k127_2263049_2 Belongs to the NiCoT transporter (TC 2.A.52) family - - - 0.0000000000000000000000000000000000000000003415 179.0
BYD1_k127_2263049_3 Anti-sigma-K factor rskA - - - 0.00001162 57.0
BYD1_k127_2292654_0 Protein of unknown function (DUF3830) - - - 0.000000000000000000000000000000000000004168 153.0
BYD1_k127_2292654_1 OHCU decarboxylase - - - 0.00000000000000000000007324 106.0
BYD1_k127_2292654_2 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.000000000000000004231 91.0
BYD1_k127_2292654_3 Catalyzes the oxidation of uric acid to 5- hydroxyisourate, which is further processed to form (S)-allantoin K00365 - 1.7.3.3 0.00000000003717 72.0
BYD1_k127_2300505_0 AcrB/AcrD/AcrF family - - - 0.0 1289.0
BYD1_k127_2300505_1 AcrB/AcrD/AcrF family - - - 5.196e-276 884.0
BYD1_k127_2300505_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000007593 109.0
BYD1_k127_2321945_0 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.00000000000000000000000000000000000000000001103 181.0
BYD1_k127_2337273_0 response regulator receiver K07658,K07668 - - 0.00000000000000000000000000000000000000000000000000001432 195.0
BYD1_k127_2337273_1 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000002116 138.0
BYD1_k127_2337273_2 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000471 139.0
BYD1_k127_2342980_0 Acyl-CoA synthetase (AMP-forming) AMP-acid ligase II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 488.0
BYD1_k127_2342980_1 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009059 422.0
BYD1_k127_2342980_10 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000006927 199.0
BYD1_k127_2342980_11 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000002896 168.0
BYD1_k127_2342980_12 Methyltransferase domain - - - 0.0000000000000000000000000000000000009195 148.0
BYD1_k127_2342980_13 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000002308 151.0
BYD1_k127_2342980_14 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000005193 83.0
BYD1_k127_2342980_15 ATP:ADP antiporter activity K15762 - - 0.00000000001072 79.0
BYD1_k127_2342980_16 PFAM Cyclic nucleotide-binding - - - 0.00000000005587 77.0
BYD1_k127_2342980_17 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.000000001645 69.0
BYD1_k127_2342980_2 Belongs to the peptidase S33 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004268 291.0
BYD1_k127_2342980_3 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000173 270.0
BYD1_k127_2342980_4 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006343 259.0
BYD1_k127_2342980_5 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000001237 243.0
BYD1_k127_2342980_6 ABC transporter substrate-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000001313 251.0
BYD1_k127_2342980_7 Carbohydrate ABC transporter membrane protein 1, CUT1 family K02025 - - 0.00000000000000000000000000000000000000000000000000000000000334 221.0
BYD1_k127_2342980_8 oxidoreductase activity, acting on CH-OH group of donors K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000005234 219.0
BYD1_k127_2342980_9 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000000000008623 194.0
BYD1_k127_236573_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 3e-322 1006.0
BYD1_k127_236573_1 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000003306 201.0
BYD1_k127_236573_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000004623 169.0
BYD1_k127_236573_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0000001451 58.0
BYD1_k127_2389533_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 445.0
BYD1_k127_2389533_1 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003108 258.0
BYD1_k127_2389533_2 cephalosporin hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000003134 220.0
BYD1_k127_2389533_3 Cephalosporin hydroxylase - - - 0.00000000000000000000000000000000000000000000000000000000002744 225.0
BYD1_k127_2389533_4 Involved in manganese homeostasis. Might activate the transcription of the mntABCD operon K03709 - - 0.00000000000000000000000000000000006242 145.0
BYD1_k127_2389533_6 phosphate transporter K03306 - - 0.00000000000000000001367 92.0
BYD1_k127_2396954_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 626.0
BYD1_k127_2396954_1 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000001157 210.0
BYD1_k127_2396954_2 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000009073 164.0
BYD1_k127_2396954_3 PFAM cell divisionFtsK SpoIIIE K03466 - - 0.00004725 55.0
BYD1_k127_2397245_0 amino acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 494.0
BYD1_k127_2397245_1 PFAM metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000003908 211.0
BYD1_k127_2397245_2 TrkA-C domain K03499 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000001462 210.0
BYD1_k127_2397245_3 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000001039 138.0
BYD1_k127_2397245_4 PFAM TrkA-N domain protein K03499 - - 0.0000000000000000000000000000003872 132.0
BYD1_k127_2397245_5 Universal stress protein family - - - 0.000000000000000000004386 99.0
BYD1_k127_2397245_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0004873 46.0
BYD1_k127_2430782_0 histidine kinase dimerisation and phosphoacceptor region K03406,K07673,K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000001836 256.0
BYD1_k127_2430782_1 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000002028 238.0
BYD1_k127_2430782_2 Universal stress protein - - - 0.00000000001172 72.0
BYD1_k127_2430782_3 CoA binding domain K09181 - - 0.0000000005552 71.0
BYD1_k127_2455895_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000007176 251.0
BYD1_k127_2455895_1 Belongs to the FtsK SpoIIIE SftA family K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000002717 238.0
BYD1_k127_2455895_2 Competence-damaged protein K03742 - 3.5.1.42 0.0000000000000000000000000000000006213 138.0
BYD1_k127_2455895_3 SMART helix-turn-helix domain protein - - - 0.0000000000000000291 96.0
BYD1_k127_246341_0 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000016 144.0
BYD1_k127_246341_1 Participates in initiation and elongation during chromosome replication K02314 GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0032392,GO:0032508,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051276,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 3.6.4.12 0.000000000000000000000000000000005086 131.0
BYD1_k127_246341_2 Probable zinc-ribbon domain - - - 0.00000000000000000000000000000008316 129.0
BYD1_k127_246341_3 - - - - 0.000000000001239 79.0
BYD1_k127_246341_4 Dodecin K09165 - - 0.00000001095 61.0
BYD1_k127_2484286_0 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005645 311.0
BYD1_k127_2484286_1 Domain of unknown function (DU1801) - - - 0.0000000000000000000001058 102.0
BYD1_k127_2484286_2 methyltransferase - - - 0.0000000000000000009049 89.0
BYD1_k127_251140_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000667 226.0
BYD1_k127_251140_1 HD domain - - - 0.000000000000000000000000000000000000000000000000001207 191.0
BYD1_k127_251140_2 Family of unknown function (DUF5317) - - - 0.00000000345 70.0
BYD1_k127_2516443_0 xylulokinase activity K00848,K00851,K00854,K00862 - 2.7.1.12,2.7.1.17,2.7.1.215,2.7.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000001032 267.0
BYD1_k127_2516443_1 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000000000000000000000001439 216.0
BYD1_k127_2516443_2 Dihydroxyacetone kinase K05878 - 2.7.1.121 0.000000000000000000000000000000000002546 149.0
BYD1_k127_2531108_0 Cysteine synthase K01697,K01738,K12339 - 2.5.1.47,4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 501.0
BYD1_k127_2531108_1 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 319.0
BYD1_k127_2531108_2 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000004556 206.0
BYD1_k127_2531108_3 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000001961 158.0
BYD1_k127_2531108_4 asnC family K03719 - - 0.000000000000000000000000000000001215 135.0
BYD1_k127_2531108_5 Belongs to the MenA family. Type 1 subfamily - - - 0.00000000000000000000000000000006552 128.0
BYD1_k127_2531108_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000001317 134.0
BYD1_k127_2531108_7 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000007042 107.0
BYD1_k127_2531108_8 Phosphate acyltransferases - - - 0.000000000000005609 85.0
BYD1_k127_2531108_9 An anti-sigma factor for extracytoplasmic function (ECF) sigma factor SigK. ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut extracytoplasmically (site-1 protease, S1P), then within the membrane itself (site-2 protease, S2P, Rip1), while cytoplasmic proteases finish degrading the regulatory protein, liberating the sigma factor - - - 0.000009476 56.0
BYD1_k127_2543042_0 ATPase associated with various cellular K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 439.0
BYD1_k127_2543042_1 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000173 223.0
BYD1_k127_2543042_2 Penicillin binding protein transpeptidase domain K05364 - - 0.00000000000000000000000000000000000000000000000000006299 197.0
BYD1_k127_2550606_0 Cell cycle protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 346.0
BYD1_k127_2550606_1 Cell division protein FtsI penicillin-binding protein K05364 - - 0.0000000000000000000000000000003942 142.0
BYD1_k127_2550606_2 PFAM Forkhead-associated protein - - - 0.00000000000000000000004924 109.0
BYD1_k127_2550606_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.000000000000000000000337 101.0
BYD1_k127_2550606_4 Penicillin binding protein transpeptidase domain K05364 - - 0.0000000002419 62.0
BYD1_k127_2550606_5 zinc finger - - - 0.00003181 56.0
BYD1_k127_2565216_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 419.0
BYD1_k127_2565216_1 Sigma-54 interaction domain K03696 - - 0.00000000000000000000000000000000000000003049 156.0
BYD1_k127_2568_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000003429 141.0
BYD1_k127_2568_1 Double zinc ribbon - - - 0.0000000000001745 75.0
BYD1_k127_2568_2 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000005085 66.0
BYD1_k127_2612646_0 Integral membrane protein TerC family K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 340.0
BYD1_k127_2623210_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 440.0
BYD1_k127_2623210_1 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008373 288.0
BYD1_k127_2623210_2 dienelactone hydrolase - - - 0.00000000000000000000000001371 116.0
BYD1_k127_2675781_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 326.0
BYD1_k127_2675781_1 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000001516 150.0
BYD1_k127_2675781_2 Histidine kinase K07646 - 2.7.13.3 0.00000000000000000000000000000006346 144.0
BYD1_k127_2689215_0 Anticodon-binding domain of tRNA K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 537.0
BYD1_k127_2689215_1 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 338.0
BYD1_k127_2689215_2 calcium, potassium:sodium antiporter activity K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 310.0
BYD1_k127_2689215_3 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000001761 190.0
BYD1_k127_2689215_4 cell envelope-related transcriptional attenuator - - - 0.00000000000000000000000000000000000000000000000005303 201.0
BYD1_k127_2689215_5 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000002437 116.0
BYD1_k127_2689215_6 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963,K03111,K15125 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016020,GO:0019538,GO:0022626,GO:0022627,GO:0030312,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0071944,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000001159 106.0
BYD1_k127_2689215_7 Cellulose biosynthesis protein BcsQ K02282 - - 0.000000000000000000001711 103.0
BYD1_k127_2689215_8 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.00000000000000000002375 99.0
BYD1_k127_269413_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 320.0
BYD1_k127_269413_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000004539 258.0
BYD1_k127_269413_2 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000008665 217.0
BYD1_k127_2695640_0 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 619.0
BYD1_k127_2695640_1 Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX K03405 - 6.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 387.0
BYD1_k127_2700086_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 390.0
BYD1_k127_2700086_1 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02033,K12369 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 366.0
BYD1_k127_2700086_2 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 334.0
BYD1_k127_2700086_3 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006682 346.0
BYD1_k127_2700086_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.000000000002812 73.0
BYD1_k127_270023_0 SMART alpha amylase catalytic sub domain K01187 - 3.2.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 490.0
BYD1_k127_270023_1 PFAM Binding-protein-dependent transport system inner membrane component K02025,K10233 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 347.0
BYD1_k127_270023_2 ABC transporter substrate-binding protein K10232 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 344.0
BYD1_k127_270023_3 PFAM binding-protein-dependent transport systems inner membrane component K10234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 331.0
BYD1_k127_270023_4 PFAM Bacterial regulatory proteins, lacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007572 268.0
BYD1_k127_270023_5 valyl-tRNA aminoacylation K01873 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046483,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0000000000000000000002879 104.0
BYD1_k127_2731408_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 2.704e-301 940.0
BYD1_k127_2744235_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 619.0
BYD1_k127_2744235_1 magnesium chelatase, ChlI subunit K07391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006857 438.0
BYD1_k127_2744235_10 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951,K01139 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0008728,GO:0008893,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009259,GO:0009260,GO:0009267,GO:0009405,GO:0009605,GO:0009987,GO:0009991,GO:0015968,GO:0015969,GO:0015970,GO:0016020,GO:0016740,GO:0016772,GO:0016778,GO:0016787,GO:0016788,GO:0016794,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030145,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034035,GO:0034036,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042578,GO:0042594,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044419,GO:0044464,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051704,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.7.6.5,3.1.7.2 0.000000000000000000001435 100.0
BYD1_k127_2744235_11 Bacterial Ig-like domain K06894 - - 0.000000000007671 78.0
BYD1_k127_2744235_12 F420H(2)-dependent quinone reductase - - - 0.0000001309 64.0
BYD1_k127_2744235_13 - - - - 0.0000007079 57.0
BYD1_k127_2744235_2 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 396.0
BYD1_k127_2744235_3 peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 300.0
BYD1_k127_2744235_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002795 267.0
BYD1_k127_2744235_5 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000007642 225.0
BYD1_k127_2744235_6 PFAM DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000000001865 205.0
BYD1_k127_2744235_7 PFAM Methicillin resistance protein - - - 0.0000000000000000000000000000000000000000000002295 181.0
BYD1_k127_2744235_8 Trypsin-like serine protease - - - 0.000000000000000000000000000000000007869 153.0
BYD1_k127_2744235_9 Methicillin resistance protein K05363,K18354 - 2.3.2.10 0.00000000000000000000001631 115.0
BYD1_k127_2748735_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 1.007e-197 640.0
BYD1_k127_2748735_1 Belongs to the glycosyl hydrolase 57 family K22451 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008282 497.0
BYD1_k127_2748735_10 Belongs to the glycosyl hydrolase 57 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006651 268.0
BYD1_k127_2748735_11 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001274 229.0
BYD1_k127_2748735_12 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000008898 235.0
BYD1_k127_2748735_13 Bacterial transferase hexapeptide (six repeats) K13018 - 2.3.1.201 0.0000000000000000000000000003078 127.0
BYD1_k127_2748735_14 carboxylic ester hydrolase activity - - - 0.00000000000000000000006624 111.0
BYD1_k127_2748735_15 - - - - 0.000000000000000000002553 99.0
BYD1_k127_2748735_16 - - - - 0.0000000000000000003553 98.0
BYD1_k127_2748735_17 amino acid-binding ACT domain protein - - - 0.00004623 53.0
BYD1_k127_2748735_2 Alpha-amylase domain K01176 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 471.0
BYD1_k127_2748735_3 PFAM alpha amylase, catalytic K01208 - 3.2.1.133,3.2.1.135,3.2.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 458.0
BYD1_k127_2748735_4 PFAM extracellular solute-binding protein family 1 K15770 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 381.0
BYD1_k127_2748735_5 PFAM binding-protein-dependent transport systems inner membrane component K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 340.0
BYD1_k127_2748735_6 PFAM binding-protein-dependent transport systems inner membrane component K15772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 329.0
BYD1_k127_2748735_7 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 332.0
BYD1_k127_2748735_8 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 316.0
BYD1_k127_2748735_9 periplasmic binding protein LacI transcriptional regulator K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008514 276.0
BYD1_k127_2750258_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000005562 176.0
BYD1_k127_2750258_1 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000002227 143.0
BYD1_k127_2750258_2 Redoxin - - - 0.000000000000000002001 97.0
BYD1_k127_2750258_3 - - - - 0.00004862 52.0
BYD1_k127_2752686_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009987,GO:0010501,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070035,GO:0071704,GO:0090304,GO:0140098,GO:1901360 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 431.0
BYD1_k127_2752686_1 Dak1_2 K07030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 355.0
BYD1_k127_2752686_2 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.00000000000000000000000000000000000000000001258 169.0
BYD1_k127_2752686_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000002198 55.0
BYD1_k127_2752686_4 Protein conserved in bacteria - - - 0.0000004342 58.0
BYD1_k127_2792615_0 PFAM Nucleotidyl transferase K00963 - 2.7.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004366 366.0
BYD1_k127_2792615_1 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 311.0
BYD1_k127_2792615_2 helix_turn_helix, Lux Regulon K02479 - - 0.000000000000000000000000000000000000000000000000000000000000008671 222.0
BYD1_k127_2792615_3 spore germination - - - 0.000000000000000000000000000000000000000000000000000005381 201.0
BYD1_k127_2792615_4 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000002287 174.0
BYD1_k127_2792615_5 - - - - 0.0000000000000000000002886 111.0
BYD1_k127_2792615_6 TIGRFAM DNA binding domain - - - 0.0000000000002207 79.0
BYD1_k127_2792615_7 - - - - 0.000000000001276 76.0
BYD1_k127_2792615_8 DNA-templated transcription, initiation K03088 - - 0.000000002889 68.0
BYD1_k127_2792615_9 Heavy metal translocating P-type atpase - - - 0.00000001175 67.0
BYD1_k127_2809917_0 Lipase maturation factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005941 596.0
BYD1_k127_2809917_1 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 468.0
BYD1_k127_2809917_2 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 415.0
BYD1_k127_2809917_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008883 319.0
BYD1_k127_2809917_4 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001366 249.0
BYD1_k127_2809917_5 YbaK prolyl-tRNA synthetase associated region - - - 0.0000000000000000000000000000000000000000000000000000001878 198.0
BYD1_k127_2834625_0 Electron transfer flavoprotein K03522 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 331.0
BYD1_k127_2834625_1 Belongs to the GcvT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008019 276.0
BYD1_k127_2834625_2 Electron transfer flavoprotein, beta subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001916 278.0
BYD1_k127_283900_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008347 484.0
BYD1_k127_283900_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003439 456.0
BYD1_k127_283900_2 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 356.0
BYD1_k127_283900_3 DsrE/DsrF-like family - - - 0.000000000000000000000000003172 115.0
BYD1_k127_2898693_0 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 314.0
BYD1_k127_2898693_1 NfeD-like C-terminal, partner-binding K07403 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001002 279.0
BYD1_k127_2898693_2 PFAM response regulator receiver K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004694 263.0
BYD1_k127_2898693_3 Prolyl oligopeptidase family K06889 - - 0.00000000000000000008491 103.0
BYD1_k127_2939843_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 4.917e-195 640.0
BYD1_k127_2939843_1 PFAM major facilitator superfamily MFS_1 K08151 - - 0.00000000000000002238 93.0
BYD1_k127_2939843_2 Belongs to the peptidase S51 family K13282 - 3.4.15.6 0.0001986 52.0
BYD1_k127_2949075_0 Transcriptional activator domain - - - 0.00000000000000000000000000000000000000000000000000000000000000155 233.0
BYD1_k127_2949075_1 Flavodoxin domain K00230 - 1.3.5.3 0.00000000000000000000000000000000000000000000000000000000221 205.0
BYD1_k127_2949075_2 Pfam:Pyridox_oxidase - - - 0.00000000000000000000000002095 115.0
BYD1_k127_2949075_3 RDD family - - - 0.00000000000000000000004137 106.0
BYD1_k127_2949075_4 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase - - - 0.00000000000000003864 93.0
BYD1_k127_3005546_0 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 485.0
BYD1_k127_3005546_1 Cupin 2 conserved barrel domain protein - - - 0.000000000000001756 87.0
BYD1_k127_3008764_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000009261 193.0
BYD1_k127_3008764_1 Spermine spermidine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000002599 151.0
BYD1_k127_3009985_0 Zn-dependent metallo-hydrolase RNA specificity domain K07577,K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 458.0
BYD1_k127_3009985_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000006762 142.0
BYD1_k127_3009985_2 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000006764 64.0
BYD1_k127_3024372_0 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 547.0
BYD1_k127_3024372_1 Pyridoxal-dependent decarboxylase conserved domain K01593 - 4.1.1.105,4.1.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009991 507.0
BYD1_k127_3024372_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 299.0
BYD1_k127_3024372_3 Peptidase family M50 K06212,K06402 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000002769 151.0
BYD1_k127_3024372_4 CHRD domain - - - 0.0000000000000000000000000000000001673 139.0
BYD1_k127_3024372_5 cheY-homologous receiver domain - - - 0.00000000000000000000000000002564 123.0
BYD1_k127_3024372_6 - - - - 0.0000000000000000000000001391 111.0
BYD1_k127_3024372_7 Predicted integral membrane protein (DUF2269) - - - 0.00000000000007114 78.0
BYD1_k127_3024372_8 Protein of unknown function (DUF1461) - - - 0.000000000001415 77.0
BYD1_k127_3024372_9 Domain of unknown function (DUF4332) - - - 0.000000003088 64.0
BYD1_k127_3072473_0 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000000000000000000000000000000000004047 158.0
BYD1_k127_3072473_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000007439 138.0
BYD1_k127_3072473_2 heme oxygenase (decyclizing) activity K21481 - 1.14.99.57 0.0005146 47.0
BYD1_k127_3081073_0 protein related to plant photosystem II stability assembly factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 447.0
BYD1_k127_3081073_1 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit - - - 0.000000000000000000004172 108.0
BYD1_k127_3081073_2 Molybdopterin converting factor subunit K03635,K21142 - 2.8.1.12 0.00000000000000000001152 93.0
BYD1_k127_3081073_3 ThiS family - - - 0.0000000000000000008784 93.0
BYD1_k127_3081934_0 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 295.0
BYD1_k127_3081934_1 Histidine biosynthesis bifunctional protein HisIE K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000006716 189.0
BYD1_k127_3081934_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000003301 74.0
BYD1_k127_3081934_3 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000001294 60.0
BYD1_k127_3140227_0 TOBE domain K11072,K11076 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 311.0
BYD1_k127_3140227_1 Binding-protein-dependent transport system inner membrane component K11071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009619 281.0
BYD1_k127_3140227_2 ABC transporter, solute-binding protein K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000001148 241.0
BYD1_k127_314346_0 aminotransferase class I and II K10907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 488.0
