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Overview

ID MAG00035
Name BYD1_bin.5
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-39
Genus SCGC-AG-212-J23
Species SCGC-AG-212-J23 sp025929745
Assembly information
Completeness (%) 83.49
Contamination (%) 0.76
GC content (%) 66.0
N50 (bp) 12,356
Genome size (bp) 3,347,252

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3599

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10022098_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 9.272e-212 677.0
BYD1_k127_10022098_1 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 602.0
BYD1_k127_10022098_10 Binding-protein-dependent transport system inner membrane component K15554 - - 0.000000000000000000000000000000000000000000000000000000000000000000471 239.0
BYD1_k127_10022098_11 Amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000002171 153.0
BYD1_k127_10022098_12 PFAM Acetamidase Formamidase K01455 - 3.5.1.49 0.00000000000000000000000000000002154 128.0
BYD1_k127_10022098_13 NMT1-like family K02051 - - 0.000000000000000000000000000001144 139.0
BYD1_k127_10022098_14 formamidase K01455 - 3.5.1.49 0.0000007245 51.0
BYD1_k127_10022098_15 Histidine kinase - - - 0.000005413 55.0
BYD1_k127_10022098_2 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 556.0
BYD1_k127_10022098_3 NMT1-like family K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 439.0
BYD1_k127_10022098_4 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 379.0
BYD1_k127_10022098_5 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 341.0
BYD1_k127_10022098_6 ABC transporter permease K02050,K15554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 342.0
BYD1_k127_10022098_7 oxidation-reduction process K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 310.0
BYD1_k127_10022098_8 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006656 296.0
BYD1_k127_10022098_9 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000163 255.0
BYD1_k127_10024691_0 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 4.799e-242 754.0
BYD1_k127_10024691_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 550.0
BYD1_k127_10024691_2 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 359.0
BYD1_k127_10024691_3 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 307.0
BYD1_k127_10024691_4 NUDIX domain K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000001001 205.0
BYD1_k127_10024691_5 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000003687 208.0
BYD1_k127_10024691_6 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.000000000000000000000001135 105.0
BYD1_k127_10029448_0 L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 487.0
BYD1_k127_10029448_1 2-keto-4-pentenoate hydratase - - - 0.0000000000000000000000000000000000000000000000000000000002358 211.0
BYD1_k127_10029448_2 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000002652 195.0
BYD1_k127_10029448_3 Protein of unknown function (DUF2799) - - - 0.0000000125 61.0
BYD1_k127_10029448_4 Protein of unknown function (DUF2799) - - - 0.0000004761 55.0
BYD1_k127_10032638_0 Histidine Phosphotransfer domain K02487,K06596 - - 9.604e-312 1011.0
BYD1_k127_10032638_1 Methyl-accepting chemotaxis protein K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 624.0
BYD1_k127_10032638_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 413.0
BYD1_k127_10032638_3 Receptor family ligand binding region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008076 398.0
BYD1_k127_10032638_4 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000002656 221.0
BYD1_k127_10032638_5 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000001849 120.0
BYD1_k127_10032638_6 PFAM CheW domain protein K02659 - - 0.000000005181 59.0
BYD1_k127_10050936_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 5.172e-315 982.0
BYD1_k127_10050936_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.756e-242 771.0
BYD1_k127_10050936_2 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004373 550.0
BYD1_k127_10050936_3 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002727 263.0
BYD1_k127_10050936_4 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000428 212.0
BYD1_k127_10050936_5 PFAM Xylose isomerase domain protein TIM barrel - - - 0.0000000000000000000000000000000000000000000000007175 182.0
BYD1_k127_10050936_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000003306 136.0
BYD1_k127_10050936_7 phosphohistidine phosphatase K08296 - - 0.000000000000000000000000000000006094 130.0
BYD1_k127_10050936_8 DoxX K15977 - - 0.000000000000000000000000000001288 126.0
BYD1_k127_1006147_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 8.4e-323 996.0
BYD1_k127_1006147_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 358.0
BYD1_k127_1006147_2 4,5-dihydroxyphthalate decarboxylase K04102 - 4.1.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 352.0
BYD1_k127_1006147_3 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005247 248.0
BYD1_k127_1006147_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006064 254.0
BYD1_k127_1006147_5 Methyltransferase - - - 0.0000000000000000000000000000000000000002659 157.0
BYD1_k127_1008429_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 2.725e-220 697.0
BYD1_k127_1008429_1 peptidase m48, ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005437 449.0
BYD1_k127_1008429_2 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 291.0
BYD1_k127_1008429_3 Chromate resistance exported protein - - - 0.000000000000000000000000000000000000000000000000000000000000000005279 238.0
BYD1_k127_1008429_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000006675 206.0
BYD1_k127_1008429_5 Haem-degrading - - - 0.00000000000000000000000000000000000000000000000003374 187.0
BYD1_k127_1008429_6 sulfur oxidation protein SoxY K17226 - - 0.000000000000000000000000000000000000007748 153.0
BYD1_k127_1008429_7 Sulfurtransferase TusA K04085 - - 0.00000000000000000000000000000002518 127.0
BYD1_k127_1008429_8 Cytochrome c K17223 - - 0.00000000000000000000000007758 119.0
BYD1_k127_1008429_9 Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000004564 90.0
BYD1_k127_10116185_0 Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source K05396,K17950 GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016829,GO:0016846,GO:0019752,GO:0019842,GO:0030170,GO:0034011,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575 4.4.1.15,4.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 315.0
BYD1_k127_10116185_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008334 316.0
BYD1_k127_10116185_2 COG2206 HD-GYP domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004871 283.0
BYD1_k127_10116185_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000001204 167.0
BYD1_k127_10116185_4 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000001162 103.0
BYD1_k127_10116185_5 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000152 75.0
BYD1_k127_10148368_0 Extracellular ligand-binding receptor K01999 - - 3.297e-201 649.0
BYD1_k127_10148368_1 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 412.0
BYD1_k127_10148368_10 KR domain - - - 0.0000000000000000000000000000000000000000000000000000001187 209.0
BYD1_k127_10148368_11 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K01995 - - 0.0000000000000000000000000000000000000000000000000000004477 203.0
BYD1_k127_10148368_12 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000001666 116.0
BYD1_k127_10148368_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007255 408.0
BYD1_k127_10148368_3 methylmalonate-semialdehyde dehydrogenase K00140 - 1.2.1.18,1.2.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005962 379.0
BYD1_k127_10148368_4 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 320.0
BYD1_k127_10148368_5 PFAM 6-phosphogluconate dehydrogenase NAD-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004303 310.0
BYD1_k127_10148368_6 NAD dependent epimerase/dehydratase family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 288.0
BYD1_k127_10148368_7 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008327 273.0
BYD1_k127_10148368_8 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002035 252.0
BYD1_k127_10148368_9 Sugar isomerase (SIS) - - - 0.0000000000000000000000000000000000000000000000000000000000000004848 231.0
BYD1_k127_10173671_0 oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 538.0
BYD1_k127_10173671_1 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 530.0
BYD1_k127_10173671_2 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 417.0
BYD1_k127_10173671_3 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002814 347.0
BYD1_k127_10173671_4 PFAM amidohydrolase 2 K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 338.0
BYD1_k127_10173671_5 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 329.0
BYD1_k127_10173671_6 inositol 2-dehydrogenase activity K18106 - - 0.0000000000000000000000000000000000000000000000000008618 187.0
BYD1_k127_10173671_7 Domain of unknown function (DUF4189) - - - 0.000000000000000536 83.0
BYD1_k127_10208322_0 AMP-binding enzyme K01895 - 6.2.1.1 2.962e-243 762.0
BYD1_k127_10208322_1 Ammonium Transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 566.0
BYD1_k127_10208322_10 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 301.0
BYD1_k127_10208322_11 Leucyl/phenylalanyl-tRNA protein transferase K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006655 290.0
BYD1_k127_10208322_12 Nudix N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003823 273.0
BYD1_k127_10208322_13 Polysaccharide deacetylase K22278 - 3.5.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000119 273.0
BYD1_k127_10208322_14 Pfam:Methyltransf_6 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005311 261.0
BYD1_k127_10208322_15 plastoquinol--plastocyanin reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006868 260.0
BYD1_k127_10208322_16 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000008125 274.0
BYD1_k127_10208322_17 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000003453 258.0
BYD1_k127_10208322_18 Binding-protein-dependent transport system inner membrane component K02054 - - 0.00000000000000000000000000000000000000000000000000000285 201.0
BYD1_k127_10208322_19 DinB family - - - 0.000000000000000000000000000000000000000000000000007771 185.0
BYD1_k127_10208322_2 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003083 490.0
BYD1_k127_10208322_20 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000004818 189.0
BYD1_k127_10208322_21 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000000007776 172.0
BYD1_k127_10208322_22 Binding-protein-dependent transport systems inner membrane component - - - 0.0000000000000000000000000000000000000000000004276 186.0
BYD1_k127_10208322_23 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000009114 125.0
BYD1_k127_10208322_24 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000008037 117.0
BYD1_k127_10208322_25 Cytochrome c - - - 0.00000000000000000000000008827 111.0
BYD1_k127_10208322_26 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000001317 113.0
BYD1_k127_10208322_27 Cupin domain - - - 0.000000000000000000001377 98.0
BYD1_k127_10208322_28 Thioesterase-like superfamily - - - 0.000000000000000001033 93.0
BYD1_k127_10208322_29 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000007001 68.0
BYD1_k127_10208322_3 Psort location Cytoplasmic, score 7.50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004667 417.0
BYD1_k127_10208322_30 PFAM Cupin 2 conserved barrel domain protein - - - 0.00000005602 57.0
BYD1_k127_10208322_4 Dihydroorotate dehydrogenase K00254 - 1.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004031 388.0
BYD1_k127_10208322_5 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002606 358.0
BYD1_k127_10208322_6 taurine catabolism dioxygenase K03119 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006609 344.0
BYD1_k127_10208322_7 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 317.0
BYD1_k127_10208322_8 Belongs to the ABC transporter superfamily K02010,K02052 - 3.6.3.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 319.0
BYD1_k127_10208322_9 Amidohydrolase K10221 - 3.1.1.57 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 310.0
BYD1_k127_10237761_0 tungstate binding K02020 - - 0.00000000000000000000000000000000000000000002299 170.0
BYD1_k127_10237761_1 peptidase - - - 0.000000000000000000000000000000000000673 148.0
BYD1_k127_10237761_2 Thiamine pyrophosphate enzyme, central domain - - - 0.00000000000000000000000000000003105 132.0
BYD1_k127_10237761_3 Sugar transferase K21303 - 2.7.8.40 0.00000363 55.0
BYD1_k127_10245744_0 DNA ligase K01971 - 6.5.1.1 9.219e-228 730.0
BYD1_k127_10245744_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 7.625e-215 674.0
BYD1_k127_10245744_10 - - - - 0.00000000000000000000000000000005165 131.0
BYD1_k127_10245744_12 ribosome binding - - - 0.0000003494 61.0
BYD1_k127_10245744_2 His Kinase A (phosphoacceptor) domain - - - 3.615e-201 659.0
BYD1_k127_10245744_3 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 614.0
BYD1_k127_10245744_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 513.0
BYD1_k127_10245744_5 PFAM MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 526.0
BYD1_k127_10245744_6 aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 468.0
BYD1_k127_10245744_7 CoA-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 367.0
BYD1_k127_10245744_8 ROK family K00845,K00886 - 2.7.1.2,2.7.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002856 290.0
BYD1_k127_10245744_9 Protein of unknown function (DUF421) - - - 0.0000000000000000000000000000000000000000000002245 172.0
BYD1_k127_10291587_0 mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 302.0
BYD1_k127_10291587_1 - - - - 0.000000000000000000006185 97.0
BYD1_k127_10291587_2 Histidine kinase-like ATPase domain - - - 0.000000000000000000009335 102.0
BYD1_k127_10291587_3 - - - - 0.00000000000000001977 87.0
BYD1_k127_10291587_4 - - - - 0.000000000000004177 83.0
BYD1_k127_10291587_6 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000006405 56.0
BYD1_k127_10304142_0 indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 1.03e-293 931.0
BYD1_k127_10304142_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 542.0
BYD1_k127_10304142_10 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005452 252.0
BYD1_k127_10304142_11 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001678 241.0
BYD1_k127_10304142_12 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000003493 224.0
BYD1_k127_10304142_13 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000156 235.0
BYD1_k127_10304142_14 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000004576 203.0
BYD1_k127_10304142_2 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004272 539.0
BYD1_k127_10304142_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 538.0
BYD1_k127_10304142_4 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005494 462.0
BYD1_k127_10304142_5 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 442.0
BYD1_k127_10304142_6 Domain of unknown function (DUF4147) K11529 - 2.7.1.165 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 445.0
BYD1_k127_10304142_7 Taurine catabolism dioxygenase TauD, TfdA family K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 364.0
BYD1_k127_10304142_8 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 303.0
BYD1_k127_10304142_9 esterase K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005517 284.0
BYD1_k127_10313716_0 glutaminyl-tRNA K01886 - 6.1.1.18 9.098e-247 772.0
BYD1_k127_10313716_1 FtsX-like permease family K02004 - - 8.871e-225 722.0
BYD1_k127_10313716_10 metal-dependent hydrolase with the TIM-barrel fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005488 278.0
BYD1_k127_10313716_11 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000003961 239.0
BYD1_k127_10313716_12 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000006655 158.0
BYD1_k127_10313716_13 Solute carrier family 35 - - - 0.00000000000000000000000000000000000000003414 163.0
BYD1_k127_10313716_14 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000002428 139.0
BYD1_k127_10313716_15 Protein of unknown function (DUF3568) - - - 0.0000000000000000002503 98.0
BYD1_k127_10313716_16 Rubrerythrin - - - 0.00000000149 66.0
