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Overview

ID MAG00033
Name BYD1_bin.48
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Planctomycetota
Class Phycisphaerae
Order Tepidisphaerales
Family JAEZED01
Genus JAEZED01
Species
Assembly information
Completeness (%) 56.53
Contamination (%) 0.77
GC content (%) 65.0
N50 (bp) 7,880
Genome size (bp) 1,883,385

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1468

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_100283_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 4.167e-216 690.0
BYD1_k127_100283_1 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008075 313.0
BYD1_k127_100283_10 50S ribosome-binding GTPase - - - 0.00000001187 68.0
BYD1_k127_100283_2 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 306.0
BYD1_k127_100283_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 297.0
BYD1_k127_100283_4 Protein of unknown function (DUF1501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 302.0
BYD1_k127_100283_5 methyltransferase K09846 - 2.1.1.210 0.0000000000000000000000000000000000000001528 151.0
BYD1_k127_100283_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000248 118.0
BYD1_k127_100283_7 cell envelope organization K05807,K08309 - - 0.000000000000000000003699 105.0
BYD1_k127_100283_8 Lipopolysaccharide-assembly - - - 0.00000000000002516 80.0
BYD1_k127_100283_9 50S ribosome-binding GTPase - - - 0.00000000000004195 86.0
BYD1_k127_10044643_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 543.0
BYD1_k127_10044643_1 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000001284 231.0
BYD1_k127_10044643_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00529 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000007415 201.0
BYD1_k127_10044643_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000005911 138.0
BYD1_k127_10044643_4 ACT domain - - - 0.0000000000000000000003344 102.0
BYD1_k127_10044643_5 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.0000000000000000000005915 106.0
BYD1_k127_10044643_6 - - - - 0.00001757 54.0
BYD1_k127_10061583_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002275 441.0
BYD1_k127_10061583_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000684 252.0
BYD1_k127_10061583_2 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000006416 231.0
BYD1_k127_10061583_3 transferase activity, transferring glycosyl groups K21366 - 2.4.1.122 0.0000000000000000000000000007516 130.0
BYD1_k127_10061583_4 Glycosyltransferase like family 2 - - - 0.000000004258 59.0
BYD1_k127_10061583_5 gluconolactonase activity K14274 - - 0.00000006507 66.0
BYD1_k127_10061583_6 O-Glycosyl hydrolase family 30 - - - 0.0001112 56.0
BYD1_k127_10061583_7 Laminin G domain - - - 0.0002542 55.0
BYD1_k127_10131896_0 Di-glucose binding within endoplasmic reticulum - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 606.0
BYD1_k127_10131896_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 537.0
BYD1_k127_10131896_2 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009288 300.0
BYD1_k127_10131896_3 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.00000000000000000000000000000000000000000000000001261 188.0
BYD1_k127_10131896_4 Carbohydrate-binding protein of the ER - - - 0.0000000000000000000000000000000000000009118 173.0
BYD1_k127_10131896_5 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.0000000000000005695 84.0
BYD1_k127_10131896_6 Pkd domain containing protein - - - 0.00000000000001913 89.0
BYD1_k127_10131896_7 helix_turn_helix, Lux Regulon - - - 0.000002143 59.0
BYD1_k127_10134700_0 iron dependent repressor K03709,K09819,K11708 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0010035,GO:0010038,GO:0010043,GO:0016020,GO:0042221,GO:0044464,GO:0050896,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 395.0
BYD1_k127_10134700_1 ATPases associated with a variety of cellular activities K11607,K11710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 384.0
BYD1_k127_10134700_2 COG1108 ABC-type Mn2 Zn2 transport systems permease K11605,K11709 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 344.0
BYD1_k127_10134700_3 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K00772,K03783 - 2.4.2.1,2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 315.0
BYD1_k127_10134700_4 Zinc-uptake complex component A periplasmic K11707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003809 261.0
BYD1_k127_10181616_0 Sulfatase-modifying factor enzyme 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 520.0
BYD1_k127_10181616_1 cell redox homeostasis K00322 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 469.0
BYD1_k127_10181616_2 Erythromycin esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007627 454.0
BYD1_k127_10181616_3 Methyltransferase K18911 - 2.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 312.0
BYD1_k127_10181616_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 299.0
BYD1_k127_10181616_5 carbohydrate transport K02025,K02027 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003592 291.0
BYD1_k127_10181616_6 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.000000000000000000000000000000000000007754 151.0
BYD1_k127_10181616_7 - - - - 0.00000000000002777 87.0
BYD1_k127_10181616_8 helix_turn_helix, Lux Regulon - - - 0.000000002296 62.0
BYD1_k127_10229498_0 AP endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 554.0
BYD1_k127_10229498_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 384.0
BYD1_k127_10229498_2 Polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001799 274.0
BYD1_k127_10229498_3 Protein of unknown function (DUF1361) - - - 0.000000000000000000000000000000000000000000000000000000000003561 217.0
BYD1_k127_10229498_4 - - - - 0.00002618 48.0
BYD1_k127_10266966_0 X-Pro dipeptidyl-peptidase (S15 family) - - - 3.79e-225 723.0
BYD1_k127_10266966_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 554.0
BYD1_k127_10266966_2 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006989 334.0
BYD1_k127_10266966_3 PFAM Metallophosphoesterase K09769 - - 0.0000000000000000000000000000000000000000000000000000000000000000005985 238.0
BYD1_k127_10266966_4 biogenesis protein btpA K06971 - - 0.000000000000000000000000000000000000000000000000000000000000000002373 243.0
BYD1_k127_10266966_5 PFAM Ribonuclease BN-like family K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000001243 233.0
BYD1_k127_10266966_6 PFAM Ribonuclease BN-like family K07058 - - 0.0000000000000000000000000000000000000000000000000000000007137 214.0
BYD1_k127_10266966_7 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000000000000038 218.0
BYD1_k127_10266966_8 Kynurenine--oxoglutarate transaminase - GO:0003674,GO:0003824,GO:0005488,GO:0008144,GO:0008483,GO:0010326,GO:0016740,GO:0016769,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.000000000001151 68.0
BYD1_k127_10266966_9 Protein of unknown function (DUF3299) K09950 - - 0.000000001678 63.0
BYD1_k127_10294166_0 Metallopeptidase family M24 K18829 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009674 273.0
BYD1_k127_10294166_1 ABC transporter, ATP-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000004355 206.0
BYD1_k127_10350984_0 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002251 268.0
BYD1_k127_10350984_1 PFAM glycosyl transferase family 9 K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006311 265.0
BYD1_k127_10350984_2 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000005487 224.0
BYD1_k127_10350984_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000003223 211.0
BYD1_k127_10350984_5 PAP2 superfamily - - - 0.000000002996 62.0
BYD1_k127_10350984_6 protein kinase activity K02848 - - 0.0000002124 61.0
BYD1_k127_10354772_0 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000002866 269.0
BYD1_k127_10354772_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000004548 84.0
BYD1_k127_10354772_2 von Willebrand factor type A domain - - - 0.00000007518 63.0
BYD1_k127_10388755_0 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 439.0
BYD1_k127_10388755_1 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 374.0
BYD1_k127_10388755_2 Aerotolerance regulator N-terminal - - - 0.000000000000000000000000000000000000000000000000000001178 215.0
BYD1_k127_10388755_3 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 0.00000000000000000000000000000000000000000000000000009694 195.0
BYD1_k127_10397650_0 Belongs to the rhamnose isomerase family K01813 - 5.3.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 576.0
BYD1_k127_10397650_1 Class II Aldolase and Adducin N-terminal domain K00001,K01629 - 1.1.1.1,4.1.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 487.0
BYD1_k127_10397650_2 TIGRFAM iron-sulfur cluster binding protein K18929 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007726 421.0
BYD1_k127_10397650_3 Fe-S oxidoreductase K18928 - - 0.00000000000000000004572 92.0
BYD1_k127_10397650_4 LUD domain K00782 - - 0.0000000000000000004905 96.0
BYD1_k127_10404930_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1071.0
BYD1_k127_10404930_1 Domain of unknown function (DUF4932) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001446 269.0
BYD1_k127_10404930_2 DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA K05982 - 3.1.21.7 0.00000000000000000000000000000000000000000000000000008593 193.0
BYD1_k127_10404930_3 Acetyltransferase - - - 0.0000000000000000000000000006014 124.0
BYD1_k127_10559343_0 COG1674 DNA segregation ATPase FtsK SpoIIIE and related K03466 - - 2.681e-198 644.0
BYD1_k127_10559343_1 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000006431 239.0
BYD1_k127_10559343_2 stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001829 232.0
BYD1_k127_10559343_3 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000004037 191.0
BYD1_k127_10559343_4 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000007131 175.0
BYD1_k127_10559343_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000001612 171.0
BYD1_k127_10559343_6 PFAM blue (type 1) copper domain protein - - - 0.0000000000000000000000000000000000001036 149.0
BYD1_k127_10559343_7 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000001782 81.0
BYD1_k127_10559343_8 P-P-bond-hydrolysis-driven protein transmembrane transporter activity K03075 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0006605,GO:0006612,GO:0006613,GO:0006614,GO:0006616,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0022857,GO:0022884,GO:0031522,GO:0032978,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0042886,GO:0042887,GO:0043952,GO:0044464,GO:0045047,GO:0045184,GO:0046907,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061024,GO:0065002,GO:0070727,GO:0070972,GO:0071702,GO:0071705,GO:0071806,GO:0071840,GO:0071944,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:1904680 - 0.0000000000003103 76.0
BYD1_k127_10618811_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 471.0
BYD1_k127_10618811_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000001041 192.0
BYD1_k127_10618811_2 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 GO:0003674,GO:0003824,GO:0004057,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016598,GO:0016740,GO:0016746,GO:0016755,GO:0019538,GO:0019941,GO:0030163,GO:0036211,GO:0043170,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044464,GO:0051603,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 2.3.2.29 0.00000000000000000000000000000000000000000000000000005813 199.0
BYD1_k127_10618811_3 Methyltransferase domain K00570 - 2.1.1.17,2.1.1.71 0.0000000000000000000000000000000000000000000000000008718 195.0
BYD1_k127_10618811_4 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000002735 148.0
BYD1_k127_10618811_5 - - - - 0.00000000000000000000000000001078 125.0
BYD1_k127_10618811_6 PFAM PEGA domain - - - 0.00000000000000000000003835 107.0
BYD1_k127_10618811_7 Peptidase family M28 - - - 0.0000000000007743 72.0
BYD1_k127_10621996_0 Tetratricopeptide repeat - - - 8.656e-218 690.0
BYD1_k127_10621996_1 ATP-dependent helicase K03579 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 597.0
BYD1_k127_10621996_10 rna polymerase sigma-54 factor K03092 - - 0.00000000000000000000000000000000000001842 145.0
BYD1_k127_10621996_11 - - - - 0.00000000000000000000000000000005825 134.0
BYD1_k127_10621996_12 - - - - 0.0000000000000000000000000000002197 134.0
BYD1_k127_10621996_13 ABC 3 transport family K09819 - - 0.00000000000000001561 94.0
BYD1_k127_10621996_14 PFAM Methyltransferase type 11 - - - 0.0000000000001311 79.0
BYD1_k127_10621996_15 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000038 74.0
BYD1_k127_10621996_16 Zn-ribbon-containing possibly RNA-binding protein and truncated derivatives - - - 0.000003077 57.0
BYD1_k127_10621996_17 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.00002396 53.0
BYD1_k127_10621996_2 ATP dependent DNA ligase C terminal region K10747 GO:0000287,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016874,GO:0016886,GO:0022616,GO:0030312,GO:0033554,GO:0034641,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:0140097,GO:1901360,GO:1901576 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003257 429.0
BYD1_k127_10621996_3 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007372 386.0
BYD1_k127_10621996_4 Bacterial Ig-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 372.0
BYD1_k127_10621996_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 354.0
BYD1_k127_10621996_6 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001043 280.0
BYD1_k127_10621996_7 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000723 257.0
BYD1_k127_10621996_8 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000002571 239.0
BYD1_k127_10621996_9 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000001163 213.0
BYD1_k127_10622459_0 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006217 402.0
BYD1_k127_10622459_1 4Fe-4S double cluster binding domain K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009668 273.0
BYD1_k127_10622459_10 Molecular chaperone DnaJ - - - 0.00000006143 59.0
BYD1_k127_10622459_2 MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003913 267.0
BYD1_k127_10622459_3 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000129 255.0
BYD1_k127_10622459_4 aminopeptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000002195 223.0
BYD1_k127_10622459_5 Peptidase family M50 - - - 0.0000000000000000000000000000000000005284 147.0
BYD1_k127_10622459_6 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000001441 84.0
BYD1_k127_10622459_7 GGDEF domain - - - 0.00000000000001341 88.0
BYD1_k127_10622459_8 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000124 75.0
BYD1_k127_10622459_9 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.0000000004482 72.0
BYD1_k127_10687300_0 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 355.0
BYD1_k127_10687300_1 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.000000000000000000000000000000000000005895 151.0
BYD1_k127_10687300_2 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.000000000000000000000000000000000000008263 149.0
BYD1_k127_10687300_3 TIGRFAM Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily - - - 0.00000000000000000000000000000000002044 146.0
BYD1_k127_10687300_4 regulation of single-species biofilm formation K02342,K03763,K13573 - 2.7.7.7 0.00000000000000000000000000000001316 140.0
BYD1_k127_10693782_0 von Willebrand factor (vWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006292 328.0
BYD1_k127_10693782_1 oxidoreductase activity K21000 - - 0.00000000000000000000000000001609 135.0
BYD1_k127_10721185_0 Diguanylate cyclase K21084 - 2.7.7.65 0.0000000000000000000000000000000000000000000000006343 191.0
BYD1_k127_10721185_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000114 191.0
BYD1_k127_10721185_2 PFAM regulatory protein LuxR - - - 0.0000000000001232 73.0
BYD1_k127_10721185_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000002777 79.0
BYD1_k127_1072746_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 566.0
BYD1_k127_1072746_1 TIGRFAM ribonuclease, Rne Rng family K08300 - 3.1.26.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 467.0
BYD1_k127_1072746_10 TIGRFAM phosphocarrier, HPr family K11189 - - 0.00000000000003779 76.0
BYD1_k127_1072746_11 STAS domain - - - 0.00000000000008637 76.0
BYD1_k127_1072746_12 Helix-hairpin-helix motif K02237 - - 0.00000001595 62.0
BYD1_k127_1072746_13 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006417,GO:0006448,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015935,GO:0017148,GO:0019222,GO:0022626,GO:0022627,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0032991,GO:0034248,GO:0034249,GO:0043021,GO:0043022,GO:0043024,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0045900,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:1990904,GO:2000112,GO:2000113 - 0.00000002474 62.0
BYD1_k127_1072746_15 peptidyl-tyrosine sulfation - - - 0.0007828 53.0
BYD1_k127_1072746_2 PFAM Type II secretion system protein E - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006553 381.0
BYD1_k127_1072746_3 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002109 361.0
BYD1_k127_1072746_4 PFAM glycoside hydrolase, family 10 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 311.0
BYD1_k127_1072746_5 folylpolyglutamate synthase K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000365 240.0
BYD1_k127_1072746_6 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000001633 226.0
BYD1_k127_1072746_7 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000009396 173.0
BYD1_k127_1072746_8 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02768,K02806 - 2.7.1.202 0.00000000000000000000000000000000276 134.0
BYD1_k127_1072746_9 Protein of unknown function (DUF502) - - - 0.0000000000000000000000000000002967 137.0
BYD1_k127_10769468_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.412e-274 856.0
BYD1_k127_10769468_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001622 287.0
BYD1_k127_10769468_2 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000000000000000000000000004288 201.0
BYD1_k127_10769468_3 PFAM Aminotransferase class I and II K00812,K10907 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000001362 188.0
BYD1_k127_10769468_4 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.00000000000000000000000000000000000000000001227 174.0
BYD1_k127_10769468_5 Protein of unknown function (DUF1207) - - - 0.000000000000000000000000000000005184 147.0
BYD1_k127_1093290_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 403.0
BYD1_k127_1093290_1 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009911 287.0
BYD1_k127_1093290_2 SpoIVB peptidase S55 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000971 257.0
BYD1_k127_1093290_3 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000000000006323 242.0
BYD1_k127_1093290_4 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.0000000000000000000000000000000000000000000000000000000003776 211.0
BYD1_k127_1093290_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.00000000000000000000000000000000000000000000000000000002813 205.0
BYD1_k127_1093290_6 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000003237 172.0
BYD1_k127_1093290_7 - - - - 0.000000000000000000000000000000000000000000000396 190.0
BYD1_k127_1093290_8 Belongs to the UPF0354 family - - - 0.0000000000000001468 83.0
BYD1_k127_1103331_0 Bacterial alpha-L-rhamnosidase C-terminal domain K05989 - 3.2.1.40 5.371e-212 677.0
BYD1_k127_1103331_1 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003222 523.0
BYD1_k127_1103331_2 COG1070 Sugar (pentulose and hexulose) K00848 - 2.7.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 455.0