BYD1_k127_314346_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003863 475.0
BYD1_k127_314346_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000004393 198.0
BYD1_k127_3151555_0 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 346.0
BYD1_k127_3151555_1 GXGXG motif K00265 - 1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008364 307.0
BYD1_k127_3193309_0 PFAM aminotransferase, class I K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006693 460.0
BYD1_k127_3193309_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 452.0
BYD1_k127_3193309_10 Thiamin pyrophosphokinase, vitamin B1 binding domain K00949 - 2.7.6.2 0.00000000000000000000000000001247 128.0
BYD1_k127_3193309_11 Rieske 2Fe-2S - - - 0.000000000000000000000004521 111.0
BYD1_k127_3193309_12 Rhodanese Homology Domain - - - 0.0000000000000000001815 99.0
BYD1_k127_3193309_13 Uncharacterized conserved protein (DUF2203) - - - 0.0000000000000001163 89.0
BYD1_k127_3193309_14 glycolate biosynthetic process K01091,K06019,K13292 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008967,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 3.1.3.18,3.6.1.1 0.0000000000000009742 91.0
BYD1_k127_3193309_15 SAM-dependent methyltransferase - - - 0.000000000287 67.0
BYD1_k127_3193309_16 Cytochrome b K03887 - - 0.0000000005126 59.0
BYD1_k127_3193309_17 Galactose oxidase, central domain - - - 0.000000002624 70.0
BYD1_k127_3193309_18 Cytochrome c, class I - - - 0.0000234 56.0
BYD1_k127_3193309_19 PQQ-like domain K17713 - - 0.00005362 55.0
BYD1_k127_3193309_2 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00015 - 1.1.1.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 393.0
BYD1_k127_3193309_20 Helix-turn-helix domain - - - 0.000317 54.0
BYD1_k127_3193309_3 Cytochrome b(N-terminal)/b6/petB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001072 283.0
BYD1_k127_3193309_4 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000004211 244.0
BYD1_k127_3193309_5 PFAM LmbE family protein - - - 0.0000000000000000000000000000000000000000000000000002406 197.0
BYD1_k127_3193309_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K00982,K03564 - 1.11.1.15,2.7.7.42,2.7.7.89 0.0000000000000000000000000000000000000000000000003026 187.0
BYD1_k127_3193309_7 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000001798 178.0
BYD1_k127_3193309_8 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis - - - 0.000000000000000000000000000000000000000003437 162.0
BYD1_k127_3193309_9 Aminoacyl-tRNA editing domain - - - 0.00000000000000000000000000000009605 131.0
BYD1_k127_3197066_0 Bacterial protein of unknown function (DUF853) K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000762 513.0
BYD1_k127_3197066_1 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 494.0
BYD1_k127_3197066_2 Aldehyde dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 340.0
BYD1_k127_3197066_3 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 328.0
BYD1_k127_3197066_4 amino acid-binding ACT domain protein K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000001811 241.0
BYD1_k127_3197066_5 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000001185 213.0
BYD1_k127_3197066_6 Chromosome partitioning K03496 - - 0.000000000000000000000000000000000005205 147.0
BYD1_k127_3197066_7 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000003905 133.0
BYD1_k127_3197066_8 LeuA allosteric (dimerisation) domain K01649 - 2.3.3.13 0.0003146 50.0
BYD1_k127_3203837_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798,K06027 GO:0000166,GO:0003674,GO:0003824,GO:0004175,GO:0004176,GO:0004222,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0006979,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0008270,GO:0009056,GO:0009057,GO:0010468,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019222,GO:0019538,GO:0030145,GO:0030163,GO:0030554,GO:0031224,GO:0031226,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043273,GO:0044238,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050896,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0098796,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 3.6.4.6 0.000000000000000000000000000000000000000000000000000000000000000008343 241.0
BYD1_k127_3203925_0 ABC transporter K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 394.0
BYD1_k127_3203925_1 ABC-type transport system involved in multi-copper enzyme maturation permease component K01992 - - 0.0000000000000000000000000000000000002949 151.0
BYD1_k127_3203925_2 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000004382 142.0
BYD1_k127_3207762_0 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 370.0
BYD1_k127_3207762_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004254 378.0
BYD1_k127_3207762_10 Secreted repeat of unknown function - - - 0.0000000000000000000000000005691 121.0
BYD1_k127_3207762_2 Integral membrane protein TerC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 285.0
BYD1_k127_3207762_3 TIGRFAM metallophosphoesterase, MG_246 BB_0505 family K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002796 284.0
BYD1_k127_3207762_4 Protein of unknown function (DUF998) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002111 256.0
BYD1_k127_3207762_5 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000158 205.0
BYD1_k127_3207762_6 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.000000000000000000000000000000000000000000000000000003421 203.0
BYD1_k127_3207762_7 DNA polymerase alpha chain like domain K07053 - 3.1.3.97 0.000000000000000000000000000000000000000000000002177 184.0
BYD1_k127_3207762_8 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000567 141.0
BYD1_k127_3207762_9 hyperosmotic response K04065 - - 0.00000000000000000000000000001819 126.0
BYD1_k127_3223765_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001599 253.0
BYD1_k127_3223765_1 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000005362 238.0
BYD1_k127_3223765_2 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000008728 169.0
BYD1_k127_3225894_0 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 290.0
BYD1_k127_3225894_1 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007084 258.0
BYD1_k127_3225894_2 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000008214 209.0
BYD1_k127_3225894_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768,K12132 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.11.1,5.2.1.8 0.000000000000000000000000000000000000000000002221 169.0
BYD1_k127_3225894_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767,K03768,K12132 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016021,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0031224,GO:0031226,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.11.1,5.2.1.8 0.000000000000000000000000000000233 131.0
BYD1_k127_3225894_5 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.0000000000000000000000002687 114.0
BYD1_k127_3225894_6 exo-alpha-(2->6)-sialidase activity - - - 0.000000006718 68.0
BYD1_k127_3225894_7 Glutaredoxin K18917 - 1.20.4.3 0.00001476 52.0
BYD1_k127_328371_0 Belongs to the NiCoT transporter (TC 2.A.52) family K07241 - - 0.00000000000000000000000000000000000000000000000000000000000000005208 236.0
BYD1_k127_328371_1 Belongs to the Fur family K03711,K09825 - - 0.0000000000000000785 85.0
BYD1_k127_3287339_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 360.0
BYD1_k127_3287339_1 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family K02503 - - 0.000000000000000000000000000000000000003653 150.0
BYD1_k127_3287339_2 Ribosomal protein S21 K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000005973 57.0
BYD1_k127_3289910_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 580.0
BYD1_k127_3289910_1 Participates in both transcription termination and antitermination K02600 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 380.0
BYD1_k127_3289910_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 339.0
BYD1_k127_3289910_3 zinc metalloprotease K04771,K11749,K16922 GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006355,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016021,GO:0016787,GO:0019219,GO:0019222,GO:0019538,GO:0031224,GO:0031226,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0040007,GO:0043170,GO:0043856,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0045152,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0080090,GO:0140096,GO:0140110,GO:1901564,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 3.4.21.107 0.0000000000000000000000000000000000001968 153.0
BYD1_k127_3289910_4 Protein of unknown function (DUF448) K07742 - - 0.00000000000000001373 91.0
BYD1_k127_3425011_0 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000005354 258.0
BYD1_k127_3425011_1 Trimethylamine methyltransferase (MTTB) - - - 0.00000000000000000000000000000000000000000000000001548 183.0
BYD1_k127_3425011_2 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000284 124.0
BYD1_k127_3425011_3 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040008,GO:0044464,GO:0045926,GO:0048519,GO:0050789,GO:0065007,GO:0071944 - 0.00000000000000004095 89.0
BYD1_k127_3425011_4 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000001656 70.0
BYD1_k127_3438628_0 helix_turn_helix, cAMP Regulatory protein K01420,K10914,K21561,K21564 - - 0.000000000000000000000000000000000000000002676 168.0
BYD1_k127_3438628_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000001739 99.0
BYD1_k127_3438628_2 PFAM molybdopterin binding domain - - - 0.00000000264 66.0
BYD1_k127_3460522_0 C-terminal four TMM region of protein-O-mannosyltransferase K00728 - 2.4.1.109 0.00000000000000000000000000000003085 148.0
BYD1_k127_3460522_1 glycosyl transferase group 1 K08256 - 2.4.1.345 0.000000000000000000000000000001566 128.0
BYD1_k127_3460522_2 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000004058 72.0
BYD1_k127_3482898_0 MMPL family K06994,K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 471.0
BYD1_k127_3482898_1 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 403.0
BYD1_k127_3482898_2 Galactose oxidase, central domain - - - 0.0000000000000000000000000000000000000000000000000000798 199.0
BYD1_k127_3482898_3 Acetyltransferase (GNAT) domain - - - 0.00001681 50.0
BYD1_k127_3506124_0 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 1.2e-211 706.0
BYD1_k127_3506124_1 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus K00341 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004785 463.0
BYD1_k127_3506124_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 357.0
BYD1_k127_3506124_3 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00335,K18331,K22339 - 1.12.1.3,1.17.1.11,1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006429 315.0
BYD1_k127_3506124_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001627 287.0
BYD1_k127_3506124_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000199 116.0
BYD1_k127_3506124_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0008137,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0016655,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000005269 93.0
BYD1_k127_3506124_7 Belongs to the complex I subunit 6 family K00339,K05578 - 1.6.5.3 0.0000000000000000259 97.0
BYD1_k127_3506124_8 4Fe-4S dicluster domain K00338 - 1.6.5.3 0.0000000001076 70.0
BYD1_k127_3558012_0 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009277 342.0
BYD1_k127_3558012_1 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 306.0
BYD1_k127_3558012_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000539 302.0
BYD1_k127_3558012_3 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000001944 209.0
BYD1_k127_3558012_4 Cbs domain - - - 0.000000000000000000000000000000000000000000003023 172.0
BYD1_k127_3558012_5 family 18 - - - 0.000000000000002334 89.0
BYD1_k127_3558012_6 - - - - 0.0006036 52.0
BYD1_k127_355805_0 drug exporters of the RND superfamily K06994 - - 0.000000000000000000000006282 102.0
BYD1_k127_355805_1 - - - - 0.000000001514 69.0
BYD1_k127_355805_2 response regulator - - - 0.000000009261 61.0
BYD1_k127_3601132_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 1.714e-198 627.0
BYD1_k127_3601132_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000001423 168.0
BYD1_k127_3601132_2 Prephenate dehydrogenase K00210,K04517 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.3.1.12 0.000000000000000000000000000001049 132.0
BYD1_k127_3631741_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000007805 250.0
BYD1_k127_3631741_1 permease - - - 0.00000000000000000001018 104.0
BYD1_k127_3650296_0 Protein tyrosine kinase - - - 0.00000000000000000000000053 119.0
BYD1_k127_3650296_1 PFAM FAD linked oxidase domain protein - - - 0.00000005624 61.0
BYD1_k127_3708020_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008945 297.0
BYD1_k127_3708020_1 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 2.1.1.198 0.00000000000000000000000000000000000000000000000000003573 211.0
BYD1_k127_3708020_2 Carbon-nitrogen hydrolase K01916 - 6.3.1.5 0.00000000000001078 78.0
BYD1_k127_3718781_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004574 262.0
BYD1_k127_3718781_1 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000006682 212.0
BYD1_k127_3718781_2 Stage II sporulation protein K06381 - - 0.00000000000000000000000000000000000002431 164.0
BYD1_k127_3718781_3 Aminoglycoside phosphotransferase - - - 0.000000000000000000000008377 112.0
BYD1_k127_3718781_4 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000006597 91.0
BYD1_k127_3718781_5 protein secretion by the type IV secretion system - - - 0.00000000000001713 85.0
BYD1_k127_3718781_6 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.00008344 54.0
BYD1_k127_3734052_0 4-Hydroxyphenylpyruvate dioxygenase K00457,K16421 GO:0003674,GO:0003824,GO:0003868,GO:0006082,GO:0006520,GO:0006570,GO:0006572,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.27,1.13.11.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 497.0
BYD1_k127_3734052_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005892 303.0
BYD1_k127_3734052_12 Pfam Wyosine base formation - - - 0.0000009973 61.0
BYD1_k127_3734052_2 Proline dehydrogenase K00318 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 293.0
BYD1_k127_3734052_3 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000251 282.0
BYD1_k127_3734052_4 WD40-like Beta Propeller Repeat - - - 0.00000000000000000000000000000000000000000000000000000000000002367 231.0
BYD1_k127_3734052_5 Dienelactone hydrolase family - - - 0.00000000000000000000000000000000000000000000000002716 205.0
BYD1_k127_3734052_6 4Fe-4S binding domain - GO:0001666,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0009605,GO:0009607,GO:0009628,GO:0036293,GO:0043207,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0070482,GO:0075136 - 0.0000000000000000000000000006125 118.0
BYD1_k127_3734052_8 AdoMet dependent proline di-methyltransferase - - - 0.00000000000000000000000355 118.0
BYD1_k127_3734052_9 Family of unknown function (DUF5317) - - - 0.000000000000000000757 93.0
BYD1_k127_3779766_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 452.0
BYD1_k127_3779766_1 DNA alkylation repair - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 406.0
BYD1_k127_3779766_10 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.0000000000000000425 83.0
BYD1_k127_3779766_11 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000009758 81.0
BYD1_k127_3779766_12 Universal stress protein family - - - 0.00002827 55.0
BYD1_k127_3779766_13 luxR family - - - 0.000243 52.0
BYD1_k127_3779766_2 Sodium/hydrogen exchanger family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 305.0
BYD1_k127_3779766_3 Polysulphide reductase K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006168 288.0
BYD1_k127_3779766_4 COG0437 Fe-S-cluster-containing hydrogenase components 1 K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004085 259.0
BYD1_k127_3779766_5 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000000000000000000000000000000000000000000002083 240.0
BYD1_k127_3779766_6 Transcriptional regulator - - - 0.000000000000000000000000000000001045 135.0
BYD1_k127_3779766_7 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000005321 125.0
BYD1_k127_3779766_8 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000001724 124.0
BYD1_k127_3779766_9 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000004322 108.0
BYD1_k127_3829203_0 MreB/Mbl protein K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006522 448.0
BYD1_k127_3829203_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 358.0
BYD1_k127_3829203_2 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000001112 236.0
BYD1_k127_3829203_3 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.000000000000000000000000000000000000000000000000000004802 203.0
BYD1_k127_3829203_4 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067,K01790,K19997 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008831,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016491,GO:0016614,GO:0016616,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0045226,GO:0046379,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 1.1.1.133,5.1.3.13,5.1.3.26 0.00000000000000000000000002606 112.0
BYD1_k127_3829203_5 rod shape-determining protein MreC K03570 - - 0.000000000000000001569 97.0
BYD1_k127_3854997_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 403.0
BYD1_k127_3854997_1 Penicillin-binding protein 2 K05515 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 367.0
BYD1_k127_3854997_10 Uncharacterized protein conserved in bacteria (DUF2344) - - - 0.0000000000000002812 93.0
BYD1_k127_3854997_11 PFAM heat shock protein DnaJ domain protein - - - 0.00000000004956 76.0
BYD1_k127_3854997_12 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0008150,GO:0008360,GO:0016020,GO:0016021,GO:0022603,GO:0022604,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050793,GO:0050794,GO:0051128,GO:0065007,GO:0065008,GO:0071944 - 0.00001606 54.0
BYD1_k127_3854997_2 Belongs to the N(4) N(6)-methyltransferase family K00571,K07319 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 347.0
BYD1_k127_3854997_3 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007528 298.0
BYD1_k127_3854997_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000165 274.0
BYD1_k127_3854997_5 Belongs to the ParB family K03497 - - 0.000000000000000000000000000000000000000000000000000000000000004676 238.0
BYD1_k127_3854997_6 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000003976 192.0
BYD1_k127_3854997_7 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000001318 115.0
BYD1_k127_3854997_8 Binds the 23S rRNA K02909 - - 0.000000000000000000000007088 108.0
BYD1_k127_3854997_9 Ribosomal L27 protein K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000003681 98.0
BYD1_k127_3864940_0 PFAM UDP-glucose GDP-mannose dehydrogenase K02472 - 1.1.1.336 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 382.0
BYD1_k127_3864940_1 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 371.0
BYD1_k127_3864940_2 UDP-N-acetylglucosamine 2-epimerase K13019 - 5.1.3.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008026 314.0
BYD1_k127_3864940_3 PFAM oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009705 253.0
BYD1_k127_3864940_4 PFAM transferase hexapeptide repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000008287 220.0
BYD1_k127_3864940_5 Protein of unknown function (DUF3048) C-terminal domain - - - 0.0000000000000000000000000000000000000000006442 181.0
BYD1_k127_3864940_6 Catalyzes the transfer of a N-acetyl-glucosamine moiety to 1D-myo-inositol 3-phosphate to produce 1D-myo-inositol 2- acetamido-2-deoxy-glucopyranoside 3-phosphate in the mycothiol biosynthesis pathway K15521 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009987,GO:0010125,GO:0010126,GO:0016137,GO:0016138,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044249,GO:0044272,GO:0044424,GO:0044444,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659 2.4.1.250 0.000000000000000001634 94.0
BYD1_k127_3864940_7 Glycosyl transferase 4-like - - - 0.00006121 55.0
BYD1_k127_3864940_8 - - - - 0.0005457 50.0
BYD1_k127_3913250_0 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 394.0
BYD1_k127_3913250_1 ACT domain protein - - - 0.000001012 55.0
BYD1_k127_3913250_2 response regulator K07689 - - 0.000005493 53.0
BYD1_k127_3936075_0 peptidase U62, modulator of DNA gyrase K03568 - - 1.011e-212 680.0
BYD1_k127_3936075_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002029 461.0
BYD1_k127_3936075_2 peptidase U62, modulator of DNA gyrase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 390.0
BYD1_k127_3936075_3 PFAM Haloacid dehalogenase domain protein hydrolase K01560,K07025 - 3.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000001487 243.0
BYD1_k127_3936075_4 - - - - 0.0004004 53.0
BYD1_k127_394218_0 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001668 309.0
BYD1_k127_394218_1 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000002149 249.0
BYD1_k127_394218_2 Trypsin-like serine protease - - - 0.000000000000000000000000000000000000000000000000007111 200.0
BYD1_k127_394218_3 Endoribonuclease L-PSP - - - 0.000000000000000000004672 98.0
BYD1_k127_3959212_0 purine-nucleoside phosphorylase activity K00772 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 452.0
BYD1_k127_3959212_1 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003925 297.0
BYD1_k127_3959212_2 Isochorismatase family K08281 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006766,GO:0006767,GO:0006769,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008936,GO:0009820,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0017144,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0072524,GO:1901360,GO:1901564 3.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000001043 232.0
BYD1_k127_3959212_3 Inositol monophosphatase K01092 - 3.1.3.25 0.0000000000000000000000000000000003645 147.0
BYD1_k127_3959212_4 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K17228 - 1.14.14.35 0.000000000000000000000002158 115.0
BYD1_k127_398819_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 387.0
BYD1_k127_398819_2 Protein of unknown function (DUF1290) - - - 0.00000000000000000000000001201 112.0
BYD1_k127_398819_3 Uncharacterised protein family UPF0047 - GO:0005575,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 - 0.0000000000000001179 81.0
BYD1_k127_399166_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 438.0
BYD1_k127_399166_1 tRNA synthetases class I (C) catalytic domain K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000002796 207.0
BYD1_k127_399166_2 SnoaL-like domain - - - 0.0000000000000001807 85.0
BYD1_k127_3994410_0 Zinc-binding dehydrogenase K19745 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 353.0
BYD1_k127_3994410_1 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000001859 250.0
BYD1_k127_3994410_2 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000003374 191.0
BYD1_k127_3994410_3 ABC-type cobalt transport system, permease component K16925 - - 0.00000000000000000000000000000000006934 141.0
BYD1_k127_4026969_0 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004425 517.0
BYD1_k127_4026969_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058,K16843 - 1.1.1.310,1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 507.0
BYD1_k127_4026969_10 MgsA AAA+ ATPase C terminal K07478 - - 0.0000000000000000000000000000000004276 137.0
BYD1_k127_4026969_11 cyclic nucleotide binding K10914 - - 0.000000000000000000001193 104.0
BYD1_k127_4026969_12 Belongs to the phosphoglycerate mutase family K22305 - 3.1.3.3 0.000000000000000000002524 110.0
BYD1_k127_4026969_14 Transglutaminase/protease-like homologues - - - 0.00000000000000001093 91.0
BYD1_k127_4026969_15 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000004067 89.0
BYD1_k127_4026969_2 protein methyltransferase activity K11434,K15984,K20421 - 2.1.1.242,2.1.1.303,2.1.1.319 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 464.0
BYD1_k127_4026969_3 Nickel-dependent hydrogenase K00436 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005605 467.0
BYD1_k127_4026969_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00016 - 1.1.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 417.0
BYD1_k127_4026969_5 Aminotransferase class-V K00436 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 351.0
BYD1_k127_4026969_6 NADH ubiquinone oxidoreductase, 20 Kd subunit K18007 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006055 299.0
BYD1_k127_4026969_7 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000000000000000007146 225.0
BYD1_k127_4026969_8 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000001549 199.0
BYD1_k127_4026969_9 PFAM bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000001721 185.0
BYD1_k127_4047476_0 - K00127 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003163 255.0
BYD1_k127_4047476_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000008078 234.0
BYD1_k127_4047476_2 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000001477 178.0
BYD1_k127_4047476_3 MarR family - - - 0.00000000000000000000000000000000001064 141.0
BYD1_k127_4047476_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000005456 112.0
BYD1_k127_4047476_5 - - - - 0.00000000000000003943 90.0
BYD1_k127_4054664_0 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 416.0