BYD1_k127_10313716_2 Cytochrome P450 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 484.0
BYD1_k127_10313716_3 Ketopantoate reductase PanE/ApbA C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 428.0
BYD1_k127_10313716_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 415.0
BYD1_k127_10313716_5 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 379.0
BYD1_k127_10313716_6 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 366.0
BYD1_k127_10313716_7 Thioredoxin-like K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003509 337.0
BYD1_k127_10313716_8 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 319.0
BYD1_k127_10313716_9 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008255 282.0
BYD1_k127_10324693_0 Uncharacterized protein conserved in bacteria (DUF2090) K03338 - 2.7.1.92 2.813e-301 942.0
BYD1_k127_10324693_1 TIGRFAM TRAP transporter, DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 603.0
BYD1_k127_10324693_10 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 384.0
BYD1_k127_10324693_11 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005168 377.0
BYD1_k127_10324693_12 ABC transporter ATP-binding protein K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 316.0
BYD1_k127_10324693_13 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000001634 233.0
BYD1_k127_10324693_14 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000006007 220.0
BYD1_k127_10324693_15 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000006861 219.0
BYD1_k127_10324693_16 - - - - 0.0000000000000000000000000000000000000000000000000000000009309 209.0
BYD1_k127_10324693_17 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000001587 204.0
BYD1_k127_10324693_18 Bacterial regulatory proteins, tetR family K09017 - - 0.000000000000000000000000000000000000000000000000001777 190.0
BYD1_k127_10324693_19 Cupin domain - - - 0.000000000000000000000000000002623 132.0
BYD1_k127_10324693_2 PFAM oxidoreductase domain protein K19181 - 1.1.1.292 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004311 532.0
BYD1_k127_10324693_20 Xylose isomerase - - - 0.000000000000008846 76.0
BYD1_k127_10324693_21 enzyme involved in inositol metabolism K03337 - 5.3.1.30 0.00000000000004292 75.0
BYD1_k127_10324693_3 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004103 514.0
BYD1_k127_10324693_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 433.0
BYD1_k127_10324693_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 436.0
BYD1_k127_10324693_6 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 426.0
BYD1_k127_10324693_7 Xylose isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 399.0
BYD1_k127_10324693_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 401.0
BYD1_k127_10324693_9 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007445 385.0
BYD1_k127_10354372_0 efflux pump K18138,K18146 - - 4.487e-299 932.0
BYD1_k127_10354372_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000877 325.0
BYD1_k127_10354372_2 Asp/Glu/Hydantoin racemase K01779 - 5.1.1.13 0.000000000000008361 74.0
BYD1_k127_1037941_0 Ring hydroxylating alpha subunit (catalytic domain) - - - 4.954e-207 650.0
BYD1_k127_1037941_1 Mo-co oxidoreductase dimerisation domain K17225 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 612.0
BYD1_k127_1037941_2 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 304.0
BYD1_k127_1037941_3 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009264 300.0
BYD1_k127_1037941_4 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000000000000003137 236.0
BYD1_k127_1037941_5 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.0000000000000000000000000000000000000000000000000000000000000000004124 237.0
BYD1_k127_1037941_6 ABC transporter substrate binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000123 229.0
BYD1_k127_1037941_7 Aromatic-ring-hydroxylating dioxygenase beta subunit K16969 - 1.14.13.111 0.0000000000000000000000000000000000000000000005434 173.0
BYD1_k127_10398086_0 AAA ATPase domain K01768 - 4.6.1.1 4.029e-293 930.0
BYD1_k127_10398086_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 621.0
BYD1_k127_10398086_10 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005666 256.0
BYD1_k127_10398086_11 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004987 248.0
BYD1_k127_10398086_12 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 0.000000000000000000000000000000000000000000000000000007825 191.0
BYD1_k127_10398086_13 decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000001699 190.0
BYD1_k127_10398086_14 Hydrolase, P-loop family K06925 - - 0.00000000000000000000000000000000000000002425 157.0
BYD1_k127_10398086_15 Protein of Unknown function (DUF2784) - - - 0.000000000000000000001966 102.0
BYD1_k127_10398086_16 protein conserved in bacteria - - - 0.0000000000000002072 83.0
BYD1_k127_10398086_2 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 497.0
BYD1_k127_10398086_3 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003367 449.0
BYD1_k127_10398086_4 IPP transferase K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009825 357.0
BYD1_k127_10398086_5 dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 316.0
BYD1_k127_10398086_6 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 297.0
BYD1_k127_10398086_7 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002652 276.0
BYD1_k127_10398086_8 SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004119 266.0
BYD1_k127_10398086_9 AhpC/TSA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001224 264.0
BYD1_k127_10441880_0 ABC transporter K06147,K18893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 548.0
BYD1_k127_10441880_1 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 453.0
BYD1_k127_10441880_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 344.0
BYD1_k127_10441880_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 303.0
BYD1_k127_10441880_4 Belongs to the HpcH HpaI aldolase family K00979,K02510 - 2.7.7.38,4.1.2.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000452 285.0
BYD1_k127_10441880_5 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000001987 230.0
BYD1_k127_10441880_6 Domain of unknown function (DUF1932) K00020 - 1.1.1.31 0.00000000000000000000000000000000004669 145.0
BYD1_k127_10486914_0 Bacterial extracellular solute-binding protein K02027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 521.0
BYD1_k127_10486914_1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 317.0
BYD1_k127_10496965_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008554 372.0
BYD1_k127_10496965_1 PFAM Extradiol ring-cleavage dioxygenase, class III K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007871 355.0
BYD1_k127_10496965_2 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 342.0
BYD1_k127_10496965_3 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003783 280.0
BYD1_k127_10496965_4 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.0000000000000000000000000000002173 131.0
BYD1_k127_10496965_5 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000001442 59.0
BYD1_k127_10548179_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 502.0
BYD1_k127_10548179_1 Membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 388.0
BYD1_k127_10548179_2 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 334.0
BYD1_k127_10548179_3 protein affecting Mg2 Co2 transport K06195 - - 0.0000000000000000000000000000000000000000000000000000007614 196.0
BYD1_k127_10574381_0 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007512 431.0
BYD1_k127_10574381_1 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000003505 242.0
BYD1_k127_10574381_2 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000000000000001752 237.0
BYD1_k127_10574381_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000003833 215.0
BYD1_k127_10574381_4 two component, sigma54 specific, transcriptional regulator, Fis family - - - 0.000000000000000000000000157 116.0
BYD1_k127_10574381_5 - - - - 0.00000000007233 63.0
BYD1_k127_10597253_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1289.0
BYD1_k127_10597253_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 2.965e-255 802.0
BYD1_k127_10597253_10 PFAM binding-protein-dependent transport systems inner membrane component K05773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 289.0
BYD1_k127_10597253_11 Bacterial extracellular solute-binding protein K02020 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009311 276.0
BYD1_k127_10597253_12 ABC transporter K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000431 260.0
BYD1_k127_10597253_13 Transcriptional regulator of molybdate metabolism, LysR family protein - - - 0.000000000000000000000000000000000000000000000000000000000000003759 229.0
BYD1_k127_10597253_14 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.000000000000000000000000000000000000000000000000000000000000009473 219.0
BYD1_k127_10597253_15 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000003775 223.0
BYD1_k127_10597253_16 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000003226 191.0
BYD1_k127_10597253_17 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000004666 168.0
BYD1_k127_10597253_18 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000001189 113.0
BYD1_k127_10597253_19 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000001092 94.0
BYD1_k127_10597253_2 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 515.0
BYD1_k127_10597253_3 chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003352 439.0
BYD1_k127_10597253_4 Protein of unknown function (DUF3641) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 427.0
BYD1_k127_10597253_5 COG2998 ABC-type tungstate transport system, permease component K05772 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 389.0
BYD1_k127_10597253_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 377.0
BYD1_k127_10597253_7 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 365.0
BYD1_k127_10597253_8 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009817 326.0
BYD1_k127_10597253_9 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008951 302.0
BYD1_k127_1060151_0 oxidase, subunit II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 377.0
BYD1_k127_1060151_1 Mo-co oxidoreductase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000557 277.0
BYD1_k127_1060151_2 Cytochrome bd terminal oxidase subunit I K00425 - 1.10.3.14 0.0000000003559 61.0
BYD1_k127_10751486_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 3.838e-308 962.0
BYD1_k127_10751486_1 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 441.0
BYD1_k127_10751486_2 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00003657 46.0
BYD1_k127_1081063_0 Periplasmic binding protein K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007306 629.0
BYD1_k127_1081063_1 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 540.0
BYD1_k127_1081063_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005951 510.0
BYD1_k127_1081063_3 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 449.0
BYD1_k127_1081063_4 amino acid transport system, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 427.0
BYD1_k127_1081063_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003189 371.0
BYD1_k127_1081063_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007691 338.0
BYD1_k127_1081063_7 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000001735 237.0
BYD1_k127_1081063_8 Fe-S protein K06938 - - 0.000000000000002566 77.0
BYD1_k127_10816517_0 Protein conserved in bacteria K07793 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 584.0
BYD1_k127_10816517_1 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007698 498.0
BYD1_k127_10816517_10 Oxidoreductase domain protein - - - 0.0000000000000000000000000000001044 127.0
BYD1_k127_10816517_11 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000001211 108.0
BYD1_k127_10816517_12 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000001475 90.0
BYD1_k127_10816517_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000008908 85.0
BYD1_k127_10816517_14 Xylose isomerase-like TIM barrel K18910 - 5.1.3.30,5.1.3.31 0.0000000000003293 79.0
BYD1_k127_10816517_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 479.0
BYD1_k127_10816517_3 Mandelate Racemase Muconate Lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 480.0
BYD1_k127_10816517_4 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000794 385.0
BYD1_k127_10816517_5 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 372.0
BYD1_k127_10816517_6 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 358.0
BYD1_k127_10816517_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 291.0
BYD1_k127_10816517_8 transcriptional regulator K09017 - - 0.00000000000000000000000000000000000000000000000000000000000000003709 240.0
BYD1_k127_10816517_9 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000006757 202.0
BYD1_k127_10826417_0 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 409.0
BYD1_k127_10826417_1 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 297.0
BYD1_k127_10826417_2 Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005889 300.0
BYD1_k127_10826417_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000003926 248.0
BYD1_k127_10826417_4 Belongs to the UPF0234 family K09767 - - 0.00000000000000000000000000000000000000000000000000000000000009658 222.0
BYD1_k127_10826417_5 Aspartyl protease K06985 - - 0.00000000000000000000000000000000000000000000000000000001312 205.0
BYD1_k127_10826417_6 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.00000000000000000000000000000000000000000002284 164.0
BYD1_k127_10880392_0 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004478 480.0
BYD1_k127_10880392_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000928 321.0
BYD1_k127_10880392_2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000005704 75.0
BYD1_k127_109469_0 ACT domain K00928 GO:0003674,GO:0003824,GO:0004072,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0019202,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 596.0
BYD1_k127_109469_1 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003239 430.0
BYD1_k127_109469_2 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 317.0
BYD1_k127_109469_3 Trypsin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009656 272.0
BYD1_k127_109469_4 PAS fold - - - 0.0000000000000000000000000000000002451 143.0
BYD1_k127_10968269_0 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 6.512e-212 679.0
BYD1_k127_10968269_1 ribosomal rna small subunit methyltransferase - - - 2.891e-197 629.0
BYD1_k127_10968269_10 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 295.0
BYD1_k127_10968269_11 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001679 259.0
BYD1_k127_10968269_12 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000517 210.0
BYD1_k127_10968269_13 Cobalamin synthesis protein cobW C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000001069 211.0
BYD1_k127_10968269_14 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000004724 201.0
BYD1_k127_10968269_15 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000001814 178.0
BYD1_k127_10968269_16 epimerase - - - 0.000000000000000000000000000000000000001189 157.0
BYD1_k127_10968269_17 MarR family - - - 0.000000000000000000000000000000005086 134.0
BYD1_k127_10968269_18 - - - - 0.0000000000001472 72.0
BYD1_k127_10968269_19 Cupin 2, conserved barrel domain protein - - - 0.0000006749 59.0
BYD1_k127_10968269_2 cysteine synthase K01697 - 4.2.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 611.0
BYD1_k127_10968269_20 TonB C terminal K03646 - - 0.00001009 56.0
BYD1_k127_10968269_3 LVIVD repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 559.0
BYD1_k127_10968269_4 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01758 - 4.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006636 559.0
BYD1_k127_10968269_5 PFAM EAL domain, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 490.0
BYD1_k127_10968269_6 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 321.0
BYD1_k127_10968269_7 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005318 318.0
BYD1_k127_10968269_8 PFAM peptidase M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 308.0
BYD1_k127_10968269_9 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 309.0
BYD1_k127_10981767_0 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 1.735e-216 679.0