BYD1_k127_1103331_3 ATPases associated with a variety of cellular activities K10441 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 379.0
BYD1_k127_1103331_4 ABC transporter K10559 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 352.0
BYD1_k127_1103331_5 Branched-chain amino acid transport system / permease component K10440,K17203 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 315.0
BYD1_k127_1103331_6 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002844 263.0
BYD1_k127_1103331_7 Belongs to the binding-protein-dependent transport system permease family K10561 - - 0.00000000000000000000000000000000000000000000000000000000000000000004297 244.0
BYD1_k127_1103331_8 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000001134 188.0
BYD1_k127_11062644_0 Utp--glucose-1-phosphate uridylyltransferase K00972,K11442 - 2.7.7.23,2.7.7.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 500.0
BYD1_k127_11062644_1 acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 395.0
BYD1_k127_11062644_2 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000004971 241.0
BYD1_k127_11062644_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01928,K01929,K15792 - 6.3.2.10,6.3.2.13 0.000000000000000000000000000000000000000000000504 174.0
BYD1_k127_11062644_4 Resolvase - - - 0.00001324 51.0
BYD1_k127_11062644_5 tail specific protease K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009653,GO:0009987,GO:0016787,GO:0019538,GO:0023052,GO:0030154,GO:0030288,GO:0030313,GO:0030435,GO:0031975,GO:0032502,GO:0033218,GO:0034641,GO:0042277,GO:0042597,GO:0042802,GO:0042803,GO:0043170,GO:0043603,GO:0043900,GO:0043902,GO:0043934,GO:0044237,GO:0044238,GO:0044464,GO:0046983,GO:0048518,GO:0048522,GO:0048646,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0140096,GO:1900190,GO:1900192,GO:1901564 3.4.21.102 0.0008381 44.0
BYD1_k127_11162261_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family K03309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 397.0
BYD1_k127_11162261_1 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 347.0
BYD1_k127_11162261_2 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.000000000000000000000000000000000000000000000000000000000000000000006781 246.0
BYD1_k127_11162261_3 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000002693 182.0
BYD1_k127_11162261_4 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000436 162.0
BYD1_k127_11162261_5 - - - - 0.00000000000004493 79.0
BYD1_k127_11162261_6 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00000000002023 65.0
BYD1_k127_11167549_0 glycosyl transferase family K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 535.0
BYD1_k127_11167549_1 Methyltransferase type 11 K03892 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 317.0
BYD1_k127_11167549_2 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000098,GO:0000166,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009087,GO:0009116,GO:0009119,GO:0009987,GO:0016020,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0019899,GO:0022610,GO:0030260,GO:0030312,GO:0033353,GO:0034641,GO:0035375,GO:0035635,GO:0036094,GO:0040007,GO:0042278,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0044403,GO:0044406,GO:0044409,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0044650,GO:0046085,GO:0046128,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0048037,GO:0050662,GO:0051186,GO:0051287,GO:0051701,GO:0051704,GO:0051806,GO:0051828,GO:0055086,GO:0070403,GO:0071704,GO:0071944,GO:0072521,GO:0097159,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606,GO:1901657 3.3.1.1 0.000000000000000000000000000000000000000000000000000000002861 203.0
BYD1_k127_11167549_3 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000009304 177.0
BYD1_k127_11216816_0 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00002268 54.0
BYD1_k127_11222279_0 Tripartite tricarboxylate transporter TctA family K07793 - - 1.314e-262 816.0
BYD1_k127_11222279_1 Involved in arsenical resistance. Thought to form the channel of an arsenite pump - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 604.0
BYD1_k127_11222279_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 484.0
BYD1_k127_11222279_3 PFAM Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 444.0
BYD1_k127_11222279_4 Belongs to the TPP enzyme family K01577 - 4.1.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 303.0
BYD1_k127_11222279_5 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001288 271.0
BYD1_k127_11222279_6 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000000000000007505 160.0
BYD1_k127_11222279_7 Universal stress protein family - - - 0.000000000000000000000000000007761 123.0
BYD1_k127_11224691_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 392.0
BYD1_k127_11224691_1 PFAM NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008497 375.0
BYD1_k127_11224691_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000307 260.0
BYD1_k127_11224691_3 Tetratricopeptide repeat - - - 0.0000000002537 74.0
BYD1_k127_11224691_4 Required for chromosome condensation and partitioning K03529 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.0003696 50.0
BYD1_k127_11250564_0 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 GO:0003674,GO:0003824,GO:0006139,GO:0006220,GO:0006221,GO:0006231,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009157,GO:0009162,GO:0009165,GO:0009176,GO:0009177,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019438,GO:0019637,GO:0019692,GO:0032259,GO:0034641,GO:0034654,GO:0042083,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046073,GO:0046385,GO:0046483,GO:0050797,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002016 406.0
BYD1_k127_11250564_1 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000116 248.0
BYD1_k127_11250564_2 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000269 224.0
BYD1_k127_11250564_3 SMART Protein phosphatase K07315 - 3.1.3.3 0.000000000002777 79.0
BYD1_k127_11250564_4 Sodium/calcium exchanger protein K07301 - - 0.00007752 54.0
BYD1_k127_112974_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate - - - 0.0 1048.0
BYD1_k127_112974_1 PFAM Zinc carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 591.0
BYD1_k127_11310560_0 Thermophilic metalloprotease (M29) K19689 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003047 400.0
BYD1_k127_11310560_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000001665 89.0
BYD1_k127_113403_0 RING finger protein - - - 0.0000000000000000000000000000000000000000000000000000006847 220.0
BYD1_k127_113403_1 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.0000000000000000000001016 100.0
BYD1_k127_113403_2 PFAM von Willebrand factor type A - - - 0.0000000004703 70.0
BYD1_k127_113403_3 ubiE/COQ5 methyltransferase family - - - 0.000000004479 66.0
BYD1_k127_11355583_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.428e-227 725.0
BYD1_k127_11355583_1 ATPase related to the helicase subunit of the Holliday junction resolvase K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002072 491.0
BYD1_k127_11355583_2 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002352 388.0
BYD1_k127_11355583_3 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 346.0
BYD1_k127_11355583_4 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000152 268.0
BYD1_k127_11355583_5 response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002386 262.0
BYD1_k127_11355583_6 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000001508 198.0
BYD1_k127_11355583_7 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0030272,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.000000000000000000000000004147 121.0
BYD1_k127_11355583_8 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000001549 117.0
BYD1_k127_11355583_9 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02481,K02667 - - 0.000000000000006743 80.0
BYD1_k127_11413204_0 Fumarate reductase flavoprotein C-term K00239 - 1.3.5.1,1.3.5.4 8.814e-305 942.0
BYD1_k127_11413204_1 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 340.0
BYD1_k127_11413204_10 - - - - 0.000000006751 61.0
BYD1_k127_11413204_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000003918 270.0
BYD1_k127_11413204_3 2Fe-2S iron-sulfur cluster binding domain K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000004053 250.0
BYD1_k127_11413204_4 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000002524 221.0
BYD1_k127_11413204_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000004792 218.0
BYD1_k127_11413204_6 DNA mismatch repair protein MutT K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000008336 172.0
BYD1_k127_11413204_7 COG4747 ACT domain-containing protein - - - 0.000000000000000000000000000004207 125.0
BYD1_k127_11413204_8 - - - - 0.000000000000000000000000000006986 125.0
BYD1_k127_11413204_9 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000004985 88.0
BYD1_k127_11567944_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 9.967e-267 843.0
BYD1_k127_11567944_1 Quinolinate phosphoribosyl transferase, N-terminal domain K00767 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000144 253.0
BYD1_k127_11567944_2 Pfam:N_methyl_2 K02456 - - 0.000000000000000000004411 101.0
BYD1_k127_11567944_3 - - - - 0.0003284 46.0
BYD1_k127_11598883_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 456.0
BYD1_k127_11598883_1 tRNA synthetase class II core domain (G, H, P, S and T) K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 379.0
BYD1_k127_11598883_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 340.0
BYD1_k127_11598883_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000004144 247.0
BYD1_k127_11598883_4 Domain of unknown function (DUF1844) - - - 0.00000003136 61.0
BYD1_k127_1160977_0 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 343.0
BYD1_k127_1160977_1 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 291.0
BYD1_k127_1160977_2 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 GO:0002097,GO:0002100,GO:0006139,GO:0006382,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016553,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 3.5.4.33 0.0000000000000000000000000000000000000000000000000001727 192.0
BYD1_k127_1160977_3 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000002446 192.0
BYD1_k127_1160977_4 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000004221 94.0
BYD1_k127_1160977_5 NifU-like domain - - - 0.00000000000000007525 85.0
BYD1_k127_11614219_0 Amidase K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 428.0
BYD1_k127_11614219_1 serine-type peptidase activity K06978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 388.0
BYD1_k127_11614219_2 Zn-dependent protease contains TPR repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009391 256.0
BYD1_k127_11614219_3 synthase K01737 - 4.1.2.50,4.2.3.12 0.000000000000000000000000000000000001018 150.0
BYD1_k127_11662723_0 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000001231 219.0
BYD1_k127_11662723_1 Permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000006602 220.0
BYD1_k127_11668601_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.25e-224 722.0
BYD1_k127_11668601_1 of the beta-lactamase superfamily I K06167 - 3.1.4.55 0.000000000000000000000000000000000000000000000000000000000000000000952 240.0
BYD1_k127_11668601_2 Methyltransferase type 12 - - - 0.000000000000000000000000004502 121.0
BYD1_k127_11668934_0 PFAM Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 528.0
BYD1_k127_11668934_1 NAT, N-acetyltransferase, of N-acetylglutamate synthase K12659,K22478 - 1.2.1.38,2.3.1.1,2.7.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004438 467.0
BYD1_k127_11668934_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006526 355.0
BYD1_k127_11668934_3 AcrB/AcrD/AcrF family K03296 - - 0.00000000000000000000000000000000000000000000000000000000000000000003005 235.0
BYD1_k127_11668934_4 NAT, N-acetyltransferase, of N-acetylglutamate synthase K12659,K22478 - 1.2.1.38,2.3.1.1,2.7.2.8 0.0000000000000000000000002418 111.0
BYD1_k127_11668934_5 Subtilase family K14743 - - 0.000000000000000006134 96.0
BYD1_k127_11668934_6 protein conserved in bacteria K09955 - - 0.000297 51.0
BYD1_k127_11721682_0 Polysulphide reductase K00185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 473.0
BYD1_k127_11721682_1 Protein of unknown function (DUF3341) - - - 0.000000000000000000000000000000000000000000000007542 179.0
BYD1_k127_11721682_2 Protein of unknown function (DUF3341) - - - 0.00000000000000000000000000000000000000000001159 175.0
BYD1_k127_11721682_3 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.000000000000001719 85.0
BYD1_k127_11751984_0 citrate synthase K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 491.0
BYD1_k127_11751984_1 DNA polymerase Ligase (LigD) K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 312.0
BYD1_k127_11751984_2 ATP dependent DNA ligase domain K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000002123 243.0
BYD1_k127_11751984_3 Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate K07106 - 4.2.1.126 0.000000000000000000000000000000000000000000000000000003887 196.0
BYD1_k127_11751984_4 Ku70/Ku80 beta-barrel domain - - - 0.00000000000000000000000000000000000000000000000001552 193.0
BYD1_k127_11751984_5 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000003596 181.0
BYD1_k127_11751984_6 protein conserved in bacteria K09928 - - 0.0000000000000000000000000003931 124.0
BYD1_k127_11751984_7 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03118 - - 0.000000000000000000000003251 117.0
BYD1_k127_11763379_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 485.0
BYD1_k127_11763379_1 membrane-associated Zn-dependent proteases 1 K16922 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001868 453.0
BYD1_k127_11763379_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000002274 79.0
BYD1_k127_11793239_0 ABC-type multidrug transport system ATPase K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 377.0
BYD1_k127_11793239_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00261 - 1.4.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 330.0
BYD1_k127_11793239_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007637 286.0
BYD1_k127_11793239_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000001519 185.0
BYD1_k127_11793239_4 MazG nucleotide pyrophosphohydrolase domain - - - 0.00000000000000000000004508 101.0
BYD1_k127_11793239_5 - - - - 0.000001536 62.0
BYD1_k127_11814151_0 ABC-type sugar transport system, ATPase component K02056 - 3.6.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 566.0
BYD1_k127_11814151_1 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 396.0
BYD1_k127_11814151_2 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 362.0
BYD1_k127_11814151_3 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 308.0
BYD1_k127_11814151_4 Belongs to the binding-protein-dependent transport system permease family K02057,K10440 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003213 305.0
BYD1_k127_11814151_5 oxidoreductase activity K07114 - - 0.00000000000000000000008356 98.0
BYD1_k127_11831892_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001557 280.0
BYD1_k127_11831892_1 - - - - 0.00000000000000000000000000000000001634 148.0
BYD1_k127_11831892_2 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) - - - 0.0000004049 57.0
BYD1_k127_11831892_3 Cupin 2, conserved barrel domain protein - - - 0.00002606 52.0
BYD1_k127_11831892_4 antisigma factor binding K04749 - - 0.000119 49.0
BYD1_k127_11916710_0 NAD(P) transhydrogenase alpha subunit K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000599 608.0
BYD1_k127_11916710_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007283 565.0
BYD1_k127_11916710_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009396 483.0
BYD1_k127_11916710_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000003462 266.0
BYD1_k127_11916710_4 Belongs to the N(4) N(6)-methyltransferase family - - - 0.0000000000009104 69.0
BYD1_k127_12037738_0 Belongs to the PEP-utilizing enzyme family K01006 - 2.7.9.1 0.0 1065.0
BYD1_k127_12037738_1 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000237 89.0
BYD1_k127_12037738_2 Belongs to the GSP D family K02453 - - 0.00003553 56.0
BYD1_k127_12068816_0 Secretion system protein K02283 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 511.0
BYD1_k127_12068816_1 Belongs to the GSP D family K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000358 305.0
BYD1_k127_12068816_2 type II secretion system protein K12510 - - 0.000000000000000000000000000000000000000000000000006055 194.0
BYD1_k127_12068816_3 Secretion system protein K12511 - - 0.0000000000000000000000000000000000000000008095 173.0
BYD1_k127_12068816_4 AAA domain K02282 - - 0.00000000000000000000000000000000000001807 159.0
BYD1_k127_12068816_5 Flp pilus assembly protein RcpC/CpaB K02279 - - 0.00000000008827 71.0
BYD1_k127_12068816_6 PFAM AMP-dependent synthetase and ligase - - - 0.000005961 59.0
BYD1_k127_12070504_0 Glycosyltransferase like family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002987 368.0
BYD1_k127_12070504_1 PFAM Glycosyl transferase family 2 K20534 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 335.0
BYD1_k127_12070504_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 291.0
BYD1_k127_12070504_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000005032 156.0
BYD1_k127_12070504_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000002922 151.0
BYD1_k127_12070504_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000005748 85.0
BYD1_k127_12070504_6 O-antigen ligase like membrane protein - - - 0.0000000000004331 82.0
BYD1_k127_12101719_0 Beta-L-arabinofuranosidase, GH127 - - - 5.019e-230 730.0
BYD1_k127_12101719_1 Acetyl-coenzyme A synthetase N-terminus - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 585.0
BYD1_k127_12101719_2 Glycolate oxidase subunit K00104 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 424.0
BYD1_k127_12101719_3 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00000000000000000000000000000000000000000000000000000263 198.0
BYD1_k127_12101719_4 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000001051 183.0
BYD1_k127_1211768_0 Cytochrome C assembly protein - - - 0.000000000000000000000000000001223 139.0
BYD1_k127_1211768_1 positive regulation of growth rate - - - 0.0000000003144 63.0
BYD1_k127_1211768_2 cytochrome c biogenesis protein - - - 0.0003031 54.0
BYD1_k127_12148777_0 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 373.0
BYD1_k127_12148777_1 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000004822 191.0
BYD1_k127_12148777_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000004567 130.0
BYD1_k127_12148777_3 Glycosyltransferase family 9 (heptosyltransferase) K02841,K02843 - - 0.000000000000000000000002639 121.0
BYD1_k127_12148777_4 macromolecule localization K01992,K09690 - - 0.000000000000007401 79.0
BYD1_k127_12156477_0 Glutamine synthetase type III K01915 - 6.3.1.2 1.538e-302 947.0
BYD1_k127_12156477_1 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K18285 - 2.5.1.120 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 363.0
BYD1_k127_12156477_2 COG0382 4-hydroxybenzoate polyprenyltransferase and related K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000002269 229.0
BYD1_k127_12156477_3 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00000000000000000000000000000000000000000000000000000005283 202.0
BYD1_k127_12156477_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000007893 207.0
BYD1_k127_12156477_5 peroxiredoxin activity K03564 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 1.11.1.15 0.0000000000000008331 78.0