BYD1_k127_4054664_1 Phosphatidylinositol - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003182 274.0
BYD1_k127_4054664_2 Protein of unknown function (DUF3090) - - - 0.00000000000000000000000000000000000000000000000000000263 198.0
BYD1_k127_4054664_3 - - - - 0.0000000000000000000000001719 108.0
BYD1_k127_4054664_4 3-demethylubiquinone-9 3-O-methyltransferase activity K03428 - 2.1.1.11 0.00000000000000000000001239 111.0
BYD1_k127_4054664_5 ABC-2 family transporter protein K01992 - - 0.000000000000005388 78.0
BYD1_k127_4054664_6 hyperosmotic response K04065 - - 0.00000000000001525 82.0
BYD1_k127_4054664_7 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template - - - 0.000000000272 64.0
BYD1_k127_4058594_0 homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000752 600.0
BYD1_k127_4058594_1 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 374.0
BYD1_k127_4058594_2 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 347.0
BYD1_k127_4058594_3 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000000001238 222.0
BYD1_k127_4058594_4 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.000000000000000000000000000000000000000000000000008286 203.0
BYD1_k127_4058594_5 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000008451 190.0
BYD1_k127_4058594_6 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000001594 68.0
BYD1_k127_4081598_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007185 327.0
BYD1_k127_4081598_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384,K03671 GO:0000166,GO:0001666,GO:0003674,GO:0003824,GO:0004791,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0008150,GO:0008152,GO:0009628,GO:0009636,GO:0009987,GO:0015035,GO:0015036,GO:0016209,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0036094,GO:0036293,GO:0040007,GO:0042221,GO:0042592,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045454,GO:0048037,GO:0050660,GO:0050661,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070402,GO:0070482,GO:0070887,GO:0097159,GO:0097237,GO:0098754,GO:0098869,GO:1901265,GO:1901363,GO:1990748 1.8.1.9 0.0000000000000000000000000000000000000000005005 164.0
BYD1_k127_4081598_2 PFAM Conserved TM helix repeat-containing protein - - - 0.00000000000000000000000000000000000009326 154.0
BYD1_k127_4092226_0 Amidase K01426 - 3.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000002409 242.0
BYD1_k127_4092226_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000003571 209.0
BYD1_k127_4092226_2 helix_turn_helix, Lux Regulon - - - 0.000000000289 74.0
BYD1_k127_4104676_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 1153.0
BYD1_k127_4104676_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006317 319.0
BYD1_k127_4104676_2 TatD related DNase K03424 GO:0003674,GO:0003824,GO:0004518,GO:0004536,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000003161 172.0
BYD1_k127_4104676_3 Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.000000000002818 69.0
BYD1_k127_4104676_4 glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00001088 55.0
BYD1_k127_412209_0 Belongs to the glycosyl hydrolase 13 family - - - 1.707e-304 954.0
BYD1_k127_4189730_0 CoA-transferase family III K18702 - 2.8.3.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 398.0
BYD1_k127_4189730_1 Domain of unknown function (DUF4162) K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000191 254.0
BYD1_k127_4189730_2 N-acetylglucosaminylinositol deacetylase activity K18455 - 3.5.1.115 0.000000000000000000000000000000000000000000000000000000000000003358 223.0
BYD1_k127_4189730_3 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000164 156.0
BYD1_k127_4189730_4 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000000007464 112.0
BYD1_k127_4189730_5 Psort location CytoplasmicMembrane, score K01992 - - 0.0000000000000000000000157 115.0
BYD1_k127_4189730_6 Negative regulatory protein yxlE - - - 0.0000000007278 64.0
BYD1_k127_4194339_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.00000000000000000002154 104.0
BYD1_k127_4224005_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000007818 200.0
BYD1_k127_4224005_1 YGGT family K02221 - - 0.0000000000001351 73.0
BYD1_k127_4224005_2 DUF167 K09131 - - 0.000000003931 61.0
BYD1_k127_4261626_0 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003459 312.0
BYD1_k127_4261626_1 belongs to the sigma-70 factor family, ECF subfamily K03088 - - 0.0000000000004377 75.0
BYD1_k127_4267935_0 Belongs to the aldehyde dehydrogenase family K22187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 487.0
BYD1_k127_4267935_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000000000000000000000000000000000000000000000000000000000002299 256.0
BYD1_k127_4293827_0 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006876 449.0
BYD1_k127_4293827_1 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004246 351.0
BYD1_k127_4293827_2 Beta-eliminating lyase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 334.0
BYD1_k127_4293827_3 Branched-chain amino acid transport system / permease component K02057,K10440,K17209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001292 302.0
BYD1_k127_4293827_4 Capsule synthesis protein, CapA K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007795 276.0
BYD1_k127_4293827_5 SIS domain K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000008549 231.0
BYD1_k127_4293827_6 PFAM periplasmic binding protein K10439 - - 0.00000000000000000000000000000000000000000000000000000000002499 220.0
BYD1_k127_4293827_7 purine nucleotide biosynthetic process K02529 - - 0.00000000000000000000000000000000000000000000000004032 193.0
BYD1_k127_4293827_8 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000009072 93.0
BYD1_k127_4324143_0 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000002197 158.0
BYD1_k127_4324143_1 Glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000001271 139.0
BYD1_k127_4324143_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000001128 70.0
BYD1_k127_4324143_3 Acetyltransferase (GNAT) family - - - 0.00000000004639 74.0
BYD1_k127_4326489_0 7TM-HD extracellular K07037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 387.0
BYD1_k127_4326489_1 Aspartyl-tRNA amidotransferase K09117 - - 0.0000000000000000000000000000000005435 137.0
BYD1_k127_4326489_2 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000001634 94.0
BYD1_k127_4326489_3 Ribosomal protein S21 K02970 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000008231 84.0
BYD1_k127_4326489_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.000002974 56.0
BYD1_k127_4345437_0 serine threonine protein kinase - - - 0.0000000000000000000000000004542 120.0
BYD1_k127_4345437_1 Protein of unknown function (DUF664) - - - 0.0000000000000000002832 89.0
BYD1_k127_4345437_2 Major Facilitator Superfamily - - - 0.000000000000000006077 97.0
BYD1_k127_4381245_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 439.0
BYD1_k127_4381245_1 FAD binding domain K14672,K15972 - 1.14.13.200 0.00000000000000000000000000000000000000000000000000000000000000000008016 244.0
BYD1_k127_4381245_2 family transcriptional regulator K13652 - - 0.000000000000000000001975 100.0
BYD1_k127_4410345_0 TIGRFAM cysteine desulfurase family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 379.0
BYD1_k127_4410345_1 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000005882 193.0
BYD1_k127_4410345_2 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000003679 160.0
BYD1_k127_4410345_3 PFAM regulatory protein, MarR - - - 0.000000000000000000000000000000000001444 147.0
BYD1_k127_4410345_4 Cupin domain - - - 0.000000000000000000000000000000004827 130.0
BYD1_k127_4414707_0 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 396.0
BYD1_k127_4414707_1 Acetolactate synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003861 404.0
BYD1_k127_4414707_2 N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001494 271.0
BYD1_k127_4414707_3 HAD-hyrolase-like K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000002416 242.0
BYD1_k127_4414707_4 Belongs to the UPF0234 family K09767 - - 0.0000000000000000000000000000000000000000000000001731 182.0
BYD1_k127_4414707_5 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000002508 78.0
BYD1_k127_4414707_7 YCII-related domain K09780 - - 0.00001302 55.0
BYD1_k127_4414707_8 SnoaL-like domain - - - 0.0004737 49.0
BYD1_k127_4414707_9 protein phosphatase 2C domain protein - - - 0.0005553 49.0
BYD1_k127_4418617_0 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003597 243.0
BYD1_k127_4418617_1 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000004517 188.0
BYD1_k127_4418617_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000001575 144.0
BYD1_k127_4418617_3 Sigma-70, region 4 K03088 - - 0.000000000000000000007682 100.0
BYD1_k127_4418617_4 - - - - 0.000000000002557 74.0
BYD1_k127_4426237_0 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 413.0
BYD1_k127_4426237_1 Alginate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001343 300.0
BYD1_k127_4426237_2 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000001634 224.0
BYD1_k127_4426237_3 alginic acid biosynthetic process K12287 - - 0.00000000003008 77.0
BYD1_k127_4426237_4 CoA-binding domain protein K09181 - - 0.00003698 56.0
BYD1_k127_4431455_0 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000001586 194.0
BYD1_k127_4431455_1 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000009847 128.0
BYD1_k127_4435749_0 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.00000000000000000000000000000000000000676 157.0
BYD1_k127_4435749_1 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000597 118.0
BYD1_k127_4452875_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 299.0
BYD1_k127_4452875_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000003888 255.0
BYD1_k127_4452875_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000006882 208.0
BYD1_k127_4452875_3 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000001272 126.0
BYD1_k127_4452875_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000001058 75.0
BYD1_k127_4456051_0 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 342.0
BYD1_k127_4456051_1 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003745 278.0
BYD1_k127_4456051_2 PFAM regulatory protein TetR - - - 0.0000000000000000000000000000000000000000000000000000001858 201.0
BYD1_k127_4456051_3 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.0000000000000000000000000000000000000000000000003403 176.0
BYD1_k127_4456051_4 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000346 194.0
BYD1_k127_4456051_5 EamA-like transporter family - - - 0.0000000000368 74.0
BYD1_k127_4456051_7 indigoidine synthase a-like protein K16329,K16330 GO:0001522,GO:0003674,GO:0003824,GO:0004730,GO:0006139,GO:0006213,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009116,GO:0009451,GO:0009987,GO:0016070,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016835,GO:0016836,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050225,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:1901135,GO:1901360,GO:1901564,GO:1901657 2.7.1.83,4.2.1.70 0.00009106 46.0
BYD1_k127_4479890_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 338.0
BYD1_k127_4479890_1 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000001235 89.0
BYD1_k127_4500836_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 6.605e-245 766.0
BYD1_k127_4500836_1 oxaloacetate decarboxylase activity K01572 - 4.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 529.0
BYD1_k127_4500836_2 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 435.0
BYD1_k127_4500836_3 PFAM Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000003184 158.0
BYD1_k127_4500836_4 Biotin-requiring enzyme - - - 0.000000000000000000000001068 115.0
BYD1_k127_4500836_5 sodium ion export across plasma membrane K01573 GO:0003674,GO:0003824,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0008150,GO:0008948,GO:0015672,GO:0016829,GO:0016830,GO:0016831,GO:0030001,GO:0051179,GO:0051234 4.1.1.3 0.00000000000000000000001502 106.0
BYD1_k127_4500836_6 COGs COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.000000000000000004361 85.0
BYD1_k127_4502682_0 Aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 7.137e-243 769.0
BYD1_k127_4502682_1 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000005926 239.0
BYD1_k127_4502682_2 carbon dioxide binding K04653 - - 0.0000004698 52.0
BYD1_k127_4502682_3 F420H(2)-dependent quinone reductase - - - 0.0007219 50.0
BYD1_k127_4506755_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000004 237.0
BYD1_k127_4506755_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000004076 209.0
BYD1_k127_4506755_2 PFAM Rhomboid family protein K19225 - 3.4.21.105 0.000000000000000000000006038 113.0
BYD1_k127_4516569_0 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003738 448.0
BYD1_k127_4516569_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 380.0
BYD1_k127_4516569_10 RibD C-terminal domain - - - 0.0000000000000001538 80.0
BYD1_k127_4516569_2 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002507 265.0
BYD1_k127_4516569_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007741 244.0
BYD1_k127_4516569_4 B3/4 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000003163 239.0
BYD1_k127_4516569_5 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000001591 172.0
BYD1_k127_4516569_7 glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.000000000000000000000000000000001853 134.0
BYD1_k127_4516569_8 PFAM Peptidase family M23 - - - 0.000000000000000000000000009675 115.0
BYD1_k127_4516569_9 Pfam:DUF385 - - - 0.0000000000000000001592 94.0
BYD1_k127_4519122_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002631 250.0
BYD1_k127_4519122_1 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000001138 239.0
BYD1_k127_4519122_2 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000007339 200.0
BYD1_k127_4519122_3 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000000000000001275 180.0
BYD1_k127_4519122_4 pfam abc K01990 - - 0.0000000000000000000006427 98.0
BYD1_k127_4519122_5 Belongs to the sigma-70 factor family K03088 - - 0.000000000000000000001224 104.0
BYD1_k127_4519122_6 - - - - 0.00000000000000000001393 97.0
BYD1_k127_4519122_7 Peptidase s1 and s6 chymotrypsin hap K18544,K18545 - 3.4.21.80,3.4.21.81 0.00005017 54.0
BYD1_k127_4528265_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 1.585e-287 898.0
BYD1_k127_4528265_1 Belongs to the glycosyl hydrolase family 6 K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008769 503.0
BYD1_k127_4528265_2 helix_turn _helix lactose operon repressor K02529 - - 0.00002533 48.0
BYD1_k127_4532601_0 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000006151 222.0
BYD1_k127_4532601_1 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000004252 204.0
BYD1_k127_4532601_2 PFAM O-antigen polymerase - - - 0.0000000000000000000000000000000000000000005756 177.0
BYD1_k127_4542776_0 DEAD DEAH box helicase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 536.0
BYD1_k127_4542776_1 Molecular chaperone - - - 0.00000002698 66.0
BYD1_k127_4548594_0 PFAM Prolyl oligopeptidase family - - - 1.369e-202 654.0
BYD1_k127_4548594_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 554.0
BYD1_k127_4548594_2 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 461.0
BYD1_k127_4548594_3 Sodium/hydrogen exchanger family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004617 434.0
BYD1_k127_4548594_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000009773 180.0
BYD1_k127_4548594_5 D-glucuronyl C5-epimerase C-terminus - - - 0.000000000000000000000000000000000000000002981 178.0
BYD1_k127_4548594_6 acetyltransferase - - - 0.00000000000000000000002644 115.0
BYD1_k127_4550140_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000005723 215.0
BYD1_k127_4550140_2 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000002482 137.0
BYD1_k127_4550140_3 competence protein - - - 0.00000000000000000000000000000002413 138.0
BYD1_k127_4550140_4 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00790 - 2.5.1.7 0.0001157 47.0
BYD1_k127_4629659_0 transferase activity, transferring glycosyl groups K09118,K13693,K21349 - 2.4.1.266,2.4.1.268 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008209 471.0
BYD1_k127_4629659_1 Glycosyl transferase, family 2 K21349 - 2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003542 387.0
BYD1_k127_4629659_2 dna ligase - - - 0.00002902 50.0
BYD1_k127_46543_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 402.0
BYD1_k127_4663120_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.000000000000000000000000000000000000000000006773 190.0
BYD1_k127_4663120_1 Histidine kinase K11617 - 2.7.13.3 0.0000000000000000000000009556 124.0
BYD1_k127_4663120_2 ABC transporter, ATP-binding protein K01990 - - 0.00000000000000000003176 94.0
BYD1_k127_4663120_3 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000000000004374 74.0
BYD1_k127_4663120_4 GAF domain - - - 0.0000000000213 79.0
BYD1_k127_4663120_5 transcriptional regulator - - - 0.0000000000213 79.0
BYD1_k127_4663120_6 - - - - 0.000000001759 66.0
BYD1_k127_4667080_0 PFAM Uncharacterised protein family (UPF0182) K09118 - - 0.0004888 47.0
BYD1_k127_4673333_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001354 454.0
BYD1_k127_4673333_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 351.0
BYD1_k127_4673333_2 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003512 327.0
BYD1_k127_4673333_3 iron ion homeostasis K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 282.0
BYD1_k127_4673333_4 RNHCP domain - - - 0.000000000000000000000000000000000000000000000000000005546 191.0
BYD1_k127_4683962_0 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 393.0
BYD1_k127_4683962_1 LeuA allosteric (dimerisation) domain K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001504 283.0
BYD1_k127_4683962_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.000002317 53.0
BYD1_k127_4712474_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 6.914e-226 711.0
BYD1_k127_4712474_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 533.0
BYD1_k127_4712474_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000006199 173.0
BYD1_k127_4712474_3 Family of unknown function (DUF5317) - - - 0.0006514 49.0
BYD1_k127_4714215_0 UDP-glucoronosyl and UDP-glucosyl transferase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008194,GO:0008610,GO:0009058,GO:0009247,GO:0009605,GO:0009607,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0020012,GO:0030682,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044403,GO:0044413,GO:0044415,GO:0044419,GO:0044424,GO:0044464,GO:0046467,GO:0050896,GO:0051701,GO:0051704,GO:0051707,GO:0051805,GO:0051807,GO:0051832,GO:0051834,GO:0052173,GO:0052200,GO:0052564,GO:0052572,GO:0071704,GO:0071944,GO:0075136,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 1.542e-203 643.0
BYD1_k127_4714215_1 Belongs to the thiolase family K00626,K02615 - 2.3.1.174,2.3.1.223,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 543.0
BYD1_k127_4714215_10 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000001114 151.0
BYD1_k127_4714215_11 PFAM peptidase S16 lon domain protein K01338,K07157 - 3.4.21.53 0.00000000000000000000000000000000000002402 155.0
BYD1_k127_4714215_12 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000004427 130.0
BYD1_k127_4714215_13 Protein of unknown function (DUF3037) - - - 0.00000000000009588 72.0
BYD1_k127_4714215_14 phenylacetate-CoA oxygenase K02610 - - 0.0000000009924 64.0
BYD1_k127_4714215_2 TIGRFAM phenylacetate-CoA oxygenase, PaaG subunit K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 437.0
BYD1_k127_4714215_3 sugar isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 367.0
BYD1_k127_4714215_4 Serine threonine protein kinase involved in cell cycle control - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004279 293.0
BYD1_k127_4714215_5 Extradiol ring-cleavage dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002109 263.0
BYD1_k127_4714215_6 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000001111 259.0
BYD1_k127_4714215_7 Aminoglycoside phosphotransferase K16146 - 2.7.1.175 0.0000000000000000000000000000000000000000000000000000000000002819 227.0
BYD1_k127_4714215_8 PFAM phenylacetic acid catabolic family protein K02611 - 1.14.13.149 0.0000000000000000000000000000000000000000000000000004735 198.0
BYD1_k127_4714215_9 Iron-sulfur cluster assembly protein K02612 - - 0.0000000000000000000000000000000000000000008095 173.0
BYD1_k127_4727453_0 Belongs to the GcvT family - - - 3.221e-267 841.0
BYD1_k127_4771743_0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term K17108 - 3.2.1.45 0.000000000000000000000000001119 113.0
BYD1_k127_4771743_1 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000553 110.0
BYD1_k127_4771743_2 - - - - 0.00000000000009157 77.0
BYD1_k127_4862005_0 TIGRFAM dihydroxyacetone kinase, DhaK subunit K05878 - 2.7.1.121 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 476.0
BYD1_k127_4862005_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 344.0
BYD1_k127_4862005_2 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004931 322.0
BYD1_k127_4862005_3 Dihydroxyacetone kinase K05879 - 2.7.1.121 0.00000000000000000000000000000000000000000000000001749 189.0
BYD1_k127_4862005_4 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000001356 175.0
BYD1_k127_4862005_5 dihydroxyacetone kinase, phosphotransfer subunit K05881 - 2.7.1.121 0.000000000000000000000001495 110.0
BYD1_k127_4862005_6 DoxX K16937 - 1.8.5.2 0.000000000000000000000001549 110.0
BYD1_k127_4862005_7 PFAM PTS HPr component phosphorylation site K11189 - - 0.00000000000001725 80.0
BYD1_k127_4862005_8 - K03649 - 3.2.2.28 0.0000000000003188 78.0
BYD1_k127_4870571_0 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 421.0
BYD1_k127_4870571_1 DsrE/DsrF/DrsH-like family - - - 0.00000000000000000000000000000000000000000000000001994 185.0
BYD1_k127_4870571_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000003476 187.0
BYD1_k127_4870571_3 protein complex oligomerization - GO:0001539,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006928,GO:0006950,GO:0006974,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0019897,GO:0019898,GO:0031234,GO:0033554,GO:0040011,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051716,GO:0071944,GO:0071973,GO:0071978,GO:0097588,GO:0098552,GO:0098562 - 0.000000000000000000000000000009311 125.0
BYD1_k127_4870571_4 Belongs to the sulfur carrier protein TusA family - - - 0.00000000000000000001554 95.0
BYD1_k127_4890447_0 Belongs to the glycosyl hydrolase family 6 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000463 366.0
BYD1_k127_4890447_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000002838 225.0
BYD1_k127_4890447_2 SMART Rhodanese domain protein - - - 0.00000000000000000000000000000007025 129.0
BYD1_k127_4890447_5 PFAM sigma-70 region 2 domain protein K03088 - - 0.00000000252 61.0
BYD1_k127_4890447_6 transcriptional K22299 - - 0.0000003711 57.0
BYD1_k127_4890447_7 - - - - 0.000002163 57.0
BYD1_k127_4920667_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 4.832e-222 709.0
BYD1_k127_4920667_1 permease K06901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 411.0
BYD1_k127_4920667_2 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 307.0
BYD1_k127_4920667_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K01598,K13038 - 4.1.1.36,6.3.2.5 0.0000000000000000000000000000000000000000000000000000000000008594 228.0
BYD1_k127_4920667_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.0000000000000000000000000000000000000000000000000000008844 202.0
BYD1_k127_4920667_5 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000006022 194.0
BYD1_k127_4920667_6 signal peptide processing K03100 - 3.4.21.89 0.0000000000000000000000000000001528 134.0
BYD1_k127_4920667_7 - - - - 0.0000001875 59.0
BYD1_k127_4920667_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.0000004451 63.0
BYD1_k127_4930017_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003338 346.0
BYD1_k127_4930017_1 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 326.0
BYD1_k127_4930017_2 PFAM AMP-dependent synthetase and ligase - - - 0.0000000000000000000000000000000000000000000000000000197 215.0
BYD1_k127_4930017_3 nuclear chromosome segregation - - - 0.0000000000000000000000000000000000007688 162.0
BYD1_k127_4930017_4 ABC-2 family transporter protein - - - 0.00000000000000000000000000002565 131.0
BYD1_k127_4930017_5 Protein of unknown function (DUF1015) - - - 0.0000000000000000000000004274 112.0
BYD1_k127_4974667_0 PFAM ABC transporter related K10112 GO:0003674,GO:0003824,GO:0005215,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015169,GO:0015399,GO:0015405,GO:0015430,GO:0015605,GO:0015711,GO:0015748,GO:0015794,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0034220,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0098656,GO:1901264,GO:1901505 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 426.0
BYD1_k127_4974667_1 Metal-independent alpha-mannosidase (GH125) K09704 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005133 292.0
BYD1_k127_4974667_2 transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003108 258.0
BYD1_k127_4974667_3 glycerophosphodiester transmembrane transport K02026 - - 0.00000000000000000000000000000000000000000000000008951 180.0