BYD1_k127_10981767_1 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 605.0
BYD1_k127_10981767_10 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000000000005018 267.0
BYD1_k127_10981767_11 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000008353 231.0
BYD1_k127_10981767_12 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.00000000000000000000000000000000000000000000000000000000004496 211.0
BYD1_k127_10981767_13 Protein of unknown function (DUF3299) K09950 - - 0.0000000000000000000000000000000000000000002564 164.0
BYD1_k127_10981767_14 - - - - 0.00000000000000000005627 91.0
BYD1_k127_10981767_15 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000006669 91.0
BYD1_k127_10981767_2 Cobalamin synthesis protein cobW C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004905 466.0
BYD1_k127_10981767_3 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 457.0
BYD1_k127_10981767_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006726 387.0
BYD1_k127_10981767_5 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 389.0
BYD1_k127_10981767_6 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 354.0
BYD1_k127_10981767_7 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 325.0
BYD1_k127_10981767_8 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 312.0
BYD1_k127_10981767_9 PFAM oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001137 271.0
BYD1_k127_11003051_0 PFAM ABC-1 domain protein K03688 - - 1.163e-220 697.0
BYD1_k127_11003051_1 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008454 439.0
BYD1_k127_11003051_2 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001986 337.0
BYD1_k127_11003051_3 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000989 280.0
BYD1_k127_11003051_4 - - - - 0.00000000000000000000000000000000004279 142.0
BYD1_k127_11004235_0 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008418 309.0
BYD1_k127_11004235_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.00000000000000000000000000000000000000000000000000000002171 201.0
BYD1_k127_11004235_2 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000005023 196.0
BYD1_k127_11004235_3 Helix-turn-helix XRE-family like proteins K21498 - - 0.000000000000000000000000000003988 121.0
BYD1_k127_11004235_4 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.00000000000000000000000000003885 119.0
BYD1_k127_11004235_5 Bacterial extracellular solute-binding protein K02027 - - 0.0000007176 53.0
BYD1_k127_11025888_0 2-oxoacid ferredoxin oxidoreductase, alpha subunit K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 511.0
BYD1_k127_11025888_1 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 445.0
BYD1_k127_11025888_2 oxidoreductase gamma subunit K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000149 180.0
BYD1_k127_11025888_3 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000001375 155.0
BYD1_k127_11025888_4 - - - - 0.0000000000000000000000006636 108.0
BYD1_k127_11072408_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 3.06e-284 880.0
BYD1_k127_11072408_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.647e-201 636.0
BYD1_k127_11072408_10 Pyrimidine 5''-nucleotidase K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000008263 249.0
BYD1_k127_11072408_11 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000000000001509 228.0
BYD1_k127_11072408_12 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000002227 238.0
BYD1_k127_11072408_13 Bacterial regulatory proteins, tetR family K05501 - - 0.000000000000000000000000000000000000000000000000000000000000007847 220.0
BYD1_k127_11072408_14 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000004774 223.0
BYD1_k127_11072408_15 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000002917 204.0
BYD1_k127_11072408_16 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000000000000000000006571 188.0
BYD1_k127_11072408_17 oxidase assembly K02258 - - 0.00000000000000000000000000000000000000000000000001249 189.0
BYD1_k127_11072408_18 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000005213 166.0
BYD1_k127_11072408_19 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000006881 137.0
BYD1_k127_11072408_2 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 602.0
BYD1_k127_11072408_20 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000004831 124.0
BYD1_k127_11072408_21 Integral membrane protein (DUF2244) - - - 0.00000000000000000002514 99.0
BYD1_k127_11072408_3 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 459.0
BYD1_k127_11072408_4 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 446.0
BYD1_k127_11072408_5 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 429.0
BYD1_k127_11072408_6 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 369.0
BYD1_k127_11072408_7 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004674 369.0
BYD1_k127_11072408_8 ThiF family K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 325.0
BYD1_k127_11072408_9 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003064 315.0
BYD1_k127_11125200_0 DNA internalization-related competence protein ComEC Rec2 K02238 - - 3.161e-208 671.0
BYD1_k127_11125200_1 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 536.0
BYD1_k127_11125200_10 thiosulfate sulfurtransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000009125 212.0
BYD1_k127_11125200_11 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000001364 184.0
BYD1_k127_11125200_12 Cupin domain - - - 0.00000000000000000000000000000000000000000001458 165.0
BYD1_k127_11125200_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000001653 114.0
BYD1_k127_11125200_14 Dodecin K09165 - - 0.00000000000000000000000487 103.0
BYD1_k127_11125200_15 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.000000000000003183 90.0
BYD1_k127_11125200_16 - - - - 0.000706 51.0
BYD1_k127_11125200_2 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009445 509.0
BYD1_k127_11125200_3 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009326 416.0
BYD1_k127_11125200_4 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 374.0
BYD1_k127_11125200_5 acid transport system permease K09970 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 354.0
BYD1_k127_11125200_6 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 320.0
BYD1_k127_11125200_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002106 274.0
BYD1_k127_11125200_8 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000003155 238.0
BYD1_k127_11125200_9 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000000000000000000007208 209.0
BYD1_k127_11190080_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K13482 - 1.17.1.4 5.206e-267 846.0
BYD1_k127_11190080_1 NMT1/THI5 like K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 489.0
BYD1_k127_11190080_10 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 358.0
BYD1_k127_11190080_11 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006566 343.0
BYD1_k127_11190080_12 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003198 337.0
BYD1_k127_11190080_13 Belongs to the GST superfamily K11209 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 307.0
BYD1_k127_11190080_14 deacetylase K01452,K16842,K22278 - 3.5.1.104,3.5.1.41,3.5.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 299.0
BYD1_k127_11190080_15 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006217 275.0
BYD1_k127_11190080_16 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000001785 259.0
BYD1_k127_11190080_17 Acts on guanine, xanthine and to a lesser extent hypoxanthine K00769 - 2.4.2.22 0.000000000000000000000000000000000000000000000000000000000000000000000001482 260.0
BYD1_k127_11190080_18 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000004293 249.0
BYD1_k127_11190080_19 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006139 247.0
BYD1_k127_11190080_2 Peptidase family M28 K02083 - 3.5.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 485.0
BYD1_k127_11190080_20 - - - - 0.00000000000000000000000000000000000000000000000000000000000001227 228.0
BYD1_k127_11190080_21 Xanthine dehydrogenase accessory protein XdhC K07402 - - 0.0000000000000000000000000000000000000000008116 177.0
BYD1_k127_11190080_22 Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily K07127 - 3.5.2.17 0.0000000000000000000000000000000000000008378 151.0
BYD1_k127_11190080_23 PFAM small multidrug resistance protein K11741 - - 0.000000000000000000000000000000000001777 140.0
BYD1_k127_11190080_24 Polysaccharide deacetylase K00365,K01452 GO:0000003,GO:0000272,GO:0003006,GO:0005575,GO:0005618,GO:0005619,GO:0005623,GO:0005631,GO:0005975,GO:0005976,GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006037,GO:0006039,GO:0006040,GO:0006807,GO:0007049,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009272,GO:0009277,GO:0009653,GO:0009987,GO:0010383,GO:0010927,GO:0016043,GO:0016052,GO:0016998,GO:0017144,GO:0019953,GO:0022402,GO:0022411,GO:0022413,GO:0022414,GO:0022607,GO:0030154,GO:0030312,GO:0030435,GO:0030437,GO:0030476,GO:0031160,GO:0031505,GO:0032502,GO:0032505,GO:0032989,GO:0034218,GO:0034232,GO:0034293,GO:0042244,GO:0042546,GO:0042737,GO:0043170,GO:0043934,GO:0043935,GO:0044036,GO:0044085,GO:0044237,GO:0044238,GO:0044247,GO:0044248,GO:0044260,GO:0044262,GO:0044264,GO:0044275,GO:0044277,GO:0044426,GO:0044462,GO:0044464,GO:0044703,GO:0045229,GO:0046348,GO:0048468,GO:0048646,GO:0048856,GO:0048869,GO:0051321,GO:0051704,GO:0070590,GO:0070591,GO:0070726,GO:0070910,GO:0071554,GO:0071555,GO:0071704,GO:0071840,GO:0071852,GO:0071853,GO:0071854,GO:0071940,GO:0071944,GO:0071966,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575,GO:1903046 1.7.3.3,3.5.1.41 0.0000000000000000000000000000000001427 151.0
BYD1_k127_11190080_25 HIUase/Transthyretin family - - - 0.0000000000000000000000000000000002583 135.0
BYD1_k127_11190080_3 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 512.0
BYD1_k127_11190080_4 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 446.0
BYD1_k127_11190080_5 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 413.0
BYD1_k127_11190080_6 Belongs to the amidase family K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 422.0
BYD1_k127_11190080_7 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000683 400.0
BYD1_k127_11190080_8 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000708 397.0
BYD1_k127_11190080_9 Xanthine dehydrogenase small subunit K13481 - 1.17.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 389.0
BYD1_k127_11245194_0 binding-protein-dependent transport systems inner membrane component K02011 - - 3.325e-195 619.0
BYD1_k127_11245194_1 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 489.0
BYD1_k127_11245194_2 Bacterial extracellular solute-binding protein K02012 - - 0.000000000000000000000000000007044 120.0
BYD1_k127_11344379_0 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009924 415.0
BYD1_k127_11344379_1 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 417.0
BYD1_k127_11344379_2 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008243 365.0
BYD1_k127_11344379_3 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 364.0
BYD1_k127_11344379_4 PFAM band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 357.0
BYD1_k127_11344379_5 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002668 269.0
BYD1_k127_11344379_6 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005032 252.0
BYD1_k127_11344379_7 Peptidoglycan-binding lysin domain - - - 0.0000000786 59.0
BYD1_k127_11344379_8 EF hand - - - 0.0005136 48.0
BYD1_k127_11344780_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007931 595.0
BYD1_k127_11344780_1 DNA polymerase III is a complex multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3 to 5 exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 551.0
BYD1_k127_11344780_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001225 281.0
BYD1_k127_11344780_3 binding-protein-dependent transport systems inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009798 283.0
BYD1_k127_11344780_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004946 276.0
BYD1_k127_11344780_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000001019 214.0
BYD1_k127_11344780_6 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.00000000000000000000000000000000000000000001815 164.0
BYD1_k127_11344780_7 Belongs to the ompA family K03286 - - 0.0000000000000000000000006505 111.0
BYD1_k127_11344780_9 - - - - 0.000000499 52.0
BYD1_k127_113523_0 Domain of Unknown Function (DUF748) - - - 6.107e-240 782.0
BYD1_k127_113523_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000001131 176.0
BYD1_k127_113631_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000219 369.0
BYD1_k127_113631_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004943 371.0
BYD1_k127_113631_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007285 280.0
BYD1_k127_113631_3 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000001049 230.0
BYD1_k127_113631_4 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.0000000000000000000000000001258 118.0
BYD1_k127_11429067_0 CoA binding domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001628 584.0
BYD1_k127_11429067_1 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005201 479.0
BYD1_k127_11429067_10 Domain of unknown function (DUF4383) - - - 0.000000000000000000000000000000000002225 144.0
BYD1_k127_11429067_11 PAS fold - - - 0.000000000000000000000000000002431 129.0
BYD1_k127_11429067_12 - - - - 0.000000000000000000000000003271 111.0
BYD1_k127_11429067_13 CsbD-like - - - 0.00000000000000000000000002725 108.0
BYD1_k127_11429067_14 unusual protein kinase K03688 - - 0.000000000000000000000001742 112.0
BYD1_k127_11429067_15 - - - - 0.0000000000000000006948 92.0
BYD1_k127_11429067_16 bacterial OsmY and nodulation domain K04065 - - 0.000000000000008372 81.0
BYD1_k127_11429067_17 Protein of unknown function (DUF1328) - - - 0.0000000000001888 71.0
BYD1_k127_11429067_18 COG0642 Signal transduction histidine kinase - - - 0.000002361 58.0
BYD1_k127_11429067_19 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.00008979 50.0
BYD1_k127_11429067_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999,K11959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 456.0
BYD1_k127_11429067_3 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 430.0
BYD1_k127_11429067_4 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 372.0
BYD1_k127_11429067_5 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 308.0
BYD1_k127_11429067_6 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000000000001387 230.0
BYD1_k127_11429067_7 Branched-chain amino acid transport system permease component K01998 - - 0.000000000000000000000000000000000000000000000000009496 192.0
BYD1_k127_11429067_8 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000000001138 162.0
BYD1_k127_11429067_9 Domain of unknown function (DUF4383) - - - 0.000000000000000000000000000000000000002034 155.0
BYD1_k127_11450096_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 445.0
BYD1_k127_11450096_1 PFAM amidohydrolase 2 K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007292 364.0
BYD1_k127_11450096_2 Amidohydrolase K22213 - 4.1.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 353.0
BYD1_k127_11450096_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000007583 219.0
BYD1_k127_11517018_0 Pfam:KaiC K08482 - - 1.369e-220 698.0
BYD1_k127_11517018_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 540.0
BYD1_k127_11517018_10 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000002119 238.0
BYD1_k127_11517018_11 Periplasmic binding protein domain K01999 - - 0.00000000000000000000000000000000000000000000000000611 186.0
BYD1_k127_11517018_12 Protein of unknown function (DUF3455) - - - 0.00000000000000000000000000000000000000000003058 171.0
BYD1_k127_11517018_13 Globin - - - 0.000000000000000000000000000000000000000004153 162.0
BYD1_k127_11517018_14 KaiB K08481 - - 0.000000000000000000000000000000000000004298 147.0
BYD1_k127_11517018_15 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000006612 153.0
BYD1_k127_11517018_16 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000001367 136.0
BYD1_k127_11517018_17 PAS domain - - - 0.00000000002698 74.0
BYD1_k127_11517018_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 465.0