BYD1_k127_12156477_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000001245 73.0
BYD1_k127_12158918_0 - - - - 0.0000000000003999 71.0
BYD1_k127_12158918_1 Glucose / Sorbosone dehydrogenase - - - 0.00000001517 65.0
BYD1_k127_122590_0 PFAM chorismate K01665 - 2.6.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000001024 264.0
BYD1_k127_122590_1 COG0265 Trypsin-like serine proteases, typically periplasmic K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000001182 191.0
BYD1_k127_122590_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826,K02619 - 2.6.1.42,4.1.3.38 0.0000000000000000000000000000000000000000000003518 178.0
BYD1_k127_1247587_0 Belongs to the glycosyl hydrolase 30 family K01201,K15924 - 3.2.1.136,3.2.1.45 0.0000000000000000000005024 113.0
BYD1_k127_1247587_1 ankyrin repeat K06867 - - 0.00000001872 68.0
BYD1_k127_1248363_0 Nucleotidyl transferase K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 327.0
BYD1_k127_1248363_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005062 327.0
BYD1_k127_1248363_2 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000292 248.0
BYD1_k127_1248363_3 ADP-glyceromanno-heptose 6-epimerase activity K03274 GO:0000166,GO:0000271,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008712,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016853,GO:0016854,GO:0016857,GO:0033692,GO:0034637,GO:0034645,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0048037,GO:0050661,GO:0050662,GO:0070401,GO:0071704,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901363,GO:1901576,GO:1903509 5.1.3.20 0.00000000000000000000000000000000000000000000000000000000001152 215.0
BYD1_k127_1252638_0 PFAM Metal-dependent phosphohydrolase, HD K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006888 372.0
BYD1_k127_1252638_1 Phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003114 329.0
BYD1_k127_1252638_2 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005618,GO:0005623,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0030312,GO:0034641,GO:0034654,GO:0040007,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000007321 128.0
BYD1_k127_1252638_3 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000001011 94.0
BYD1_k127_1286172_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01535,K01537 - 3.6.3.6,3.6.3.8 0.0 1033.0
BYD1_k127_1286172_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 399.0
BYD1_k127_1286172_2 COG0530 Ca2 Na antiporter K07301 - - 0.000000000000000000000000000000000000000000000000000000000002359 221.0
BYD1_k127_132851_0 MafB19-like deaminase K01485 - 3.5.4.1 0.0000000000000000000000000000000000000000000000000000006405 202.0
BYD1_k127_132851_1 Specifically methylates the N7 position of a guanine in 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000003511 145.0
BYD1_k127_132851_4 UbiA prenyltransferase family K03179 - 2.5.1.39 0.0000000000001997 81.0
BYD1_k127_132851_5 mRNA catabolic process K06950 - - 0.0000000002722 62.0
BYD1_k127_1376040_0 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 435.0
BYD1_k127_1376040_1 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 310.0
BYD1_k127_1376040_2 Belongs to the MlaE permease family K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002232 267.0
BYD1_k127_1376040_3 nuclear-transcribed mRNA catabolic process, no-go decay - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000475 270.0
BYD1_k127_1376040_4 protein homotetramerization - - - 0.0000000000000000000000000000000000006376 151.0
BYD1_k127_1376040_5 ABC-type transport system involved in resistance to organic solvents periplasmic component K02067 - - 0.00000000000000000000000000000001795 141.0
BYD1_k127_1376040_6 Ribosomal protein L31 K02909 - - 0.0000000000000000000000000000003314 126.0
BYD1_k127_1376040_7 Putative polyhydroxyalkanoic acid system protein (PHA_gran_rgn) - - - 0.0000000000000000005342 90.0
BYD1_k127_1376040_8 von Willebrand factor (vWF) type A domain - - - 0.00000000001468 68.0
BYD1_k127_1429590_0 phospho-2-dehydro-3-deoxyheptonate aldolase K03856 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 407.0
BYD1_k127_1429590_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 302.0
BYD1_k127_1429590_2 FAD binding domain - - - 0.000000000000000000000007504 115.0
BYD1_k127_1429590_3 Bacterial PH domain - - - 0.000000001042 68.0
BYD1_k127_1436390_0 arginine decarboxylase activity K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000001854 211.0
BYD1_k127_1436390_1 AMP binding - - - 0.0000000000000000000000000003954 118.0
BYD1_k127_1436390_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.0000008931 52.0
BYD1_k127_1436390_4 DNA polymerase III, delta' subunit K02340 - 2.7.7.7 0.000002799 53.0
BYD1_k127_1442235_0 Aldo Keto reductase - GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0004033,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0008076,GO:0008150,GO:0008152,GO:0009117,GO:0009898,GO:0009987,GO:0010959,GO:0012505,GO:0012506,GO:0015459,GO:0016020,GO:0016021,GO:0016192,GO:0016247,GO:0016491,GO:0016614,GO:0016616,GO:0019362,GO:0019637,GO:0019897,GO:0019898,GO:0030141,GO:0030424,GO:0030659,GO:0030667,GO:0031090,GO:0031224,GO:0031226,GO:0031234,GO:0031410,GO:0031982,GO:0032879,GO:0032880,GO:0032940,GO:0032991,GO:0033267,GO:0034641,GO:0034702,GO:0034703,GO:0034705,GO:0034762,GO:0034765,GO:0035579,GO:0036230,GO:0042119,GO:0042581,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043266,GO:0043269,GO:0043299,GO:0043312,GO:0044224,GO:0044237,GO:0044238,GO:0044281,GO:0044304,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045055,GO:0045321,GO:0046483,GO:0046496,GO:0046903,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051179,GO:0051186,GO:0051234,GO:0055086,GO:0055114,GO:0060341,GO:0065007,GO:0065009,GO:0070820,GO:0070821,GO:0070995,GO:0071704,GO:0071944,GO:0072524,GO:0097458,GO:0097708,GO:0098552,GO:0098562,GO:0098588,GO:0098772,GO:0098796,GO:0098797,GO:0098805,GO:0099106,GO:0099503,GO:0120025,GO:0120038,GO:1901360,GO:1901379,GO:1901564,GO:1902495,GO:1903827,GO:1904062,GO:1990031,GO:1990351,GO:2000008 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 392.0
BYD1_k127_1442235_1 PFAM short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 355.0
BYD1_k127_1442235_2 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 319.0
BYD1_k127_1442235_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002567 273.0
BYD1_k127_1442235_4 Domain of unknown function (DUF4112) - - - 0.00000000000000000000001661 104.0
BYD1_k127_1442235_5 to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa K02507,K02666 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006139,GO:0006259,GO:0006308,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0015976,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 - 0.0000000000000000000004993 111.0
BYD1_k127_1459126_0 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 441.0
BYD1_k127_1459126_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 421.0
BYD1_k127_1459126_2 Prenyltransferase and squalene oxidase repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002125 274.0
BYD1_k127_1459126_3 - - - - 0.00000000000000000000000000000000000000000000000005189 185.0
BYD1_k127_1459126_4 - - - - 0.0000000000000000000000000000000003672 138.0
BYD1_k127_1459126_5 Peptidase m28 - - - 0.0000000000002003 73.0
BYD1_k127_1459126_6 MORN repeat variant - - - 0.000004855 59.0
BYD1_k127_1459126_7 carbohydrate binding - - - 0.00000703 58.0
BYD1_k127_147046_0 Type II secretory pathway component PulF K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000841 426.0
BYD1_k127_147046_1 Hemolysin-type calcium-binding repeat (2 copies) K01183 - 3.2.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 304.0
BYD1_k127_147046_2 Zn_pept - - - 0.00000000000000000000000000008223 133.0
BYD1_k127_147046_3 Protein of unknown function (DUF1559) - - - 0.00004608 55.0
BYD1_k127_147046_4 Pfam:N_methyl_2 - - - 0.0001131 54.0
BYD1_k127_1510646_0 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016226,GO:0018282,GO:0018283,GO:0019538,GO:0022607,GO:0030091,GO:0031163,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051186,GO:0071704,GO:0071840,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000122 221.0
BYD1_k127_1510646_1 Bacterial Ig-like domain - - - 0.0000000000000000000000000000000000000000000000000000000003211 210.0
BYD1_k127_1510646_2 Alginate export - - - 0.0000000000000000000000000000000000000000000862 173.0
BYD1_k127_1510646_3 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000001906 128.0
BYD1_k127_1510646_4 peroxiredoxin activity K01607 - 4.1.1.44 0.000000000000000000001502 99.0
BYD1_k127_1538251_0 Zinc carboxypeptidase K01278 - 3.4.14.5 0.0 1078.0
BYD1_k127_1538251_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 294.0
BYD1_k127_1538251_2 TIGRFAM RarD protein, DMT superfamily transporter K05786 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0016021,GO:0031224,GO:0044425,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000008538 233.0
BYD1_k127_1538251_3 Cell division protein 48 (CDC48) N-terminal domain K13525 - - 0.0000000000000000000000000000000000000000000000000000000000007702 228.0
BYD1_k127_1538251_4 Protein of unknown function (DUF456) K09793 - - 0.00000000000000000007828 96.0
BYD1_k127_1538251_5 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0009216 52.0
BYD1_k127_1539851_0 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 418.0
BYD1_k127_1539851_1 Glucose / Sorbosone dehydrogenase K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 428.0
BYD1_k127_1539851_2 Protein of unknown function (DUF1572) - - - 0.0000000000000000000000000000000001364 139.0
BYD1_k127_1539851_3 Parallel beta-helix repeats - - - 0.0000000000000000001863 92.0
BYD1_k127_1539851_4 Putative Flp pilus-assembly TadE/G-like - - - 0.00002259 57.0
BYD1_k127_1557950_0 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000314 362.0
BYD1_k127_1557950_1 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000001682 223.0
BYD1_k127_1557950_2 amine dehydrogenase activity K01173 - - 0.000000000000000000000000000000000000000000000000000000000008667 224.0
BYD1_k127_1557950_3 cobalamin binding - - - 0.000000000000000000000000000000000000001614 158.0
BYD1_k127_1557950_4 conserved protein (COG2071) K09166 - - 0.00000000000000000000000000000000001072 142.0
BYD1_k127_1557950_5 - - - - 0.000000000000000000000003741 105.0
BYD1_k127_1613005_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 4.863e-287 927.0
BYD1_k127_1613005_1 Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na( ) movement across the membrane K15987 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 289.0
BYD1_k127_1613005_2 Tyrosine phosphatase family - - - 0.000000000000000000000000000000000000000000000000000000000000003927 230.0
BYD1_k127_1613005_3 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000008339 149.0
BYD1_k127_1613005_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000001592 94.0
BYD1_k127_1638528_0 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005439 366.0
BYD1_k127_1638528_1 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 342.0
BYD1_k127_1638528_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000005214 203.0
BYD1_k127_1638528_3 - - - - 0.00000000000000000000000002105 117.0
BYD1_k127_1638528_4 - - - - 0.0000000000000000000002656 111.0
BYD1_k127_1638528_5 3D domain - - - 0.000000000000005159 83.0
BYD1_k127_177353_0 PFAM ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 347.0
BYD1_k127_177353_1 Bacterial extracellular solute-binding protein - - - 0.000000000000000000000000000000000000000000000000000000009461 217.0
BYD1_k127_177353_2 Permease YjgP YjgQ family K11720 - - 0.00002424 55.0
BYD1_k127_1777182_0 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001878 498.0
BYD1_k127_1777182_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 404.0
BYD1_k127_1777182_2 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.0000000000000000000000000000000000000000000001401 171.0
BYD1_k127_1777182_3 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000002172 173.0
BYD1_k127_1777182_4 ribosomal protein l17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000002739 132.0
BYD1_k127_1777182_5 Peptidase dimerisation domain K01436 - - 0.0000000000000003712 83.0
BYD1_k127_1777182_6 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000001191 69.0
BYD1_k127_1777182_7 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000006789 51.0
BYD1_k127_1796296_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 546.0
BYD1_k127_1796296_1 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 460.0
BYD1_k127_1796296_2 dehydrogenases and related proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 366.0
BYD1_k127_1796296_3 PFAM Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002676 301.0
BYD1_k127_1796296_4 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000007179 228.0
BYD1_k127_1796296_5 PFAM Formylglycine-generating sulfatase enzyme - - - 0.000000000000000000000000000000000000000000009897 175.0
BYD1_k127_1796296_6 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000004064 122.0
BYD1_k127_1796296_7 Belongs to the UPF0312 family - - - 0.00000000000001025 85.0
BYD1_k127_1975597_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009337 470.0
BYD1_k127_1975597_1 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000008406 157.0
BYD1_k127_1975597_2 Methyltransferase domain K18534 - 2.1.1.295 0.000000000000000001049 98.0
BYD1_k127_1981901_0 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000004135 246.0
BYD1_k127_1981901_1 glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.000000000000000000000000000000000000000000000000000000000000472 215.0
BYD1_k127_1981901_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000006447 169.0
BYD1_k127_1981901_3 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000491 168.0
BYD1_k127_1981901_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000004852 118.0
BYD1_k127_1981901_5 - - - - 0.000000000000000000000004693 116.0
BYD1_k127_1981901_6 PBS lyase HEAT-like repeat - - - 0.0000000002293 72.0
BYD1_k127_2001004_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1032.0
BYD1_k127_2001004_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 374.0
BYD1_k127_2001004_2 general secretion pathway protein D K02453 - - 0.000000000000000000000000000000000000000000000000000000000008052 234.0
BYD1_k127_2001004_3 Type II secretion system (T2SS), protein K - - - 0.00000000000000000000000002248 124.0
BYD1_k127_2001004_4 type IV pilus modification protein PilV K02458 - - 0.000002145 55.0
BYD1_k127_2001004_5 type II secretion system protein K02459 - - 0.000009226 56.0
BYD1_k127_2001004_6 protein transport across the cell outer membrane K02457,K02458,K08084 - - 0.0003087 50.0
BYD1_k127_2066389_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 396.0
BYD1_k127_2066389_1 Calcineurin-like phosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 334.0
BYD1_k127_2066389_2 PFAM cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000003081 184.0
BYD1_k127_2066389_3 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.000000000000000000000000000000000000000000002326 172.0
BYD1_k127_2066389_4 DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000004257 173.0
BYD1_k127_2066389_5 COG1226 Kef-type K transport systems - - - 0.00000000000000000000000000000000001331 151.0
BYD1_k127_2066389_6 Large-conductance mechanosensitive channel, MscL K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000001517 141.0
BYD1_k127_2066389_7 von Willebrand factor, type A K11912 - 2.7.11.1 0.0000000000000000003075 102.0
BYD1_k127_2088321_0 COG1077 Actin-like ATPase involved in cell morphogenesis K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 469.0
BYD1_k127_2088321_1 Penicillin-binding protein, dimerisation domain K05515 - 3.4.16.4 0.0009346 50.0
BYD1_k127_2104479_0 Pyridoxal-dependent decarboxylase conserved domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 544.0
BYD1_k127_2104479_1 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 431.0
BYD1_k127_2104479_2 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 305.0
BYD1_k127_2104479_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000007416 166.0
BYD1_k127_2104479_4 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000001669 169.0
BYD1_k127_2137956_0 COG1239 Mg-chelatase subunit ChlI K03405 - 6.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005502 597.0
BYD1_k127_2137956_1 OPT oligopeptide transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 460.0
BYD1_k127_2137956_10 - - - - 0.0001137 51.0
BYD1_k127_2137956_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 356.0
BYD1_k127_2137956_3 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000005825 259.0
BYD1_k127_2137956_4 SCO1/SenC K07152 - - 0.000000000000000000000000007435 120.0
BYD1_k127_2137956_5 Belongs to the MraZ family K03925 - - 0.00000000000003398 79.0
BYD1_k127_2137956_6 membrane K07152,K08976 - - 0.000000000001948 70.0
BYD1_k127_2137956_7 positive regulation of growth rate - - - 0.0000000008748 71.0
BYD1_k127_2137956_8 membrane K07152,K08976 - - 0.000006327 51.0
BYD1_k127_2137956_9 Endonuclease/Exonuclease/phosphatase family - - - 0.00001739 54.0
BYD1_k127_2143210_0 intracellular protein transport - - - 1.641e-242 785.0
BYD1_k127_2143210_1 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006966 377.0
BYD1_k127_2143210_2 PFAM GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000006104 253.0
BYD1_k127_2143210_3 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000003321 198.0
BYD1_k127_2143210_4 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.0000000000000000000000000000000000005906 160.0
BYD1_k127_2143210_5 - - - - 0.00000000001632 78.0
BYD1_k127_2143210_6 - - - - 0.0001598 51.0
BYD1_k127_2169243_0 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000001627 239.0
BYD1_k127_2169243_1 Role in flagellar biosynthesis K02421 - - 0.0000000000000000009745 98.0
BYD1_k127_2169243_2 Flagellar biosynthetic protein FliQ K02420 - - 0.000000000000005292 79.0
BYD1_k127_2169243_3 flagellar K02418 - - 0.0001077 53.0
BYD1_k127_2238259_0 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 613.0
BYD1_k127_2238259_1 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 322.0
BYD1_k127_2238259_10 - - - - 0.0000000001424 72.0
BYD1_k127_2238259_2 Galactokinase K00849 GO:0000166,GO:0003674,GO:0003824,GO:0004335,GO:0005488,GO:0005524,GO:0005534,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006012,GO:0006059,GO:0006066,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019318,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019388,GO:0019400,GO:0019402,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019751,GO:0019752,GO:0030246,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0033499,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042866,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048029,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0061620,GO:0061622,GO:0061623,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615 2.7.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004911 286.0
BYD1_k127_2238259_3 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007438 276.0
BYD1_k127_2238259_4 Thymidylate kinase K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000002691 175.0
BYD1_k127_2238259_5 LemA family K03744 - - 0.00000000000000000000000000000000000000000000121 171.0
BYD1_k127_2238259_6 COG2812 DNA polymerase III, gamma tau subunits K02341 - 2.7.7.7 0.0000000000000000000000000000000000000009412 160.0
BYD1_k127_2238259_7 Cytochrome c K00406,K20200 - - 0.0000000000000000000000000002006 123.0
BYD1_k127_2238259_8 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000001081 101.0