BYD1_k127_4974667_4 - - - - 0.0000000000000000000000000000000000000000002091 175.0
BYD1_k127_4986994_0 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 422.0
BYD1_k127_4986994_1 aminopeptidase N - - - 0.000000000000000000000000000000000000000000000000000000000000000006317 259.0
BYD1_k127_4986994_2 aminopeptidase N - - - 0.000000000000000000000000000000000597 151.0
BYD1_k127_4986994_3 Tetratricopeptide repeat - - - 0.000000000001928 79.0
BYD1_k127_5013924_0 Amidohydrolase family K06015 - 3.5.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 343.0
BYD1_k127_5013924_1 aldehyde oxidase and xanthine dehydrogenase a b hammerhead - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007948 274.0
BYD1_k127_5013924_2 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0005807 50.0
BYD1_k127_5027250_0 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases K15510 - 1.1.98.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 463.0
BYD1_k127_5027250_1 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 381.0
BYD1_k127_5027250_10 PFAM Pyridoxal-dependent decarboxylase - - - 0.00000000000000001696 88.0
BYD1_k127_5027250_2 PFAM aspartate ornithine carbamoyltransferase, Asp Orn-binding region K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 352.0
BYD1_k127_5027250_3 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 351.0
BYD1_k127_5027250_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001054 278.0
BYD1_k127_5027250_5 Regulates the transcription of the pyrimidine nucleotide (pyr) operon in response to exogenous pyrimidines K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000001013 235.0
BYD1_k127_5027250_6 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0016740,GO:0016746,GO:0016747,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0033819,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000008094 175.0
BYD1_k127_5027250_7 TIGRFAM galactose-1-phosphate uridylyltransferase K00965 - 2.7.7.12 0.000000000000000000000000000000000000000001094 178.0
BYD1_k127_5027250_8 peptidase - - - 0.00000000000000000000000000000000004139 154.0
BYD1_k127_5027250_9 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000001727 94.0
BYD1_k127_5096446_0 FAD linked oxidases, C-terminal domain K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000008799 275.0
BYD1_k127_5096446_1 Peptidase family M1 domain - - - 0.0000000000000000000000000007041 129.0
BYD1_k127_512000_0 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0040007,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 454.0
BYD1_k127_5148056_0 FAD binding domain K14672,K15972 - 1.14.13.200 0.000000000000000000000000000000000000000000000000000002669 211.0
BYD1_k127_5148056_1 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000006442 150.0
BYD1_k127_5148056_2 Histidine kinase - - - 0.00000000000000000000000001599 124.0
BYD1_k127_5185202_0 aminotransferase class I and II K00812,K10907,K14260,K14267 - 2.6.1.1,2.6.1.17,2.6.1.2,2.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 507.0
BYD1_k127_5185202_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 516.0
BYD1_k127_5185202_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007611 304.0
BYD1_k127_5185202_3 Domain of unknown function (DUF4872) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 310.0
BYD1_k127_5185202_4 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000009399 209.0
BYD1_k127_5185202_5 LysE type translocator - - - 0.000000000000000000000000000000000687 139.0
BYD1_k127_5185202_6 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000005193 97.0
BYD1_k127_5185202_7 Protein of unknown function (DUF3307) - - - 0.0000000000003339 82.0
BYD1_k127_5185202_8 cyclic nucleotide binding K10914 - - 0.00000000006646 76.0
BYD1_k127_5185202_9 glyoxalase III activity - - - 0.000000004748 63.0
BYD1_k127_5199700_0 Pterin binding enzyme K00796 - 2.5.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 296.0
BYD1_k127_5199700_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000005935 152.0
BYD1_k127_5199700_2 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000288 113.0
BYD1_k127_5201939_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1152.0
BYD1_k127_5201939_1 ATPase P-type (Transporting), HAD superfamily, subfamily IC - - - 0.0 1058.0
BYD1_k127_5201939_10 ABC transporter substrate-binding protein K02035 - - 0.00000000000000000000000000000000000000000000000000001348 212.0
BYD1_k127_5201939_11 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000004265 182.0
BYD1_k127_5201939_12 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000002257 166.0
BYD1_k127_5201939_13 Rossmann-like domain - - - 0.0000000000000000000000000000000000007733 157.0
BYD1_k127_5201939_14 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000000000004545 142.0
BYD1_k127_5201939_15 Belongs to the Nudix hydrolase family - - - 0.00000000000000000000000001727 119.0
BYD1_k127_5201939_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009121 602.0
BYD1_k127_5201939_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 504.0
BYD1_k127_5201939_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 413.0
BYD1_k127_5201939_5 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006516 411.0
BYD1_k127_5201939_6 Belongs to the ABC transporter superfamily K02031,K02032,K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000576 394.0
BYD1_k127_5201939_7 PFAM ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 316.0
BYD1_k127_5201939_8 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001621 266.0
BYD1_k127_5201939_9 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000001583 244.0
BYD1_k127_522955_0 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 2.315e-217 684.0
BYD1_k127_522955_1 Binding-protein-dependent transport system inner membrane component K02001 - - 2.246e-198 638.0
BYD1_k127_522955_2 glycine betaine K02000 - 3.6.3.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 492.0
BYD1_k127_522955_3 Bacterial extracellular solute-binding protein K02055 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 482.0
BYD1_k127_522955_4 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000838 472.0
BYD1_k127_522955_5 Substrate binding domain of ABC-type glycine betaine transport system K02002 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 404.0
BYD1_k127_522955_6 PFAM binding-protein-dependent transport systems inner membrane component K02054 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 368.0
BYD1_k127_522955_7 PFAM binding-protein-dependent transport systems inner membrane component K02053 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009722 285.0
BYD1_k127_522955_8 Haloacid dehalogenase-like hydrolase - - - 0.0001677 48.0
BYD1_k127_5239956_0 Dihydropyrimidinase K01464 - 3.5.2.2 5.452e-194 615.0
BYD1_k127_5239956_1 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000000000000005922 185.0
BYD1_k127_5239956_2 Stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000000000000000000000004869 177.0
BYD1_k127_5239956_3 Memo-like protein - - - 0.000000000000000000000000000000000001314 144.0
BYD1_k127_5239956_4 domain protein - - - 0.00000000000000000001346 105.0
BYD1_k127_5239956_5 Histidine kinase-like ATPase domain - - - 0.00000000000000762 89.0
BYD1_k127_5239956_6 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000009595 64.0
BYD1_k127_5303212_0 PFAM Helicase conserved C-terminal domain K06877 - - 4.743e-257 814.0
BYD1_k127_5303212_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 351.0
BYD1_k127_5303212_2 Flotillin K07192 - - 0.00000000000000000000000000000000000000000000000000000000000000000000847 259.0
BYD1_k127_5303212_3 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000008559 148.0
BYD1_k127_5303212_4 - - - - 0.000000006457 64.0
BYD1_k127_5303212_5 E1-E2 ATPase - - - 0.00002035 53.0
BYD1_k127_5323265_0 Glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000411 158.0
BYD1_k127_5377364_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 442.0
BYD1_k127_5383257_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003665 300.0
BYD1_k127_5383257_1 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000000000000000000000009668 244.0
BYD1_k127_5383257_2 WYL domain K07012,K13572 - - 0.00000000000000000000000000000000000000000000000000000000000000000003555 243.0
BYD1_k127_5383257_3 Bacterial periplasmic substrate-binding proteins K02030,K02424,K17073 - - 0.00000000000000000000000000000000001099 143.0
BYD1_k127_5383257_4 PFAM Peptidase family M23 - - - 0.000000000001312 75.0
BYD1_k127_5412909_0 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 399.0
BYD1_k127_5412909_1 helix_turn_helix, Lux Regulon K02282 - - 0.00000000000000000000000000000000000000003692 162.0
BYD1_k127_5412909_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07675 - 2.7.13.3 0.00000000000000000000000000000004946 139.0
BYD1_k127_5412909_3 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000007386 139.0
BYD1_k127_5423266_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 3.522e-200 640.0
BYD1_k127_5423266_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008426 476.0
BYD1_k127_5423266_10 Binding-protein-dependent transport system inner membrane component K10007 - - 0.000000000000000000000000000000000009335 156.0
BYD1_k127_5423266_11 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase K01057 - 3.1.1.31 0.00000000000000000000000000000000002256 151.0
BYD1_k127_5423266_12 Glucose-6-phosphate dehydrogenase subunit - - - 0.000000000000000000000000000123 131.0
BYD1_k127_5423266_13 helix_turn_helix, Lux Regulon - - - 0.00000000000002971 82.0
BYD1_k127_5423266_14 TIGRFAM 6-phosphogluconate dehydrogenase, decarboxylating K00033 - 1.1.1.343,1.1.1.44 0.000000008071 56.0
BYD1_k127_5423266_15 Transglycosylase associated protein - - - 0.0002404 51.0
BYD1_k127_5423266_2 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009543 429.0
BYD1_k127_5423266_3 L-lysine 6-monooxygenase (NADPH-requiring) K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007989 392.0
BYD1_k127_5423266_4 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 345.0
BYD1_k127_5423266_5 PFAM ABC transporter related K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007961 335.0
BYD1_k127_5423266_6 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000002342 213.0
BYD1_k127_5423266_7 Bacterial periplasmic substrate-binding proteins K10039 - - 0.00000000000000000000000000000000000000000000000000007122 197.0
BYD1_k127_5423266_8 Pfam:DUF2029 - - - 0.000000000000000000000000000000000000002819 159.0
BYD1_k127_5423266_9 Binding-protein-dependent transport system inner membrane component K10040 GO:0003333,GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006820,GO:0006865,GO:0008150,GO:0008509,GO:0008514,GO:0015075,GO:0015171,GO:0015318,GO:0015711,GO:0015849,GO:0016020,GO:0022857,GO:0034220,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098656,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000005843 148.0
BYD1_k127_5438577_0 Lamin Tail Domain K07004 - - 4.098e-275 887.0
BYD1_k127_5438577_1 PFAM Phenylalanine and histidine ammonia-lyase K01745,K10775 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009072,GO:0009698,GO:0009699,GO:0009800,GO:0009803,GO:0009987,GO:0016043,GO:0016053,GO:0016829,GO:0016840,GO:0016841,GO:0019438,GO:0019748,GO:0019752,GO:0022607,GO:0032787,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044550,GO:0045548,GO:0046394,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 4.3.1.24,4.3.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009879 280.0
BYD1_k127_5438577_2 Belongs to the TPP enzyme family - - - 0.00000000000000000001827 108.0
BYD1_k127_5438577_3 Glyoxalase-like domain K08234 - - 0.000008122 57.0
BYD1_k127_5438577_4 acetyltransferase - - - 0.0003474 51.0
BYD1_k127_5440718_0 PFAM glycosyl transferase, family 51 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002269 291.0
BYD1_k127_5440718_1 Glycosyl Transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001925 260.0
BYD1_k127_5440718_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000006109 233.0
BYD1_k127_5440718_3 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.00000000000000002356 83.0
BYD1_k127_5463007_0 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007077 412.0
BYD1_k127_5463007_1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III K01835,K01840 - 5.4.2.2,5.4.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 411.0
BYD1_k127_5463007_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000101 263.0
BYD1_k127_5463007_3 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971 - 2.7.7.13 0.00000000000000000000000000000000000000000000000000002233 201.0
BYD1_k127_5463007_4 periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000001374 194.0
BYD1_k127_5463007_5 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000002075 143.0
BYD1_k127_5463007_6 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000002896 136.0
BYD1_k127_5463007_7 PFAM zinc finger, SWIM domain protein - - - 0.00000000000000000000000006113 109.0
BYD1_k127_5478481_0 Proton-conducting membrane transporter K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 322.0
BYD1_k127_5478481_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000003185 246.0
BYD1_k127_547951_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006081,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0016020,GO:0016829,GO:0016840,GO:0016843,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0040007,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046184,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 4.3.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 451.0
BYD1_k127_547951_1 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.00000000000000000000000000000000000000000000000000000000000000231 226.0
BYD1_k127_547951_2 regulation of RNA biosynthetic process - - - 0.0006281 49.0
BYD1_k127_5487381_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 636.0
BYD1_k127_5487381_1 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007405 619.0
BYD1_k127_5487381_2 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 471.0
BYD1_k127_5487381_3 PFAM FMN-dependent dehydrogenase K00101,K16422 - 1.1.2.3,1.1.3.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007832 293.0
BYD1_k127_5487381_4 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000046 158.0
BYD1_k127_5487381_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000001305 96.0
BYD1_k127_5488774_0 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 339.0
BYD1_k127_5488774_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001374 285.0
BYD1_k127_5488774_2 PFAM ABC transporter related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001697 267.0
BYD1_k127_5488774_3 ABC-type multidrug transport system, permease component K01992 - - 0.00000000000000000000000000000000000000000000000000004095 205.0
BYD1_k127_5493024_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 GO:0008150,GO:0040007 2.4.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 494.0
BYD1_k127_5493024_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 408.0
BYD1_k127_5493024_2 PFAM AIR synthase related protein, N-terminal domain K01933 - 6.3.3.1 0.00000000000000000000000000005398 121.0
BYD1_k127_5516573_0 Argininosuccinate lyase C-terminal K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 398.0
BYD1_k127_5525159_0 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030312,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0071944,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005464 310.0
BYD1_k127_5525159_1 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000001778 203.0
BYD1_k127_5525159_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000003584 168.0
BYD1_k127_5592910_0 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000006617 207.0
BYD1_k127_5592910_1 PFAM Metallophosphoesterase K01090 - 3.1.3.16 0.00000000000000000000000000000000009846 140.0
BYD1_k127_5592910_2 AAA domain - - - 0.00000000000000005208 94.0
BYD1_k127_5592910_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000001255 63.0
BYD1_k127_5599259_0 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001054 256.0
BYD1_k127_5599259_1 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.00000000000000000000000000000000000000000000000000000001429 211.0
BYD1_k127_5599259_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.0000000000000000000000000000000000000009973 158.0
BYD1_k127_5599259_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system - - - 0.000000000003411 72.0
BYD1_k127_5624518_0 Methionine synthase K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.00000000000000000000000000000000000001689 145.0
BYD1_k127_5624518_1 Belongs to the globin family - - - 0.0000000000000000000000000000000001213 144.0
BYD1_k127_5631814_0 tRNA synthetases class I (K) K04566 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 413.0
BYD1_k127_5631814_1 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 419.0
BYD1_k127_5646478_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008249 428.0
BYD1_k127_5646478_1 Ferrous iron transport B domain protein K04759 - - 0.00000000000000000000000000000000000000000000001018 193.0
BYD1_k127_5646478_2 iron dependent repressor K03709 - - 0.0005209 50.0
BYD1_k127_5647711_0 PFAM single-stranded nucleic acid binding R3H domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 579.0
BYD1_k127_5647711_1 metallopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000007721 201.0
BYD1_k127_5647711_2 SnoaL-like polyketide cyclase K15945 - - 0.000000000000000000000000000000000000000000000000001063 199.0
BYD1_k127_566147_0 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 496.0
BYD1_k127_566147_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008085 313.0
BYD1_k127_5668828_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 351.0
BYD1_k127_5668828_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001802 280.0
BYD1_k127_5668828_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000008742 224.0
BYD1_k127_5668828_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000004238 182.0
BYD1_k127_5668828_5 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.000000000000000000415 100.0
BYD1_k127_5668828_7 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.000001671 55.0
BYD1_k127_5729229_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 1.392e-201 644.0
BYD1_k127_5729229_1 glutamine synthetase K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 492.0
BYD1_k127_5729229_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002059 318.0
BYD1_k127_5729229_3 ResB-like family K07399 - - 0.0000000000000000000000000000000000000000000000781 191.0
BYD1_k127_5729229_4 AsnC family K03718 - - 0.0000000000000000000000000000000000000000000003144 175.0
BYD1_k127_5729229_5 Luciferase-like monooxygenase - - - 0.000000000000000000000000000000000000000009418 158.0
BYD1_k127_5729229_6 diguanylate cyclase - - - 0.00000000000000000000000000000000000005329 158.0
BYD1_k127_5729229_7 positive regulation of transcription, DNA-templated K09684 - - 0.0000000000000123 87.0
BYD1_k127_5759532_0 Uridine phosphorylase K00757 - 2.4.2.3 0.00000000000000000000000000000000000000000000000000000000000000005426 231.0
BYD1_k127_5759532_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 0.000000000000000000000000000000000000000000000000000000001294 215.0
BYD1_k127_5759532_2 ROK family K00845 - 2.7.1.2 0.0000000000000000000000000000002911 128.0
BYD1_k127_5759532_3 PFAM Endonuclease exonuclease phosphatase K07004 - - 0.00000000000001719 89.0
BYD1_k127_5759532_4 - - - - 0.0000000000000266 73.0
BYD1_k127_5799862_0 F420-dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000006132 198.0
BYD1_k127_5799862_1 Acetyltransferase (GNAT) domain K03824,K09964 - - 0.00000000000000000000000000000003707 134.0
BYD1_k127_5799862_2 Lysine methyltransferase - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010565,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019216,GO:0019217,GO:0019222,GO:0019538,GO:0031323,GO:0031324,GO:0031329,GO:0031330,GO:0031974,GO:0031998,GO:0031999,GO:0032259,GO:0036211,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043467,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045833,GO:0045922,GO:0046320,GO:0046322,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050994,GO:0050995,GO:0051341,GO:0051354,GO:0062012,GO:0062014,GO:0065007,GO:0065009,GO:0070013,GO:0071704,GO:0080090,GO:0140096,GO:1901564,GO:1904732,GO:1904733,GO:1904735,GO:1904736 - 0.0000000000000000000002835 105.0
BYD1_k127_5822594_0 Transmembrane secretion effector - - - 0.000000000000000000000000009864 126.0
BYD1_k127_5822594_1 Cyclic nucleotide-monophosphate binding domain - - - 0.00003038 57.0
BYD1_k127_5867210_0 Belongs to the binding-protein-dependent transport system permease family K10544 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0008643,GO:0015144,GO:0015145,GO:0015749,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0034219,GO:0044425,GO:0044464,GO:0051119,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 442.0
BYD1_k127_5867210_1 ABC transporter K10543 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005975,GO:0005996,GO:0006810,GO:0008150,GO:0008152,GO:0008643,GO:0015749,GO:0015750,GO:0015753,GO:0019321,GO:0030246,GO:0030288,GO:0030313,GO:0031975,GO:0034219,GO:0036094,GO:0042597,GO:0042732,GO:0044238,GO:0044281,GO:0044464,GO:0048029,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071704 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 321.0
BYD1_k127_5867210_2 ABC-type sugar transport system, ATPase component K10545 - 3.6.3.17 0.0000000000000000000005678 98.0
BYD1_k127_5879658_0 GMC oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 549.0
BYD1_k127_5879658_1 - - - - 0.0000000000000007347 91.0
BYD1_k127_5879658_2 Belongs to the aldehyde dehydrogenase family K00141 - 1.2.1.28 0.0003393 47.0
BYD1_k127_588760_0 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 - 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 500.0
BYD1_k127_588760_1 Fumarylacetoacetate hydrolase domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000006892 226.0
BYD1_k127_588760_2 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000004247 192.0
BYD1_k127_588760_3 Protein of unknown function (DUF3105) - - - 0.00000009483 63.0
BYD1_k127_5923828_0 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000259 303.0
BYD1_k127_5923828_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000001239 207.0
BYD1_k127_5923828_2 glyoxalase III activity - - - 0.0000000000000000000006427 98.0
BYD1_k127_5923828_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000003635 100.0
BYD1_k127_5934553_0 AAA ATPase domain - - - 4.207e-243 784.0
BYD1_k127_5934553_1 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.76e-233 744.0
BYD1_k127_5934553_10 PFAM Methyltransferase type 12 - - - 0.00000000000000000000000000000000000000000000003359 179.0
BYD1_k127_5934553_12 Glycosyl transferase - - - 0.000001173 61.0
BYD1_k127_5934553_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 564.0
BYD1_k127_5934553_3 epimerase dehydratase K01710,K08678,K21211 - 4.1.1.35,4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005647 456.0
BYD1_k127_5934553_4 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 429.0
BYD1_k127_5934553_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000376 387.0
BYD1_k127_5934553_6 Nucleotidyl transferase K21210 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 346.0
BYD1_k127_5934553_7 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001387 310.0
BYD1_k127_5934553_8 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
BYD1_k127_5934553_9 GDP-mannose 4,6 dehydratase K21214 - - 0.00000000000000000000000000000000000000000000000000000000000001034 238.0
BYD1_k127_5958282_0 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 454.0
BYD1_k127_5958282_1 Belongs to the peptidase M24B family K01271,K01274 - 3.4.13.9 0.0000000000000000000000000000000000000000000001289 180.0
BYD1_k127_5958282_2 Pyruvate ferredoxin oxidoreductase and related K00174 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000009185 148.0
BYD1_k127_5958282_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000002229 113.0
BYD1_k127_5979143_0 COG0438 Glycosyltransferase - - - 0.000000000000000349 90.0
BYD1_k127_5979143_1 Glycosyl transferases group 1 - - - 0.000000000005084 78.0
BYD1_k127_5979143_2 glycosyl transferase group 1 - - - 0.00000006397 65.0
BYD1_k127_600234_0 PFAM MgtC SapB transporter K07507 - - 0.00000000000000000000000000000000001618 149.0
BYD1_k127_600234_1 ECF sigma factor K03088 - - 0.000000000000000000000002991 109.0
BYD1_k127_600234_2 Cell envelope-related transcriptional attenuator domain - - - 0.000000000000000000008571 107.0
BYD1_k127_6011576_0 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000006166 207.0
BYD1_k127_6011576_1 PFAM Xylose isomerase domain protein TIM barrel K06606 - 5.3.99.11 0.000000000000000000004604 102.0
BYD1_k127_6034191_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 5.574e-288 898.0
BYD1_k127_6034191_1 helix_turn_helix gluconate operon transcriptional repressor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 323.0
BYD1_k127_6034191_2 HAD-hyrolase-like K07025 - - 0.00000000000000000000000000000000000000000000000000000000000001712 225.0