BYD1_k127_11517018_3 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 447.0
BYD1_k127_11517018_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 421.0
BYD1_k127_11517018_5 Homocysteine S-methyltransferase K00547 - 2.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 416.0
BYD1_k127_11517018_6 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 324.0
BYD1_k127_11517018_7 response regulator receiver K07659 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 299.0
BYD1_k127_11517018_8 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009195 300.0
BYD1_k127_11517018_9 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000001539 242.0
BYD1_k127_11539338_0 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 502.0
BYD1_k127_11539338_1 Alanine dehydrogenase/PNT, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004683 455.0
BYD1_k127_11539338_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 445.0
BYD1_k127_11539338_3 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000753 370.0
BYD1_k127_11539338_4 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000004617 276.0
BYD1_k127_11539338_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000001288 94.0
BYD1_k127_11547128_0 Class II Aldolase and Adducin N-terminal domain - - - 2.393e-266 835.0
BYD1_k127_11547128_1 Ring hydroxylating alpha subunit (catalytic domain) K14748 - - 3.533e-214 671.0
BYD1_k127_11547128_10 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000002294 187.0
BYD1_k127_11547128_11 Aminomethyltransferase folate-binding domain K06980 - - 0.0000000000000000000000000000000000000000000000003986 184.0
BYD1_k127_11547128_12 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000007253 163.0
BYD1_k127_11547128_13 n-acetyltransferase - - - 0.0000000000000000000000000000000000000002011 156.0
BYD1_k127_11547128_14 Ring hydroxylating beta subunit K16303 - 1.14.12.25 0.0000000000000000000000000000000000000004165 158.0
BYD1_k127_11547128_15 Protein of unknown function (DUF1178) - - - 0.00000000000000000000000000000004524 133.0
BYD1_k127_11547128_16 Domain of unknown function (DUF4936) - - - 0.00000000004256 66.0
BYD1_k127_11547128_17 PilZ domain - - - 0.000002814 55.0
BYD1_k127_11547128_2 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004386 388.0
BYD1_k127_11547128_3 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002127 394.0
BYD1_k127_11547128_4 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 374.0
BYD1_k127_11547128_5 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001042 383.0
BYD1_k127_11547128_6 Inorganic pyrophosphatase K01507 - 3.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000002496 232.0
BYD1_k127_11547128_7 DNA polymerase III, delta' K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000001443 225.0
BYD1_k127_11547128_8 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000008768 208.0
BYD1_k127_11547128_9 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000002621 186.0
BYD1_k127_11565267_0 phosphate transport system K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 476.0
BYD1_k127_11565267_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 443.0
BYD1_k127_11565267_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 430.0
BYD1_k127_11565267_3 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006941 402.0
BYD1_k127_11565267_4 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008786 372.0
BYD1_k127_11565267_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 353.0
BYD1_k127_11565267_6 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 302.0
BYD1_k127_11634789_0 AcyL-CoA dehydrogenase K06445 - - 3.23e-236 743.0
BYD1_k127_11634789_1 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.646e-235 745.0
BYD1_k127_11634789_10 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000002198 125.0
BYD1_k127_11634789_2 Belongs to the thiolase family K00626 - 2.3.1.9 3.29e-202 636.0
BYD1_k127_11634789_3 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019752,GO:0020037,GO:0022607,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003115 377.0
BYD1_k127_11634789_4 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002862 271.0
BYD1_k127_11634789_5 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000003496 225.0
BYD1_k127_11634789_6 Thioesterase superfamily K10806 - - 0.000000000000000000000000000000000000000000000000007785 183.0
BYD1_k127_11634789_7 Sulfite exporter TauE/SafE K07090 - - 0.00000000000000000000000000000000000000000000422 173.0
BYD1_k127_11634789_8 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000005366 173.0
BYD1_k127_11634789_9 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000001692 171.0
BYD1_k127_11780398_0 Sulfatase - - - 1.237e-243 761.0
BYD1_k127_11780398_1 Pfam Sulfatase K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 536.0
BYD1_k127_11780398_2 PFAM Mandelate racemase muconate lactonizing enzyme, C-terminal domain K18983 - 5.5.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 441.0
BYD1_k127_11780398_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000004556 71.0
BYD1_k127_11789001_0 4-Hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 552.0
BYD1_k127_11789001_1 Polysaccharide biosynthesis protein K15894 - 4.2.1.115 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 513.0
BYD1_k127_11789001_10 manually curated - - - 0.00000000000000000000000000000001924 128.0
BYD1_k127_11789001_11 - - - - 0.000000000000002114 77.0
BYD1_k127_11789001_12 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.000000000000007223 80.0
BYD1_k127_11789001_2 Cytochrome P450 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 440.0
BYD1_k127_11789001_3 UDP-glucose 4-epimerase K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005089 428.0
BYD1_k127_11789001_4 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 415.0
BYD1_k127_11789001_5 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 362.0
BYD1_k127_11789001_6 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000002849 218.0
BYD1_k127_11789001_7 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000000000000001608 166.0
BYD1_k127_11789001_8 Hepn domain protein - - - 0.00000000000000000000000000000000000000181 150.0
BYD1_k127_11789001_9 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.000000000000000000000000000000004387 133.0
BYD1_k127_11792394_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 2.715e-205 645.0
BYD1_k127_11792394_1 Aminotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 419.0
BYD1_k127_11792394_10 - K11275 - - 0.00003375 50.0
BYD1_k127_11792394_2 Phosphate acetyl butaryl transferase K00029 - 1.1.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000183 379.0
BYD1_k127_11792394_3 Malic enzyme K00029 - 1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003882 284.0
BYD1_k127_11792394_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000394 146.0
BYD1_k127_11792394_5 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 0.00000000000000000000001286 100.0
BYD1_k127_11792394_6 aminotransferase - - - 0.00000000000003585 74.0
BYD1_k127_11792394_7 Protein of unknown function (DUF2442) - - - 0.0000000003068 64.0
BYD1_k127_11792394_8 - - - - 0.000000002 63.0
BYD1_k127_11792394_9 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0033554,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.00001351 55.0
BYD1_k127_11804824_0 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 - 1.1.1.35 4.726e-251 792.0
BYD1_k127_11804824_1 Periplasmic binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 582.0
BYD1_k127_11804824_10 - - - - 0.0000000001098 72.0
BYD1_k127_11804824_2 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 554.0
BYD1_k127_11804824_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 543.0
BYD1_k127_11804824_4 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003748 481.0
BYD1_k127_11804824_5 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 433.0
BYD1_k127_11804824_6 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 430.0
BYD1_k127_11804824_7 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006142 339.0
BYD1_k127_11804824_8 PFAM AMP-dependent synthetase and ligase K20034 - 6.2.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001504 276.0
BYD1_k127_11804824_9 Histidine kinase K07711 - 2.7.13.3 0.000000000000000000000000000000153 125.0
BYD1_k127_11817355_0 Metallopeptidase family M24 - - - 2.962e-206 651.0
BYD1_k127_11817355_1 Amidohydrolase family - - - 5.789e-196 628.0
BYD1_k127_11817355_2 Alcohol dehydrogenase GroES-like domain K00055 - 1.1.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 352.0
BYD1_k127_11817355_3 6-phosphogluconate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 339.0
BYD1_k127_11817355_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002138 300.0
BYD1_k127_11817355_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 295.0
BYD1_k127_11817355_6 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002994 287.0
BYD1_k127_11817355_7 Belongs to the LDH2 MDH2 oxidoreductase family K00073 - 1.1.1.350 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002188 287.0
BYD1_k127_11817355_8 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01032 - 2.8.3.6 0.00000000000000000000000000000000000000000000001102 172.0
BYD1_k127_11843439_0 amino acid K11959 - - 4.306e-231 720.0
BYD1_k127_11843439_1 Branched-chain amino acid transport system / permease component K11961 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 519.0
BYD1_k127_11843439_10 Evidence 2a Function of homologous gene experimentally demonstrated in an other organism K11712 - - 0.000000000000000000000000000000000000000000000000003344 189.0
BYD1_k127_11843439_11 2-dehydro-3-deoxyphosphogluconate aldolase 4-hydroxy-2-oxoglutarate aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000009822 181.0
BYD1_k127_11843439_12 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000001318 180.0
BYD1_k127_11843439_13 Sugar kinases ribokinase family K00874 - 2.7.1.45 0.0000000000000000000001437 103.0
BYD1_k127_11843439_2 Belongs to the binding-protein-dependent transport system permease family K11960 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 521.0
BYD1_k127_11843439_3 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007967 499.0
BYD1_k127_11843439_4 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 432.0
BYD1_k127_11843439_5 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006003 410.0
BYD1_k127_11843439_6 Urea ABC transporter ATP-binding protein urtd K11962 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 370.0
BYD1_k127_11843439_7 ABC transporter, ATP-binding protein K11963 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009048 350.0
BYD1_k127_11843439_8 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03190 - - 0.0000000000000000000000000000000000000000000000000000000000001695 218.0
BYD1_k127_11843439_9 COG2202 FOG PAS PAC domain - - - 0.0000000000000000000000000000000000000000000000000000007175 205.0
BYD1_k127_11855668_0 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003777 335.0
BYD1_k127_11855668_1 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 287.0
BYD1_k127_11855668_2 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000004923 238.0
BYD1_k127_11855668_3 glyoxalase bleomycin resistance protein - - - 0.0000000000000000000000000000000000000000000000004562 178.0
BYD1_k127_11855668_4 PFAM NLP P60 protein - - - 0.0000000000000000000000000000008734 127.0
BYD1_k127_11855668_5 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000001509 119.0
BYD1_k127_11855668_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000001944 121.0
BYD1_k127_11855668_7 GCN5-related N-acetyl-transferase K06975 - - 0.000000000000000000000000009148 111.0
BYD1_k127_11855668_8 ABC transporter K01995 - - 0.0000000000000326 74.0
BYD1_k127_11855668_9 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000002911 72.0
BYD1_k127_11881727_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 378.0
BYD1_k127_11881727_1 Major Facilitator Superfamily - - - 0.000000003329 68.0
BYD1_k127_11881727_2 Protein of unknown function (DUF1223) - - - 0.000000004713 68.0
BYD1_k127_11925800_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 3.143e-245 771.0
BYD1_k127_11925800_1 type II secretion system protein K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007245 513.0
BYD1_k127_11925800_10 - - - - 0.00000000001595 77.0
BYD1_k127_11925800_2 Type II and III secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001632 259.0
BYD1_k127_11925800_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000006417 238.0
BYD1_k127_11925800_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000001767 196.0
BYD1_k127_11925800_5 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000004079 115.0
BYD1_k127_11925800_6 general secretion pathway protein - - - 0.000000000000000002238 99.0
BYD1_k127_11925800_7 - - - - 0.00000000000000002086 91.0
BYD1_k127_11925800_8 Prokaryotic N-terminal methylation motif - - - 0.0000000000000008629 85.0
BYD1_k127_11925800_9 - - - - 0.00000000000002481 82.0
BYD1_k127_11927082_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 569.0
BYD1_k127_11927082_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 399.0
BYD1_k127_11927082_2 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 356.0
BYD1_k127_11927082_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004056 274.0
BYD1_k127_11974414_0 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 7.343e-242 756.0
BYD1_k127_11974414_1 Na Pi-cotransporter II-related protein K03324 - - 4.045e-197 629.0
BYD1_k127_11974414_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K00836 - 2.6.1.19,2.6.1.76 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000799 438.0
BYD1_k127_11974414_3 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003432 279.0
BYD1_k127_11974414_4 Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009143 277.0
BYD1_k127_11974414_5 phosphonate ABC transporter, inner membrane subunit K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004088 262.0
BYD1_k127_11974414_6 phosphonate ABC transporter, inner membrane subunit K02042 - - 0.000000000000000000000000000000000000000000000000000000000000000138 229.0
BYD1_k127_11974414_7 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000004554 74.0
BYD1_k127_11974414_8 domain protein - - - 0.00000006817 65.0
BYD1_k127_12022432_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 542.0
BYD1_k127_12022432_1 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 325.0
BYD1_k127_12022432_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 293.0
BYD1_k127_12022432_3 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000007282 168.0
BYD1_k127_12031467_0 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 422.0
BYD1_k127_12031467_1 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002417 364.0
BYD1_k127_12031467_2 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 358.0
BYD1_k127_12031467_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003242 283.0
BYD1_k127_12031467_4 SMART Cold shock protein K03704 - - 0.00000000000000000000000000004443 119.0
BYD1_k127_12031467_5 Translation initiation factor 1A / IF-1 K02518 - - 0.000000000000000000000000006705 113.0
BYD1_k127_12034025_0 FAD linked oxidase domain protein K06911 - - 0.0 1162.0
BYD1_k127_12034025_1 luciferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003262 323.0
BYD1_k127_12034025_2 response to abiotic stimulus - - - 0.000000000004162 75.0
BYD1_k127_12066995_0 COG4618 ABC-type protease lipase transport system, ATPase and permease components K16299 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001286 523.0
BYD1_k127_12066995_1 Hemolysin-type calcium-binding repeat (2 copies) K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000009824 270.0
BYD1_k127_12066995_2 TIGRFAM type I secretion membrane fusion protein, HlyD family K02022,K12537 - - 0.00000000000000000000000000000000000000000000000568 184.0
BYD1_k127_12066995_3 Haemolysin-type calcium-binding repeat (2 copies) K07004 - - 0.000000000000000000000000000003966 128.0
BYD1_k127_12066995_4 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000008379 96.0
BYD1_k127_12073931_0 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051,K15576 - - 1.955e-228 714.0
BYD1_k127_12073931_1 ATPases associated with a variety of cellular activities K02049,K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 396.0