BYD1_k127_2238259_9 protein conserved in bacteria - - - 0.0000000000000000000003822 110.0
BYD1_k127_2268172_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 5.837e-204 657.0
BYD1_k127_2268172_1 nitrite transmembrane transporter activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 544.0
BYD1_k127_2268172_10 - - - - 0.00009733 46.0
BYD1_k127_2268172_11 Recombinase zinc beta ribbon domain - - - 0.0002089 49.0
BYD1_k127_2268172_2 Tetratricopeptide repeat K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 526.0
BYD1_k127_2268172_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 386.0
BYD1_k127_2268172_4 Periplasmic binding protein LacI transcriptional regulator K10439 - - 0.00000000000000000000000000000000000000000000000000000000000000001242 237.0
BYD1_k127_2268172_5 ATPases associated with a variety of cellular activities K10441 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000003399 202.0
BYD1_k127_2268172_6 [2Fe-2S] binding domain - - - 0.000000000000000000000000000000000000000000000007006 176.0
BYD1_k127_2268172_7 Hemerythrin HHE cation binding K07322 - - 0.0000000000000000000000000000002866 131.0
BYD1_k127_2268172_8 MobA-Related Protein K00087,K07141,K07402,K19190 - 1.1.1.328,1.17.1.4,2.7.7.76 0.0000000000000000000001808 105.0
BYD1_k127_2268172_9 Sigma-70 region 2 - - - 0.00000000000000009011 93.0
BYD1_k127_2299939_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.368e-224 713.0
BYD1_k127_2299939_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001892 275.0
BYD1_k127_2299939_2 ABC-type Zn2 transport system, periplasmic component surface adhesin - - - 0.00000000000000000000000000000000000000000000000000000000000000001167 237.0
BYD1_k127_2299939_3 Heme copper-type cytochrome quinol oxidase, subunit K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000008704 223.0
BYD1_k127_2299939_4 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.000000000000000000000000000000000000000000000000000132 199.0
BYD1_k127_2299939_5 Prokaryotic Cytochrome C oxidase subunit IV K02277 - 1.9.3.1 0.000000000000000000749 93.0
BYD1_k127_2299939_6 COG1845 Heme copper-type cytochrome quinol oxidase subunit K02276 - 1.9.3.1 0.0000000000005343 76.0
BYD1_k127_2314101_0 - - - - 0.000000000000000006407 91.0
BYD1_k127_2314101_1 - - - - 0.0000000002202 72.0
BYD1_k127_2314101_2 Formiminotransferase-cyclodeaminase - - - 0.0001452 49.0
BYD1_k127_2331723_0 DNA polymerase A domain K02335 - 2.7.7.7 6.068e-222 719.0
BYD1_k127_2331723_1 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 3.85e-199 627.0
BYD1_k127_2331723_2 NADPH:quinone reductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 345.0
BYD1_k127_2331723_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 315.0
BYD1_k127_2331723_4 DNA recombination K03497,K13582 - - 0.00000000000000000000000000005255 132.0
BYD1_k127_2386464_0 GDSL-like Lipase/Acylhydrolase - - - 0.0000000000000000000000000000000000000000000004179 183.0
BYD1_k127_2386464_1 Family of unknown function (DUF5309) - - - 0.0000000000000000000000000000000000007185 156.0
BYD1_k127_2386464_2 DinB family - - - 0.00000000000000000002293 96.0
BYD1_k127_2386464_3 COG3911 Predicted ATPase - - - 0.0000000009277 68.0
BYD1_k127_2386464_4 Phage portal protein, SPP1 Gp6-like - - - 0.000000003891 68.0
BYD1_k127_2387664_0 Glycosyltransferase like family 2 - - - 7.025e-208 677.0
BYD1_k127_2387664_1 ABC-type multidrug transport system ATPase and permease K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 586.0
BYD1_k127_2387664_2 homoserine kinase activity K18844 - - 0.000001385 60.0
BYD1_k127_2387664_3 Aminoglycoside phosphotransferase - - - 0.000001597 60.0
BYD1_k127_2387664_4 hydroxymethylglutaryl-CoA reductase K00021 - 1.1.1.34 0.0001596 53.0
BYD1_k127_244698_0 COGs COG1680 Beta-lactamase class C and other penicillin binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 542.0
BYD1_k127_244698_1 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 525.0
BYD1_k127_244698_2 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 397.0
BYD1_k127_244698_3 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 309.0
BYD1_k127_244698_4 Belongs to the peptidase S41A family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001136 271.0
BYD1_k127_244698_5 Activator of Hsp90 ATPase 1 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002388 250.0
BYD1_k127_244698_6 Cupin - - - 0.000000000000000000000000000000000000000000000000000002553 195.0
BYD1_k127_244698_7 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000001002 118.0
BYD1_k127_244698_8 - - - - 0.000000000000000008985 92.0
BYD1_k127_248393_0 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003717 474.0
BYD1_k127_248393_1 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 355.0
BYD1_k127_248393_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005521 292.0
BYD1_k127_248393_3 COG1716 FOG FHA domain - - - 0.00000000000006437 78.0
BYD1_k127_2485606_0 Protein of unknown function (DUF2891) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002295 403.0
BYD1_k127_2485606_1 phosphatidylcholine synthase activity K01004 - 2.7.8.24 0.00000000000000000000000000000000000000000000000000000000000000000000000266 252.0
BYD1_k127_2485606_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000004399 159.0
BYD1_k127_2485606_4 Phosphodiester glycosidase - - - 0.000000000000000000000000000000006363 142.0
BYD1_k127_249865_0 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 380.0
BYD1_k127_249865_1 Glycosyl transferase WecB/TagA/CpsF family K05946 - 2.4.1.187 0.0000000000000000000000000000000000000000000000000000000000000000000000003291 273.0
BYD1_k127_249865_2 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.000000000000000000000000000000000000000000000003191 186.0
BYD1_k127_249865_4 PFAM glycosyl transferase family 2 - - - 0.0000003775 54.0
BYD1_k127_2501930_0 Tfp pilus assembly protein FimV - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009118 545.0
BYD1_k127_2501930_1 Belongs to the bacterial solute-binding protein 9 family K02077,K09815,K09818 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009311 413.0
BYD1_k127_2501930_2 ATPase activity K02013,K09817 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 310.0
BYD1_k127_2501930_3 ABC 3 transport family K02075,K09816 - - 0.0000000000000000000000000000000000000000000000000000000003558 209.0
BYD1_k127_2501930_4 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000001889 96.0
BYD1_k127_2529894_0 FHA domain K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000007899 265.0
BYD1_k127_2529894_1 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000002755 189.0
BYD1_k127_2529894_2 PASTA domain K03587 - 3.4.16.4 0.00000000000000000000000000000000000000000000001824 185.0
BYD1_k127_2529894_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000001228 100.0
BYD1_k127_2529894_4 glycosyl transferase family 2 K20444 - - 0.0000000000001102 83.0
BYD1_k127_2529894_5 E-Z type HEAT repeats - - - 0.0009993 52.0
BYD1_k127_2762685_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00370,K07306,K17050 - 1.7.5.1,1.8.5.3 1.669e-267 839.0
BYD1_k127_2762685_1 Voltage-dependent anion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 467.0
BYD1_k127_2762685_2 4Fe-4S dicluster domain K00371,K17051 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 426.0
BYD1_k127_2762685_3 oxidoreductase activity, acting on diphenols and related substances as donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001955 261.0
BYD1_k127_2762685_4 chaperone-mediated protein complex assembly K00373,K17052 GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016530,GO:0022607,GO:0034622,GO:0042126,GO:0042128,GO:0043436,GO:0043933,GO:0044085,GO:0044237,GO:0044281,GO:0044424,GO:0044464,GO:0051131,GO:0065003,GO:0071704,GO:0071840,GO:0071941,GO:0140104,GO:2001057 - 0.0000000000000000000000000000000000001804 155.0
BYD1_k127_2762685_5 4 iron, 4 sulfur cluster binding - - - 0.000000000000000000000000000000002577 132.0
BYD1_k127_2762685_6 Transcriptional regulator - - - 0.00000000000000000000000000000008956 130.0
BYD1_k127_2762685_7 - - - - 0.000000000000000000005552 94.0
BYD1_k127_2762685_8 - - - - 0.00000000000000001667 90.0
BYD1_k127_2762685_9 nitrate reductase molybdenum cofactor assembly chaperone K17052 - - 0.0000000001254 72.0
BYD1_k127_2764520_0 Secretin and TonB N terminus short domain K02453 - - 1.072e-226 731.0
BYD1_k127_2764520_1 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000000000000000000000000003916 206.0
BYD1_k127_2764520_2 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000000000001644 176.0
BYD1_k127_2764520_3 prepilin-type N-terminal cleavage methylation K02456 - - 0.000000000000000000000000000000000000001205 151.0
BYD1_k127_2764520_4 Belongs to the UPF0102 family K07460 - - 0.000000000000000000000000000003507 121.0
BYD1_k127_2764520_5 - - - - 0.000000000000000002475 92.0
BYD1_k127_2764520_6 carbon utilization - - - 0.000000000000002758 85.0
BYD1_k127_2764520_7 - - - - 0.000000000000008189 81.0
BYD1_k127_2776235_0 Trypsin K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 360.0
BYD1_k127_2776235_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 291.0
BYD1_k127_2776235_2 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009254 273.0
BYD1_k127_2776235_3 diol metabolic process K01724 - 4.2.1.96 0.0000000000000000000003454 98.0
BYD1_k127_2776235_4 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases K07313 - 3.1.3.16 0.00000000000000004643 92.0
BYD1_k127_2776235_5 Belongs to the peptidase S1C family K04771 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000009659 77.0
BYD1_k127_2776235_6 Glycosyl transferases group 1 - - - 0.0007001 52.0
BYD1_k127_2778875_0 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001215 306.0
BYD1_k127_2778875_1 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000000000000000004052 232.0
BYD1_k127_2778875_2 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000155 101.0
BYD1_k127_2778875_3 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.00000000000000001329 87.0
BYD1_k127_2778875_4 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.00000000000000194 88.0
BYD1_k127_2781291_0 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000327 480.0
BYD1_k127_2781291_1 PFAM amidohydrolase K01468 - 3.5.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 294.0
BYD1_k127_2781291_2 - - - - 0.0000000000000000000000000000000000000000000001123 190.0
BYD1_k127_2781291_3 Belongs to the arginase family K01479 - 3.5.3.8 0.00000000000000000000000000000000009975 146.0
BYD1_k127_2781291_4 Histidine kinase - - - 0.0000000000000000000676 93.0
BYD1_k127_2781291_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000001633 75.0
BYD1_k127_2834938_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 336.0
BYD1_k127_2834938_1 Ribosomal protein S1 K02945 - - 0.000000000000000000000000000000000000000000000000000000000000000001883 239.0
BYD1_k127_2834938_2 Carbon-nitrogen hydrolase - - - 0.000000000000000000000000000000000000000000000000000005068 200.0
BYD1_k127_2834938_3 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000003084 192.0
BYD1_k127_2863615_0 PFAM glycogen synthase K00693 - 2.4.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004729 590.0
BYD1_k127_2894934_0 secondary active sulfate transmembrane transporter activity K03321 GO:0003333,GO:0003674,GO:0005215,GO:0005310,GO:0005326,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0008272,GO:0008509,GO:0008514,GO:0015075,GO:0015103,GO:0015116,GO:0015138,GO:0015141,GO:0015171,GO:0015172,GO:0015179,GO:0015183,GO:0015238,GO:0015318,GO:0015556,GO:0015698,GO:0015711,GO:0015740,GO:0015741,GO:0015744,GO:0015800,GO:0015807,GO:0015810,GO:0015849,GO:0015893,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0042221,GO:0042493,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070778,GO:0071422,GO:0071702,GO:0071705,GO:0071944,GO:0072348,GO:0098656,GO:0098660,GO:0098661,GO:1901682,GO:1902358,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 559.0
BYD1_k127_2894934_1 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 334.0
BYD1_k127_2894934_2 diguanylate cyclase - - - 0.0000000000000000000000000043 123.0
BYD1_k127_2894934_3 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000001304 79.0
BYD1_k127_2945619_0 asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000008254 227.0
BYD1_k127_2945619_1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019478,GO:0019752,GO:0043436,GO:0043530,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055130,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 - 0.000000000000000000000000000000000000000005834 156.0
BYD1_k127_2945619_2 von Willebrand factor (vWF) type A domain - - - 0.000000000000008429 86.0
BYD1_k127_2945619_3 COG0811 Biopolymer transport K03561 - - 0.00000009268 62.0
BYD1_k127_3019615_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 5.769e-201 641.0
BYD1_k127_3019615_1 Major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 349.0
BYD1_k127_3019615_2 Belongs to the N(4) N(6)-methyltransferase family K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009654 317.0
BYD1_k127_3019615_3 Glyoxalase-like domain K07104 - 1.13.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000009714 263.0
BYD1_k127_3019615_4 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003729 271.0
BYD1_k127_3019615_5 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000002318 262.0
BYD1_k127_3019615_6 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000008841 197.0
BYD1_k127_3019615_7 - - - - 0.00000000000000000000004995 108.0
BYD1_k127_3019615_8 VanZ like family - - - 0.000000000205 67.0
BYD1_k127_3044046_0 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001805 336.0
BYD1_k127_3044046_1 von Willebrand factor type A - - - 0.0000000000000000000000000000000000000000000000000000000000004671 233.0
BYD1_k127_3044046_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000003434 145.0
BYD1_k127_3044046_3 chain release factor - - - 0.0000000000000000000000083 110.0
BYD1_k127_3044046_4 HicA toxin of bacterial toxin-antitoxin, - - - 0.00000000000000000003814 93.0
BYD1_k127_3046014_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004817,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006423,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 577.0
BYD1_k127_3046014_1 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 524.0
BYD1_k127_3046014_10 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000111 100.0
BYD1_k127_3046014_11 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 GO:0008150,GO:0040007 - 0.000000000000000005426 90.0
BYD1_k127_3046014_12 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000001974 80.0
BYD1_k127_3046014_13 Membrane-bound serine protease (ClpP class) - - - 0.000001647 56.0
BYD1_k127_3046014_14 - - - - 0.000004253 54.0
BYD1_k127_3046014_2 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 523.0
BYD1_k127_3046014_3 with the TIM-barrel fold K07051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 428.0
BYD1_k127_3046014_4 SigmaW regulon antibacterial - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 391.0
BYD1_k127_3046014_5 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 328.0
BYD1_k127_3046014_6 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006328 299.0
BYD1_k127_3046014_7 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000001311 270.0
BYD1_k127_3046014_8 ClpP class K07403 - - 0.00000000000000000000000000000000000000000000000000001261 209.0
BYD1_k127_3046014_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000443 138.0
BYD1_k127_3112501_0 PFAM Phosphoglucomutase phosphomannomutase, alpha beta alpha domain K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 432.0
BYD1_k127_3112501_1 PFAM oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 298.0
BYD1_k127_3112501_2 Type II/IV secretion system protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 297.0
BYD1_k127_3112501_3 Belongs to the glycerate kinase type-1 family K00865 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000003715 276.0
BYD1_k127_3112501_4 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000219 237.0
BYD1_k127_3112501_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000001481 156.0
BYD1_k127_3112501_6 - - - - 0.0000000009102 71.0
BYD1_k127_3134837_0 competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000001391 256.0
BYD1_k127_3134837_1 Belongs to the GSP D family K02453 - - 0.000000000000000000000000000000000000000001383 177.0
BYD1_k127_3134837_2 type II secretion system protein E K02652 - - 0.000000008293 61.0
BYD1_k127_3189622_0 Tfp pilus assembly protein FimV - - - 0.000000000000000000000000000000000000000005917 179.0
BYD1_k127_3189622_1 Prenyltransferase and squalene oxidase repeat - - - 0.0005712 47.0
BYD1_k127_3255647_0 GAF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 452.0
BYD1_k127_3255647_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760 - 2.4.2.8 0.000000000000000000000000000000000000000003695 161.0
BYD1_k127_3255647_2 lysyltransferase activity K07027 - - 0.00000009796 66.0
BYD1_k127_3291508_0 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00611 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 297.0
BYD1_k127_3291508_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009178 291.0
BYD1_k127_3291508_2 Involved in cell wall K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000003432 202.0
BYD1_k127_3291508_3 - - - - 0.0000000000000000000000000000000000001858 160.0
BYD1_k127_3291508_4 Kelch motif - - - 0.000000000000000000000000000000000000333 154.0
BYD1_k127_3291508_5 Belongs to the UPF0761 family K07058 - - 0.00000000000000000005051 103.0
BYD1_k127_3291508_6 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily K03615 - - 0.000000000000009662 87.0
BYD1_k127_3291508_7 Part of a membrane complex involved in electron transport K03614 - - 0.0001729 53.0
BYD1_k127_3351641_0 PFAM Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002416 286.0
BYD1_k127_3351641_1 epimerase dehydratase K07071 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003929 275.0
BYD1_k127_3351641_2 ATPase component of Mn Zn ABC-type transporter K09817,K09820 - - 0.000000000000000000000000000000000004796 147.0
BYD1_k127_3351641_3 COG2172 Anti-sigma regulatory factor (Ser Thr protein kinase) K04757 - 2.7.11.1 0.00000000000000000000000000000583 126.0
BYD1_k127_3351641_4 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K04749 - - 0.0000000000000000000000006492 109.0
BYD1_k127_3351641_5 Methyltransferase - - - 0.00000000000000000002733 100.0
BYD1_k127_3416366_0 - - - - 0.00000000002139 76.0
BYD1_k127_3545293_0 carbohydrate transport K02025,K02027,K10201,K15771 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 361.0
BYD1_k127_3575231_0 PFAM Prenyltransferase squalene oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000376 228.0
BYD1_k127_3575231_1 MOSC domain - - - 0.00000000000000000000000000000000000000000000000000000006659 202.0
BYD1_k127_3575231_2 PFAM secretion protein HlyD family protein - - - 0.0000000000000000000000006036 120.0
BYD1_k127_3575231_3 membrane transporter protein K07090 - - 0.000003876 52.0
BYD1_k127_3679867_0 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 468.0
BYD1_k127_3679867_1 - - - - 0.0000000000000000000000000000004846 128.0
BYD1_k127_3679867_2 YceI-like domain - - - 0.00000000000000000000000000001333 129.0
BYD1_k127_3679867_3 Xylose isomerase-like TIM barrel - - - 0.0000000000000000003774 89.0
BYD1_k127_3692026_0 SNF2 Helicase protein - - - 2.388e-210 693.0
BYD1_k127_3692026_1 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 342.0
BYD1_k127_3692026_2 Succinylarginine dihydrolase K01484 - 3.5.3.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 340.0