BYD1_k127_6034191_3 pilus assembly protein K02282 - - 0.000000000000000000001896 109.0
BYD1_k127_6037246_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 320.0
BYD1_k127_6102434_0 PFAM ABC transporter related K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 584.0
BYD1_k127_6102434_1 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003328 278.0
BYD1_k127_6102434_2 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000003134 248.0
BYD1_k127_6102434_3 PFAM basic membrane lipoprotein K07335 - - 0.00000000000000000000000000000000000000000000000000000004917 212.0
BYD1_k127_6102434_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000002343 204.0
BYD1_k127_6102434_5 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000008251 134.0
BYD1_k127_6102434_6 CoA-binding protein K06929 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000001315 130.0
BYD1_k127_6102434_7 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000004056 119.0
BYD1_k127_6102434_8 Zincin-like metallopeptidase - - - 0.0000000000000000000001896 100.0
BYD1_k127_611738_0 Regulatory protein, FmdB family - - - 0.00000000001525 69.0
BYD1_k127_611738_1 PFAM Ribonuclease BN-like family K07058 - - 0.00003893 56.0
BYD1_k127_6128684_0 DJ-1/PfpI family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 519.0
BYD1_k127_6128684_1 Protein involved in amylo-alpha-1,6-glucosidase activity and glycogen biosynthetic process - - - 0.000000000000000000000000000000000000000000002067 171.0
BYD1_k127_6128684_2 Redoxin - - - 0.0000000000000000000000000000000000008272 149.0
BYD1_k127_6128684_3 Multicopper oxidase - - - 0.0000000000000000008188 86.0
BYD1_k127_6201126_0 Amylo-alpha-1,6-glucosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 625.0
BYD1_k127_6237598_0 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 310.0
BYD1_k127_6237598_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000005588 234.0
BYD1_k127_6237598_2 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000002283 161.0
BYD1_k127_6237598_3 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000004102 164.0
BYD1_k127_6237598_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000002013 63.0
BYD1_k127_6237598_5 chorismate mutase - - - 0.0001758 50.0
BYD1_k127_6241685_0 Trimethylamine methyltransferase (MTTB) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 611.0
BYD1_k127_6241685_1 daunorubicin resistance ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 424.0
BYD1_k127_6241685_2 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001315 276.0
BYD1_k127_6241685_3 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000001337 202.0
BYD1_k127_6241685_4 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000001862 140.0
BYD1_k127_6241685_5 Acetyl-coenzyme A synthetase N-terminus K01895 - 6.2.1.1 0.000000000000000001691 91.0
BYD1_k127_6241685_6 HD domain - - - 0.00000003861 56.0
BYD1_k127_6264581_0 S-adenosylmethionine-dependent methyltransferase K06969 - 2.1.1.191 0.0000000000000000000000000000000000000000000000000000000000000000002329 238.0
BYD1_k127_6264581_1 SpoU rRNA Methylase family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000001773 235.0
BYD1_k127_6264581_2 Dehydrogenase K00382 - 1.8.1.4 0.000000000001909 77.0
BYD1_k127_6267943_0 PFAM permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 383.0
BYD1_k127_6267943_1 - - - - 0.000000000000001017 84.0
BYD1_k127_6267943_2 redox-active disulfide protein 2 - - - 0.000003781 49.0
BYD1_k127_6267943_3 DNA-binding transcription factor activity K03892 - - 0.00001226 51.0
BYD1_k127_6270959_0 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 462.0
BYD1_k127_6270959_1 Insulinase (Peptidase family M16) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 352.0
BYD1_k127_6270959_2 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000002781 179.0
BYD1_k127_6270959_3 ArsR family transcriptional regulator - - - 0.000000000000000000000000000005699 132.0
BYD1_k127_6298214_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 2.006e-217 693.0
BYD1_k127_6298214_1 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 480.0
BYD1_k127_6298214_2 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 323.0
BYD1_k127_6298214_3 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 335.0
BYD1_k127_6316033_0 BFD domain protein 2Fe-2S -binding domain protein K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 488.0
BYD1_k127_6316033_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000308 237.0
BYD1_k127_631760_0 Isocitrate lyase K01637 GO:0003674,GO:0003824,GO:0004451,GO:0005975,GO:0006081,GO:0006082,GO:0006097,GO:0006102,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0046421,GO:0046487,GO:0071704,GO:0072350 4.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002985 580.0
BYD1_k127_631760_1 redox-active disulfide protein 2 - - - 0.00000000000000001008 88.0
BYD1_k127_631760_2 Predicted permease K07089 - - 0.0000000000000009367 78.0
BYD1_k127_6323932_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 439.0
BYD1_k127_6323932_1 Predicted membrane protein (DUF2254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 316.0
BYD1_k127_6323932_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002897 316.0
BYD1_k127_632832_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 377.0
BYD1_k127_632832_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 345.0
BYD1_k127_632832_10 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000002165 146.0
BYD1_k127_632832_11 PFAM peptidase M50 - - - 0.00000000000000000000000000000003344 134.0
BYD1_k127_632832_12 PFAM membrane-flanked domain - - - 0.00000000000000000000000000008819 131.0
BYD1_k127_632832_13 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000009862 103.0
BYD1_k127_632832_2 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000006665 257.0
BYD1_k127_632832_3 Belongs to the 'phage' integrase family. XerC subfamily K04763 GO:0008150,GO:0040007 - 0.000000000000000000000000000000000000000000000000000000000000000000000001341 272.0
BYD1_k127_632832_4 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000003598 199.0
BYD1_k127_632832_5 RNA pseudouridylate synthase K06178,K06183 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.19,5.4.99.22 0.000000000000000000000000000000000000000000000000002285 193.0
BYD1_k127_632832_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000002922 189.0
BYD1_k127_632832_7 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000004857 179.0
BYD1_k127_632832_8 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000003393 158.0
BYD1_k127_632832_9 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000009934 138.0
BYD1_k127_6355766_0 Xaa-Pro aminopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 528.0
BYD1_k127_6355766_1 ASPIC and UnbV - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 440.0
BYD1_k127_6355766_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009541 288.0
BYD1_k127_6355766_3 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002395 261.0
BYD1_k127_6355766_4 ABC-type multidrug transport system ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000005833 247.0
BYD1_k127_6355766_5 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000009994 246.0
BYD1_k127_6355766_6 PFAM oxidoreductase domain protein - - - 0.000000000000000000000000000000000000000000000002805 178.0
BYD1_k127_6355766_7 ASPIC and UnbV - - - 0.000000000000000000000000000000000000003917 151.0
BYD1_k127_6355766_8 - K01992 - - 0.0003067 53.0
BYD1_k127_6363852_0 Succinyl-CoA ligase like flavodoxin domain K09181 - - 0.0 1095.0
BYD1_k127_6363852_1 luciferase-like monooxygenase - - - 4.64e-217 676.0
BYD1_k127_6363852_10 - - - - 0.000000000000000000000000000000000000000001644 166.0
BYD1_k127_6363852_11 gtp1 obg K06944 - - 0.000000000000000000000000000000000000008048 159.0
BYD1_k127_6363852_12 Winged helix DNA-binding domain - - - 0.000000000000000000004757 95.0
BYD1_k127_6363852_13 PFAM Cupin 2 conserved barrel domain protein - - - 0.000000000001564 80.0
BYD1_k127_6363852_14 - - - - 0.0000001105 59.0
BYD1_k127_6363852_2 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 455.0
BYD1_k127_6363852_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006994 411.0
BYD1_k127_6363852_4 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004926 350.0
BYD1_k127_6363852_5 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004527 280.0
BYD1_k127_6363852_6 NADPH-dependent FMN reductase K00299 - 1.5.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000008184 253.0
BYD1_k127_6363852_7 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001583 245.0
BYD1_k127_6363852_8 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000007626 201.0
BYD1_k127_6363852_9 TspO/MBR family K05770 - - 0.00000000000000000000000000000000000000000000001355 176.0
BYD1_k127_6371856_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000002025 208.0
BYD1_k127_6371856_1 hydrolase - - - 0.000000000000003992 76.0
BYD1_k127_640931_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K00058,K03977 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044464,GO:0071944 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 390.0
BYD1_k127_640931_1 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000000000000000000138 205.0
BYD1_k127_640931_2 Glycerol-3-phosphate responsive antiterminator K02443 - - 0.00000000000000000000002336 108.0
BYD1_k127_640931_3 Glycerol-3-phosphate responsive antiterminator K02443 - - 0.000001684 57.0
BYD1_k127_6428403_0 oxidoreductase activity K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001951 267.0
BYD1_k127_6428403_1 Toxic component of a toxin-antitoxin (TA) module. An RNase K07064 - - 0.0000000000000000000000000000000000000000002113 165.0
BYD1_k127_6428403_2 helix_turn_helix, mercury resistance - - - 0.0000000000000000000000000001934 122.0
BYD1_k127_6428403_3 AAA ATPase domain - - - 0.0000000000000004256 89.0
BYD1_k127_6428403_4 helicase superfamily c-terminal domain K03654 - 3.6.4.12 0.000000000006984 68.0
BYD1_k127_6428403_5 - - - - 0.0000000001035 67.0
BYD1_k127_6465564_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688 - - 0.0 2040.0
BYD1_k127_6465564_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000009313 177.0
BYD1_k127_6465564_2 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000008674 144.0
BYD1_k127_646989_0 Dihydroxyacetone kinase K00863 - 2.7.1.28,2.7.1.29,4.6.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 490.0
BYD1_k127_646989_1 Fructose-bisphosphate aldolase class-II K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 357.0
BYD1_k127_646989_2 Haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 333.0
BYD1_k127_646989_3 Putative sugar-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004699 238.0
BYD1_k127_646989_4 PFAM Dak phosphatase K05879 - 2.7.1.121 0.000000000000000000000000000000000000000000000000000000000000000005558 234.0
BYD1_k127_646989_5 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000000007094 194.0
BYD1_k127_646989_6 - - - - 0.000000000000000000000000000000000000000002448 170.0
BYD1_k127_646989_7 polygalacturonase activity K07407 - 3.2.1.22 0.00000000000000000000000001686 127.0
BYD1_k127_646989_8 Polysaccharide biosynthesis protein - - - 0.000000000000000000003673 110.0
BYD1_k127_646989_9 Phosphotransferase enzyme family - - - 0.0001942 55.0
BYD1_k127_649284_0 PFAM carbohydrate kinase K00854 - 2.7.1.17 2.197e-201 640.0
BYD1_k127_649284_1 Belongs to the xylose isomerase family K01805 - 5.3.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 595.0
BYD1_k127_649284_2 FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 593.0
BYD1_k127_649284_3 ABC transporter K10545 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000005752 248.0
BYD1_k127_649284_4 Pyridoxamine 5'-phosphate oxidase - - - 0.000000000000000000000000000000000000000000000000001054 205.0
BYD1_k127_649284_5 ABC transporter K10545 - 3.6.3.17 0.0000000000000000005213 87.0
BYD1_k127_6515701_0 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000007927 243.0
BYD1_k127_6515701_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000001475 236.0
BYD1_k127_6522012_0 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000225 176.0
BYD1_k127_6522012_1 Methyltransferase K08316 - 2.1.1.171 0.0000000000000000002699 93.0
BYD1_k127_6532405_0 Belongs to the ABC transporter superfamily K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 392.0
BYD1_k127_6532405_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 359.0
BYD1_k127_6532405_2 ABC transporter permease K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003292 289.0
BYD1_k127_6550633_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 549.0
BYD1_k127_6550633_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 367.0
BYD1_k127_6550633_10 Pfam:Pyridox_oxidase - - - 0.0000000000000000000000000000000003521 138.0
BYD1_k127_6550633_11 Methyltransferase small domain - - - 0.0000000000000000000000000000000003711 144.0
BYD1_k127_6550633_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000163 135.0
BYD1_k127_6550633_13 Sporulation protein YtfJ - - - 0.0000000000000006731 84.0
BYD1_k127_6550633_14 Putative stress-induced transcription regulator - - - 0.00000000003495 65.0
BYD1_k127_6550633_15 Putative zinc-finger - - - 0.000000001959 66.0
BYD1_k127_6550633_2 PFAM Helix-turn-helix, type 11 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004258 313.0
BYD1_k127_6550633_3 Methyltransferase type 11 K07755 - 2.1.1.137 0.000000000000000000000000000000000000000000000000000000000000000000000000000502 267.0
BYD1_k127_6550633_4 redox protein, regulator of disulfide bond formation - - - 0.00000000000000000000000000000000000000000000000000000000000000001078 231.0
BYD1_k127_6550633_5 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000001496 211.0
BYD1_k127_6550633_6 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000001471 207.0
BYD1_k127_6550633_7 Lysylphosphatidylglycerol synthase TM region K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000002056 186.0
BYD1_k127_6550633_8 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000011 164.0
BYD1_k127_6550633_9 Sigma-70 region 2 K03088 - - 0.00000000000000000000000000000000000000000005257 169.0
BYD1_k127_6621367_0 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 301.0
BYD1_k127_6621367_1 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000379 188.0
BYD1_k127_6621367_2 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.000000000000000000000006655 110.0
BYD1_k127_6621367_3 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000003541 87.0
BYD1_k127_6621367_4 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000003463 79.0
BYD1_k127_6634959_0 UvrD/REP helicase N-terminal domain K03657,K07465 - 3.6.4.12 1.218e-264 852.0
BYD1_k127_6634959_1 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 406.0
BYD1_k127_6634959_2 Protein of unknown function (DUF4446) - - - 0.000000000000000000000003326 109.0
BYD1_k127_6634959_3 phosphatase activity K07025 - - 0.00000000001083 76.0
BYD1_k127_6634959_4 response regulator - - - 0.0000000002083 71.0
BYD1_k127_6640799_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 3.463e-229 739.0
BYD1_k127_6640799_1 cell division - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 371.0
BYD1_k127_6655652_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 319.0
BYD1_k127_6655652_1 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001087 285.0
BYD1_k127_6655652_2 guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000003541 168.0
BYD1_k127_6655652_3 - - - - 0.0000000000000000000000000000008112 131.0
BYD1_k127_6655652_4 Methyltransferase domain - - - 0.0000001793 57.0
BYD1_k127_6660100_0 Multicopper oxidase K00368 - 1.7.2.1 1.503e-194 624.0
BYD1_k127_6660100_1 diguanylate cyclase - - - 0.00000000000000000000000000000000000000007926 158.0
BYD1_k127_6660100_2 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000003788 125.0
BYD1_k127_6660100_3 transcriptional regulator, Rrf2 family - - - 0.00000000000000000000000000003847 123.0
BYD1_k127_666261_0 trimethylamine methyltransferase K14083 - 2.1.1.250 3.625e-212 685.0
BYD1_k127_666261_1 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004285 434.0
BYD1_k127_666261_10 PFAM amino acid-binding ACT domain protein K06862 - - 0.000000000000000000000000000000000000000000000000000007722 200.0
BYD1_k127_666261_11 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000004927 172.0
BYD1_k127_666261_12 ArsC family - - - 0.00000000000000000000000000000000005096 147.0
BYD1_k127_666261_13 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000002674 131.0
BYD1_k127_666261_14 Rieske-like [2Fe-2S] domain K05710 - - 0.0000000000003096 76.0
BYD1_k127_666261_15 Transcriptional regulator MarR - - - 0.000000000009621 72.0
BYD1_k127_666261_17 - - - - 0.00004129 48.0
BYD1_k127_666261_2 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 396.0
BYD1_k127_666261_3 exonuclease of the beta-lactamase fold involved in RNA K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 354.0
BYD1_k127_666261_4 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 324.0
BYD1_k127_666261_5 Ring hydroxylating alpha subunit (catalytic domain) K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000977 319.0
BYD1_k127_666261_6 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001639 294.0
BYD1_k127_666261_7 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000003448 266.0
BYD1_k127_666261_8 Luciferase-like monooxygenase K04091 - 1.14.14.5 0.000000000000000000000000000000000000000000000000000000000000000000000001631 255.0
BYD1_k127_666261_9 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B K02823 - - 0.0000000000000000000000000000000000000000000000000000003238 205.0
BYD1_k127_6680807_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1115.0
BYD1_k127_6681383_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 318.0
BYD1_k127_6681383_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K03074,K12257 GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0030312,GO:0031224,GO:0031226,GO:0033036,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000001144 211.0
BYD1_k127_6681383_2 Dipeptidyl peptidase IV (DPP IV) N-terminal region K03641 - - 0.000000595 63.0
BYD1_k127_6701118_0 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003154 353.0
BYD1_k127_6701118_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0042802,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.0000000000000000000000000000000000000000000000000000000000000000009292 240.0
BYD1_k127_6701118_10 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000005811 68.0
BYD1_k127_6701118_11 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000001384 76.0
BYD1_k127_6701118_2 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000002088 233.0
BYD1_k127_6701118_3 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000000000000000000000000000002815 168.0
BYD1_k127_6701118_4 PFAM VanW family protein - - - 0.0000000000000000000000000000000000000004083 169.0
BYD1_k127_6701118_5 regulation of RNA biosynthetic process - - - 0.0000000000000000000000000000002828 136.0
BYD1_k127_6701118_6 PFAM single-stranded nucleic acid binding R3H domain protein K06346 - - 0.000000000000000000000000000008199 138.0
BYD1_k127_6701118_7 DSBA-like thioredoxin domain - - - 0.0000000000000000000000000000202 130.0
BYD1_k127_6701118_8 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000008047 100.0
BYD1_k127_6701118_9 60Kd inner membrane protein K03217 - - 0.0000000000000000000002656 111.0
BYD1_k127_6740857_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 482.0
BYD1_k127_6740857_1 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 406.0
BYD1_k127_6740857_10 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.0000000007527 69.0
BYD1_k127_6740857_2 NAD binding domain of 6-phosphogluconate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 327.0
BYD1_k127_6740857_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901576 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001017 295.0
BYD1_k127_6740857_4 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005077 254.0
BYD1_k127_6740857_5 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000005583 179.0
BYD1_k127_6740857_6 - - - - 0.00000000000000000000000000000002044 130.0
BYD1_k127_6740857_7 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000000000000000000000000004547 125.0
BYD1_k127_6740857_8 YbaB/EbfC DNA-binding family K09747 - - 0.00000000000000000000000001242 113.0
BYD1_k127_6740857_9 - - - - 0.0000000000000002957 80.0
BYD1_k127_6749241_0 ATP-dependent peptidase activity K01338 - 3.4.21.53 3.791e-194 619.0
BYD1_k127_675507_0 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000001896 162.0
BYD1_k127_675507_1 Putative glycolipid-binding - - - 0.000000000000000000000000000000000000006717 158.0
BYD1_k127_6793882_0 Acylphosphatase K01512 - 3.6.1.7 0.0000000000000000000004941 98.0
BYD1_k127_6793882_1 DNA polymerase III, delta subunit K02341 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0032991,GO:0034641,GO:0034645,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:1901360,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.0003668 51.0
BYD1_k127_6798114_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K13810 - 2.2.1.2,5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 458.0
BYD1_k127_6798114_1 D-gluconate metabolic process K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 390.0
BYD1_k127_6798114_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0016020,GO:0030312,GO:0040007,GO:0044424,GO:0044444,GO:0044464,GO:0071944 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 286.0
BYD1_k127_6798114_3 PFAM Ribose galactose isomerase K01808 - 5.3.1.6 0.0000000000000000000000000000000000000000000000003601 180.0
BYD1_k127_6839471_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002063 494.0
BYD1_k127_6839471_1 transferase K02851 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0016740,GO:0016772,GO:0016780,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000003434 239.0
BYD1_k127_6839471_2 Telomere recombination K07566 - 2.7.7.87 0.0000000000000000000000000000000006789 141.0
BYD1_k127_6839471_3 TIGRFAM Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily - - - 0.000000002554 60.0
BYD1_k127_6859349_0 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 365.0
BYD1_k127_6859349_1 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000005351 95.0
BYD1_k127_6859349_2 N-4 methylation of cytosine K00590 - 2.1.1.113 0.0000001592 62.0
BYD1_k127_6922402_0 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 566.0
BYD1_k127_6922402_1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 466.0
BYD1_k127_6922402_10 cobalt transport K16785 - - 0.000000000000000000000000003238 129.0
BYD1_k127_6922402_2 PFAM Transketolase central region K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 447.0
BYD1_k127_6922402_3 Dehydrogenase E1 component K00166 - 1.2.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 381.0
BYD1_k127_6922402_4 part of an ABC transporter complex. Responsible for energy coupling to the transport system K16785,K16786,K16787 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009386 351.0
BYD1_k127_6922402_5 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000008089 220.0
BYD1_k127_6922402_6 FES K03575 - - 0.000000000000000000000000000000000000000000000000000002336 208.0
BYD1_k127_6922402_7 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00658 GO:0003674,GO:0003824,GO:0004148,GO:0005488,GO:0005504,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008150,GO:0008152,GO:0008289,GO:0009405,GO:0009987,GO:0015036,GO:0016020,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0019725,GO:0030312,GO:0031405,GO:0031406,GO:0032991,GO:0033293,GO:0036094,GO:0040007,GO:0042592,GO:0043167,GO:0043168,GO:0043177,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0045254,GO:0045454,GO:0048037,GO:0050662,GO:0050789,GO:0050794,GO:0051704,GO:0055114,GO:0065007,GO:0065008,GO:0071944,GO:0097159,GO:1901363,GO:1901681,GO:1902494,GO:1990204 2.3.1.61 0.0000000000000000000000000000000002757 142.0
BYD1_k127_6922402_8 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000002937 142.0
BYD1_k127_6922402_9 Probable zinc-ribbon domain - - - 0.000000000000000000000000000001788 125.0
BYD1_k127_6927912_0 Carboxyl transferase domain K01969 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 442.0
BYD1_k127_6927912_1 PFAM Enoyl-CoA hydratase isomerase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000007815 221.0
BYD1_k127_6927912_2 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000001231 218.0
BYD1_k127_6927912_3 MOSC domain - - - 0.00000000000000000000000000000000008362 152.0
BYD1_k127_6927912_5 - - - - 0.00003243 50.0
BYD1_k127_6947518_0 PFAM ATP-binding region, ATPase domain protein K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000007736 184.0
BYD1_k127_6947518_1 Response regulator receiver K02483,K07658,K07668 - - 0.00000000000001774 74.0
BYD1_k127_7011881_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 541.0
BYD1_k127_7011881_1 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 456.0
BYD1_k127_7011881_2 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.0000000000000000000000000000000005977 150.0
BYD1_k127_7011881_3 Colicin V production protein K03558 - - 0.000683 49.0
BYD1_k127_7050329_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 377.0