BYD1_k127_12073931_2 Binding-protein-dependent transport system inner membrane component K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 405.0
BYD1_k127_12073931_3 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001356 280.0
BYD1_k127_12073931_4 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001001 273.0
BYD1_k127_12073931_5 Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide K01725 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0008824,GO:0009056,GO:0009439,GO:0009440,GO:0009987,GO:0016829,GO:0016840,GO:0034641,GO:0044237,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0071704,GO:1901564,GO:1901565,GO:1901575 4.2.1.104 0.00000000000000000000000000000000000000000000000000000000000000000007189 237.0
BYD1_k127_12073931_6 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000002734 203.0
BYD1_k127_12073931_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000001451 172.0
BYD1_k127_12073931_8 cytochrome - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.00000000001071 73.0
BYD1_k127_12073931_9 PFAM Cytochrome c, class I - - - 0.0000001598 52.0
BYD1_k127_12077260_0 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 323.0
BYD1_k127_12077260_1 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001782 274.0
BYD1_k127_12077260_10 Domain of unknown function (DUF4385) - - - 0.000001127 59.0
BYD1_k127_12077260_11 Fatty acid hydroxylase - - - 0.00003313 52.0
BYD1_k127_12077260_2 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000004239 140.0
BYD1_k127_12077260_3 psiF repeat - - - 0.0000000000000000000000000000005745 126.0
BYD1_k127_12077260_4 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000001354 103.0
BYD1_k127_12077260_5 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000002603 98.0
BYD1_k127_12077260_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR - - - 0.000000000000000000189 99.0
BYD1_k127_12077260_7 - - - - 0.0000000000000000006668 95.0
BYD1_k127_12077260_8 Protein of unknown function (DUF3606) - - - 0.0000000001099 66.0
BYD1_k127_12077260_9 PFAM Hemerythrin HHE cation binding domain protein - - - 0.0000000002557 69.0
BYD1_k127_12155886_0 FtsX-like permease family K02004 - - 2.334e-243 781.0
BYD1_k127_12155886_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 514.0
BYD1_k127_12155886_2 Rhodanese Homology Domain K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000161 396.0
BYD1_k127_12155886_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001921 283.0
BYD1_k127_12155886_4 GDSL-like Lipase/Acylhydrolase K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000001071 224.0
BYD1_k127_12155886_5 ParE toxin of type II toxin-antitoxin system, parDE K06218 - - 0.00000000000000000000000000002159 120.0
BYD1_k127_1231444_0 MlrC C-terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 474.0
BYD1_k127_1231444_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009749 261.0
BYD1_k127_1231444_2 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.000000000000000000000000000000000000000000005861 168.0
BYD1_k127_1231444_3 Fe-S assembly protein IscX - - - 0.0000000000000000000000001023 113.0
BYD1_k127_1232826_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 2.343e-233 727.0
BYD1_k127_1232826_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001138 334.0
BYD1_k127_1232826_10 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000005016 186.0
BYD1_k127_1232826_11 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000004358 182.0
BYD1_k127_1232826_12 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000005087 183.0
BYD1_k127_1232826_13 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.0000000000000000000000000000000000000000000005656 173.0
BYD1_k127_1232826_14 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000004252 149.0
BYD1_k127_1232826_15 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.0000000000000000000000000000000000258 138.0
BYD1_k127_1232826_16 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000001381 134.0
BYD1_k127_1232826_17 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.00000000000000000000000000008032 120.0
BYD1_k127_1232826_18 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000001338 83.0
BYD1_k127_1232826_19 Ribosomal protein L30 K02907 - - 0.00000000000000001369 85.0
BYD1_k127_1232826_2 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001412 335.0
BYD1_k127_1232826_20 Ribosomal protein L36 K02919 - - 0.0000000000001808 70.0
BYD1_k127_1232826_21 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000004006 61.0
BYD1_k127_1232826_3 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001945 276.0
BYD1_k127_1232826_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000368 284.0
BYD1_k127_1232826_5 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004682 249.0
BYD1_k127_1232826_6 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000000311 234.0
BYD1_k127_1232826_7 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000001169 229.0
BYD1_k127_1232826_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000001029 221.0
BYD1_k127_1232826_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000000173 214.0
BYD1_k127_1236243_0 type II secretion system protein K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 608.0
BYD1_k127_1236243_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002158 589.0
BYD1_k127_1236243_10 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004102 282.0
BYD1_k127_1236243_11 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002023 267.0
BYD1_k127_1236243_12 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000001116 213.0
BYD1_k127_1236243_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.0000000000000000000000000000000000000000000000000004171 193.0
BYD1_k127_1236243_14 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000008507 124.0
BYD1_k127_1236243_15 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000006666 112.0
BYD1_k127_1236243_16 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000004844 76.0
BYD1_k127_1236243_17 Major facilitator superfamily K08177 - - 0.0000001333 64.0
BYD1_k127_1236243_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 491.0
BYD1_k127_1236243_3 ATPase (AAA K06923 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006388 370.0
BYD1_k127_1236243_4 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 337.0
BYD1_k127_1236243_5 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 333.0
BYD1_k127_1236243_6 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005013 336.0
BYD1_k127_1236243_7 Thiamine monophosphate synthase K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 320.0
BYD1_k127_1236243_8 CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006214 326.0
BYD1_k127_1236243_9 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 299.0
BYD1_k127_126073_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 1.037e-270 841.0
BYD1_k127_126073_1 PFAM Enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001682 285.0
BYD1_k127_126073_2 Reversible hydration of carbon dioxide K01673 GO:0003674,GO:0003824,GO:0004089,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008270,GO:0015976,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914 4.2.1.1 0.00000000000000000000000000000000000003488 148.0
BYD1_k127_1261267_0 Protein of unknown function - - - 1.301e-280 905.0
BYD1_k127_1261267_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 2.243e-269 856.0
BYD1_k127_1261267_10 Zinc-finger domain - - - 0.00000000000000005296 87.0
BYD1_k127_1261267_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 491.0
BYD1_k127_1261267_3 Putative modulator of DNA gyrase K03568 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 456.0
BYD1_k127_1261267_4 heptosyltransferase II K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002475 332.0
BYD1_k127_1261267_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 329.0
BYD1_k127_1261267_6 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000000001329 175.0
BYD1_k127_1261267_7 Protein of unknown function (DUF3047) - - - 0.000000000000000000000000000000000000000003659 165.0
BYD1_k127_1261267_8 SnoaL-like domain - - - 0.000000000000000000000000000000002202 139.0
BYD1_k127_1261267_9 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000007688 93.0
BYD1_k127_1300880_0 PFAM FAD dependent oxidoreductase - - - 1.151e-202 642.0
BYD1_k127_1300880_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 537.0
BYD1_k127_1300880_10 polyketide cyclase - - - 0.00000000000000000000000000001919 121.0
BYD1_k127_1300880_11 Endoribonuclease L-PSP - - - 0.00000000000000000000000000003179 121.0
BYD1_k127_1300880_12 - - - - 0.0000000000000000000006325 100.0
BYD1_k127_1300880_13 Protein of unknown function (DUF2917) - - - 0.000355 46.0
BYD1_k127_1300880_2 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000667 444.0
BYD1_k127_1300880_3 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 404.0
BYD1_k127_1300880_4 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 326.0
BYD1_k127_1300880_5 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 275.0
BYD1_k127_1300880_6 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000006379 208.0
BYD1_k127_1300880_7 Tautomerase enzyme - - - 0.0000000000000000000000000000000000000000002498 162.0
BYD1_k127_1300880_8 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000009322 155.0
BYD1_k127_1300880_9 membrane transporter protein K07090 - - 0.00000000000000000000000000000000001578 144.0
BYD1_k127_1314235_0 protein related to plant photosystem II stability assembly factor - - - 2.71e-205 645.0
BYD1_k127_1314235_1 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002238 295.0
BYD1_k127_1314235_2 UPF0126 domain - - - 0.00000000000000000000000000000000000000000000000000006578 205.0
BYD1_k127_1314235_3 Outer membrane efflux protein - - - 0.0000000000000000000000000000002241 126.0
BYD1_k127_1314235_4 ThiS family K03636 - - 0.000000000000000000000000005546 120.0
BYD1_k127_1314235_5 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000001769 77.0
BYD1_k127_1319116_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 9.653e-287 894.0
BYD1_k127_1319116_1 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 6.237e-228 714.0
BYD1_k127_1319116_2 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 1.298e-209 663.0
BYD1_k127_1319116_3 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147 - - 2.794e-200 640.0
BYD1_k127_1319116_4 glycolate oxidase iron-sulfur subunit K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005516 518.0
BYD1_k127_1319116_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 521.0
BYD1_k127_1319116_6 FAD binding K11472 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 421.0
BYD1_k127_1319116_7 Belongs to the hyi family K01816 - 5.3.1.22 0.000000000000000000000000000000000000000000000000000000443 196.0
BYD1_k127_1319116_8 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000005963 113.0
BYD1_k127_1325514_0 Protein of unknown function (DUF3182) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 361.0
BYD1_k127_1325514_1 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009364 359.0
BYD1_k127_1325514_2 Uncharacterised protein family (UPF0227) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006542 286.0
BYD1_k127_1325514_3 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000001195 250.0
BYD1_k127_1325514_4 - - - - 0.00000000000000000000000000000000000000007351 162.0
BYD1_k127_1325514_5 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000008632 132.0
BYD1_k127_1325514_6 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000001593 117.0
BYD1_k127_1325514_7 - - - - 0.000008553 57.0
BYD1_k127_1325514_8 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.00006038 51.0
BYD1_k127_1352134_0 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.773e-227 709.0
BYD1_k127_1352134_1 E1 component K00164 - 1.2.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 591.0
BYD1_k127_1352134_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 443.0
BYD1_k127_1352134_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004651 427.0
BYD1_k127_1352134_4 Flavinator of succinate dehydrogenase K09159 - - 0.00000003774 64.0
BYD1_k127_1488187_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 2.78e-207 654.0
BYD1_k127_1488187_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002097 517.0
BYD1_k127_1488187_2 Histidine kinase K07716 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 306.0
BYD1_k127_1488187_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000005468 244.0
BYD1_k127_1488187_4 Calcineurin-like phosphoesterase K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000008293 240.0
BYD1_k127_1488187_5 Protein of unknown function (DUF3703) - - - 0.0000000000000000000000000000003269 129.0
BYD1_k127_1488187_6 - - - - 0.00000000000000001023 84.0
BYD1_k127_1509216_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family - - - 2.186e-285 892.0
BYD1_k127_1509216_1 protein conserved in bacteria K07793 - - 1.281e-228 717.0
BYD1_k127_1509216_2 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001945 275.0
BYD1_k127_1509216_3 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000235 225.0
BYD1_k127_1509216_4 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000006943 216.0
BYD1_k127_1509216_5 oxidation-reduction process - - - 0.0000000000000000000000000000000000000000000005885 168.0
BYD1_k127_1509216_6 Protein conserved in bacteria K09931 - - 0.0000000000000000000000000000000000002302 150.0
BYD1_k127_1509216_7 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000009977 108.0
BYD1_k127_151833_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 540.0
BYD1_k127_151833_1 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 342.0
BYD1_k127_151833_2 TRAP dicarboxylate transporter - - - 0.000000000000000000000000000000000000000000000000000000002387 213.0
BYD1_k127_151833_3 transcriptional - - - 0.0000000000000000000000000000000000000000001771 167.0
BYD1_k127_151833_4 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000001752 136.0
BYD1_k127_151833_5 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.00000000000000000000000000001242 135.0
BYD1_k127_151833_6 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.0000000000837 68.0
BYD1_k127_1520458_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2226.0
BYD1_k127_1520458_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2199.0
BYD1_k127_1520458_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000775 166.0
BYD1_k127_1520458_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000005114 90.0
BYD1_k127_1524224_0 ABC transporter K06147,K18893 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006810,GO:0006869,GO:0008150,GO:0010876,GO:0015399,GO:0015405,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022804,GO:0022857,GO:0033036,GO:0034040,GO:0042623,GO:0042626,GO:0043492,GO:0051179,GO:0051234,GO:0055085,GO:0071702 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 295.0
BYD1_k127_1524224_1 chromosome segregation K03497 - - 0.00000000000000000000000000000000000000000000000002109 183.0
BYD1_k127_1524224_2 - - - - 0.0000000000000000000000000000000000004993 153.0
BYD1_k127_1524224_3 Cation transport regulator - - - 0.000000002353 65.0
BYD1_k127_1524532_0 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 430.0
BYD1_k127_1524532_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 430.0
BYD1_k127_1524532_2 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007908 420.0
BYD1_k127_1524532_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003942 272.0
BYD1_k127_1524532_4 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000004145 252.0
BYD1_k127_1524532_5 surface antigen - - - 0.000000000000000000000000256 107.0
BYD1_k127_1551467_0 Fumarate reductase flavoprotein C-term - - - 1.643e-239 754.0
BYD1_k127_1551467_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 9.757e-214 667.0
BYD1_k127_1551467_2 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 346.0
BYD1_k127_1551467_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005618 279.0
BYD1_k127_1551467_4 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000005078 248.0
BYD1_k127_1551467_5 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000001936 145.0
BYD1_k127_1551467_6 Universal stress protein - - - 0.0000000000000000000000000000008112 131.0