BYD1_k127_3692026_3 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000008932 177.0
BYD1_k127_3692026_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000004041 87.0
BYD1_k127_3692026_5 Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)-succinylornithine, ammonia and CO(2) K01484 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006525,GO:0006527,GO:0006807,GO:0008150,GO:0008152,GO:0009015,GO:0009056,GO:0009063,GO:0009064,GO:0009065,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016813,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.5.3.23 0.000000000001682 68.0
BYD1_k127_3692026_6 Yqey-like protein K09117 - - 0.00000000000716 72.0
BYD1_k127_3692026_7 DNA polymerase Ligase (LigD) - - - 0.000002613 56.0
BYD1_k127_3713690_0 Transport of potassium into the cell K03549 - - 1.688e-230 731.0
BYD1_k127_3713690_1 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 547.0
BYD1_k127_3713690_2 Glycosyl hydrolase K18581 - 3.2.1.180 0.00000000000000000000000000000000000004778 158.0
BYD1_k127_3713690_3 binding-protein-dependent transport systems inner membrane component K02026,K10242 - - 0.000000000000000001995 86.0
BYD1_k127_3713690_4 - - - - 0.00000000000003963 85.0
BYD1_k127_3819838_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002861 286.0
BYD1_k127_3819838_1 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000003101 238.0
BYD1_k127_3819838_2 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000003089 116.0
BYD1_k127_3850086_0 Bacterial Peptidase A24 N-terminal domain K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000009329 220.0
BYD1_k127_3850086_1 HAD-hyrolase-like K03273 - 3.1.3.82,3.1.3.83 0.00000000000000000000000000000000001035 149.0
BYD1_k127_3850086_2 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000008747 127.0
BYD1_k127_3850086_3 Thioesterase superfamily K10806 - - 0.000000000000000000000009605 105.0
BYD1_k127_3850086_4 OmpA family - - - 0.000000000000000000001913 103.0
BYD1_k127_3850991_0 Peptidase family M1 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 550.0
BYD1_k127_3850991_1 PFAM Stage II sporulation protein E (SpoIIE) K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007137 378.0
BYD1_k127_3850991_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004208 331.0
BYD1_k127_3850991_3 Phospholipase D Active site motif K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000004959 240.0
BYD1_k127_3850991_4 phosphatidylinositol metabolic process K13671 GO:0000026,GO:0000030,GO:0003674,GO:0003824,GO:0006629,GO:0006643,GO:0006664,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009247,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - 0.0001057 53.0
BYD1_k127_3949811_0 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001711 248.0
BYD1_k127_3949811_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000007627 199.0
BYD1_k127_3949811_2 polysaccharide biosynthetic process K03328 - - 0.0000000000000000000000000000000000000000000001795 188.0
BYD1_k127_3949811_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000261 118.0
BYD1_k127_3949811_4 COG0500 SAM-dependent methyltransferases - - - 0.000000000003834 75.0
BYD1_k127_3958041_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00008333 55.0
BYD1_k127_3958041_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0002491 51.0
BYD1_k127_3982812_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 430.0
BYD1_k127_3992872_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.091e-218 701.0
BYD1_k127_3992872_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 408.0
BYD1_k127_3992872_2 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000002844 154.0
BYD1_k127_3992872_3 LexA-binding, inner membrane-associated putative hydrolase - - - 0.00000000000000000000002568 106.0
BYD1_k127_3992872_4 regulation of translation K03530 - - 0.00000000000000000001835 95.0
BYD1_k127_3992872_5 - - - - 0.0000000000000004765 78.0
BYD1_k127_3992872_6 Domain of unknown function (DUF2383) - - - 0.000003462 56.0
BYD1_k127_4004181_0 succinate dehydrogenase or fumarate reductase, flavoprotein K00239 - 1.3.5.1,1.3.5.4 1.784e-235 744.0
BYD1_k127_4004181_1 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 0.00000000000000000000000000000000000000000000000000000003036 204.0
BYD1_k127_4004181_2 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000007295 183.0
BYD1_k127_4004181_3 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000006281 177.0
BYD1_k127_4004181_4 succinate dehydrogenase K00241 - - 0.00000000000000000000000000000006891 137.0
BYD1_k127_4005703_0 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000001201 141.0
BYD1_k127_4005703_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000006844 68.0
BYD1_k127_4041456_0 Planctomycete cytochrome C - - - 1.65e-214 703.0
BYD1_k127_4041456_1 Protein of unknown function (DUF1501) - - - 9.411e-198 627.0
BYD1_k127_4041456_2 PFAM SMP-30 Gluconolaconase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 363.0
BYD1_k127_4041456_3 Planctomycete cytochrome C - - - 0.000000000000000000000000000000000000000000002015 184.0
BYD1_k127_4041456_4 pfkB family carbohydrate kinase K00882,K00917 - 2.7.1.144,2.7.1.56 0.0000000000000000000000000000000331 138.0
BYD1_k127_4076622_0 spermidine synthase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 313.0
BYD1_k127_4076622_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000002285 108.0
BYD1_k127_4076622_2 PFAM amidohydrolase - - - 0.00000000000000000007996 94.0
BYD1_k127_4077046_0 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006444 461.0
BYD1_k127_4077046_1 COG2805 Tfp pilus assembly protein, pilus retraction ATPase PilT K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 396.0
BYD1_k127_4077046_2 type IV pilus modification protein PilV K02458,K02671,K02681 - - 0.000002613 56.0
BYD1_k127_4088919_0 WD40 repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 343.0
BYD1_k127_4190336_0 UDP-N-acetyl-D-mannosamine dehydrogenase activity K02474,K13015 - 1.1.1.136 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 474.0
BYD1_k127_4190336_1 PFAM NAD-dependent epimerase dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000855 320.0
BYD1_k127_4190336_2 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000318 272.0
BYD1_k127_4190336_3 acetyltransferase (isoleucine patch superfamily) K03818 - - 0.0000000000000000000000000000000000000000009341 177.0
BYD1_k127_4190336_4 Glycosyl transferase 4-like - - - 0.0000000000000000000000006115 118.0
BYD1_k127_4190336_5 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.000000000000000000000002318 114.0
BYD1_k127_4190336_6 Domain of unknown function (DUF5122) beta-propeller - - - 0.000000000225 73.0
BYD1_k127_4190336_7 COG0500 SAM-dependent methyltransferases - - - 0.0000001681 61.0
BYD1_k127_4196534_1 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0022607,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043933,GO:0044085,GO:0044464,GO:0051259,GO:0051260,GO:0051301,GO:0065003,GO:0071840 - 0.000154 50.0
BYD1_k127_4266627_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 629.0
BYD1_k127_4284724_0 Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 325.0
BYD1_k127_4284724_1 PFAM Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000003255 194.0
BYD1_k127_4284724_2 Acetyltransferase (GNAT) domain K01635 - 4.1.2.40 0.000000000000000000000000000000004542 136.0
BYD1_k127_4284724_3 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000003926 112.0
BYD1_k127_4284724_4 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.0004212 53.0
BYD1_k127_4327566_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 608.0
BYD1_k127_4327566_1 von willebrand factor, type A - - - 0.000005687 57.0
BYD1_k127_4363811_0 Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003608 267.0
BYD1_k127_4363811_2 - - - - 0.000000000000001841 87.0
BYD1_k127_4363811_3 - - - - 0.000000000000002 87.0
BYD1_k127_4384625_0 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000005202 124.0
BYD1_k127_4384625_1 PQQ-like domain - - - 0.00000000005611 78.0
BYD1_k127_4456180_0 Saccharopine dehydrogenase C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001701 544.0
BYD1_k127_4456180_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 522.0
BYD1_k127_4456180_2 Belongs to the alkaline phosphatase family K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 422.0
BYD1_k127_4456180_3 BAAT / Acyl-CoA thioester hydrolase C terminal K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 338.0
BYD1_k127_4456180_4 homolog of Blt101 - - - 0.00000000000000001407 83.0
BYD1_k127_4456180_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.0001803 47.0
BYD1_k127_4478702_0 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008833 330.0
BYD1_k127_4478702_1 COG1331 Highly conserved protein containing a thioredoxin domain K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004295 260.0
BYD1_k127_4478702_2 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000003664 196.0
BYD1_k127_4478702_3 adenylate kinase (ATP-AMP transphosphorylase) K00939 - - - 0.0000000000000000000000000000000000000003537 159.0
BYD1_k127_4478702_4 PFAM Rhomboid family - - - 0.00000000000000000000000000000000001222 150.0
BYD1_k127_4478702_5 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000005818 147.0
BYD1_k127_4503157_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 463.0
BYD1_k127_4503157_1 Aminotransferase class-V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 415.0
BYD1_k127_4503157_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 321.0
BYD1_k127_4503157_3 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001603 261.0
BYD1_k127_4503157_4 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000004367 169.0
BYD1_k127_4503157_5 Protein of unknown function (DUF4242) - - - 0.000000000000000000000000000000000786 132.0
BYD1_k127_4503897_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 2.026e-197 630.0
BYD1_k127_4503897_1 Protein of unknown function (DUF1343) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 387.0
BYD1_k127_4503897_2 dUTPase K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 319.0
BYD1_k127_4503897_3 DinB superfamily - - - 0.000000000000000000000000000000000000005608 150.0
BYD1_k127_4513375_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 2.292e-283 889.0
BYD1_k127_4513375_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 431.0
BYD1_k127_4513375_2 ABC-type cobalamin Fe3 K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000002509 186.0
BYD1_k127_4513375_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000506 180.0
BYD1_k127_4513375_4 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.0000000000000000000000000000000000000007016 153.0
BYD1_k127_4513375_5 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000001392 145.0
BYD1_k127_456835_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001281 290.0
BYD1_k127_456835_1 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.000000000000000000000000000000001774 144.0
BYD1_k127_4596905_0 Protein of unknown function (DUF968) - - - 0.000000000000000000000003781 106.0
BYD1_k127_4596905_1 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000001084 108.0
BYD1_k127_4596905_2 Protein of unknown function (DUF3489) - - - 0.0000000000000000006108 95.0
BYD1_k127_4596905_3 Siphovirus Gp157 - - - 0.0005063 50.0
BYD1_k127_4616727_0 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000001097 271.0
BYD1_k127_4616727_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000001569 176.0
BYD1_k127_4616727_2 Psort location Cytoplasmic, score 8.87 K00854 - 2.7.1.17 0.000000000000000000000001375 106.0
BYD1_k127_4616727_3 - - - - 0.0000000000005984 72.0
BYD1_k127_4645293_0 homoserine dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007902 453.0
BYD1_k127_4645293_1 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000002271 156.0
BYD1_k127_4645293_2 CHAD - - - 0.00000000000000000000000000000001966 139.0
BYD1_k127_4645293_3 Protein of unknown function (DUF1326) - - - 0.000000000000000000000000000004242 130.0
BYD1_k127_4716744_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.184e-262 834.0
BYD1_k127_4716744_1 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000002133 92.0
BYD1_k127_4716744_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000004558 85.0
BYD1_k127_4847774_0 Extracellular solute-binding protein, family 5 K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 488.0
BYD1_k127_4847774_1 COG1173 ABC-type dipeptide oligopeptide nickel transport systems permease components K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 380.0
BYD1_k127_4847774_2 Binding-protein-dependent transport system inner membrane component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003018 266.0
BYD1_k127_4847774_3 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000000000000178 182.0
BYD1_k127_4907643_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 1.671e-222 717.0
BYD1_k127_4907643_1 DNA methyltransferase K07318 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008964 441.0
BYD1_k127_4907643_10 Protein of unknown function DUF72 - - - 0.00000002724 61.0
BYD1_k127_4907643_2 Trehalose utilisation K09992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002175 275.0
BYD1_k127_4907643_3 acid phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000003997 225.0
BYD1_k127_4907643_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 0.000000000000000000000000000000000000000000000000000000001743 209.0
BYD1_k127_4907643_5 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000001511 197.0
BYD1_k127_4907643_6 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000001377 138.0
BYD1_k127_4907643_7 MazG-like family - - - 0.000000000000000000000000000000339 125.0
BYD1_k127_4907643_8 Protein of unknown function (DUF4056) - - - 0.00000000000000000000000000001352 131.0
BYD1_k127_4907643_9 Polysaccharide pyruvyl transferase - - - 0.0000000000000000002621 100.0
BYD1_k127_493207_0 Myo-inositol-1-phosphate synthase K01858 - 5.5.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004646 413.0
BYD1_k127_493207_1 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 399.0
BYD1_k127_493207_2 Type II and III secretion system protein K02280 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001991 290.0
BYD1_k127_493207_3 Pilus assembly protein CpaB K02279 - - 0.0000000000000000000008135 107.0
BYD1_k127_493207_4 PFAM Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.0000000000001283 79.0
BYD1_k127_493207_5 TadE-like protein - - - 0.000000005978 63.0
BYD1_k127_493207_6 Flp Fap pilin component K02651 - - 0.000002471 56.0
BYD1_k127_493207_7 Flp Fap pilin component K02651 - - 0.00003588 48.0
BYD1_k127_493207_8 Flp pilus assembly protein, ATPase CpaE K02282 - - 0.00007327 51.0
BYD1_k127_4948466_0 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002191 530.0
BYD1_k127_4948466_1 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 438.0
BYD1_k127_4948466_2 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 - 1.14.13.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 432.0
BYD1_k127_4948466_3 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000145 167.0
BYD1_k127_4948466_4 - - - - 0.000000000000000000000000000000000000009401 151.0
BYD1_k127_4948466_5 DoxX K15977 - - 0.0000000000000000000000003852 111.0
BYD1_k127_4948466_6 oxidation-reduction process K01617,K15067 - 3.5.99.5,4.1.1.77 0.00000000000000000001628 92.0
BYD1_k127_4948466_7 - - - - 0.0000000000000000009414 90.0
BYD1_k127_4948466_8 Heavy-metal-associated domain - - - 0.000186 48.0
BYD1_k127_4983354_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 411.0
BYD1_k127_4983354_1 UDP-N-acetylmuramyl pentapeptide K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000003737 256.0
BYD1_k127_5001100_0 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K07106,K09001 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 2.7.1.170,4.2.1.126 0.00000000000000000000000000000000000000000000000000000000000000005843 237.0
BYD1_k127_5001100_1 Domain of unknown function (DUF1736) - - - 0.000000000000000000004647 109.0
BYD1_k127_5001100_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000003518 73.0
BYD1_k127_5003156_0 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006227 313.0
BYD1_k127_5003156_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000002573 131.0
BYD1_k127_5003156_2 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000008822 94.0
BYD1_k127_5003156_3 negative regulation of transcription, DNA-templated K10947 - - 0.000000000000000001247 93.0
BYD1_k127_502175_0 TIGRFAM oligoendopeptidase, M3 family K08602 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 557.0
BYD1_k127_502175_1 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000004437 149.0
BYD1_k127_502175_2 - - - - 0.000005797 56.0
BYD1_k127_5064097_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 370.0
BYD1_k127_5064097_1 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000000000000002459 135.0
BYD1_k127_5064097_2 Zinc-dependent metalloprotease - - - 0.000002859 58.0
BYD1_k127_5064097_3 - - - - 0.00004878 52.0
BYD1_k127_5191338_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000418 251.0
BYD1_k127_5191338_1 Belongs to the pseudouridine synthase RsuA family K06178,K06183 - 5.4.99.19,5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000002854 224.0
BYD1_k127_5191338_2 protein SCO1 SenC PrrC involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000005001 148.0
BYD1_k127_5191338_3 MobA-like NTP transferase domain - - - 0.00000002762 63.0
BYD1_k127_5236952_0 ADP-L-glycero-beta-D-manno-heptose biosynthetic process K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 399.0
BYD1_k127_5236952_1 extracellular solute-binding protein K02012 - - 0.0000000000000000000000000000000000000000000000000000000003025 217.0
BYD1_k127_5236952_2 Oxidoreductase NAD-binding domain K00528 - 1.18.1.2,1.19.1.1 0.0000000000000000000000000000000000000000000000000000002288 205.0
BYD1_k127_5236952_3 Thioredoxin - - - 0.00000000000000000000000000000000000000000000106 173.0
BYD1_k127_5236952_4 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03086 - - 0.00000000000000000000000000000000000000000003622 168.0
BYD1_k127_5236952_5 nuclear chromosome segregation - - - 0.000000001331 71.0
BYD1_k127_5236952_6 Resolvase, N terminal domain - - - 0.00001221 48.0
BYD1_k127_5246893_0 Bacterial protein of unknown function (DUF885) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 474.0
BYD1_k127_5246893_1 membrane protein, terc K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 319.0
BYD1_k127_5246893_2 membrane - - - 0.00000000000000000000000000000000000000000004486 170.0
BYD1_k127_5246893_3 - - - - 0.00000000000000000000000000002886 123.0
BYD1_k127_5246893_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.0000000000000000000000000001308 118.0
BYD1_k127_5246893_5 Peptidase S24-like - - - 0.0000000009306 69.0
BYD1_k127_5246893_6 Helix-turn-helix domain - - - 0.000703 51.0
BYD1_k127_5252641_0 asparaginase K01424,K01444,K13051 GO:0005575,GO:0005623,GO:0042597,GO:0044464 3.4.19.5,3.5.1.1,3.5.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 473.0
BYD1_k127_5252641_1 lipase activity - - - 0.00000000000000000000000000000000000000007265 166.0
BYD1_k127_5255041_0 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007777 398.0
BYD1_k127_5255041_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY K03106 - 3.6.5.4 0.000000000000000000000000000000000000000003603 160.0
BYD1_k127_5255041_2 protein kinase activity - - - 0.00000000001332 73.0
BYD1_k127_5255041_3 translation initiation factor activity K08086,K08372 - - 0.0000001299 62.0
BYD1_k127_5255312_0 RF-1 domain K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.000000000000004719 79.0