BYD1_k127_7050329_1 SMART Nucleotide binding protein, PINc - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003092 301.0
BYD1_k127_7050329_2 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000004399 269.0
BYD1_k127_7098525_0 Belongs to the binding-protein-dependent transport system permease family K01997,K11956 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000595 334.0
BYD1_k127_7098525_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 316.0
BYD1_k127_7098525_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001396 285.0
BYD1_k127_7098525_3 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000004243 168.0
BYD1_k127_7098525_4 NYN domain - - - 0.000000000000000000000000000000000000709 155.0
BYD1_k127_7098525_5 PFAM GCN5-related N-acetyltransferase - - - 0.00007343 53.0
BYD1_k127_7132309_0 PFAM Phospholipid glycerol acyltransferase - - - 0.000000000000000000008811 104.0
BYD1_k127_7132454_0 glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000009737 218.0
BYD1_k127_7132454_1 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.00000000000000000000000000000000000000000000000000000001901 209.0
BYD1_k127_7132454_2 InterPro IPR014922 - - - 0.0000000000000000000000000000000000000000000000000000000663 200.0
BYD1_k127_7132454_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000003992 192.0
BYD1_k127_7132454_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000000000000005105 163.0
BYD1_k127_7132454_5 - - - - 0.00000001079 64.0
BYD1_k127_7139912_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 481.0
BYD1_k127_7139912_1 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 411.0
BYD1_k127_7139912_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 387.0
BYD1_k127_7139912_3 Endoribonuclease that initiates mRNA decay K18682 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.000000000000000000000000000000000000000000000000000000000000000001044 239.0
BYD1_k127_7139912_4 Ami_3 K01448 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008745,GO:0016787,GO:0016810,GO:0016811,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0061783 3.5.1.28 0.000000000000000000000000000000000000000000000000000000006117 220.0
BYD1_k127_7139912_5 Transcriptional regulator - - - 0.0000000000000000000000000000001655 128.0
BYD1_k127_7139912_6 phenylacetate-CoA ligase activity K01912 - 6.2.1.30 0.0000000000000000188 92.0
BYD1_k127_7139912_7 Protein of unknown function (DUF2905) - - - 0.000000000000001496 78.0
BYD1_k127_7139912_8 Modulates RecA activity K03565 - - 0.00000000000004861 81.0
BYD1_k127_715461_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 313.0
BYD1_k127_715461_1 PBS lyase K22221 - - 0.000000000001865 78.0
BYD1_k127_715461_2 Acyl-coenzyme A 6-aminopenicillanic acid acyl-transferase - - - 0.0004672 53.0
BYD1_k127_7169480_0 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 566.0
BYD1_k127_7169480_1 Phosphotriesterase family K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002994 291.0
BYD1_k127_7169480_2 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000006232 179.0
BYD1_k127_7200645_0 - - - - 0.0000000007226 71.0
BYD1_k127_7200645_1 - - - - 0.0004807 51.0
BYD1_k127_7266953_0 ATP dependent DNA ligase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 549.0
BYD1_k127_7266953_1 - - - - 0.000000000000000000000000000000000000000005939 164.0
BYD1_k127_72990_0 PFAM conserved K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000003572 241.0
BYD1_k127_72990_1 Helix-turn-helix domain - - - 0.0000268 53.0
BYD1_k127_7342350_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000007039 205.0
BYD1_k127_7342350_1 Thioredoxin-like - - - 0.00000000000000000000000000005026 124.0
BYD1_k127_7342350_2 COG2133 Glucose sorbosone dehydrogenases - - - 0.0000000000000000000001055 111.0
BYD1_k127_7348909_0 Domain of unknown function (DUF4173) - - - 0.00000000000000000000000000000000000106 158.0
BYD1_k127_7348909_1 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 0.00000000000000000000000005787 111.0
BYD1_k127_7348909_2 COG1196 Chromosome segregation ATPases - - - 0.0000000000000000000005308 109.0
BYD1_k127_7363971_0 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 522.0
BYD1_k127_7363971_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01880 GO:0003674,GO:0003824,GO:0004812,GO:0004820,GO:0005488,GO:0005515,GO:0016874,GO:0016875,GO:0046983,GO:0140098,GO:0140101 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 526.0
BYD1_k127_7363971_2 FAD dependent oxidoreductase K00301 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 331.0
BYD1_k127_7397159_0 binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription this protein is involved in detoxification and protection against antimicrobial K03088 - - 0.00000000000000000000004331 115.0
BYD1_k127_7397159_1 Putative Flp pilus-assembly TadE/G-like - - - 0.0000000000001802 80.0
BYD1_k127_7397159_2 Transmembrane secretion effector - - - 0.00000000008998 67.0
BYD1_k127_7397159_3 TadE-like protein - - - 0.0000000005406 66.0
BYD1_k127_7397159_4 PFAM TadE family protein - - - 0.00004278 53.0
BYD1_k127_7409511_0 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 447.0
BYD1_k127_7409511_1 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000003968 79.0
BYD1_k127_7409511_2 ABC-2 family transporter protein K01992 - - 0.000000000001504 68.0
BYD1_k127_7409511_3 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000009159 77.0
BYD1_k127_7409511_4 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.00006573 53.0
BYD1_k127_745528_0 GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002097 302.0
BYD1_k127_745528_1 PFAM aldo keto reductase - - - 0.0000000000000000000000000000000000000000001342 183.0
BYD1_k127_745528_2 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000105 176.0
BYD1_k127_745528_3 PFAM response regulator receiveR - - - 0.00000000000000000000000000000000000000007228 171.0
BYD1_k127_745528_4 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000000006211 124.0
BYD1_k127_745528_5 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000004396 107.0
BYD1_k127_745528_6 positive regulation of type IV pilus biogenesis K07343 - - 0.00000000000000000002017 96.0
BYD1_k127_745528_7 Psort location Cytoplasmic, score 7.50 - - - 0.0001211 45.0
BYD1_k127_7457729_0 phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000003846 183.0
BYD1_k127_7457729_1 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000777 108.0
BYD1_k127_748805_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000898 266.0
BYD1_k127_748805_1 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000001247 181.0
BYD1_k127_7510471_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 GO:0003674,GO:0003824,GO:0004042,GO:0004358,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006592,GO:0006807,GO:0008080,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.1,2.3.1.35 0.0000000000000000000000000000000000000000000000000000000000000000000023 256.0
BYD1_k127_7510471_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000004313 78.0
BYD1_k127_7522704_0 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000089 269.0
BYD1_k127_7522704_1 integral membrane protein K00728 - 2.4.1.109 0.0000000000298 75.0
BYD1_k127_7522704_2 - - - - 0.00002164 57.0
BYD1_k127_7552799_0 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002161 312.0
BYD1_k127_7552799_1 TIGRFAM FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002232 286.0
BYD1_k127_7552799_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000003092 159.0
BYD1_k127_7556968_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 470.0
BYD1_k127_7556968_1 fructose-1,6-bisphosphatase K02446 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000001666 68.0
BYD1_k127_7577830_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 4.705e-270 873.0
BYD1_k127_7577830_1 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0016787,GO:0016788,GO:0040007,GO:0044464,GO:0052689,GO:0071944,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000549 165.0
BYD1_k127_7577830_2 helix_turn_helix, cAMP Regulatory protein K10914 - - 0.0000000000007383 74.0
BYD1_k127_7577830_3 Pfam:Pyridox_oxidase - - - 0.0001727 45.0
BYD1_k127_7581952_0 Cys/Met metabolism PLP-dependent enzyme K00639 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008710,GO:0008890,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016407,GO:0016408,GO:0016453,GO:0016740,GO:0016746,GO:0016747,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005119 283.0
BYD1_k127_7581952_1 Beta-lactamase - GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0031123,GO:0034414,GO:0034470,GO:0034641,GO:0034660,GO:0040007,GO:0042779,GO:0042780,GO:0042781,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1905267 - 0.00000000000000000000000000000000008934 147.0
BYD1_k127_7581952_2 TIGRFAM histidinol phosphate phosphatase HisJ family K04486 GO:0000105,GO:0003674,GO:0003824,GO:0004401,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042578,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15 0.00000000000000000000000000003064 130.0
BYD1_k127_7581952_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000004672 124.0
BYD1_k127_7581952_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000003471 87.0
BYD1_k127_7581952_5 Conserved repeat domain - - - 0.00008374 51.0
BYD1_k127_7593292_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0001393 55.0
BYD1_k127_7596564_0 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate - - - 0.000000000000000000000002451 115.0
BYD1_k127_7684259_0 Glutaminyl-tRNA synthetase K01886 - 6.1.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 527.0
BYD1_k127_7684259_1 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. EgtE subfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002888 513.0
BYD1_k127_7684259_2 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 513.0
BYD1_k127_7684259_3 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000001848 179.0
BYD1_k127_7684259_4 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 0.00000002371 60.0
BYD1_k127_7684259_5 - - - - 0.0000003215 55.0
BYD1_k127_7698457_0 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 495.0
BYD1_k127_7698457_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.0006341 44.0
BYD1_k127_773051_0 Type II/IV secretion system protein K02283 - - 1.038e-206 651.0
BYD1_k127_773051_1 Type II secretion system (T2SS), protein F K12510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003103 259.0
BYD1_k127_773051_2 Type II secretion system (T2SS), protein F K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000001012 244.0
BYD1_k127_773051_3 NUBPL iron-transfer P-loop NTPase K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000181 238.0
BYD1_k127_773051_4 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000008979 93.0
BYD1_k127_7744232_1 helicase K03657 GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0006996,GO:0008094,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0040007,GO:0042623,GO:0043167,GO:0043169,GO:0046872,GO:0051276,GO:0071103,GO:0071840,GO:0140097 3.6.4.12 0.000000000000000000000000000000000000000001629 163.0
BYD1_k127_7744232_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000005481 111.0
BYD1_k127_7744232_3 Histidine kinase - - - 0.000000000000002613 91.0
BYD1_k127_7744232_4 Cysteine-rich secretory protein family - - - 0.0004748 53.0
BYD1_k127_7770351_0 Aldehyde dehydrogenase family K00130 - 1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000096 507.0
BYD1_k127_7770351_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009579 362.0
BYD1_k127_7770351_2 PFAM NUDIX domain - - - 0.000000000000000000000000000000000000001659 160.0
BYD1_k127_7770351_3 PFAM ROK family K00845,K00886 - 2.7.1.2,2.7.1.63 0.00000000001647 65.0
BYD1_k127_7834573_0 COG1215 Glycosyltransferases, probably involved in cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000001157 239.0
BYD1_k127_7834573_1 COG3944 Capsular polysaccharide biosynthesis protein K08252 - 2.7.10.1 0.000003371 57.0
BYD1_k127_7863_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 559.0
BYD1_k127_7863_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000213 254.0
BYD1_k127_7865981_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 2.394e-196 627.0
BYD1_k127_7865981_1 Rhamnan synthesis protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000001853 243.0
BYD1_k127_7865981_2 pfkB family carbohydrate kinase - - - 0.000000000000000000000002759 116.0
BYD1_k127_7915687_0 Belongs to the formate--tetrahydrofolate ligase family K01938 GO:0003674,GO:0003824,GO:0004329,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006144,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009112,GO:0009113,GO:0009256,GO:0009257,GO:0009396,GO:0009987,GO:0016053,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0016874,GO:0016879,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0042398,GO:0042440,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046112,GO:0046148,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.3 2.126e-212 689.0
BYD1_k127_7915687_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 371.0
BYD1_k127_7915687_2 PFAM Phenylalanine and histidine ammonia-lyase K01745 - 4.3.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000002714 264.0
BYD1_k127_7915687_3 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain K01491 GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000004535 261.0
BYD1_k127_7915687_4 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000403 171.0
BYD1_k127_7915687_5 PFAM Formiminotransferase-cyclodeaminase - - - 0.000000000000000000000000000003202 131.0
BYD1_k127_7932349_0 Homocysteine S-methyltransferase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 390.0
BYD1_k127_7932349_1 TPM domain - - - 0.00000000000000000527 99.0
BYD1_k127_7938382_0 Transcriptional regulator sugar kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 322.0
BYD1_k127_7938382_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002033 281.0
BYD1_k127_7938382_2 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004014 239.0
BYD1_k127_7939416_0 N-terminal domain of (some) glycogen debranching enzymes - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008092 565.0
BYD1_k127_7939416_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000001407 187.0
BYD1_k127_7939416_2 Cof-like hydrolase - - - 0.00000000000000000000000000000000000000007688 166.0
BYD1_k127_7939416_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000003988 61.0
BYD1_k127_7961912_0 PFAM UDP-glucose GDP-mannose dehydrogenase family, NAD binding domain K02472,K13015 - 1.1.1.136,1.1.1.336 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004941 403.0
BYD1_k127_7961912_1 TIGRFAM MazG family protein K02428,K02499 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000003227 264.0
BYD1_k127_7961912_2 Glycosyl transferase 4-like - - - 0.000000000000000000000000000000000000000000000000000000000000000003596 254.0
BYD1_k127_7961912_3 ATPases associated with a variety of cellular activities K01990 - - 0.00000000000000000000000000000000000000000000000000000000003299 226.0
BYD1_k127_7961912_4 Transport permease protein K09688,K09690 - - 0.00000000000000000000000000000000000000009282 165.0
BYD1_k127_7961912_5 Glycosyl transferases group 1 K16150 - 2.4.1.11 0.0000000000000000000000000000003447 141.0
BYD1_k127_7961912_6 PFAM Glycosyl transferase, group 1 K13668 GO:0000009,GO:0000030,GO:0003674,GO:0003824,GO:0004376,GO:0005575,GO:0005623,GO:0005886,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0033164,GO:0040007,GO:0043750,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0070085,GO:0071704,GO:0071944,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.4.1.346 0.0000000001933 72.0
BYD1_k127_7961912_7 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000003375 70.0
BYD1_k127_7972244_0 Anticodon-binding domain of tRNA K01870 - 6.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 577.0
BYD1_k127_7972244_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000005075 278.0
BYD1_k127_7972244_2 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 GO:0003674,GO:0003678,GO:0003824,GO:0004003,GO:0004386,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006268,GO:0006270,GO:0006281,GO:0006302,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0033554,GO:0034641,GO:0034645,GO:0042623,GO:0043138,GO:0043140,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0046483,GO:0050896,GO:0051276,GO:0051716,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:1901360,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000008501 216.0
BYD1_k127_7972244_3 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.00000000000000000000000000000000000000003486 169.0
BYD1_k127_7972244_4 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000008387 104.0
BYD1_k127_7977233_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 8.415e-232 731.0
BYD1_k127_7977233_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 409.0
BYD1_k127_7977233_10 PFAM NUDIX hydrolase - - - 0.0000000000000000000000000000006636 127.0
BYD1_k127_7977233_11 EamA-like transporter family - - - 0.0000000000000000000000000000154 129.0
BYD1_k127_7977233_12 Belongs to the sigma-70 factor family K03088 - - 0.00000000000000000000003522 106.0
BYD1_k127_7977233_13 PFAM Polyketide cyclase dehydrase - - - 0.0000004448 58.0
BYD1_k127_7977233_15 Glycosyltransferase family 87 - - - 0.00003907 56.0
BYD1_k127_7977233_16 Polyketide cyclase / dehydrase and lipid transport - - - 0.000488 51.0
BYD1_k127_7977233_2 Exporter of polyketide antibiotics K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 413.0
BYD1_k127_7977233_3 Aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 355.0
BYD1_k127_7977233_4 PFAM YibE F-like protein - - - 0.0000000000000000000000000000000000000000000000000000001562 213.0
BYD1_k127_7977233_5 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000002618 188.0
BYD1_k127_7977233_6 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000899 183.0
BYD1_k127_7977233_7 geranylgeranyl reductase activity K21401 - 1.3.99.38 0.00000000000000000000000000000000000000000000004897 186.0
BYD1_k127_7977233_8 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.0000000000000000000000000000000000000000003231 163.0
BYD1_k127_7977233_9 MarR family - - - 0.000000000000000000000000000000315 128.0
BYD1_k127_8001409_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 541.0
BYD1_k127_8001409_1 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000003363 242.0
BYD1_k127_8001409_2 Glycine cleavage T-protein C-terminal barrel domain K00605 - 2.1.2.10 0.00000000000000000000000000001801 120.0
BYD1_k127_8001409_3 Protein of unknown function DUF45 K07043 - - 0.000000000000000000000000000316 132.0
BYD1_k127_8001409_4 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000006455 115.0
BYD1_k127_8001409_5 DinB superfamily - - - 0.0000000000000000003167 99.0
BYD1_k127_8001409_6 EamA-like transporter family - - - 0.00000001665 66.0
BYD1_k127_800751_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008065 374.0
BYD1_k127_800751_1 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000007711 237.0
BYD1_k127_800751_10 membrane - - - 0.000000001701 69.0
BYD1_k127_800751_11 Cold shock K03704 - - 0.000000003272 62.0
BYD1_k127_800751_12 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000001112 60.0
BYD1_k127_800751_2 Acetyltransferase (GNAT) family K00657 - 2.3.1.57 0.00000000000000000000000000000000000000000000000000000005179 205.0
BYD1_k127_800751_3 MFS transporter K03449 - - 0.000000000000000000000000000000000000000000000000000008033 206.0
BYD1_k127_800751_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000001141 133.0
BYD1_k127_800751_5 Cupin - - - 0.000000000000000000000002659 108.0
BYD1_k127_800751_6 membrane - - - 0.00000000000000000000002774 113.0
BYD1_k127_800751_7 Protein of unknown function (DUF1269) - - - 0.0000000000000000003871 93.0
BYD1_k127_800751_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000584 85.0
BYD1_k127_800751_9 PspC domain - - - 0.00000000006869 70.0
BYD1_k127_808508_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000337 499.0
BYD1_k127_808508_1 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000151 251.0
BYD1_k127_808508_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.000000000000000000000000000000000000000000000000000001229 211.0
BYD1_k127_808508_3 PFAM GDSL-like Lipase Acylhydrolase - - - 0.0000000000000000000000000000000006003 142.0
BYD1_k127_808508_4 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000001292 117.0
BYD1_k127_8096454_0 IMP dehydrogenase / GMP reductase domain K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 385.0
BYD1_k127_8096454_1 COG0477 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 329.0
BYD1_k127_8096454_2 dehydratase - - - 0.00000000000000000000000000000000000008785 155.0
BYD1_k127_8096454_3 protein conserved in bacteria - - - 0.0000000000000000000000000000000003807 135.0
BYD1_k127_8096454_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000704 101.0
BYD1_k127_8108107_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009994 362.0
BYD1_k127_8108107_1 PFAM D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region - - - 0.000000000000000000000000000000000005447 142.0
BYD1_k127_8108107_2 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000001316 153.0
BYD1_k127_8108107_3 pfkB family carbohydrate kinase - - - 0.0001256 53.0
BYD1_k127_8113441_0 ATPases associated with a variety of cellular activities K10112,K10195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 463.0
BYD1_k127_8113441_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 455.0
BYD1_k127_8113441_2 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 412.0
BYD1_k127_8113441_3 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007881 268.0
BYD1_k127_8113441_4 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000003254 211.0
BYD1_k127_8113441_5 PFAM NUDIX hydrolase K01515 - 3.6.1.13 0.0000000000000000000000000000000000000001902 166.0
BYD1_k127_8113441_6 Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol K15520 GO:0000302,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009058,GO:0009268,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0010125,GO:0010126,GO:0010447,GO:0016137,GO:0016138,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0033554,GO:0034599,GO:0034614,GO:0035447,GO:0035690,GO:0040007,GO:0042221,GO:0042493,GO:0042542,GO:0044110,GO:0044116,GO:0044117,GO:0044119,GO:0044237,GO:0044249,GO:0044272,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051186,GO:0051188,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071467,GO:0071468,GO:0071704,GO:0097237,GO:0104004,GO:1901135,GO:1901137,GO:1901576,GO:1901657,GO:1901659,GO:1901700,GO:1901701 2.3.1.189 0.000000000000000000000004557 117.0
BYD1_k127_8115851_0 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009278 365.0
BYD1_k127_8115851_1 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000004644 216.0
BYD1_k127_8115851_2 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000001561 207.0
BYD1_k127_8159049_0 ABC 3 transport family K09819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002242 267.0
BYD1_k127_8159049_1 ATPases associated with a variety of cellular activities K09820 - - 0.000000000000000000000000000000000000000000000000000000000000000001365 253.0
BYD1_k127_8159049_2 methylglyoxal synthase activity K01734 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0008150,GO:0008152,GO:0008929,GO:0009058,GO:0009438,GO:0009987,GO:0016829,GO:0016835,GO:0016838,GO:0019242,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0071704,GO:1901576 4.2.3.3 0.0000000000000000000000000000000000000000000000000000000000000004029 224.0
BYD1_k127_8159049_3 Belongs to the bacterial solute-binding protein 9 family K09818 - - 0.000000000000000000000000000000000000000000000000000000000002217 224.0
BYD1_k127_8159049_4 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.000000000000000000000000000000000000000001092 162.0
BYD1_k127_8159049_5 Ferric uptake regulator family K03711 - - 0.0000000000000000000000000008393 117.0
BYD1_k127_8159049_6 Multicopper oxidase K00368 - 1.7.2.1 0.000000000000006909 87.0
BYD1_k127_8159049_7 Cell wall-active antibiotics response 4TMS YvqF - - - 0.000000007812 67.0
BYD1_k127_8182014_0 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002406 271.0
BYD1_k127_8182014_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003242 262.0
BYD1_k127_8182014_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000001759 126.0
BYD1_k127_8182014_3 Heat shock 70 kDa protein K04043 - - 0.00000000000000000000274 94.0
BYD1_k127_8204077_0 N-acetylglucosaminylinositol deacetylase activity - - - 0.000000000000000004583 95.0
BYD1_k127_8204077_1 Glycosyl transferase K00728 - 2.4.1.109 0.0000004994 61.0
BYD1_k127_820434_0 AAA domain, putative AbiEii toxin, Type IV TA system K02028,K02029 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000578 325.0
BYD1_k127_820434_1 Binding-protein-dependent transport system inner membrane component K02029,K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 293.0
BYD1_k127_820434_2 Bacterial periplasmic substrate-binding proteins K02030,K02424,K17073 - - 0.0000000000000000000000000000000000000000000000000007114 188.0
BYD1_k127_820434_3 PFAM glutamine amidotransferase class-I K07010 - - 0.0000000000359 68.0