BYD1_k127_1551467_7 Universal stress protein - - - 0.0000000000000000000000000000008624 128.0
BYD1_k127_1551467_8 Fumarate reductase subunit C - - - 0.000000000000000000000000001052 123.0
BYD1_k127_1551467_9 Fumarate reductase subunit D - - - 0.0000000000000000006834 89.0
BYD1_k127_1555086_0 AcrB/AcrD/AcrF family K03296,K18138,K18902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 567.0
BYD1_k127_1555086_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18901 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 462.0
BYD1_k127_1555819_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006249 530.0
BYD1_k127_1555819_1 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003544 331.0
BYD1_k127_1555819_2 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 308.0
BYD1_k127_1555819_3 Dehydrogenase K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000003268 237.0
BYD1_k127_1555819_4 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000135 215.0
BYD1_k127_1556312_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 379.0
BYD1_k127_1556312_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000004182 236.0
BYD1_k127_1556312_2 ribosomal large subunit export from nucleus - - - 0.000000000000000000000000000000000000000000000002388 177.0
BYD1_k127_1556312_3 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000009307 87.0
BYD1_k127_1556312_4 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000006224 63.0
BYD1_k127_1556312_5 Phosphotransferase enzyme family - - - 0.0003847 46.0
BYD1_k127_1560946_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 5.667e-218 687.0
BYD1_k127_1560946_1 Protein of unknown function (DUF1343) - - - 5.57e-200 629.0
BYD1_k127_1560946_2 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003175 261.0
BYD1_k127_1560946_3 involved in chromosome partitioning K03496 - - 0.000000000000000000000000000000000000000000007946 173.0
BYD1_k127_1560946_4 Belongs to the CinA family - - - 0.0000000000000000000000000000000000000000002507 163.0
BYD1_k127_1560946_5 - - - - 0.00000000000000000000000000000000000001802 156.0
BYD1_k127_1560946_6 histidine kinase A domain protein - - - 0.000000000000000000000002759 107.0
BYD1_k127_1803438_0 AMP-binding enzyme K12508 - 6.2.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 583.0
BYD1_k127_1803438_1 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 528.0
BYD1_k127_1803438_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 392.0
BYD1_k127_1803438_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002249 345.0
BYD1_k127_1803438_4 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000007723 207.0
BYD1_k127_1818057_0 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 565.0
BYD1_k127_1818057_1 Formate nitrite K02598,K06212 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 334.0
BYD1_k127_1818057_2 Cytochrome C oxidase, mono-heme subunit/FixO K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 327.0
BYD1_k127_1818057_3 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003247 277.0
BYD1_k127_1818057_4 FixH family K09926 - - 0.0000000000000000000000000000000003487 141.0
BYD1_k127_1818057_5 - - - - 0.0000000000000298 79.0
BYD1_k127_1818057_7 Cbb3-type cytochrome oxidase K00407 - - 0.0009594 44.0
BYD1_k127_1835318_0 Allophanate hydrolase subunit 2 K06350 - - 0.000000000000000000000000000000000000000000000000006294 198.0
BYD1_k127_1835318_1 Allophanate hydrolase subunit 1 - - - 0.000000000000000000000000000000000000000000000002313 183.0
BYD1_k127_1835318_2 ORF6N domain - - - 0.00000000000000000000000000000000000000001714 157.0
BYD1_k127_1835318_3 Allophanate hydrolase subunit 2 K01457 - 3.5.1.54 0.00000000000000009176 82.0
BYD1_k127_1882499_0 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 530.0
BYD1_k127_1882499_1 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 472.0
BYD1_k127_1882499_2 Molecular chaperone K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 335.0
BYD1_k127_1882499_3 PFAM Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000006984 216.0
BYD1_k127_1882499_4 Belongs to the ompA family K03286 - - 0.000000000000000000000000000000000000007905 158.0
BYD1_k127_1882499_5 Prokaryotic dksA/traR C4-type zinc finger - - - 0.00000000000000000000001328 109.0
BYD1_k127_1882499_6 Heavy metal transport detoxification protein K07213 - - 0.000000000000001992 79.0
BYD1_k127_1882499_7 - - - - 0.00000001037 59.0
BYD1_k127_1882499_8 Protein of unknown function (DUF2934) - - - 0.0000001827 59.0
BYD1_k127_1992639_0 Amidohydrolase family K01464 - 3.5.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 503.0
BYD1_k127_1992639_1 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 417.0
BYD1_k127_1992639_2 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000003279 192.0
BYD1_k127_1992639_3 Aminotransferase class-V - - - 0.000000000000000000000000000001699 124.0
BYD1_k127_1992639_4 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000002575 111.0
BYD1_k127_2006728_0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase - - - 2.985e-244 760.0
BYD1_k127_2006728_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 582.0
BYD1_k127_2006728_10 Nacht domain - - - 0.000003768 55.0
BYD1_k127_2006728_2 CoA-binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005968 569.0
BYD1_k127_2006728_3 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 396.0
BYD1_k127_2006728_4 PFAM MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004691 353.0
BYD1_k127_2006728_5 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004884 357.0
BYD1_k127_2006728_6 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 293.0
BYD1_k127_2006728_7 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001052 292.0
BYD1_k127_2006728_8 Protein of unknown function (DUF805) - - - 0.000000000000000000000000000000009472 135.0
BYD1_k127_2006728_9 Sterol carrier protein - - - 0.00000000000000000000000008257 110.0
BYD1_k127_2017452_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 6.377e-242 766.0
BYD1_k127_2017452_1 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 6.756e-236 751.0
BYD1_k127_2017452_10 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 322.0
BYD1_k127_2017452_11 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 316.0
BYD1_k127_2017452_12 KR domain K00076,K08081 - 1.1.1.159,1.1.1.206 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003235 308.0
BYD1_k127_2017452_13 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 304.0
BYD1_k127_2017452_14 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 294.0
BYD1_k127_2017452_15 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 298.0
BYD1_k127_2017452_16 acyl-CoA dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002626 264.0
BYD1_k127_2017452_17 mechanosensitive ion channel K22044 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000242 252.0
BYD1_k127_2017452_18 - - - - 0.000000000000000000000000000000000000000000000000000000000524 212.0
BYD1_k127_2017452_19 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000006994 180.0
BYD1_k127_2017452_2 Glycosyltransferase family 28 C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 556.0
BYD1_k127_2017452_20 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000005593 179.0
BYD1_k127_2017452_21 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000529 150.0
BYD1_k127_2017452_22 RDD family - - - 0.00000000000000000000000000000000001072 140.0
BYD1_k127_2017452_23 protein possibly involved in aromatic compounds catabolism - - - 0.000000000000000000009719 103.0
BYD1_k127_2017452_24 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) - - - 0.00000000000000001378 95.0
BYD1_k127_2017452_25 Copper homeostasis K06079 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0010810,GO:0016020,GO:0019867,GO:0030155,GO:0030312,GO:0030313,GO:0031975,GO:0042802,GO:0044462,GO:0044464,GO:0050789,GO:0065007,GO:0071944 - 0.0000682 52.0
BYD1_k127_2017452_3 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002899 483.0
BYD1_k127_2017452_4 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 475.0
BYD1_k127_2017452_5 Acyl-CoA dehydrogenase, middle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000158 438.0
BYD1_k127_2017452_6 N-terminal domain of oxidoreductase K07119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005459 402.0
BYD1_k127_2017452_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 324.0
BYD1_k127_2017452_8 mechanosensitive ion channel K22044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 325.0
BYD1_k127_2017452_9 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00046 - 1.1.1.69 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 319.0
BYD1_k127_2041753_0 Hydantoinase B/oxoprolinase - - - 0.0 1034.0
BYD1_k127_2041753_1 Hydantoinase/oxoprolinase K01469,K01473 - 3.5.2.14,3.5.2.9 1.324e-321 999.0
BYD1_k127_2041753_10 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 348.0
BYD1_k127_2041753_11 of the double-stranded beta helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003042 267.0
BYD1_k127_2041753_12 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.00000000000000000000000000000000000000000000000000000000000001025 222.0
BYD1_k127_2041753_13 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000009509 203.0
BYD1_k127_2041753_14 Polymer-forming cytoskeletal - - - 0.000000000000000000000000000000000000000005974 160.0
BYD1_k127_2041753_15 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000001287 154.0
BYD1_k127_2041753_16 Domain of unknown function (DUF427) - - - 0.0000000000000000000000000000000054 133.0
BYD1_k127_2041753_17 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000002118 134.0
BYD1_k127_2041753_18 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000374 110.0
BYD1_k127_2041753_19 translation initiation factor activity K06996 - - 0.000222 48.0
BYD1_k127_2041753_2 Urease alpha-subunit, N-terminal domain K01428 - 3.5.1.5 4.371e-275 851.0
BYD1_k127_2041753_3 Amidohydrolase family - - - 3.1e-217 706.0
BYD1_k127_2041753_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 571.0
BYD1_k127_2041753_5 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 520.0
BYD1_k127_2041753_6 L-seryl-tRNA selenium transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001758 464.0
BYD1_k127_2041753_7 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007592 441.0
BYD1_k127_2041753_8 Aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 393.0
BYD1_k127_2041753_9 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 394.0
BYD1_k127_206160_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003224 552.0
BYD1_k127_206160_1 Amidohydrolase K01686 - 4.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005165 497.0
BYD1_k127_206160_2 CBS domain - - - 0.00000000000000000000000000000000000000000001322 166.0
BYD1_k127_206160_3 KR domain - - - 0.0000000000000000000000000000000000002355 153.0
BYD1_k127_206160_4 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000001289 94.0
BYD1_k127_2114056_0 Uncharacterised protein family (UPF0261) - - - 1.502e-316 996.0
BYD1_k127_2114056_1 Flotillin - - - 2.309e-209 665.0
BYD1_k127_2114056_2 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 494.0
BYD1_k127_2114056_3 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002219 470.0
BYD1_k127_2114056_4 Phosphoenolpyruvate hydrolase-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 409.0
BYD1_k127_2114056_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 387.0
BYD1_k127_2114056_6 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 363.0
BYD1_k127_2114056_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000002907 239.0
BYD1_k127_2114056_8 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.0000000000000000000000000000000000000000000000000000000000000003232 221.0
BYD1_k127_2114056_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000007778 113.0
BYD1_k127_2212917_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009313 549.0
BYD1_k127_2212917_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 409.0
BYD1_k127_2212917_10 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000003457 246.0
BYD1_k127_2212917_11 PFAM Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000101 218.0
BYD1_k127_2212917_12 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000001001 218.0
BYD1_k127_2212917_13 Belongs to the BolA IbaG family - - - 0.0000000000000000112 94.0
BYD1_k127_2212917_14 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000001413 80.0
BYD1_k127_2212917_15 STAS domain K07122 - - 0.0000001187 63.0
BYD1_k127_2212917_2 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 407.0
BYD1_k127_2212917_3 Permease MlaE K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 397.0
BYD1_k127_2212917_4 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 388.0
BYD1_k127_2212917_5 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 346.0
BYD1_k127_2212917_6 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 334.0
BYD1_k127_2212917_7 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 319.0
BYD1_k127_2212917_8 VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000008831 248.0
BYD1_k127_2212917_9 Type II and III secretion system protein K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000002027 241.0
BYD1_k127_2265547_0 Tripartite tricarboxylate transporter TctA family K07793 - - 2.51e-245 765.0
BYD1_k127_2265547_1 Belongs to the TPP enzyme family K01577 - 4.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 586.0
BYD1_k127_2265547_2 CoA-transferase family III K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 586.0
BYD1_k127_2265547_3 PFAM formyl transferase domain protein K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 447.0
BYD1_k127_2265547_4 Belongs to the TPP enzyme family K01577 - 4.1.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 372.0
BYD1_k127_2265547_5 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 349.0
BYD1_k127_2265547_6 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008475 262.0
BYD1_k127_2265547_7 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000002124 226.0
BYD1_k127_2265547_8 (FHA) domain - - - 0.00000000000000000000000000000000000000000000000000005787 190.0
BYD1_k127_2265547_9 Tripartite tricarboxylate transporter TctB family - - - 0.000000000000000000000000000000000000005149 151.0
BYD1_k127_2312279_0 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 1.68e-239 757.0
BYD1_k127_2312279_1 Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 541.0
BYD1_k127_2312279_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001983 497.0
BYD1_k127_2312279_3 Luciferase-like monooxygenase K14733 - 1.14.13.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 347.0
BYD1_k127_2312279_4 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003921 332.0
BYD1_k127_2312279_5 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 319.0
BYD1_k127_2312279_6 Belongs to the peptidase S11 family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005974 282.0
BYD1_k127_2312279_7 acyl-CoA dehydrogenase K06445 - - 0.0000000000000000000000000000000000000000000000000000000000000003446 225.0
BYD1_k127_2312279_8 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000000000000813 223.0
BYD1_k127_2315892_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 5.995e-285 889.0
BYD1_k127_2315892_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 548.0
BYD1_k127_2315892_2 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 467.0
BYD1_k127_2315892_3 Protein of unknown function (DUF2817) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006413 430.0
BYD1_k127_2315892_4 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 394.0
BYD1_k127_2315892_5 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 348.0
BYD1_k127_2315892_6 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000001317 271.0
BYD1_k127_2315892_7 Adenylate and Guanylate cyclase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000002871 230.0
BYD1_k127_2370029_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.728e-207 653.0
BYD1_k127_2370029_1 enoyl-CoA hydratase K15866 - 5.3.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 311.0
BYD1_k127_2370029_2 Phenylacetic acid degradation protein PaaY K02617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009535 253.0
BYD1_k127_2370029_3 PFAM isochorismatase hydrolase - - - 0.00000000000000000000000003163 108.0
BYD1_k127_2370029_4 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000001454 95.0