BYD1_k127_5255312_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000003879 60.0
BYD1_k127_5255312_2 C-terminal four TMM region of protein-O-mannosyltransferase K00728 GO:0000030,GO:0003674,GO:0003824,GO:0006464,GO:0006486,GO:0006493,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0034645,GO:0035268,GO:0035269,GO:0036211,GO:0040007,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0070085,GO:0071704,GO:0097502,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.4.1.109 0.0001468 54.0
BYD1_k127_5299447_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 593.0
BYD1_k127_5299447_1 glycerophosphodiester transmembrane transport K02026 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 323.0
BYD1_k127_5299447_2 Binding-protein-dependent transport system inner membrane component K02025 - - 0.000000000000000000000000007703 111.0
BYD1_k127_5306400_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 286.0
BYD1_k127_5306400_1 COG0402 Cytosine deaminase and related metal-dependent K20810 - 3.5.4.40 0.0000000000000000000000000000000000000000000000000000000008409 217.0
BYD1_k127_5306400_2 PFAM Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000003809 188.0
BYD1_k127_5306400_3 - - - - 0.0000000000000000000009469 104.0
BYD1_k127_5306400_4 Lysine exporter protein LysE YggA - - - 0.00000000000005617 83.0
BYD1_k127_5427240_0 COG2804 Type II secretory pathway ATPase PulE Tfp pilus assembly pathway ATPase PilB K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006782 586.0
BYD1_k127_5427240_1 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003633 261.0
BYD1_k127_5427240_2 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000008421 238.0
BYD1_k127_5427240_3 Response regulator, receiver K03413 - - 0.000000000000000000000001573 107.0
BYD1_k127_5427240_4 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00007233 49.0
BYD1_k127_5530988_0 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03086,K03093 - - 0.0000000000000000000000000000000000000000000000000000000000001052 227.0
BYD1_k127_5530988_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000007607 201.0
BYD1_k127_5530988_2 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000001468 100.0
BYD1_k127_5530988_3 Forkhead associated domain - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005618,GO:0005623,GO:0005886,GO:0006109,GO:0006110,GO:0006140,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009895,GO:0009987,GO:0010563,GO:0010675,GO:0010677,GO:0016020,GO:0016310,GO:0019219,GO:0019220,GO:0019222,GO:0019538,GO:0030312,GO:0030808,GO:0030809,GO:0030811,GO:0030812,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031330,GO:0036211,GO:0042325,GO:0042326,GO:0042802,GO:0043170,GO:0043412,GO:0043457,GO:0043467,GO:0043470,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0045820,GO:0045912,GO:0045934,GO:0045936,GO:0045980,GO:0046777,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051193,GO:0051195,GO:0051196,GO:0051198,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:1900371,GO:1900372,GO:1900542,GO:1900543,GO:1901564,GO:1903578,GO:1903579,GO:2001169,GO:2001170 - 0.0004362 55.0
BYD1_k127_5617140_0 Outer membrane protein assembly complex, YaeT protein K07277 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 439.0
BYD1_k127_5617140_1 von Willebrand factor, type A - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 383.0
BYD1_k127_5617140_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000002838 214.0
BYD1_k127_5666020_0 PIN domain K07175 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004331 496.0
BYD1_k127_5666020_1 ABC-type multidrug transport system ATPase K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 345.0
BYD1_k127_5666020_10 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.00000004007 66.0
BYD1_k127_5666020_2 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004353 278.0
BYD1_k127_5666020_3 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.000000000000000000000000000000000000000000000000000000745 202.0
BYD1_k127_5666020_4 mannose-6-phosphate isomerase K01809 - 5.3.1.8 0.0000000000000000000000000000000000000000000000000001757 199.0
BYD1_k127_5666020_5 PFAM Acetyltransferase (GNAT) family K00657 - 2.3.1.57 0.0000000000000000000000000000000000000000000000000003513 188.0
BYD1_k127_5666020_6 thioesterase K07107 - - 0.00000000000000000000000000000000005552 138.0
BYD1_k127_5666020_7 Putative tRNA binding domain K01874 - 6.1.1.10 0.00000000000000000000000000000007229 128.0
BYD1_k127_5666020_8 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.00000000167 69.0
BYD1_k127_5684129_0 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 360.0
BYD1_k127_5684129_1 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004613 286.0
BYD1_k127_5684129_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000001966 149.0
BYD1_k127_5684129_3 Protein of unknown function (DUF1800) - - - 0.00000000009761 68.0
BYD1_k127_5684129_4 Glycine zipper - - - 0.00005906 52.0
BYD1_k127_5710329_0 PFAM sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 488.0
BYD1_k127_5710329_1 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 479.0
BYD1_k127_5710329_2 Tricorn protease PDZ domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008427 360.0
BYD1_k127_5710329_3 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002246 317.0
BYD1_k127_5710329_4 Belongs to the FPP GGPP synthase family K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000001343 220.0
BYD1_k127_5710329_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000007836 68.0
BYD1_k127_5710329_6 Tricorn protease homolog K08676 - - 0.00000003208 59.0
BYD1_k127_5727047_0 Belongs to the proline racemase family K12658 - 5.1.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009397 468.0
BYD1_k127_5727047_1 His Kinase A (phosphoacceptor) domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 334.0
BYD1_k127_5727047_2 ketoglutarate semialdehyde dehydrogenase K13877 - 1.2.1.26 0.0000000000000000000000000000000000000006678 151.0
BYD1_k127_5727047_3 PhoQ Sensor - - - 0.0000000000000000000001354 102.0
BYD1_k127_5727047_4 Transcriptional regulatory protein, C terminal K07667 - - 0.000000007162 63.0
BYD1_k127_5787089_0 Competence-damaged protein K03742 - 3.5.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 308.0
BYD1_k127_5787089_1 protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000004599 136.0
BYD1_k127_5787089_2 Transglutaminase/protease-like homologues - - - 0.0000000116 66.0
BYD1_k127_5787089_3 His Kinase A (phosphoacceptor) domain - - - 0.00004539 53.0
BYD1_k127_5862156_0 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007129 359.0
BYD1_k127_5862156_1 PDZ domain (Also known as DHR K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008117 346.0
BYD1_k127_5862156_2 Beta-L-arabinofuranosidase, GH127 - - - 0.00000000000000000000000000000000000000000001188 168.0
BYD1_k127_5862156_3 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000002875 138.0
BYD1_k127_5862156_4 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000006899 138.0
BYD1_k127_5862156_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.000000000000000000003099 100.0
BYD1_k127_5862156_6 Predicted membrane protein (DUF2339) - - - 0.00000000000003998 87.0
BYD1_k127_5862156_7 Predicted membrane protein (DUF2339) - - - 0.0000004656 64.0
BYD1_k127_5868319_0 ATP-dependent helicase nuclease subunit A K16898 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 482.0
BYD1_k127_5868319_1 Sucrose-6F-phosphate phosphohydrolase - - - 0.0000000000000000000000000000081 130.0
BYD1_k127_5868319_2 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0016070,GO:0016853,GO:0016866,GO:0034641,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.27 0.000000000000000000000004461 105.0
BYD1_k127_5916481_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003327 316.0
BYD1_k127_5916481_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000007878 180.0
BYD1_k127_5916481_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000002585 174.0
BYD1_k127_5916481_3 - - - - 0.000000000001563 70.0
BYD1_k127_5920803_0 PFAM intradiol ring-cleavage dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 326.0
BYD1_k127_5920803_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000004762 199.0
BYD1_k127_5920803_2 acid phosphatase activity - - - 0.0000000000000000006438 91.0
BYD1_k127_5920803_3 mannose metabolic process K01191 - 3.2.1.24 0.00000000000000000146 93.0
BYD1_k127_5920803_4 NHL repeat - - - 0.00000000000003152 84.0
BYD1_k127_5923963_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 482.0
BYD1_k127_5923963_1 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 401.0
BYD1_k127_5923963_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 318.0
BYD1_k127_5923963_3 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005162 297.0
BYD1_k127_5923963_4 Domains in Na-Ca exchangers and integrin-beta4 K01406 - 3.4.24.40 0.0000000000000000000000000000000000000000000000000000000467 214.0
BYD1_k127_5923963_5 - - - - 0.000000000000000000000000000000003996 144.0
BYD1_k127_5923963_6 Glyoxalase-like domain K06996 - - 0.0000000000000000000000000002367 117.0
BYD1_k127_5927306_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.278e-247 779.0
BYD1_k127_5927306_1 Type II secretion system (T2SS), protein F K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000005299 244.0
BYD1_k127_5927306_3 PFAM Type II secretion system protein E K02454 - - 0.00002367 46.0
BYD1_k127_5960735_0 Belongs to the GSP D family K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000006735 235.0
BYD1_k127_5960735_1 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000002979 199.0
BYD1_k127_5960735_2 Haem-NO-binding - - - 0.0000000000000000000000000000000000000000000002882 170.0
BYD1_k127_5960735_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000000000000001084 93.0
BYD1_k127_6008726_0 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000005867 190.0
BYD1_k127_6008726_1 COG2931 RTX toxins and related Ca2 -binding proteins K01406 - 3.4.24.40 0.000000000000000000000000003191 130.0
BYD1_k127_6008726_2 stage II sporulation protein E K07315 - 3.1.3.3 0.000000000000000000000001588 116.0
BYD1_k127_6008726_4 ABC 3 transport family K02075,K09816 - - 0.000000000000000001726 86.0
BYD1_k127_6008726_5 His Kinase A (phosphoacceptor) domain - - - 0.000002203 59.0
BYD1_k127_6008726_6 Tryptophan halogenase - - - 0.00005401 46.0
BYD1_k127_6036172_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003238 303.0
BYD1_k127_6036172_1 Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S- and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.00000000000000000000000000000000000000000000003703 180.0
BYD1_k127_6036172_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000009633 177.0
BYD1_k127_6053519_0 DNA glycosylase K03649 - 3.2.2.28 0.000000000000000000000000000000000000000000000000000000000000003049 222.0
BYD1_k127_6053519_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0040007,GO:0044237,GO:0050515 2.7.1.148 0.0000000000000000000000000000000006554 141.0
BYD1_k127_6053519_2 Putative thioesterase (yiiD_Cterm) - - - 0.000000000000000000000006174 109.0
BYD1_k127_6053519_3 PFAM diacylglycerol kinase K00901 - 2.7.1.107 0.000000000000001413 80.0
BYD1_k127_6053519_4 Putative auto-transporter adhesin, head GIN domain - - - 0.0000002585 61.0
BYD1_k127_6053519_5 Glycosyl transferase family 41 - - - 0.00004375 56.0
BYD1_k127_6078485_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 GO:0003674,GO:0003824,GO:0003938,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.1.1.205 4.27e-202 642.0
BYD1_k127_6078485_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006935 250.0
BYD1_k127_6078485_2 Thioredoxin-like - - - 0.000000000000000000000001999 111.0
BYD1_k127_6078485_3 response regulator K02485 - - 0.00000000000000000005114 97.0
BYD1_k127_6133362_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007095 387.0
BYD1_k127_6133362_1 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000002427 140.0
BYD1_k127_6133362_2 PFAM SpoVT AbrB K07172,K18842 - - 0.0000000004193 64.0
BYD1_k127_6133362_3 Fic/DOC family K07341 - - 0.000000001448 60.0
BYD1_k127_6133362_4 PDZ DHR GLGF domain protein K08372 - - 0.000008183 49.0
BYD1_k127_6207144_0 Cysteine-rich domain K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001937 359.0
BYD1_k127_6207144_1 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids - - - 0.000000000000000000000000000000000000000004991 167.0
BYD1_k127_6207144_2 PFAM FAD binding domain K11472 - - 0.0000000000000000000000009987 115.0
BYD1_k127_6207144_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000001969 66.0
BYD1_k127_6207144_4 Belongs to the anti-sigma-factor antagonist family K06378 - - 0.00002064 51.0
BYD1_k127_6234369_0 COG0567 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes K00164 - 1.2.4.2 8.068e-221 710.0
BYD1_k127_6286403_0 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000002522 263.0
BYD1_k127_6286403_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000005023 256.0
BYD1_k127_6286403_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.0000000000000000000000000000000000000000000000000000000000000000000000104 257.0
BYD1_k127_6286403_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000002384 149.0
BYD1_k127_6286403_4 CAAX protease self-immunity - - - 0.00000000000005248 78.0
BYD1_k127_6303202_0 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 310.0
BYD1_k127_6303202_1 Integral membrane protein (PIN domain superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 298.0
BYD1_k127_6303202_2 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000007117 261.0
BYD1_k127_6303202_3 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 0.00000000000000000000000000000003104 137.0
BYD1_k127_6423059_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - 3.421e-203 647.0
BYD1_k127_6423059_1 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K00627,K09699 - 2.3.1.12,2.3.1.168 0.000000000000000000000000000000000000000000000000000000000000000000005203 252.0
BYD1_k127_6423059_2 Hydroxymethylglutaryl-CoA lyase K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000008106 213.0
BYD1_k127_6423059_3 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000002012 180.0
BYD1_k127_6450146_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 360.0
BYD1_k127_6450146_1 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000001256 264.0
BYD1_k127_6450146_2 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000001382 188.0
BYD1_k127_6450146_3 Protein of unknown function (DUF1223) - - - 0.0000000000000000000000000000000000000000008821 167.0
BYD1_k127_6450146_4 4-amino-4-deoxy-L-arabinose transferase activity K14340 - - 0.00000000000000000000000000002282 136.0
BYD1_k127_6481949_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 6.645e-254 811.0
BYD1_k127_6481949_1 deoxyhypusine monooxygenase activity K01387,K03301 - 3.4.24.3 0.0000000000000000000000000000000000000000000000000000000000000000000000004251 269.0
BYD1_k127_6481949_2 Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000004772 172.0
BYD1_k127_6523959_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 7.383e-234 748.0
BYD1_k127_6523959_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 513.0
BYD1_k127_6523959_10 Type I secretion target GGXGXDXXX repeat protein domain protein - - - 0.000000000000000000002132 106.0
BYD1_k127_6523959_11 deoxyhypusine monooxygenase activity - - - 0.0000005192 61.0
BYD1_k127_6523959_2 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007979 301.0
BYD1_k127_6523959_3 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000001807 234.0
BYD1_k127_6523959_4 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000002011 244.0
BYD1_k127_6523959_5 Provides the (R)-glutamate required for cell wall biosynthesis K01776 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008881,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0030203,GO:0034645,GO:0036361,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 5.1.1.3 0.000000000000000000000000000000000000000000000000000000004163 211.0
BYD1_k127_6523959_6 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000002138 169.0
BYD1_k127_6523959_7 response regulator receiver - - - 0.00000000000000000000000000000001056 132.0
BYD1_k127_6523959_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000002091 115.0
BYD1_k127_6523959_9 - - - - 0.000000000000000000000007467 102.0
BYD1_k127_6530535_0 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 426.0
BYD1_k127_6530535_1 asparagine synthase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000359 346.0
BYD1_k127_6530535_2 RNA pseudouridylate synthase K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000008966 223.0
BYD1_k127_6530535_3 cellular response to heat K09807 - - 0.00000000000000000000000000000000000004609 154.0
BYD1_k127_6530535_4 Thiol-disulfide isomerase and - - - 0.0000000000000000000000000001205 122.0
BYD1_k127_6530535_5 Transcriptional regulator K07735 - - 0.00000000000000000006668 100.0
BYD1_k127_6547505_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.000000000000000000000000008162 114.0
BYD1_k127_6547505_1 lysyltransferase activity K07027 - - 0.00000000000000000008127 104.0
BYD1_k127_6547505_2 RDD family - - - 0.000000008815 66.0
BYD1_k127_6640418_0 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008052 455.0
BYD1_k127_6640418_1 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 401.0
BYD1_k127_6640418_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000008824 167.0
BYD1_k127_6640418_3 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.0000000000000000000000000000003028 128.0
BYD1_k127_6640418_4 histidine kinase A domain protein - - - 0.00000000000000000000003043 106.0
BYD1_k127_6651853_0 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 342.0
BYD1_k127_6651853_1 2Fe-2S iron-sulfur cluster binding domain K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000002872 199.0
BYD1_k127_6651853_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000001912 195.0
BYD1_k127_6651853_3 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.000000000000000000000000000000000000003917 151.0
BYD1_k127_6815334_0 Glycosyl transferases group 1 K16703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 414.0
BYD1_k127_6815334_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 GO:0003674,GO:0003824,GO:0004812,GO:0004825,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006431,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 410.0
BYD1_k127_6815334_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007619 318.0
BYD1_k127_6815334_3 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 300.0
BYD1_k127_6815334_4 ribosomal RNA methyltransferase RrmJ FtsJ K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000006776 170.0
BYD1_k127_6824316_0 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K06147,K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003439 286.0
BYD1_k127_6824316_1 Mechanosensitive ion channel K16052 - - 0.00000000000000000000000000000000000000000000000000000000001946 222.0
BYD1_k127_6896663_0 helicase activity - - - 9.749e-284 893.0
BYD1_k127_6896663_1 PFAM Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005562 257.0
BYD1_k127_6896663_2 PFAM Rhomboid family - - - 0.00000000000000000000000000000000000000000000000000004197 198.0
BYD1_k127_6896663_3 - - - - 0.000000000000000000001202 108.0
BYD1_k127_6896663_4 TIGRFAM prepilin-type N-terminal cleavage methylation domain - - - 0.00002838 55.0
BYD1_k127_6937313_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K12257 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 570.0