BYD1_k127_8289274_0 Zincin-like metallopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001734 265.0
BYD1_k127_8289274_1 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.000000000000000000000000000000000000000000000000000000000001436 231.0
BYD1_k127_8289274_2 NUBPL iron-transfer P-loop NTPase K02282 - - 0.000000000000000000000002088 117.0
BYD1_k127_8289274_3 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000008555 78.0
BYD1_k127_8289274_4 Methyltransferase domain - - - 0.00000000783 64.0
BYD1_k127_8309993_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 7.723e-224 716.0
BYD1_k127_8309993_1 Saccharopine dehydrogenase K00290 - 1.5.1.7 0.000000000000000000000000000000000000000000000000000003236 194.0
BYD1_k127_8309993_2 PFAM CHAD domain containing protein - - - 0.00000002205 65.0
BYD1_k127_834561_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000001024 206.0
BYD1_k127_834561_1 cell division protein FtsQ K03589 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0040007,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0071944 - 0.00006021 54.0
BYD1_k127_8362862_0 family 4 K01222 - 3.2.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 511.0
BYD1_k127_8362862_1 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001458 465.0
BYD1_k127_8362862_10 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.000000000000000000000000000003067 133.0
BYD1_k127_8362862_11 Transcriptional regulatory protein, C terminal K07667 - - 0.00000000000000000000000000002114 133.0
BYD1_k127_8362862_12 - - - - 0.0000000000000001634 86.0
BYD1_k127_8362862_13 PFAM blue (type 1) copper domain protein - - - 0.00000000000004377 83.0
BYD1_k127_8362862_14 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000000005351 78.0
BYD1_k127_8362862_15 membrane protein (DUF2078) K08982 - - 0.0000002796 60.0
BYD1_k127_8362862_16 integral membrane protein - - - 0.00006976 50.0
BYD1_k127_8362862_2 carbohydrate transport K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 400.0
BYD1_k127_8362862_3 COGs COG1136 ABC-type antimicrobial peptide transport system ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000406 386.0
BYD1_k127_8362862_4 transmembrane transport K02025,K05814,K10118,K10237,K10241,K15771,K17235,K17242,K17316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003065 356.0
BYD1_k127_8362862_5 efflux transmembrane transporter activity K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 316.0
BYD1_k127_8362862_6 Two component transcriptional regulator, winged helix family K07669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 296.0
BYD1_k127_8362862_7 efflux transmembrane transporter activity K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005404 283.0
BYD1_k127_8362862_8 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000007027 235.0
BYD1_k127_8362862_9 UbiC transcription regulator-associated domain protein K03710 - - 0.00000000000000000000000000000000000000000000000000000000003817 219.0
BYD1_k127_83879_0 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 335.0
BYD1_k127_83879_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 GO:0003674,GO:0003824,GO:0004016,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009975,GO:0016020,GO:0016021,GO:0016829,GO:0016849,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 2.7.7.85 0.0000000000000000000000000000000000000000000000000000002891 207.0
BYD1_k127_83879_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000006791 169.0
BYD1_k127_83879_3 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000917 164.0
BYD1_k127_83879_4 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000001669 133.0
BYD1_k127_83879_5 YbbR-like protein - - - 0.0000000000000000009983 102.0
BYD1_k127_83879_6 RNA-binding protein Musashi homolog 1 K14411 GO:0000003,GO:0000900,GO:0001666,GO:0001709,GO:0003006,GO:0003008,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005844,GO:0006417,GO:0006950,GO:0007275,GO:0007276,GO:0007281,GO:0007399,GO:0007423,GO:0008150,GO:0008187,GO:0008266,GO:0009628,GO:0009719,GO:0009725,GO:0009888,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017145,GO:0017148,GO:0019222,GO:0019827,GO:0019953,GO:0022412,GO:0022414,GO:0022416,GO:0030154,GO:0030371,GO:0030855,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033554,GO:0034248,GO:0034249,GO:0036293,GO:0036294,GO:0042078,GO:0042221,GO:0042802,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045165,GO:0045182,GO:0048468,GO:0048513,GO:0048519,GO:0048523,GO:0048609,GO:0048731,GO:0048856,GO:0048863,GO:0048864,GO:0048869,GO:0050789,GO:0050794,GO:0050877,GO:0050896,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051301,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0065007,GO:0070482,GO:0070887,GO:0071453,GO:0071456,GO:0080090,GO:0090079,GO:0097159,GO:0098727,GO:1901363,GO:1990904,GO:2000112,GO:2000113 - 0.0004584 47.0
BYD1_k127_8416098_0 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000007246 220.0
BYD1_k127_8416098_1 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000001287 158.0
BYD1_k127_8430517_0 diguanylate cyclase - - - 0.000000000000000000000000000000000000003285 161.0
BYD1_k127_8430517_1 Polysaccharide deacetylase - - - 0.000000000000000001175 96.0
BYD1_k127_8437691_0 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 5.999e-213 668.0
BYD1_k127_8437691_1 Belongs to the MIP aquaporin (TC 1.A.8) family K02440 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002332 268.0
BYD1_k127_8461872_0 Carbamoyl-phosphate synthetase large chain domain protein K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 524.0
BYD1_k127_8461872_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 457.0
BYD1_k127_8461872_10 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000004244 163.0
BYD1_k127_8461872_11 cell envelope-related transcriptional attenuator - - - 0.000000000000000000000000000000000002073 155.0
BYD1_k127_8461872_12 Bacterial sugar transferase - - - 0.00000000000000000000000000000004106 134.0
BYD1_k127_8461872_13 Cell envelope-related transcriptional attenuator domain - - - 0.0000000000000000000000000000001339 137.0
BYD1_k127_8461872_14 Calcineurin-like phosphoesterase superfamily domain - - - 0.00000000000000000000000000004343 131.0
BYD1_k127_8461872_15 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000001759 133.0
BYD1_k127_8461872_16 OsmC-like protein - - - 0.000000000000000000000000001716 117.0
BYD1_k127_8461872_17 PFAM O-Antigen ligase - - - 0.0000000000000000002519 103.0
BYD1_k127_8461872_18 PFAM glycosyl transferase group 1 - - - 0.0000000000000004054 91.0
BYD1_k127_8461872_19 Pkd domain containing protein - - - 0.0000004098 63.0
BYD1_k127_8461872_2 PFAM polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000207 445.0
BYD1_k127_8461872_20 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 GO:0003674,GO:0003824,GO:0003989,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009305,GO:0009987,GO:0016049,GO:0016053,GO:0016421,GO:0016874,GO:0016885,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 - 0.000009616 55.0
BYD1_k127_8461872_21 Polysaccharide biosynthesis protein - - - 0.0000123 58.0
BYD1_k127_8461872_22 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.00002103 56.0
BYD1_k127_8461872_3 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066 400.0
BYD1_k127_8461872_4 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 379.0
BYD1_k127_8461872_5 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 352.0
BYD1_k127_8461872_6 short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002866 284.0
BYD1_k127_8461872_7 PFAM Glycosyl transferase family 2 K16557 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000001404 265.0
BYD1_k127_8461872_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000001772 204.0
BYD1_k127_8461872_9 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000001681 194.0
BYD1_k127_8465000_0 F420H(2)-dependent quinone reductase - - - 0.0000004544 55.0
BYD1_k127_8492045_0 Double zinc ribbon - - - 0.00000000000000000000006446 115.0
BYD1_k127_8492045_1 CAAX protease self-immunity - - - 0.0000000003911 72.0
BYD1_k127_8544268_0 Zn-dependent dipeptidase, microsomal dipeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 412.0
BYD1_k127_8544268_1 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 301.0
BYD1_k127_8544268_2 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000423 289.0
BYD1_k127_8544268_3 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000004368 258.0
BYD1_k127_8544268_4 Involved in DNA repair and RecF pathway recombination K03584 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009295,GO:0009987,GO:0033554,GO:0034641,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:1901360 - 0.0000000000000000000000000000000000000000000000204 183.0
BYD1_k127_8566579_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00596,K00823 - 2.6.1.19,4.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008678 556.0
BYD1_k127_8566579_1 Belongs to the aldehyde dehydrogenase family K00294 - 1.2.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 545.0
BYD1_k127_8566579_2 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 389.0
BYD1_k127_8566579_3 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000374 242.0
BYD1_k127_8566579_4 PFAM Cupin 2, conserved barrel - - - 0.0000000000000000000000001368 119.0
BYD1_k127_8566579_5 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.00000000004922 72.0
BYD1_k127_8566579_6 Copper binding proteins, plastocyanin/azurin family - - - 0.000000006821 64.0
BYD1_k127_856826_0 PFAM Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000004996 204.0
BYD1_k127_856826_1 TspO/MBR family K05770 - - 0.000000000000000000000000000000000000000000000000004169 188.0
BYD1_k127_856826_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000002255 181.0
BYD1_k127_856826_3 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000002413 173.0
BYD1_k127_856826_4 Aminoglycoside 2'-N-acetyltransferase K17840 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008080,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016020,GO:0016137,GO:0016139,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016999,GO:0017001,GO:0017144,GO:0030647,GO:0030649,GO:0034069,GO:0044237,GO:0044248,GO:0044464,GO:0047921,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901575,GO:1901657,GO:1901658 2.3.1.59 0.000000000000000000000000000000000000000000001028 174.0
BYD1_k127_856826_5 PFAM Bacterial regulatory protein, arsR family - - - 0.00000000000000000000000000000000000000000007959 162.0
BYD1_k127_856826_6 glyoxalase III activity - - - 0.000000000000000000000000000000000001759 144.0
BYD1_k127_856826_7 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000001046 120.0
BYD1_k127_8578862_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009003 276.0
BYD1_k127_8578862_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.00000000000000000000000000000000000000000000000000000000000000006379 229.0
BYD1_k127_8578862_2 Creatinase/Prolidase N-terminal domain K01262,K01271 - 3.4.11.9,3.4.13.9 0.0000000000000000000000000000000000000000000000000000000000006978 229.0
BYD1_k127_8578862_3 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000009451 181.0
BYD1_k127_8580719_0 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 398.0
BYD1_k127_8580719_1 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009485 253.0
BYD1_k127_8580719_2 Histidine kinase K07642 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000641 208.0
BYD1_k127_8580719_3 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000665 198.0
BYD1_k127_8580719_4 HAD-hyrolase-like K01091 - 3.1.3.18 0.00000000000000000000000000004038 126.0
BYD1_k127_8580719_5 Protein conserved in bacteria - - - 0.000000000000000000000009912 107.0
BYD1_k127_8580719_6 DOMON domain-containing protein - - - 0.0000000000000000000004412 109.0
BYD1_k127_8580719_7 - - - - 0.0000000000000000001937 97.0
BYD1_k127_8580719_8 alcohol dehydrogenase - - - 0.00000000000000002529 83.0
BYD1_k127_8619090_0 COGs COG2141 Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000009517 246.0
BYD1_k127_8619090_1 stress-induced mitochondrial fusion - - - 0.00000000000000000000000000000000000000000000000002255 192.0
BYD1_k127_8619090_2 Nickel-containing superoxide dismutase K00518 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.15.1.1 0.00000000000000000000000000000000000000004212 157.0
BYD1_k127_8619090_3 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.0000000008237 67.0
BYD1_k127_8619090_4 Lysin motif - - - 0.0000001133 64.0
BYD1_k127_8619090_5 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00006493 48.0
BYD1_k127_8619090_6 SIS domain K00820 - 2.6.1.16 0.0003875 52.0
BYD1_k127_8633144_0 E1-E2 ATPase K01533,K17686 - 3.6.3.4,3.6.3.54 1.537e-234 746.0
BYD1_k127_8633144_1 Berberine and berberine like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 484.0
BYD1_k127_8633144_10 Luciferase-like monooxygenase - - - 0.00000000000000000000000003674 113.0
BYD1_k127_8633144_11 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000001108 79.0
BYD1_k127_8633144_12 4Fe-4S binding domain K00176 - 1.2.7.3 0.00000000000002019 85.0
BYD1_k127_8633144_13 - - - - 0.0000000002906 70.0
BYD1_k127_8633144_2 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 456.0
BYD1_k127_8633144_3 Pyruvate:ferredoxin oxidoreductase core domain II K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004688 395.0
BYD1_k127_8633144_4 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 308.0
BYD1_k127_8633144_5 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000003266 213.0
BYD1_k127_8633144_6 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K00177 - 1.2.7.1,1.2.7.3 0.000000000000000000000000000000000000000000396 164.0
BYD1_k127_8633144_7 Domain of unknown function (DUF4872) - - - 0.00000000000000000000000000000000002189 152.0
BYD1_k127_8633144_8 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000008905 121.0
BYD1_k127_8633144_9 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000001655 111.0
BYD1_k127_8644002_0 Alpha amylase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 552.0
BYD1_k127_8644002_1 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000001533 179.0
BYD1_k127_8644002_2 DNA-binding transcription factor activity K03710 - - 0.0000000000000000000000000000002762 136.0
BYD1_k127_866272_0 oligosaccharyl transferase activity - - - 0.0000000000000000000000000000000000000000001982 182.0
BYD1_k127_8717086_0 bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000749 360.0
BYD1_k127_8717086_1 Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate K00761 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006752 289.0
BYD1_k127_8717086_10 heat shock protein binding K03686 GO:0000122,GO:0001671,GO:0003674,GO:0003712,GO:0003714,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006355,GO:0006357,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008047,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031974,GO:0031981,GO:0032781,GO:0033554,GO:0035966,GO:0042221,GO:0043085,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043462,GO:0043618,GO:0043620,GO:0044087,GO:0044093,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051117,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051345,GO:0051716,GO:0060255,GO:0060589,GO:0060590,GO:0061077,GO:0065007,GO:0065009,GO:0070013,GO:0080090,GO:0080134,GO:0080135,GO:0090083,GO:0090084,GO:0097201,GO:0098772,GO:0140110,GO:1900034,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.00000003059 64.0
BYD1_k127_8717086_2 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002056 267.0
BYD1_k127_8717086_3 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007819 273.0
BYD1_k127_8717086_4 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000000000000000002735 203.0
BYD1_k127_8717086_5 L-asparaginase II - - - 0.00000000000000000000000000000000000000000000004927 190.0
BYD1_k127_8717086_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000002626 156.0
BYD1_k127_8717086_7 Cupin domain - - - 0.0000000000000000000000000000000000000006868 155.0
BYD1_k127_8717086_8 Uncharacterized protein conserved in bacteria (DUF2087) - - - 0.0000000000000000000000001256 114.0
BYD1_k127_8717086_9 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000000002287 103.0
BYD1_k127_8729494_0 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001407 252.0
BYD1_k127_8729494_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07777 - 2.7.13.3 0.000000000000000000000000000000000000005072 162.0
BYD1_k127_8735285_0 amino acid - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 501.0
BYD1_k127_8735285_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000001611 231.0
BYD1_k127_8735285_2 Transcriptional regulatory protein, C terminal K07667 - - 0.000000000000000000000000000000000000000000000000000000001117 211.0
BYD1_k127_8741167_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008663 422.0
BYD1_k127_8741167_1 PFAM sigma-70 region 2 domain protein K03088 - - 0.0000000000000000000000000000000000000007415 154.0
BYD1_k127_8757648_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 409.0
BYD1_k127_8757648_1 G5 domain protein - - - 0.00000000000000000000000000325 115.0
BYD1_k127_8765716_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 312.0
BYD1_k127_8765716_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000002124 77.0
BYD1_k127_8765716_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K15546 - - 0.00002474 54.0
BYD1_k127_8775381_0 HMGL-like K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 320.0
BYD1_k127_8775381_1 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005036 279.0
BYD1_k127_8775381_2 HNH endonuclease - - - 0.000000000000000000000000000000000000000000000000000000000003014 213.0
BYD1_k127_8780847_0 Carbamoyl-phosphate synthase K01955 GO:0000050,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016884,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.5.5 1.59e-281 908.0
BYD1_k127_8780847_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000005764 197.0
BYD1_k127_8780847_2 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000001029 153.0
BYD1_k127_8802779_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 8.269e-247 772.0
BYD1_k127_8802779_1 amine oxidase K06954 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001956 357.0
BYD1_k127_8802779_10 TIGRFAM LPXTG-motif cell wall anchor domain - - - 0.00000000000000000000000000000000000000008874 163.0
BYD1_k127_8802779_11 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0000000000000000000000004832 119.0
BYD1_k127_8802779_12 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000002757 102.0
BYD1_k127_8802779_2 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 342.0
BYD1_k127_8802779_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005004 290.0
BYD1_k127_8802779_4 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008365 256.0
BYD1_k127_8802779_5 Glycosyl transferase, family 2 K00786 - - 0.000000000000000000000000000000000000000000000000000000000000000000006607 243.0
BYD1_k127_8802779_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000012 239.0
BYD1_k127_8802779_7 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.000000000000000000000000000000000000000000000001638 182.0
BYD1_k127_8802779_8 Protein of unknown function (DUF1365) K09701 - - 0.0000000000000000000000000000000000000000000004104 179.0
BYD1_k127_8802779_9 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000004366 177.0
BYD1_k127_8822915_0 Lysine-2,3-aminomutase K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000002889 216.0
BYD1_k127_8841176_0 penicillin amidase K01434 - 3.5.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 586.0
BYD1_k127_8841176_1 FeS assembly protein SufD K09014,K09015 - - 0.000000000000000000000000000000000000000000000154 185.0
BYD1_k127_8841176_2 FeS assembly protein SufB K09014 - - 0.00000000000000000000000000000004888 125.0
BYD1_k127_8841176_3 COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases K05710 - - 0.000000000000367 78.0
BYD1_k127_8853796_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 456.0
BYD1_k127_8853796_1 Heat shock protein DnaJ domain protein K03686,K05516 - - 0.0000000000000000000000000000000000000000000003727 176.0
BYD1_k127_8854944_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 427.0
BYD1_k127_8854944_1 COG1177 ABC-type spermidine putrescine transport system, permease component II K11070 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000152 277.0
BYD1_k127_8903262_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007133 601.0
BYD1_k127_8903262_1 PFAM alanine dehydrogenase PNT domain protein K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 413.0
BYD1_k127_8903262_10 - - - - 0.000000000000000000003029 96.0
BYD1_k127_8903262_2 the transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 317.0
BYD1_k127_8903262_3 reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005184 288.0
BYD1_k127_8903262_4 Enoyl-(Acyl carrier protein) reductase K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004085 275.0
BYD1_k127_8903262_5 Glycosyltransferase like family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000008136 209.0
BYD1_k127_8903262_6 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000001186 182.0
BYD1_k127_8903262_7 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.00000000000000000000000000000000000000000000009115 179.0
BYD1_k127_8903262_8 CAAX protease self-immunity K07052 - - 0.00000000000000000000000000000003785 139.0
BYD1_k127_8903262_9 NADP transhydrogenase K00324 - 1.6.1.2 0.000000000000000000000000000001957 124.0
BYD1_k127_8933745_0 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000005852 186.0
BYD1_k127_8933745_1 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000004105 126.0
BYD1_k127_8933745_2 KaiC - - - 0.0000000000000000000000001887 108.0
BYD1_k127_8946391_0 Major facilitator Superfamily K08223 - - 0.00000000000000000000000000000000000000000000000000000002291 214.0
BYD1_k127_8946391_1 Membrane - - - 0.0000000000000004419 85.0
BYD1_k127_895268_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686,K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 396.0
BYD1_k127_895268_1 MiaB-like tRNA modifying enzyme K18707 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001797 297.0
BYD1_k127_895268_2 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000003055 259.0
BYD1_k127_8969862_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 482.0
BYD1_k127_8969862_1 Cell division protein FtsA K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 450.0
BYD1_k127_8969862_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 343.0
BYD1_k127_8969862_3 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000004913 138.0
BYD1_k127_8969862_4 PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000007966 134.0
BYD1_k127_8984091_0 Peptidase family M20/M25/M40 K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 312.0
BYD1_k127_8984091_1 Luciferase-like monooxygenase - - - 0.00000000000000000000000000638 118.0
BYD1_k127_8992275_0 DNA primase, small subunit K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 600.0
BYD1_k127_8992275_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 537.0
BYD1_k127_8992275_2 belongs to the sigma-70 factor family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 491.0
BYD1_k127_8992275_3 YCII-related domain - - - 0.0000000000000000000000000000000008703 135.0
BYD1_k127_900838_0 domain protein K21147 - 2.7.7.80,2.8.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002261 466.0
BYD1_k127_900838_1 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 403.0
BYD1_k127_900838_2 TIGRFAM SUF system FeS assembly protein, NifU family K04488 - - 0.0000000000000000000000000000000000005023 145.0
BYD1_k127_900838_3 ThiS family K03636 - - 0.000000000000000000005016 100.0
BYD1_k127_900838_4 Flp Fap pilin component K02651 - - 0.0006363 46.0
BYD1_k127_9018101_0 Polysaccharide biosynthesis protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001521 282.0
BYD1_k127_9018101_1 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000002671 257.0
BYD1_k127_903553_0 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000005137 227.0
BYD1_k127_903553_1 D-cysteine desulfhydrase K01505,K05396 - 3.5.99.7,4.4.1.15 0.000000000000000000000000000000002565 139.0
BYD1_k127_903553_2 PFAM ABC transporter K01990 - - 0.0000000000000000000000001112 110.0
BYD1_k127_9038351_0 PFAM peptidase S1 and S6 chymotrypsin Hap K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000003224 150.0
BYD1_k127_9038351_1 His Kinase A (phosphoacceptor) domain K07636 - 2.7.13.3 0.0000000000000000000000000000007063 130.0
BYD1_k127_9042463_0 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 430.0
BYD1_k127_9042463_1 Protein of unknown function (DUF1638) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000407 246.0
BYD1_k127_9042463_2 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000008155 183.0
BYD1_k127_9042463_3 Virulence factor - - - 0.00000000000000000000004846 102.0
BYD1_k127_9073720_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 479.0
BYD1_k127_9079873_0 domain, Protein - - - 0.00000000000000004057 94.0
BYD1_k127_9079873_1 16S rRNA methyltransferase RsmB/F K03500 - 2.1.1.176 0.00000000000751 70.0
BYD1_k127_9083663_0 B12 binding domain K00548 - 2.1.1.13 0.0 1475.0
BYD1_k127_9093182_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 370.0