BYD1_k127_2370029_5 Histidine kinase - - - 0.00000001528 63.0
BYD1_k127_2391628_0 Patatin phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 462.0
BYD1_k127_2391628_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019 GO:0000003,GO:0000166,GO:0001568,GO:0001676,GO:0001944,GO:0003674,GO:0003824,GO:0004888,GO:0004930,GO:0004953,GO:0004954,GO:0004955,GO:0004957,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006636,GO:0006690,GO:0006692,GO:0006693,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007179,GO:0007186,GO:0007275,GO:0007276,GO:0007292,GO:0007565,GO:0007567,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009653,GO:0009719,GO:0009987,GO:0010033,GO:0016053,GO:0016404,GO:0016491,GO:0016614,GO:0016616,GO:0019372,GO:0019752,GO:0019953,GO:0022414,GO:0023052,GO:0030728,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0033559,GO:0035239,GO:0035295,GO:0036094,GO:0038023,GO:0042221,GO:0042759,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0045786,GO:0046394,GO:0046456,GO:0046983,GO:0048037,GO:0048514,GO:0048519,GO:0048523,GO:0048609,GO:0048731,GO:0048844,GO:0048856,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051287,GO:0051704,GO:0051716,GO:0051726,GO:0055114,GO:0060089,GO:0060840,GO:0065007,GO:0070013,GO:0070403,GO:0070493,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071559,GO:0071560,GO:0071704,GO:0072330,GO:0072358,GO:0072359,GO:0097070,GO:0097159,GO:1901265,GO:1901363,GO:1901568,GO:1901570,GO:1901576,GO:2001300,GO:2001301 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000005826 257.0
BYD1_k127_2391628_2 PFAM MaoC domain protein dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000329 234.0
BYD1_k127_2391628_3 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000002566 216.0
BYD1_k127_23947_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1120.0
BYD1_k127_23947_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 290.0
BYD1_k127_2432450_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 1.768e-265 842.0
BYD1_k127_2432450_1 Aldehyde dehydrogenase family K02618,K15514 - 1.2.1.77,1.2.1.91,3.3.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 572.0
BYD1_k127_2432450_10 - - - - 0.000000000000000000000000005082 113.0
BYD1_k127_2432450_11 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000002033 72.0
BYD1_k127_2432450_2 COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 424.0
BYD1_k127_2432450_3 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002755 365.0
BYD1_k127_2432450_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006455 340.0
BYD1_k127_2432450_5 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 325.0
BYD1_k127_2432450_6 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001821 290.0
BYD1_k127_2432450_7 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000001353 216.0
BYD1_k127_2432450_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000007699 191.0
BYD1_k127_2432450_9 Glycine-zipper domain - - - 0.00000000000000000000000000000000000000004954 158.0
BYD1_k127_2434547_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 394.0
BYD1_k127_2434547_1 ABC transporter K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 290.0
BYD1_k127_2434547_2 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000000001684 239.0
BYD1_k127_2434547_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000001666 234.0
BYD1_k127_2434547_4 RNA methyltransferase, RsmD family - - - 0.000000000000000000000000000000000000000000000000002169 190.0
BYD1_k127_2434547_5 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000001544 179.0
BYD1_k127_2453587_0 FAD dependent oxidoreductase central domain - - - 1.398e-312 979.0
BYD1_k127_2453587_1 type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 604.0
BYD1_k127_2453587_2 TIGRFAM 2-aminoethylphosphonate ABC transport system, 1-aminoethylphosphonate-binding protein component K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 415.0
BYD1_k127_2453587_3 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 373.0
BYD1_k127_2453587_4 Rieske 2Fe-2S domain protein K00479 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 330.0
BYD1_k127_2453587_5 Phosphonate utilization associated transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000001455 225.0
BYD1_k127_2453587_6 Alcohol dehydrogenase GroES-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000001363 229.0
BYD1_k127_2482419_0 response regulator K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001537 407.0
BYD1_k127_2482419_1 His Kinase A (phospho-acceptor) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008629 357.0
BYD1_k127_2482419_2 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000002601 261.0
BYD1_k127_2482419_3 Protein conserved in bacteria - - - 0.000000000000000000000000000000001598 145.0
BYD1_k127_2482419_4 AAA domain K08252,K16692 - 2.7.10.1 0.00000000000000000000002668 106.0
BYD1_k127_2482419_5 Serine acetyltransferase K00640 - 2.3.1.30 0.0000000000002398 83.0
BYD1_k127_2487667_0 belongs to the aldehyde dehydrogenase family K00128,K22187 - 1.2.1.3 3.614e-224 706.0
BYD1_k127_2487667_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 416.0
BYD1_k127_2487667_2 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009847 411.0
BYD1_k127_2487667_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 366.0
BYD1_k127_2487667_4 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 362.0
BYD1_k127_2487667_5 Belongs to the GcvT family K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 373.0
BYD1_k127_2487667_6 synthase K01719 - 4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000001673 267.0
BYD1_k127_2487667_7 - - - - 0.0000000000000000000000000000000000000004298 159.0
BYD1_k127_2512550_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 4.681e-204 650.0
BYD1_k127_2512550_1 Domain of unknown function (DUF4105) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 533.0
BYD1_k127_2512550_10 phosphocarrier, HPr family K11189 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000008519 126.0
BYD1_k127_2512550_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000005237 126.0
BYD1_k127_2512550_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 439.0
BYD1_k127_2512550_3 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 389.0
BYD1_k127_2512550_4 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006902 291.0
BYD1_k127_2512550_5 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002656 288.0
BYD1_k127_2512550_6 PFAM Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001228 274.0
BYD1_k127_2512550_7 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000001534 183.0
BYD1_k127_2512550_8 Protein of unknown function (DUF3015) - - - 0.00000000000000000000000000000000000000000000000002533 183.0
BYD1_k127_2512550_9 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.000000000000000000000000000000000003986 141.0
BYD1_k127_2530969_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000907 550.0
BYD1_k127_2530969_1 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006825 394.0
BYD1_k127_2530969_2 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 338.0
BYD1_k127_2530969_3 Haloacid dehalogenase-like hydrolase K07025 - - 0.000000000000000000000000000000000000000000001909 171.0
BYD1_k127_2545681_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1380.0
BYD1_k127_2545681_1 AMP-dependent synthetase - - - 1.789e-302 954.0
BYD1_k127_2545681_10 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 473.0
BYD1_k127_2545681_11 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005117 321.0
BYD1_k127_2545681_12 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 317.0
BYD1_k127_2545681_13 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001367 256.0
BYD1_k127_2545681_14 Protein of unknown function (DUF2889) - - - 0.00000000000000000000000000000000000000000000000000000000000000001648 228.0
BYD1_k127_2545681_15 Asp Glu hydantoin racemase - - - 0.00000000000000000000000000000000000000000000000000000001949 204.0
BYD1_k127_2545681_16 membrane transporter protein K07090 - - 0.000000000000000000000000000000000001257 148.0
BYD1_k127_2545681_17 Cupin domain - - - 0.000000000000000000000000000000000443 138.0
BYD1_k127_2545681_18 Universal stress protein family - - - 0.000000000000000000000000000000001619 133.0
BYD1_k127_2545681_2 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00122 - 1.17.1.9 2.429e-239 751.0
BYD1_k127_2545681_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 4.223e-203 643.0
BYD1_k127_2545681_4 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 4.229e-195 612.0
BYD1_k127_2545681_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 595.0
BYD1_k127_2545681_6 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 584.0
BYD1_k127_2545681_7 sulfate assimilation K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 518.0
BYD1_k127_2545681_8 Isocitrate/isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005076 492.0
BYD1_k127_2545681_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 500.0
BYD1_k127_2567359_0 surface antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 371.0
BYD1_k127_2567359_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 325.0
BYD1_k127_2587970_0 PFAM extracellular solute-binding protein, family 5 K02035 - - 4.262e-201 638.0
BYD1_k127_2587970_1 Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 517.0
BYD1_k127_2587970_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 362.0
BYD1_k127_2587970_4 domain protein - - - 0.000000003474 68.0
BYD1_k127_2688497_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1200.0
BYD1_k127_2688497_1 ribonuclease, Rne Rng family K08301 - - 1.451e-222 698.0
BYD1_k127_2688497_10 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000008973 152.0
BYD1_k127_2688497_11 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000002846 152.0
BYD1_k127_2688497_12 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.0000000000000000000000000000000000009432 144.0
BYD1_k127_2688497_13 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000337 101.0
BYD1_k127_2688497_2 DNA helicase K03657 - 3.6.4.12 1.55e-203 640.0
BYD1_k127_2688497_3 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007214 548.0
BYD1_k127_2688497_4 Flavin containing amine oxidoreductase K02293 - 1.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003266 516.0
BYD1_k127_2688497_5 Beta-lactamase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 423.0
BYD1_k127_2688497_6 Belongs to the amidase family K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 406.0
BYD1_k127_2688497_7 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007687 281.0
BYD1_k127_2688497_8 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006368 263.0
BYD1_k127_2688497_9 Maf-like protein K06287 - - 0.00000000000000000000000000000000000000000000000000000000008018 214.0
BYD1_k127_2699754_0 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 407.0
BYD1_k127_2699754_1 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 361.0
BYD1_k127_2699754_2 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000009667 176.0
BYD1_k127_2699754_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000004132 136.0
BYD1_k127_2702816_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009625 546.0
BYD1_k127_2702816_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 409.0
BYD1_k127_2702816_2 Histidine kinase K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003012 312.0
BYD1_k127_2702816_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000001479 207.0
BYD1_k127_2702816_4 PFAM response regulator receiver K11443 - - 0.0000000000000000000000000000000001175 137.0
BYD1_k127_2704838_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1247.0
BYD1_k127_2704838_1 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 4.572e-254 793.0
BYD1_k127_2704838_10 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000001013 125.0
BYD1_k127_2704838_11 Forkhead associated domain - - - 0.000000000000000000000000001557 122.0
BYD1_k127_2704838_12 - - - - 0.00000001313 57.0
BYD1_k127_2704838_13 - K09004 - - 0.0001938 48.0
BYD1_k127_2704838_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 532.0
BYD1_k127_2704838_3 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 388.0
BYD1_k127_2704838_4 extracellular solute-binding protein, family 1 K02020,K22003 - 5.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 326.0
BYD1_k127_2704838_5 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 305.0
BYD1_k127_2704838_6 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001202 286.0
BYD1_k127_2704838_7 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000003917 234.0
BYD1_k127_2704838_8 CoA binding domain K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000005383 235.0
BYD1_k127_2704838_9 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000006395 222.0
BYD1_k127_2731352_0 Required for chromosome condensation and partitioning K03529 - - 1.5e-323 1027.0
BYD1_k127_2731352_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 1.571e-290 927.0
BYD1_k127_2731352_10 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 397.0
BYD1_k127_2731352_11 Polyphosphate kinase 2 (PPK2) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 399.0
BYD1_k127_2731352_12 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 355.0
BYD1_k127_2731352_13 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003733 379.0
BYD1_k127_2731352_14 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 346.0
BYD1_k127_2731352_15 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 314.0
BYD1_k127_2731352_16 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001713 267.0
BYD1_k127_2731352_17 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001387 257.0
BYD1_k127_2731352_18 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000001571 256.0
BYD1_k127_2731352_19 phosphoribosyltransferase K00760 - 2.4.2.8 0.00000000000000000000000000000000000000000000000000000000000002124 219.0
BYD1_k127_2731352_2 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 4.425e-247 779.0
BYD1_k127_2731352_20 Belongs to the protein N5-glutamine methyltransferase family K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000001602 229.0
BYD1_k127_2731352_21 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016651,GO:0016657,GO:0018130,GO:0019438,GO:0033739,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000009573 203.0
BYD1_k127_2731352_22 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000006126 179.0
BYD1_k127_2731352_23 Putative peptidoglycan binding domain - - - 0.00000000000000000009281 95.0
BYD1_k127_2731352_3 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003571 529.0
BYD1_k127_2731352_4 PFAM aminotransferase class I and II K14267 - 2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 475.0
BYD1_k127_2731352_5 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 464.0
BYD1_k127_2731352_6 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004304 461.0
BYD1_k127_2731352_7 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000047 430.0
BYD1_k127_2731352_8 Psort location Cytoplasmic, score 8.96 K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 405.0
BYD1_k127_2731352_9 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 402.0
BYD1_k127_278336_0 PAS fold - - - 1.041e-202 649.0
BYD1_k127_278336_1 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 351.0
BYD1_k127_278336_10 Voltage-dependent anion channel K03304 - - 0.00000000000000000000000000000001038 139.0
BYD1_k127_278336_11 PFAM response regulator receiver - - - 0.00000000000000000000000004994 111.0
BYD1_k127_278336_12 membrane - - - 0.000003644 54.0
BYD1_k127_278336_13 esterase of the alpha-beta hydrolase superfamily - - - 0.00003653 54.0
BYD1_k127_278336_2 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 306.0
BYD1_k127_278336_3 PFAM intradiol ring-cleavage dioxygenase K04098 - 1.13.11.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007002 293.0
BYD1_k127_278336_4 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001476 291.0
BYD1_k127_278336_5 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001974 245.0
BYD1_k127_278336_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000002539 179.0
BYD1_k127_278336_7 COG0411 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.000000000000000000000000000000000000003286 154.0
BYD1_k127_278336_8 META domain K03929 - - 0.000000000000000000000000000000000000004753 155.0