BYD1_k127_6937313_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006923 409.0
BYD1_k127_6937313_2 Preprotein translocase, YajC subunit K03210 - - 0.000000727 57.0
BYD1_k127_6937313_3 Bulb-type mannose-specific lectin - - - 0.00001975 55.0
BYD1_k127_7051523_0 AAA domain (Cdc48 subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000005566 243.0
BYD1_k127_7051523_1 ATP synthase alpha/beta family, nucleotide-binding domain K02412 - 3.6.3.14 0.0000000000000000000000000000000000006889 153.0
BYD1_k127_7051523_2 flagellar motor switch protein FliG K02410 - - 0.000000000000004615 84.0
BYD1_k127_7051523_3 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000002392 83.0
BYD1_k127_7051523_4 protein trimerization K20543 - - 0.00000001661 61.0
BYD1_k127_7184356_0 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005698 349.0
BYD1_k127_7184356_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000006049 241.0
BYD1_k127_7184356_2 diguanylate cyclase activity K13069 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.000000000000000000000000000000000000000000004757 180.0
BYD1_k127_7184356_3 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.000000000000000000000000000000000000005248 153.0
BYD1_k127_7184356_4 Carrier of the growing fatty acid chain in fatty acid biosynthesis - - - 0.00000000000000000000000000000000000004221 147.0
BYD1_k127_7184356_5 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000000000001101 111.0
BYD1_k127_7184356_6 3-hydroxymyristoyl 3-hydroxydecanoyl-(acyl carrier protein) K02372 - 4.2.1.59 0.000000000000000000000002497 113.0
BYD1_k127_7192247_0 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000002766 186.0
BYD1_k127_7192247_1 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000001451 173.0
BYD1_k127_7192247_2 Thioredoxin-like - - - 0.00000000000000000000008579 102.0
BYD1_k127_7192247_3 ABC-2 type transporter K01992 - - 0.00001213 51.0
BYD1_k127_720044_0 smart pdz dhr glgf K04771,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000003667 280.0
BYD1_k127_720044_1 Histidine kinase K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002924 270.0
BYD1_k127_720044_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 GO:0000287,GO:0003674,GO:0003824,GO:0003864,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006082,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016020,GO:0016053,GO:0016740,GO:0016741,GO:0016742,GO:0019752,GO:0032787,GO:0034641,GO:0040007,GO:0042364,GO:0042398,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:0072330,GO:1901564,GO:1901566,GO:1901576 2.1.2.11 0.000000000000000000000000000000000000000000000000000000002278 211.0
BYD1_k127_720044_3 Belongs to the peptidase M16 family - - - 0.000000000000000000000000000000002046 136.0
BYD1_k127_7329150_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000371 293.0
BYD1_k127_7329150_1 Magnesium transport protein CorA K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003099 284.0
BYD1_k127_7329150_2 protein kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002224 265.0
BYD1_k127_7417303_0 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 302.0
BYD1_k127_7417303_1 TIGRFAM molybdenum cofactor synthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000008561 244.0
BYD1_k127_7417303_2 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000001691 208.0
BYD1_k127_7417303_3 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 0.000000000000000000000000000000000000000000004839 175.0
BYD1_k127_7417303_4 Protein of unknown function (DUF1579) - - - 0.0000000000000000000000001298 117.0
BYD1_k127_7417303_5 acetyltransferases and hydrolases with the alpha beta hydrolase fold K09384 - - 0.000000000000000002767 95.0
BYD1_k127_7417303_6 typically periplasmic contain C-terminal PDZ domain - - - 0.0008754 49.0
BYD1_k127_7429848_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005095 418.0
BYD1_k127_7429848_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 370.0
BYD1_k127_7429848_2 Belongs to the TrpC family K01609 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000002506 262.0
BYD1_k127_7429848_3 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000005343 184.0
BYD1_k127_7429848_4 CAAX protease self-immunity K07052 - - 0.0000001864 63.0
BYD1_k127_7429848_5 CsbD-like - - - 0.00002824 51.0
BYD1_k127_7445722_0 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 432.0
BYD1_k127_7445722_1 Belongs to the peptidase M16 family K07263 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005933 302.0
BYD1_k127_7468471_0 Secretion system protein K02283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 505.0
BYD1_k127_7468471_1 type II secretion system protein K12510 - - 0.000000000000000000000000000000000000000000000003473 185.0
BYD1_k127_7468471_2 PFAM Type II secretion system F K12511 - - 0.0000000000000000000000000000000000000000000001637 184.0
BYD1_k127_7468471_3 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000002035 171.0
BYD1_k127_7468471_4 AAA domain K02282 - - 0.00000000000000000000000002275 118.0
BYD1_k127_7468471_5 Tetratricopeptide repeat K06665 GO:0000122,GO:0000228,GO:0000785,GO:0000790,GO:0000988,GO:0000989,GO:0001076,GO:0001190,GO:0001191,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005737,GO:0006139,GO:0006323,GO:0006325,GO:0006333,GO:0006338,GO:0006342,GO:0006351,GO:0006355,GO:0006357,GO:0006366,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010565,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016043,GO:0016070,GO:0016458,GO:0016584,GO:0017053,GO:0018130,GO:0019216,GO:0019217,GO:0019219,GO:0019222,GO:0019438,GO:0019899,GO:0022607,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0032774,GO:0032879,GO:0032991,GO:0034641,GO:0034645,GO:0034654,GO:0034728,GO:0035950,GO:0035952,GO:0035953,GO:0035955,GO:0040029,GO:0042304,GO:0042826,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0045814,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046890,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0060255,GO:0062012,GO:0065007,GO:0070013,GO:0071103,GO:0071704,GO:0071824,GO:0071840,GO:0072364,GO:0080090,GO:0080134,GO:0080135,GO:0090087,GO:0090088,GO:0090089,GO:0090304,GO:0090568,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2000531,GO:2000877,GO:2000879,GO:2001020,GO:2001141 - 0.000000000004719 77.0
BYD1_k127_7468471_6 Putative Flp pilus-assembly TadE/G-like - - - 0.000000001711 70.0
BYD1_k127_7468471_7 Putative Flp pilus-assembly TadE/G-like - - - 0.000000009302 68.0
BYD1_k127_7468471_8 - - - - 0.00000961 58.0
BYD1_k127_7487932_0 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 287.0
BYD1_k127_7487932_1 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000001134 225.0
BYD1_k127_7487932_2 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000000004992 179.0
BYD1_k127_7487932_3 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000009702 165.0
BYD1_k127_7487932_4 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000001779 117.0
BYD1_k127_7487932_5 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000001911 102.0
BYD1_k127_7487932_6 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000004866 91.0
BYD1_k127_7487932_7 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000009505 92.0
BYD1_k127_7487932_8 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.0002039 47.0
BYD1_k127_751628_0 Capsular exopolysaccharide family K16554 - - 0.00000000000000000000000000000000000000000000000000000004073 221.0
BYD1_k127_751628_1 polysaccharide export K01991 - - 0.0000000000000000000000000000000000000003553 168.0
BYD1_k127_751628_2 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000008546 106.0
BYD1_k127_751628_3 Transmembrane exosortase (Exosortase_EpsH) - - - 0.00000000000007936 85.0
BYD1_k127_751628_4 COG0457 FOG TPR repeat - - - 0.00000148 63.0
BYD1_k127_7666077_0 E1-E2 ATPase K01533 - 3.6.3.4 0.0 1023.0
BYD1_k127_7666077_1 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 299.0
BYD1_k127_7666077_2 membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002906 261.0
BYD1_k127_7666077_3 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004853 264.0
BYD1_k127_7666077_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K15727 - - 0.000000000000000000000000000000000000000000000000000008928 209.0
BYD1_k127_7666077_5 Protein tyrosine serine phosphatase - - - 0.0000000000000000000000000000000000000000003484 166.0
BYD1_k127_7666077_7 - - - - 0.00000000000000000000000001113 117.0
BYD1_k127_7666077_8 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000002149 93.0
BYD1_k127_7666077_9 Zn peptidase - - - 0.000000000000009825 78.0
BYD1_k127_7670712_0 RibD C-terminal domain K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000006533 261.0
BYD1_k127_7670712_1 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000007605 111.0
BYD1_k127_7670712_2 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000001323 100.0
BYD1_k127_7670712_3 Tetratricopeptide repeat - - - 0.000000000000000007155 97.0
BYD1_k127_7766084_0 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 421.0
BYD1_k127_7766084_1 involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002096 273.0
BYD1_k127_7766084_2 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001694 237.0
BYD1_k127_7766084_3 Truncated hemoglobins K06886 - - 0.00000000000000000000000000000000000000000000000000000000000000000003292 236.0
BYD1_k127_7766084_4 Diacylglycerol kinase catalytic domain (presumed) - - - 0.00000000000000000000000000000000000000000000000000001298 202.0
BYD1_k127_7766084_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.000000000000000000000000000000000000000000000001568 181.0
BYD1_k127_7766084_7 NAD- dependent epimerase dehydratase K01710,K08678 - 4.1.1.35,4.2.1.46 0.0000000000000000000000000000000000000000249 155.0
BYD1_k127_7766084_8 regulation of RNA biosynthetic process - - - 0.0000000000000000000000000000000000005856 149.0
BYD1_k127_7766084_9 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000003941 74.0
BYD1_k127_782555_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000001499 259.0
BYD1_k127_7842589_0 MacB-like periplasmic core domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 365.0
BYD1_k127_7842589_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 359.0
BYD1_k127_7842589_2 N-terminal domain of unknown function (DUF4140) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 358.0
BYD1_k127_7842589_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 299.0
BYD1_k127_7842589_4 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001458 277.0
BYD1_k127_7842589_5 Protein of unknown function (DUF1211) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003033 242.0
BYD1_k127_7842589_6 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000006369 213.0
BYD1_k127_7842589_7 DNA segregation ATPase FtsK SpoIIIE K03466 - - 0.000000000000000000000000007697 114.0
BYD1_k127_7842589_8 response regulator, receiver - - - 0.0000000000000000000000003532 109.0
BYD1_k127_7842589_9 - - - - 0.000000000000000000003207 100.0
BYD1_k127_788907_0 Hydantoinaseoxoprolinase domain protein K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003474 487.0
BYD1_k127_788907_1 PA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005552 258.0
BYD1_k127_788907_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000009574 202.0
BYD1_k127_792500_0 homoserine kinase activity K02204,K13059 - 2.7.1.162,2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 306.0
BYD1_k127_792500_1 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002499 230.0
BYD1_k127_792500_2 ABC transporter integral K02004 - - 0.0000000000000000000000000000000000000000000000000000000009495 229.0
BYD1_k127_7978359_0 Major facilitator Superfamily K08162,K08226,K16211 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 451.0
BYD1_k127_7978359_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004092 360.0
BYD1_k127_7978359_2 ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000001147 214.0
BYD1_k127_7978359_3 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000483 141.0
BYD1_k127_7980709_0 Required for chromosome condensation and partitioning K03529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007331 608.0
BYD1_k127_7980709_1 translation initiation factor activity K03496,K09000 GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0008150,GO:0009295,GO:0016020,GO:0040007,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044424,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001652 284.0
BYD1_k127_7980709_2 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000001104 165.0
BYD1_k127_7980709_3 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation - - - 0.0000000000000000000000143 117.0
BYD1_k127_8040404_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008276 529.0
BYD1_k127_8040404_1 PFAM Glycosyl hydrolases family 43 - - - 0.0000000000000000000000000000000000000006599 158.0
BYD1_k127_8040404_2 - - - - 0.000000000000009863 81.0
BYD1_k127_8040404_3 FeoA K04758 - - 0.00003167 49.0
BYD1_k127_8075480_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.0 1076.0
BYD1_k127_8075480_1 ABC-type sugar transport system periplasmic component K10439 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 346.0
BYD1_k127_8075480_2 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000002493 226.0
BYD1_k127_8075480_3 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000003396 183.0
BYD1_k127_8112235_0 Glycosyl hydrolases family 15 - - - 2.026e-218 699.0
BYD1_k127_8112235_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 516.0
BYD1_k127_8112235_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000001439 208.0
BYD1_k127_8112235_3 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000001504 193.0
BYD1_k127_8112235_4 PFAM lipid A biosynthesis domain protein - - - 0.0000000000000000000000009845 118.0
BYD1_k127_8112235_5 - - - - 0.00000000000003872 76.0
BYD1_k127_8112235_6 Required for transformation and DNA binding K02245,K02456 GO:0005575,GO:0005623,GO:0005886,GO:0009986,GO:0016020,GO:0044464,GO:0071944 - 0.000000005708 68.0
BYD1_k127_8147917_0 transcriptional regulator K16137 - - 0.00000000000000000000000000000000000000000000000000000000502 207.0
BYD1_k127_8147917_1 PHP domain protein - - - 0.00000000000000000000000000000000000000000000000000000766 197.0
BYD1_k127_8147917_3 Domain of unknown function (DUF4440) - - - 0.00009259 53.0
BYD1_k127_815149_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 327.0
BYD1_k127_815149_1 GTP-binding signal recognition particle SRP54 K02404 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001877 277.0
BYD1_k127_815149_2 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0000000000000000000000000000000000000000000000000000000000000000005204 241.0
BYD1_k127_815149_3 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000000000000000000001745 208.0
BYD1_k127_8168391_0 Beta-L-arabinofuranosidase, GH127 K09955 - - 4.667e-292 917.0
BYD1_k127_8168391_1 WD40-like Beta Propeller Repeat - - - 0.00000000000003852 86.0
BYD1_k127_8168391_2 Ankyrin repeat - - - 0.00009012 56.0
BYD1_k127_8189765_0 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000134 278.0
BYD1_k127_8189765_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000001272 245.0
BYD1_k127_8189765_2 S1/P1 Nuclease - - - 0.0000002191 61.0
BYD1_k127_8254574_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007702 387.0
BYD1_k127_8254574_1 Polysaccharide pyruvyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007003 356.0
BYD1_k127_8254574_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003401 329.0
BYD1_k127_8254574_3 polysaccharide catabolic process K03478 - 3.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000003108 239.0
BYD1_k127_8254574_4 ECF sigma factor - - - 0.0000000000000000000000000000000009151 138.0
BYD1_k127_8254574_5 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000002651 130.0
BYD1_k127_8254574_6 homoserine kinase activity - - - 0.000000001133 68.0
BYD1_k127_8296667_0 COG0491 Zn-dependent K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 512.0
BYD1_k127_8296667_1 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 332.0
BYD1_k127_8296667_2 SMART Rhodanese domain protein - - - 0.0000000000000000000000000000000000000000000000018 183.0
BYD1_k127_8296667_3 Bacterial Fe(2+) trafficking - - - 0.00000000000000000000000000000000000000001226 164.0
BYD1_k127_8296667_4 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000003792 100.0
BYD1_k127_8296667_5 - - - - 0.00000000000009429 84.0
BYD1_k127_8296667_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000009194 55.0
BYD1_k127_8336307_0 ABC-type transport system involved in Fe-S cluster assembly, permease component K09014 - - 6.979e-241 753.0
BYD1_k127_8336307_1 Transport and Golgi organisation 2 K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 459.0
BYD1_k127_8336307_2 ATPase activity K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005157 360.0
BYD1_k127_8336307_3 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006161 345.0
BYD1_k127_8336307_4 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000003182 147.0
BYD1_k127_8336307_5 Zn_pept - - - 0.00000000000000000000000000003309 136.0
BYD1_k127_8336307_6 Transport and Golgi organisation 2 - - - 0.000000000000000006819 90.0
BYD1_k127_8336307_7 Domain of unknown function - - - 0.000000003821 70.0
BYD1_k127_8430434_0 Belongs to the GPI family K01810 - 5.3.1.9 1.148e-235 759.0
BYD1_k127_8430434_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003252 365.0
BYD1_k127_8430434_2 metal cluster binding - - - 0.0000000000000000000000000000000003443 140.0
BYD1_k127_8515423_0 Transposase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 568.0
BYD1_k127_8515423_1 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 342.0
BYD1_k127_8515423_2 Excisionase - - - 0.000000000001307 76.0
BYD1_k127_8581736_0 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region K00336 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003085 494.0
BYD1_k127_8581736_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 319.0
BYD1_k127_8581736_2 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004527 263.0
BYD1_k127_867125_0 MgtC family K07507 - - 0.000000000000000000000000001079 124.0
BYD1_k127_867125_1 MgtE intracellular N domain - - - 0.0000000000000000185 90.0
BYD1_k127_867125_2 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K04749 - - 0.0000003169 59.0
BYD1_k127_867125_3 Glycosyltransferase family 87 - - - 0.0000003838 63.0
BYD1_k127_867125_4 acetyltransferase K06889,K19273 - - 0.00001009 56.0
BYD1_k127_8700731_0 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004494 501.0
BYD1_k127_8700731_1 Endoribonuclease that initiates mRNA decay K18682 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 450.0
BYD1_k127_8700731_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000003099 194.0
BYD1_k127_8700731_3 PFAM carbon monoxide dehydrogenase subunit G K09386 - - 0.0000000000001313 78.0
BYD1_k127_8731301_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003466 398.0
BYD1_k127_8731301_1 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 335.0
BYD1_k127_8731301_2 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 305.0
BYD1_k127_8731301_3 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000003447 178.0
BYD1_k127_8731301_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000001646 179.0
BYD1_k127_8731301_5 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000001271 149.0
BYD1_k127_8731301_6 SnoaL-like domain - - - 0.0000000000001503 79.0
BYD1_k127_8731301_7 glycosyl transferase group 1 K16150 - 2.4.1.11 0.00000000002386 69.0
BYD1_k127_8791843_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007311 477.0