BYD1_k127_9093182_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000008005 208.0
BYD1_k127_9093182_2 DHHA1 domain K06881 - 3.1.13.3,3.1.3.7 0.00000000000000000000000000000000000000000000418 182.0
BYD1_k127_9093182_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000001181 113.0
BYD1_k127_9093182_4 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000001791 118.0
BYD1_k127_9097275_0 ABC transporter K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 459.0
BYD1_k127_9097275_1 Transport permease protein K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005405 327.0
BYD1_k127_9097275_2 Transport permease protein K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000001127 238.0
BYD1_k127_9097275_3 TrkA-C domain K03499 - - 0.00000000000000000000000000000000000000000000000000000000000009992 221.0
BYD1_k127_9097275_4 uracil-DNA glycosylase K21929 - 3.2.2.27 0.00000000000000000000000000000000000000005657 166.0
BYD1_k127_9097275_5 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 - 2.5.1.74 0.0000000000000000000000000000000000000449 161.0
BYD1_k127_9097275_6 coenzyme F420 binding - - - 0.00000161 56.0
BYD1_k127_9117869_0 Adenosine/AMP deaminase K01488 GO:0003674,GO:0003824,GO:0004000,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006144,GO:0006152,GO:0006154,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009113,GO:0009116,GO:0009119,GO:0009163,GO:0009164,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017144,GO:0018130,GO:0019239,GO:0019438,GO:0019439,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042278,GO:0042440,GO:0042451,GO:0042454,GO:0042455,GO:0042737,GO:0043094,GO:0043096,GO:0043101,GO:0043103,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046085,GO:0046100,GO:0046101,GO:0046102,GO:0046103,GO:0046112,GO:0046128,GO:0046129,GO:0046130,GO:0046148,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0072523,GO:1901135,GO:1901136,GO:1901137,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901657,GO:1901658,GO:1901659 3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 511.0
BYD1_k127_9117869_1 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 338.0
BYD1_k127_9163594_0 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 543.0
BYD1_k127_9163594_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000008856 70.0
BYD1_k127_9165435_0 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000199 240.0
BYD1_k127_9165435_1 WD40-like Beta Propeller Repeat K03641 - - 0.00000000000000000000000002159 126.0
BYD1_k127_9165435_2 Histidine kinase - - - 0.00000000004729 75.0
BYD1_k127_9168610_0 PHP domain protein K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 498.0
BYD1_k127_9168610_1 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000211 170.0
BYD1_k127_9168610_2 diguanylate cyclase - - - 0.00000000000000000000000000000001155 136.0
BYD1_k127_9168610_3 PFAM DNA methylase N-4 N-6 - - - 0.0008513 52.0
BYD1_k127_9169554_0 belongs to the sigma-70 factor family, ECF subfamily K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.0000000000000000000514 96.0
BYD1_k127_9169554_1 amine dehydrogenase activity - - - 0.00000000000004692 85.0
BYD1_k127_9178503_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 357.0
BYD1_k127_9178503_1 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000005219 208.0
BYD1_k127_9178503_2 endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000007314 161.0
BYD1_k127_9178503_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 GO:0000287,GO:0003674,GO:0003824,GO:0003977,GO:0005488,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0016772,GO:0016779,GO:0019134,GO:0022610,GO:0030260,GO:0035635,GO:0040007,GO:0043167,GO:0043169,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044650,GO:0046872,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0070569 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000002713 155.0
BYD1_k127_9178503_4 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000006503 155.0
BYD1_k127_9178503_5 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000002357 134.0
BYD1_k127_9178503_6 PFAM Uncharacterised P-loop hydrolase UPF0079 K06925 - - 0.00000000000000000000000000003221 122.0
BYD1_k127_9178503_7 Mycothiol maleylpyruvate isomerase N-terminal domain - - - 0.0000000000000000000000000006875 123.0
BYD1_k127_9178503_8 Glycoprotease family K14742 GO:0002949,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030312,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0071944,GO:0090304,GO:1901360 - 0.0000000000000004855 90.0
BYD1_k127_9189453_0 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000643 224.0
BYD1_k127_9189453_1 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000007733 216.0
BYD1_k127_9189453_2 PFAM Asparaginase glutaminase K01424 - 3.5.1.1 0.000000000000000000000000000000000000000000001927 175.0
BYD1_k127_9189453_3 Peptidase MA superfamily - - - 0.00000000000000000000000000000000000002122 167.0
BYD1_k127_9189453_4 Bacterial protein of unknown function (DUF881) - - - 0.00000000000000000000005937 108.0
BYD1_k127_9189453_5 Bacterial protein of unknown function (DUF951) - - - 0.0000000000000000006966 91.0
BYD1_k127_9189453_6 Bacterial protein of unknown function (DUF881) - GO:0005575,GO:0005576,GO:0005623,GO:0005886,GO:0005887,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0071944 - 0.000000000000000001897 95.0
BYD1_k127_923271_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 1.604e-290 914.0
BYD1_k127_924982_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000936 309.0
BYD1_k127_924982_1 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:0071944,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85,4.1.3.27 0.0000000000000000000000000000000000000000000002172 173.0
BYD1_k127_9300096_0 PFAM Acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007863 381.0
BYD1_k127_9300096_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008446 346.0
BYD1_k127_9300096_2 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001555 271.0
BYD1_k127_9300096_3 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006264 270.0
BYD1_k127_9300096_4 Dehydrogenase K00074 - 1.1.1.157 0.00000000000000000000000000000000000000000000000000000000000000000000000004506 265.0
BYD1_k127_9300096_5 histidine kinase A domain protein K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000055 265.0
BYD1_k127_9300096_6 Helix-turn-helix domain - - - 0.00004063 56.0
BYD1_k127_93001_0 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003435 353.0
BYD1_k127_93001_1 belongs to the urease gamma subunit family K14048 - 3.5.1.5 0.000000000000000000000000000000000000000000002703 174.0
BYD1_k127_9318507_0 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 504.0
BYD1_k127_9318507_1 Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate K00598 - 2.1.1.144 0.00000000000000000000000000000000000000000000000000000000000000000002993 240.0
BYD1_k127_9318507_2 amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000009106 241.0
BYD1_k127_9318507_3 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000002371 195.0
BYD1_k127_9318507_4 Peptidase family S51 - - - 0.00000000000000000000000000000000002947 145.0
BYD1_k127_9318507_5 Calcineurin-like phosphoesterase K03547 - - 0.0000000000000000000000000000000002845 146.0
BYD1_k127_9318507_6 Probable zinc-ribbon domain - - - 0.0000000000000000000000000008496 119.0
BYD1_k127_9318507_7 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629,K07459 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016020,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000002774 63.0
BYD1_k127_9318507_8 RDD family - - - 0.0000048 58.0
BYD1_k127_9342253_0 Tripartite tricarboxylate transporter TctA family K07793 - - 4.689e-241 753.0
BYD1_k127_9342253_1 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 5.21e-218 694.0
BYD1_k127_9342253_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K03737 - 1.2.7.1 6.765e-196 634.0
BYD1_k127_9342253_3 ABC-type Fe3 transport system permease component K02011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 510.0
BYD1_k127_9342253_4 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 471.0
BYD1_k127_9342253_5 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 431.0
BYD1_k127_9342253_6 Bacterial extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003962 373.0
BYD1_k127_9342253_7 electron transport chain K00347,K03614,K21163 - 1.6.5.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000003291 282.0
BYD1_k127_9342253_8 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000000000000000001061 164.0
BYD1_k127_9342253_9 CBS domain - - - 0.00000000000000000007159 99.0
BYD1_k127_9343127_0 Acyl transferase domain K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000119 263.0
BYD1_k127_9343127_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000591 179.0
BYD1_k127_9343127_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000103 72.0
BYD1_k127_9387135_0 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 556.0
BYD1_k127_9387135_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 424.0
BYD1_k127_9387135_2 DRTGG domain K06873 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003739 255.0
BYD1_k127_9387135_3 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000007741 200.0
BYD1_k127_9387135_4 DegV family - - - 0.00000000000000000000000000000000000000000006522 173.0
BYD1_k127_9387135_5 Branched-chain amino acid permease - - - 0.0000000000000000000000000002834 122.0
BYD1_k127_9387135_6 Alpha beta hydrolase - - - 0.000000000000000000000006676 104.0
BYD1_k127_9387135_7 COG1196 Chromosome segregation ATPases - - - 0.00000000000000000042 96.0
BYD1_k127_9396626_0 D-xylulose 5-phosphate D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 1.193e-299 939.0
BYD1_k127_9396626_1 Multicopper oxidase K22348 - 1.16.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 341.0
BYD1_k127_9396626_2 Coenzyme A transferase K01040 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 291.0
BYD1_k127_9396626_3 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000003583 276.0
BYD1_k127_9396626_4 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000005832 168.0
BYD1_k127_9396626_5 Transglycosylase associated protein - - - 0.0000000000003941 83.0
BYD1_k127_9396626_6 - - - - 0.000000583 61.0
BYD1_k127_9400336_0 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000000000000000000000002916 214.0
BYD1_k127_9400336_1 PFAM Rhomboid family K19225 - 3.4.21.105 0.000000000005645 76.0
BYD1_k127_9400336_2 PFAM TadE family protein - - - 0.00005221 53.0
BYD1_k127_9403412_0 Protein of unknown function (DUF1684) K09164 - - 0.0000000000000000000000000000000000000000000000000000000001372 214.0
BYD1_k127_9403412_1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.000000000000000000000000000000000000000005723 161.0
BYD1_k127_9403412_2 Phage shock protein C, PspC - - - 0.0000004986 53.0
BYD1_k127_9405119_0 Trehalose utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006983 406.0
BYD1_k127_9405119_1 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 313.0
BYD1_k127_9405119_2 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000001116 213.0
BYD1_k127_9405119_3 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.000000000000000000000000000000000000000000006771 164.0
BYD1_k127_9405119_4 Regulates arginine biosynthesis genes K03402 - - 0.000000000000000000000000004664 125.0
BYD1_k127_9405119_5 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0001233 46.0
BYD1_k127_9427943_0 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 383.0
BYD1_k127_9427943_1 Daunorubicin resistance ABC transporter ATP-binding subunit K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 310.0
BYD1_k127_9427943_10 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000006904 113.0
BYD1_k127_9427943_11 - - - - 0.0000001856 60.0
BYD1_k127_9427943_12 - - - - 0.000001638 59.0
BYD1_k127_9427943_13 - - - - 0.0001171 52.0
BYD1_k127_9427943_2 GCN5 family acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002525 268.0
BYD1_k127_9427943_3 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005549 244.0
BYD1_k127_9427943_4 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000001135 219.0
BYD1_k127_9427943_5 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000004446 143.0
BYD1_k127_9427943_6 Flavodoxin domain K00230 - 1.3.5.3 0.000000000000000000000000000000000003404 150.0
BYD1_k127_9427943_7 - - - - 0.0000000000000000000000000000006122 126.0
BYD1_k127_9427943_8 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000004541 120.0
BYD1_k127_9427943_9 transport, permease protein K01992 - - 0.0000000000000000000000001158 116.0
BYD1_k127_946011_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 465.0
BYD1_k127_946011_1 Required for morphogenesis under gluconeogenic growth conditions - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 325.0
BYD1_k127_946011_2 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000008118 211.0
BYD1_k127_946011_3 May be required for sporulation K09762 - - 0.00000000000001788 83.0
BYD1_k127_9511296_0 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0030312,GO:0044464,GO:0071944 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000002127 240.0
BYD1_k127_9511296_1 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - 0.000000000000000000000000000000000000000000000001217 178.0
BYD1_k127_951289_0 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001167 232.0
BYD1_k127_951289_1 PFAM Haloacid dehalogenase domain protein hydrolase - - - 0.0000000000000000000000000000000000000000000006943 179.0
BYD1_k127_951289_2 nUDIX hydrolase - - - 0.00003766 55.0
BYD1_k127_9530085_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 599.0
BYD1_k127_9530085_1 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 347.0
BYD1_k127_9530085_2 - - - - 0.00000000001114 69.0
BYD1_k127_9536896_0 metallocarboxypeptidase activity K05996 - 3.4.17.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 558.0
BYD1_k127_9536896_1 PFAM UvrD REP helicase K03657 GO:0000287,GO:0003674,GO:0003678,GO:0003824,GO:0004386,GO:0005488,GO:0006996,GO:0008094,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0040007,GO:0042623,GO:0043167,GO:0043169,GO:0046872,GO:0051276,GO:0071103,GO:0071840,GO:0140097 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008611 393.0
BYD1_k127_9536896_2 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000008102 233.0
BYD1_k127_9536896_3 Histidine kinase K07642 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000001284 219.0
BYD1_k127_9536896_5 Major facilitator Superfamily - - - 0.00000000005617 75.0
BYD1_k127_9539176_0 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 330.0
BYD1_k127_9539176_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000001328 234.0
BYD1_k127_9539176_2 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000002885 209.0
BYD1_k127_9539176_3 Cytidylate kinase-like family K00760 - 2.4.2.8 0.00000000000000000000000000000000009284 139.0
BYD1_k127_9539176_4 Transcriptional regulator K21600 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000003524 98.0
BYD1_k127_9599643_0 Tetratrico peptide repeat K03802 - 6.3.2.29,6.3.2.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 346.0
BYD1_k127_9599643_1 peptidase K01295 - 3.4.17.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006575 321.0
BYD1_k127_9599643_2 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000005649 135.0
BYD1_k127_9658659_0 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000002077 191.0
BYD1_k127_9658659_1 Cys/Met metabolism PLP-dependent enzyme K11325 - - 0.00000000000000000000000000000000000000000002435 183.0
BYD1_k127_9658659_2 transcriptional regulator - - - 0.000000000000000000000000000000000000005089 163.0
BYD1_k127_9675450_0 Peptidase S15 K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 466.0
BYD1_k127_9675450_1 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 378.0
BYD1_k127_9675450_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 327.0
BYD1_k127_9675450_3 peptidase U61 LD-carboxypeptidase A K01297 - 3.4.17.13 0.00000000000000000000000000000000000000000000000000000000000000002324 234.0
BYD1_k127_9675450_4 Pfam NUDIX domain - - - 0.0000000000000000000000000000000000000000000000009898 201.0
BYD1_k127_9675450_5 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000202 160.0
BYD1_k127_9693517_0 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004475 393.0
BYD1_k127_9693517_1 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008842 388.0
BYD1_k127_9693517_10 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000005177 201.0
BYD1_k127_9693517_11 phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000008552 178.0
BYD1_k127_9693517_12 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000064 171.0
BYD1_k127_9693517_13 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000002442 159.0
BYD1_k127_9693517_14 - - - - 0.00000000000000000000000000000001168 138.0
BYD1_k127_9693517_15 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.000000000000000000001085 108.0
BYD1_k127_9693517_16 endonuclease exonuclease phosphatase - - - 0.00000000000000000000489 105.0
BYD1_k127_9693517_17 transcriptional regulator K03892 - - 0.000000000000000000433 99.0
BYD1_k127_9693517_18 Phosphoglycerate mutase family - - - 0.000000000000002575 83.0
BYD1_k127_9693517_2 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 316.0
BYD1_k127_9693517_3 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004813 298.0
BYD1_k127_9693517_4 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003056 294.0
BYD1_k127_9693517_5 His Kinase A (phosphoacceptor) domain K07654 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001262 301.0
BYD1_k127_9693517_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000002687 260.0
BYD1_k127_9693517_7 converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000004412 243.0
BYD1_k127_9693517_8 PFAM Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000002452 245.0
BYD1_k127_9693517_9 Sporulation and spore germination - - - 0.0000000000000000000000000000000000000000000000000000000008877 221.0
BYD1_k127_9701204_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.573e-229 739.0
BYD1_k127_9701204_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005006 461.0
BYD1_k127_9701204_2 COGs COG3367 conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 312.0
BYD1_k127_9701204_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005474 227.0
BYD1_k127_9701204_4 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K19802 - 5.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000004087 236.0
BYD1_k127_9701204_5 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000001266 163.0
BYD1_k127_9701204_6 transcriptional - - - 0.000000000000000000000000000000000000004022 148.0
BYD1_k127_9701204_7 COG2217 Cation transport ATPase K17686 - 3.6.3.54 0.000000000007728 70.0
BYD1_k127_9701204_8 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.000000000173 66.0
BYD1_k127_9715102_0 Amidase K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 387.0
BYD1_k127_9715102_1 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000311 278.0
BYD1_k127_9715102_2 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000318 243.0
BYD1_k127_9739197_0 ABC transporter - - - 0.0 1117.0
BYD1_k127_9739197_1 alpha/beta hydrolase fold K01259 - 3.4.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001141 297.0
BYD1_k127_9739197_2 Domain of unknown function (DUF4111) K00984 - 2.7.7.47 0.0000000000000000000000000000000000000000000000000000000000000000000000006349 255.0
BYD1_k127_9741254_0 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 309.0
BYD1_k127_9741254_1 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 305.0
BYD1_k127_9741254_2 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 0.000000000000000000000000000000000000001007 151.0
BYD1_k127_977829_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 2.001e-236 754.0
BYD1_k127_977829_1 Isocitrate/isopropylmalate dehydrogenase K00030 - 1.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 496.0
BYD1_k127_977829_10 Methylmalonyl-CoA mutase K01848 - 5.4.99.2 0.0000000000000000000001062 100.0
BYD1_k127_977829_11 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00241 - - 0.000000000000000000004713 104.0
BYD1_k127_977829_12 Succinate dehydrogenase/Fumarate reductase transmembrane subunit K00242 - - 0.00000000000000005149 90.0
BYD1_k127_977829_14 Lysin motif - - - 0.0002133 52.0
BYD1_k127_977829_15 META domain K03668 - - 0.000368 49.0
BYD1_k127_977829_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008443 386.0
BYD1_k127_977829_3 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 336.0
BYD1_k127_977829_4 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 339.0
BYD1_k127_977829_5 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 289.0
BYD1_k127_977829_6 Belongs to the UPF0145 family - - - 0.00000000000000000000000000000000000000000001386 164.0
BYD1_k127_977829_7 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.0000000000000000000000000000000001035 140.0
BYD1_k127_977829_8 Reverse transcriptase-like K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.0000000000000000000000000000006344 137.0
BYD1_k127_977829_9 2'-5' RNA ligase superfamily - - - 0.00000000000000000000000001167 119.0
BYD1_k127_9792471_0 Urocanase C-terminal domain K01712 - 4.2.1.49 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 613.0
BYD1_k127_9792471_1 helix_turn_helix gluconate operon transcriptional repressor K00375 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008246 285.0
BYD1_k127_9809265_0 RNase_H superfamily - - - 1.234e-295 946.0
BYD1_k127_9809265_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 568.0
BYD1_k127_9809265_2 Peptidase dimerisation domain K01438 - 3.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006359 320.0
BYD1_k127_9809265_3 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000007089 252.0
BYD1_k127_9809265_4 Amidinotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004471 241.0
BYD1_k127_9809265_5 Methyltransferase domain - - - 0.000000000000000000000000000000000001373 157.0
BYD1_k127_9809265_6 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.000000000000000000000000000000000004879 147.0
BYD1_k127_9809265_7 amino acid transport - - - 0.00000000000000001441 94.0
BYD1_k127_9810969_0 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 365.0
BYD1_k127_9810969_1 amidohydrolase - - - 0.0000000000004931 75.0
BYD1_k127_9810969_2 Animal haem peroxidase - - - 0.00000006147 61.0
BYD1_k127_9822473_0 SnoaL-like domain K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 338.0
BYD1_k127_9822473_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000001862 181.0
BYD1_k127_9822473_2 DinB superfamily - - - 0.00000000000000000000000000000000000000000007519 174.0
BYD1_k127_9822473_3 Tetratricopeptide repeat - - - 0.0000000000000000000001591 102.0
BYD1_k127_9839600_0 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 439.0
BYD1_k127_9839600_1 Carbon-nitrogen hydrolase - - - 0.0000000000000000005084 91.0
BYD1_k127_9846793_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 371.0
BYD1_k127_9846793_1 Acyl- CoA dehydrogenase type 2 domain - - - 0.00000000000000000000000000000000000000000000000000000002076 200.0
BYD1_k127_9846793_2 ECF sigma factor K03088 - - 0.00000000003407 70.0
BYD1_k127_9846793_3 Helix-turn-helix domain - - - 0.0000001829 62.0
BYD1_k127_9865680_0 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 3.161e-244 764.0
BYD1_k127_9865680_1 Cellulose biosynthesis protein BcsQ K03496 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009295,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000005614 243.0
BYD1_k127_9865680_2 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000002183 173.0
BYD1_k127_9865680_3 Methylcrotonoyl-Coenzyme A carboxylase 1 K01968 - 6.4.1.4 0.000000000001144 78.0
BYD1_k127_9895040_0 involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001722 285.0
BYD1_k127_9895040_1 PFAM oxidoreductase, molybdopterin binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001649 250.0
BYD1_k127_9895040_2 Extradiol ring-cleavage dioxygenase K15777 - - 0.0000000000000000000000000000000000001106 146.0
BYD1_k127_9895040_3 domain protein - - - 0.000000000000000000000000186 115.0
BYD1_k127_9895040_4 F420H(2)-dependent quinone reductase - - - 0.00000000000000000000129 102.0
BYD1_k127_9895040_5 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.00000000000000000648 96.0
BYD1_k127_9914652_0 NADH dehydrogenase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 306.0
BYD1_k127_9914652_1 PFAM blue (type 1) copper domain protein - - - 0.000000000000008969 81.0
BYD1_k127_9914652_2 - - - - 0.00000001613 60.0
BYD1_k127_9923903_0 O-methyltransferase - - - 0.00000000000000000008638 99.0
BYD1_k127_9923903_1 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000001957 74.0
BYD1_k127_9923903_2 acetyltransferase - - - 0.0000000004729 72.0
BYD1_k127_9934345_0 Domain of unknown function (DUF4445) - - - 2.752e-209 661.0
BYD1_k127_9944807_0 PFAM ABC transporter related K01990,K19340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001992 286.0
BYD1_k127_9944807_1 NPCBM-associated, NEW3 domain of alpha-galactosidase - - - 0.000000000000000000000000000000000000000000000004637 183.0
BYD1_k127_9944807_2 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000001102 179.0