BYD1_k127_8791843_1 The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination. The AddB nuclease domain is not required for chi fragment generation K16899 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 354.0
BYD1_k127_8791843_2 Methyladenine glycosylase K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001325 281.0
BYD1_k127_8791843_3 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000006205 225.0
BYD1_k127_8791843_4 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000001289 196.0
BYD1_k127_8791843_5 - - - - 0.0000000000000000000000000000000000000000000001239 177.0
BYD1_k127_8791843_6 Resolvase - - - 0.0001006 46.0
BYD1_k127_8917951_0 Argininosuccinate synthase K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008492 446.0
BYD1_k127_8917951_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000002616 201.0
BYD1_k127_8939285_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 6.359e-251 787.0
BYD1_k127_8939285_1 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 400.0
BYD1_k127_8939285_2 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001189 285.0
BYD1_k127_8939285_3 Maf-like protein K06287 - - 0.000000000000000000000000000000000001347 147.0
BYD1_k127_8939285_4 PFAM Protein kinase domain - - - 0.000000000000000000000000169 124.0
BYD1_k127_8947611_0 tryptophan 2,3-dioxygenase activity K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005991 289.0
BYD1_k127_8947611_1 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000003713 181.0
BYD1_k127_8947611_2 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000009558 130.0
BYD1_k127_8947611_3 Mammalian cell entry related domain protein K02067 - - 0.000000000002599 79.0
BYD1_k127_8947611_4 plays a major role in protein secretion by helping the post-translocational extracellular folding of several secreted proteins K01802,K07533 - 5.2.1.8 0.00000000006126 74.0
BYD1_k127_906079_0 Dihydrodipicolinate reductase, C-terminus K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000009996 209.0
BYD1_k127_906079_1 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000003862 163.0
BYD1_k127_906079_2 Peptidase family M50 - - - 0.0000000000000000000000000001764 128.0
BYD1_k127_906079_3 - - - - 0.00000000000000000000000009126 108.0
BYD1_k127_906079_4 Domain of unknown function (DUF4159) - - - 0.000000004258 67.0
BYD1_k127_9080418_0 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 411.0
BYD1_k127_9080418_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000467 316.0
BYD1_k127_9080418_2 - - - - 0.00000000000000000000000000000000000000000000000000002599 207.0
BYD1_k127_9080418_3 Domain of unknown function (DUF4870) K09940 - - 0.0000000000000000000000000000000693 132.0
BYD1_k127_9080418_4 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.0000000000000000000000003251 117.0
BYD1_k127_9090009_0 Belongs to the GSP D family K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 349.0
BYD1_k127_9090009_1 peptidyl-tyrosine sulfation - - - 0.0000000000000000000000000000000000006086 155.0
BYD1_k127_9090009_2 pilus assembly protein K02662 - - 0.00000000000000000000000009084 122.0
BYD1_k127_9090009_3 Pfam:N_methyl_2 K02456 - - 0.000000000000000001655 91.0
BYD1_k127_9090009_4 Type II secretion system (T2SS), protein M K02664 - - 0.00001235 57.0
BYD1_k127_9090009_5 Prokaryotic N-terminal methylation motif K02457 - - 0.00001574 54.0
BYD1_k127_9090009_7 - - - - 0.0005553 49.0
BYD1_k127_9205886_0 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.00000000000000000000000000000000000000000000000000008375 194.0
BYD1_k127_9205886_1 Participates in initiation and elongation during chromosome replication K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000003743 183.0
BYD1_k127_9205886_2 Single-stranded DNA-binding protein K03111 - - 0.000000000000000000000000000000000000000000008176 168.0
BYD1_k127_9205886_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000004176 162.0
BYD1_k127_9205886_4 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000001085 117.0
BYD1_k127_9205886_5 Binds together with S18 to 16S ribosomal RNA K02990 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070181,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000003955 91.0
BYD1_k127_9215578_0 ATPases associated with a variety of cellular activities K09691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 436.0
BYD1_k127_9215578_1 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 337.0
BYD1_k127_9215578_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002726 276.0
BYD1_k127_9215578_3 ABC-2 type transporter K01992 - - 0.000000000000000000000000000000000008047 144.0
BYD1_k127_9215578_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000001562 152.0
BYD1_k127_9215578_5 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000007301 146.0
BYD1_k127_9215591_0 PFAM NAD-dependent epimerase dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002807 548.0
BYD1_k127_9215591_1 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 351.0
BYD1_k127_9215591_2 PFAM O-methyltransferase, family 3 - - - 0.00000000000000000000000000000000000000000000000000000000004282 209.0
BYD1_k127_9215591_3 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000003946 206.0
BYD1_k127_9220840_0 lyase activity K11645 GO:0003674,GO:0003824,GO:0004332,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016829,GO:0016830,GO:0016832,GO:0042802,GO:0044424,GO:0044444,GO:0044464 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 541.0
BYD1_k127_9220840_1 glyoxalase bleomycin resistance protein dioxygenase K15975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008553 437.0
BYD1_k127_9220840_10 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000004618 151.0
BYD1_k127_9220840_11 Hemoglobin-like protein K06886 - - 0.00000000000000000000000000000000428 133.0
BYD1_k127_9220840_12 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.0000000000000000000000000000001611 144.0
BYD1_k127_9220840_13 PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - 0.000000000000000000000001781 110.0
BYD1_k127_9220840_15 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 - 3.1.11.2 0.00000000000001684 83.0
BYD1_k127_9220840_16 - - - - 0.000009026 49.0
BYD1_k127_9220840_2 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005018 379.0
BYD1_k127_9220840_3 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 387.0
BYD1_k127_9220840_4 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07305,K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004312 322.0
BYD1_k127_9220840_5 Periplasmic component of the Tol biopolymer transport K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007122 314.0
BYD1_k127_9220840_6 glycosyl transferase group 1 K16150 - 2.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000524 276.0
BYD1_k127_9220840_7 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006595 249.0
BYD1_k127_9220840_8 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000004122 243.0
BYD1_k127_9220840_9 MarC family integral membrane protein K05595 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000001137 229.0
BYD1_k127_9237672_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006114 494.0
BYD1_k127_9237672_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 332.0
BYD1_k127_9237672_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005654 299.0
BYD1_k127_9237672_3 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 289.0
BYD1_k127_9237672_4 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006543 282.0
BYD1_k127_9237672_5 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006159 280.0
BYD1_k127_9237672_6 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000004226 118.0
BYD1_k127_9237672_7 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0000027,GO:0000302,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006950,GO:0006979,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042221,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050896,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1901700,GO:1990904 - 0.00000000009083 64.0
BYD1_k127_9237672_8 Outer membrane lipoprotein - - - 0.000005669 59.0
BYD1_k127_9275877_0 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 302.0
BYD1_k127_9275877_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.00000000000000000000000000000000000000000000000000000000001887 222.0
BYD1_k127_9275877_2 - - - - 0.000000000000000000002386 109.0
BYD1_k127_9275877_3 6-phosphogluconate dehydrogenase, NAD-binding K00020 - 1.1.1.31 0.00000000000001646 75.0
BYD1_k127_9338654_0 GvpD gas vesicle protein K08482 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004966 556.0
BYD1_k127_9338654_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 351.0
BYD1_k127_9338654_2 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002444 289.0
BYD1_k127_9338654_3 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000004466 211.0
BYD1_k127_934002_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06885 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008832,GO:0009056,GO:0009058,GO:0009117,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009151,GO:0009155,GO:0009166,GO:0009200,GO:0009204,GO:0009215,GO:0009217,GO:0009262,GO:0009264,GO:0009394,GO:0009987,GO:0016787,GO:0016788,GO:0016793,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046070,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000001609 241.0
BYD1_k127_934002_1 CYTH domain K01768,K05873 - 4.6.1.1 0.00000000000000000002267 96.0
BYD1_k127_934002_2 PFAM blue (type 1) copper domain protein K00368,K02638 - 1.7.2.1 0.000000000000009413 79.0
BYD1_k127_935185_0 Haemolysin-type calcium-binding repeat (2 copies) - - - 2.847e-267 833.0
BYD1_k127_935185_1 Gkycosyl transferase family 4 group - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 464.0
BYD1_k127_935185_2 response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000001966 243.0
BYD1_k127_935185_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000004057 104.0
BYD1_k127_935185_4 arsR family transcriptional regulator - - - 0.000000000448 68.0
BYD1_k127_9354066_0 Zinc carboxypeptidase - - - 3.59e-223 745.0
BYD1_k127_9354066_1 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 547.0
BYD1_k127_9354066_2 Parallel beta-helix repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 400.0
BYD1_k127_9354066_3 UPF0314 protein - - - 0.0000000000000000000000000000000000000000000000000000000000221 212.0
BYD1_k127_9354066_4 COGs COG5305 membrane protein - - - 0.0000000000000000214 97.0
BYD1_k127_9354066_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000001165 78.0
BYD1_k127_9361526_0 hydrolase activity, acting on ester bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000915 425.0
BYD1_k127_9361526_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009191 431.0
BYD1_k127_9361526_2 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002817 425.0
BYD1_k127_9361526_3 NIF3 (NGG1p interacting factor 3) K22391 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 394.0
BYD1_k127_9361526_4 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 327.0
BYD1_k127_9361526_5 RibD C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001302 249.0
BYD1_k127_9361526_6 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000002459 216.0
BYD1_k127_9361526_7 COG0698 Ribose 5-phosphate isomerase RpiB K01808 - 5.3.1.6 0.00000000000000000000000000000000001626 145.0
BYD1_k127_9361526_8 Low molecular weight phosphatase family - - - 0.000945 43.0
BYD1_k127_9401052_0 COG3263 NhaP-type Na H and K H K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 507.0
BYD1_k127_9401052_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 312.0
BYD1_k127_9401052_2 RNHCP domain - - - 0.000000000000000000000000000000000000000001483 162.0
BYD1_k127_9401052_3 von Willebrand factor, type A K07114 - - 0.00000000000009827 78.0
BYD1_k127_9401052_4 Putative zinc- or iron-chelating domain K06940 - - 0.00004328 51.0
BYD1_k127_9423249_0 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 590.0
BYD1_k127_9423249_1 Cys Met metabolism K01739,K01758 - 2.5.1.48,4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 436.0
BYD1_k127_9425709_0 Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004081 444.0
BYD1_k127_9425709_1 ATPase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 408.0
BYD1_k127_9425709_2 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03086,K03093 - - 0.00000000000000000000000000000000000000008874 163.0
BYD1_k127_9425709_3 methyltransferase - - - 0.0000000000000000000000001817 108.0
BYD1_k127_9492542_0 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 494.0
BYD1_k127_9492542_1 PFAM Phosphoglucomutase phosphomannomutase, alpha beta alpha domain K01840 - 5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002384 369.0
BYD1_k127_9492542_2 ThiF family K03148,K21029 - 2.7.7.73,2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 315.0
BYD1_k127_9492542_3 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000001168 216.0
BYD1_k127_9492542_4 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000001554 208.0
BYD1_k127_9492542_5 EVE domain - - - 0.0000000000000000000000001401 107.0
BYD1_k127_9718295_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 622.0
BYD1_k127_9718295_1 PFAM oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 421.0
BYD1_k127_9718295_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001941 331.0
BYD1_k127_9718295_3 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003398 290.0
BYD1_k127_9718295_4 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000001913 137.0
BYD1_k127_9718295_5 Ribonuclease K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.000000000000000000000000000000001377 138.0
BYD1_k127_9718295_7 - - - - 0.0000000000008448 68.0
BYD1_k127_9718295_8 - K07164 - - 0.0000000002418 73.0
BYD1_k127_9718295_9 ORF located using Blastx - - - 0.000001867 51.0
BYD1_k127_975037_0 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K05825 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004339 323.0
BYD1_k127_975037_1 Permease YjgP YjgQ family K11720 - - 0.000000000000000001442 97.0
BYD1_k127_975037_2 Permease YjgP YjgQ family K07091 - - 0.00000000000108 81.0
BYD1_k127_9778036_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008089 501.0
BYD1_k127_9778036_1 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 481.0
BYD1_k127_9778036_2 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 306.0
BYD1_k127_9778036_3 Protein of unknown function (DUF2959) - - - 0.000000000000000000000000000000000000000000000000000000000000009231 222.0
BYD1_k127_9778036_4 Catalyzes the dehydration of chorismate into 3- (1- carboxyvinyl)oxy benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11782 - 4.2.1.151 0.00000000000000000000000000000000000000000000000000007646 196.0
BYD1_k127_9778036_5 Belongs to the Fur family K03711 - - 0.0000000000000000000001315 104.0
BYD1_k127_9778036_6 Trypsin-like peptidase domain - - - 0.00000000000000000008651 94.0
BYD1_k127_9778036_7 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000004895 94.0
BYD1_k127_9807123_0 Fumarylacetoacetase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006806 362.0
BYD1_k127_9807123_1 phosphopantothenoylcysteine decarboxylase activity K01598,K13038,K21977 - 4.1.1.36,6.3.2.5 0.00000000000000000000000002466 120.0
BYD1_k127_9807123_2 Proteins of 100 residues with WXG - - - 0.00000000000000000002025 93.0
BYD1_k127_9807123_3 - - - - 0.00000000005202 74.0
BYD1_k127_9807123_4 - - - - 0.00001403 53.0
BYD1_k127_9820275_0 serine-type peptidase activity K08676 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004499 485.0
BYD1_k127_9823262_0 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000005576 207.0
BYD1_k127_9823262_1 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000009833 96.0
BYD1_k127_9823262_2 - - - - 0.00008133 54.0
BYD1_k127_9842441_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01354 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0016787,GO:0017171,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0070011,GO:0070012,GO:0071704,GO:0140096,GO:1901564 3.4.21.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004524 569.0
BYD1_k127_9842441_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006266 513.0
BYD1_k127_9842441_10 - K01992 - - 0.00000000000000000000000000000000000000004056 172.0
BYD1_k127_9842441_11 HflC and HflK could encode or regulate a protease K04088 - - 0.0001021 55.0
BYD1_k127_9842441_2 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 498.0
BYD1_k127_9842441_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 376.0
BYD1_k127_9842441_4 ABC-type multidrug transport system ATPase K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 362.0
BYD1_k127_9842441_5 Non-essential cell division protein that could be required for efficient cell constriction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009653 260.0
BYD1_k127_9842441_6 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01534,K17686 - 3.6.3.3,3.6.3.5,3.6.3.54 0.0000000000000000000000000000000000000000000000000000000000000000001068 240.0
BYD1_k127_9842441_7 stress-induced mitochondrial fusion - - - 0.0000000000000000000000000000000000000000000000000000000000001246 238.0
BYD1_k127_9842441_8 HflC and HflK could regulate a protease K04087 - - 0.00000000000000000000000000000000000000000000008202 181.0
BYD1_k127_9842441_9 ABC-type transport system involved in multi-copper enzyme maturation permease component - - - 0.00000000000000000000000000000000000000000008249 183.0
BYD1_k127_9900939_0 ABC transporter K10112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 426.0
BYD1_k127_9900939_1 phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.000000000000000000000000000000000000000000000000001478 196.0
BYD1_k127_9954185_0 leucyltransferase activity K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0044424,GO:0044464,GO:0140096 2.3.2.6 0.000000000000000000000000000000000000000000000000000000001719 210.0
BYD1_k127_9954185_1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000179 59.0
BYD1_k127_9954185_2 Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine) K01562 GO:0003674,GO:0003824,GO:0004800,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006575,GO:0006590,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008430,GO:0009987,GO:0010817,GO:0016020,GO:0016491,GO:0018958,GO:0042403,GO:0042445,GO:0044237,GO:0044464,GO:0055114,GO:0065007,GO:0065008,GO:0071704,GO:0071944,GO:1901360,GO:1901564,GO:1901615 1.21.99.4 0.00000006329 65.0
BYD1_k127_9954185_3 PQQ enzyme repeat K12132 - 2.7.11.1 0.000001148 61.0
BYD1_k127_9956865_0 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 441.0
BYD1_k127_9956865_1 von Willebrand factor, type A K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 404.0
BYD1_k127_9956865_2 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008398 343.0
BYD1_k127_9956865_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000702 263.0
BYD1_k127_9956865_4 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000001814 201.0
BYD1_k127_9956865_5 6-O-methylguanine DNA methyltransferase, DNA binding domain - - - 0.00000000004782 69.0
BYD1_k127_9956865_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000001334 61.0
BYD1_k127_9956865_7 metal-binding protein (DUF2103) - - - 0.0000007485 55.0
BYD1_k127_9956865_8 Protein of unknown function - - - 0.000002603 61.0
BYD1_k127_9956865_9 Protein of unknown function - - - 0.00001032 59.0
BYD1_k127_9956913_0 3-demethylubiquinone-9 3-O-methyltransferase activity K00694,K11936,K20541 - 2.4.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 634.0
BYD1_k127_9956913_1 PFAM NAD-dependent epimerase dehydratase K12454 - 5.1.3.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 499.0
BYD1_k127_9956913_3 Membrane - - - 0.00000000000004915 85.0