BYD1_k127_278336_9 Cupin domain - - - 0.00000000000000000000000000000000001229 143.0
BYD1_k127_2789287_0 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 452.0
BYD1_k127_2789287_1 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 361.0
BYD1_k127_2789287_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000582 314.0
BYD1_k127_2789287_3 Long-chain acyl-CoA synthetases (AMP-forming) K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 292.0
BYD1_k127_2789287_4 Outer membrane protein beta-barrel domain - - - 0.00000000000000009043 86.0
BYD1_k127_2820591_0 Phospholipase D Active site motif K01115 - 3.1.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000803 439.0
BYD1_k127_2820591_1 Catechol dioxygenase N terminus K03381 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006725,GO:0008150,GO:0008152,GO:0008199,GO:0009056,GO:0009712,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0018576,GO:0018958,GO:0019114,GO:0019336,GO:0019439,GO:0019614,GO:0019615,GO:0042952,GO:0043167,GO:0043169,GO:0044237,GO:0044248,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 356.0
BYD1_k127_2820591_2 endonuclease exonuclease phosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002242 270.0
BYD1_k127_2820591_3 Protein of unknown function (DUF3300) - - - 0.000000000000000000000000000000000000000000008512 173.0
BYD1_k127_2820591_4 NMT1-like family - - - 0.00000000000000000000000000000000000003272 155.0
BYD1_k127_2820591_5 EF-hand domain pair - - - 0.00004968 51.0
BYD1_k127_2831802_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 5.442e-196 623.0
BYD1_k127_2831802_1 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000398 491.0
BYD1_k127_2831802_2 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007266 477.0
BYD1_k127_2831802_3 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 428.0
BYD1_k127_2831802_4 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001552 387.0
BYD1_k127_2831802_5 Family of unknown function (DUF1028) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001176 277.0
BYD1_k127_2831802_6 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.00000000000000000000000000000000000000000000000000000000003862 214.0
BYD1_k127_2831802_7 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000008184 113.0
BYD1_k127_2831802_8 Universal stress protein family - - - 0.00000000000000003919 88.0
BYD1_k127_2831802_9 Universal stress protein family - - - 0.0000000000000417 83.0
BYD1_k127_2838379_0 Transposase IS200 like K07491 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009412 263.0
BYD1_k127_2838379_1 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000001483 199.0
BYD1_k127_2838379_2 ABC transporter transmembrane region K02021 - - 0.0000000000000000000000000000000000000000000000001086 182.0
BYD1_k127_2838379_3 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000602 152.0
BYD1_k127_2856641_0 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 2.046e-226 718.0
BYD1_k127_2856641_1 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 4.074e-195 620.0
BYD1_k127_2856641_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 470.0
BYD1_k127_2856641_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001187 270.0
BYD1_k127_2856641_4 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000009023 210.0
BYD1_k127_2856641_5 Protein of unknown function (DUF1643) - - - 0.0000000000000000000000000000000000000000000000000000005539 199.0
BYD1_k127_2856641_6 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate - - - 0.00000000000000000000000000000000000000000000000000008563 196.0
BYD1_k127_2856641_7 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0000000000000000000000000000000000000000003066 162.0
BYD1_k127_2856641_8 endonuclease - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000004574 133.0
BYD1_k127_2856641_9 Uncharacterized protein conserved in bacteria (DUF2171) - - - 0.000000000000000000005627 96.0
BYD1_k127_2883431_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.475e-229 717.0
BYD1_k127_2883431_1 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 508.0
BYD1_k127_2883431_10 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000001487 134.0
BYD1_k127_2883431_11 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.0000000000000000000000877 110.0
BYD1_k127_2883431_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 502.0
BYD1_k127_2883431_3 SMART Tetratricopeptide domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 475.0
BYD1_k127_2883431_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006453 382.0
BYD1_k127_2883431_5 Fatty acid desaturase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 346.0
BYD1_k127_2883431_6 GHMP kinases N terminal domain K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002254 295.0
BYD1_k127_2883431_7 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002391 248.0
BYD1_k127_2883431_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000009134 224.0
BYD1_k127_2883431_9 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000005133 157.0
BYD1_k127_2911004_0 KduI/IolB family K03337 - 5.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008851 417.0
BYD1_k127_2911004_1 acid transport K09972 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006331 387.0
BYD1_k127_2911004_2 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009728 363.0
BYD1_k127_2911004_3 Cytochrome P460 - - - 0.000000000000000000000000000000000000000000000000000000007713 206.0
BYD1_k127_2911004_4 Histidine phosphatase superfamily (branch 1) - - - 0.000000000000000000000000000000000000000000000004324 179.0
BYD1_k127_2911004_5 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000009154 132.0
BYD1_k127_2921828_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 2.205e-291 912.0
BYD1_k127_2921828_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 421.0
BYD1_k127_2921828_2 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009818 366.0
BYD1_k127_2921828_3 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003879 354.0
BYD1_k127_2921828_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 352.0
BYD1_k127_2921828_5 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002382 283.0
BYD1_k127_2921828_6 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000002712 233.0
BYD1_k127_2921828_7 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000002144 191.0
BYD1_k127_2921828_8 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000000000221 175.0
BYD1_k127_2945260_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 6.51e-273 852.0
BYD1_k127_2945260_1 Belongs to the peptidase M16 family K07263 - - 1.439e-272 866.0
BYD1_k127_2945260_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000131 225.0
BYD1_k127_2945260_11 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000495 211.0
BYD1_k127_2945260_12 Belongs to the ompA family - - - 0.000000000000000000000000000000000000000000000000001534 196.0
BYD1_k127_2945260_13 Branched-chain amino acid permease - - - 0.0000000000000000000000000000000000000000000003175 177.0
BYD1_k127_2945260_14 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000006119 167.0
BYD1_k127_2945260_15 Mycobacterial 4 TMS phage holin, superfamily IV K08972 - - 0.0000000000000000000000000000000003802 138.0
BYD1_k127_2945260_16 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000001137 128.0
BYD1_k127_2945260_17 Acetyltransferase (GNAT) domain K03828 - - 0.000000000000000000000000000007149 127.0
BYD1_k127_2945260_18 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000004025 69.0
BYD1_k127_2945260_19 Branched-chain amino acid transport protein (AzlD) - - - 0.00000001949 63.0
BYD1_k127_2945260_2 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 533.0
BYD1_k127_2945260_20 hyperosmotic response - - - 0.000008375 58.0
BYD1_k127_2945260_21 Domain of unknown function (DUF4398) - - - 0.0001095 50.0
BYD1_k127_2945260_3 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008832 499.0
BYD1_k127_2945260_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004332 435.0
BYD1_k127_2945260_5 Uncharacterized conserved protein (DUF2183) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003825 326.0
BYD1_k127_2945260_6 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002809 271.0
BYD1_k127_2945260_7 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006553 251.0
BYD1_k127_2945260_8 Redoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000002836 246.0
BYD1_k127_2945260_9 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001986 254.0
BYD1_k127_2957208_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 8.897e-250 790.0
BYD1_k127_2957208_1 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 340.0
BYD1_k127_2957208_2 - - - - 0.0000000000000001102 83.0
BYD1_k127_3016148_0 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 535.0
BYD1_k127_3016148_1 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 508.0
BYD1_k127_3016148_2 Histidine kinase K07641 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 312.0
BYD1_k127_3016148_3 hydrolases of the HAD superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 315.0
BYD1_k127_3016148_4 Protein conserved in bacteria - - - 0.0000000004914 62.0
BYD1_k127_3016148_5 SMART Transport-associated and nodulation region - - - 0.00000005482 61.0
BYD1_k127_3061795_0 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 5.473e-208 653.0
BYD1_k127_3061795_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 335.0
BYD1_k127_3061795_2 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 304.0
BYD1_k127_3061795_3 PFAM alpha beta hydrolase fold K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000005641 266.0
BYD1_k127_3061795_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002355 244.0
BYD1_k127_3061795_5 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000003869 226.0
BYD1_k127_3061795_6 - - - - 0.000000000000000000000000000000000000000001056 164.0
BYD1_k127_3061795_7 Protein of unknown function (DUF1161) - - - 0.0000000000000003571 81.0
BYD1_k127_3061795_8 MmgE PrpD family protein - - - 0.0002845 44.0
BYD1_k127_306609_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 500.0
BYD1_k127_306609_1 Maltose acetyltransferase K00661 - 2.3.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000914 304.0
BYD1_k127_306609_2 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.0000000000000000000000000000000000000000000000000000000000006522 218.0
BYD1_k127_306609_3 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000001081 197.0
BYD1_k127_306609_4 - - - - 0.0000000000000000000000000000000000000000000000000212 185.0
BYD1_k127_306609_5 - - - - 0.000000000000000000000000000000000000000000323 166.0
BYD1_k127_313154_0 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 530.0
BYD1_k127_313154_1 phosphatidate phosphatase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 452.0
BYD1_k127_313154_2 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005394 293.0
BYD1_k127_313154_3 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000004365 214.0
BYD1_k127_313154_4 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000001077 202.0
BYD1_k127_313154_5 (Lipo)protein - - - 0.00000000000003624 79.0
BYD1_k127_313154_6 diguanylate cyclase - - - 0.0007284 46.0
BYD1_k127_3161636_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 3.477e-243 791.0
BYD1_k127_3161636_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 380.0
BYD1_k127_3161636_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 317.0
BYD1_k127_3161636_3 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001386 235.0
BYD1_k127_3161636_4 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000000000000000000000002172 132.0
BYD1_k127_3161636_5 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000001745 125.0
BYD1_k127_3161636_6 methyltransferase - - - 0.0000000000000000000000002507 110.0
BYD1_k127_3185158_0 Protein of unknown function (DUF445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005233 337.0
BYD1_k127_3185158_1 - - - - 0.0000000000000000000000000000000000000000000000000000007735 202.0
BYD1_k127_3185158_2 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.00000000000000000000000000000000000254 151.0
BYD1_k127_3185158_3 UPF0391 membrane protein - - - 0.00000000001345 66.0
BYD1_k127_3194951_0 AMP-binding enzyme C-terminal domain K02182,K20034 GO:0003674,GO:0003824,GO:0003996,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0016405,GO:0016874,GO:0016877,GO:0016878,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044424,GO:0044464,GO:0071704 6.2.1.44,6.2.1.48 4.437e-200 630.0
BYD1_k127_3194951_1 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003725 403.0
BYD1_k127_3194951_2 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.000000000000000000000000000000000000000000000000000000000000000001716 235.0
BYD1_k127_3194951_3 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000003274 176.0
BYD1_k127_3199585_0 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 460.0
BYD1_k127_3199585_1 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000003587 149.0
BYD1_k127_3199585_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate - - - 0.00000000000000000000000000000003265 138.0
BYD1_k127_3199585_3 Nucleoside diphosphate kinase K06140 - - 0.0000000000000005916 83.0
BYD1_k127_3231642_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004591 548.0
BYD1_k127_3231642_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 432.0
BYD1_k127_3231642_10 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000006077 177.0
BYD1_k127_3231642_11 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 - 2.1.1.63 0.0000000000000000000000000000000000000002402 155.0
BYD1_k127_3231642_12 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.000000000000000000000000000000694 122.0
BYD1_k127_3231642_13 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000004446 122.0
BYD1_k127_3231642_2 Tyrosine recombinase xerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 359.0
BYD1_k127_3231642_3 Belongs to the LDH2 MDH2 oxidoreductase family K13609,K16844 - 1.1.1.338,1.5.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 357.0
BYD1_k127_3231642_4 dienelactone hydrolase K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000005587 263.0
BYD1_k127_3231642_5 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001428 250.0
BYD1_k127_3231642_6 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000004968 225.0
BYD1_k127_3231642_7 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000007236 216.0
BYD1_k127_3231642_8 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000001496 208.0
BYD1_k127_3231642_9 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily - - - 0.00000000000000000000000000000000000000000000000000000004205 207.0
BYD1_k127_325249_0 BT1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 585.0
BYD1_k127_325249_1 deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 444.0
BYD1_k127_325249_2 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 368.0
BYD1_k127_325249_3 ABC transporter substrate-binding protein K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003359 274.0
BYD1_k127_325249_4 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001024 267.0
BYD1_k127_325249_5 beta-keto acid cleavage enzyme K18013 - 2.3.1.247 0.00000000000000000000000000000000000000000000000000000000000000000000000261 246.0
BYD1_k127_325249_6 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001345 253.0
BYD1_k127_325249_7 Ketosteroid isomerase-related protein - - - 0.00000000000000000000000000000000000000000000000000000000004855 207.0
BYD1_k127_325249_8 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.000000000000000000000000000000000000001366 160.0
BYD1_k127_325249_9 Protein of unknown function (DUF1272) K09984 - - 0.000000000000000000000000000000001844 133.0
BYD1_k127_3275129_0 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008154 551.0
BYD1_k127_3275129_1 Patatin phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009187 456.0
BYD1_k127_3275129_10 - - - - 0.00000000000001225 81.0
BYD1_k127_3275129_11 Transmembrane anti-sigma factor - - - 0.0000000007819 62.0
BYD1_k127_3275129_12 Bacterial protein of unknown function (DUF883) - GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0043021,GO:0043024,GO:0044464,GO:0044877,GO:0060187,GO:0071944 - 0.000000009773 62.0
BYD1_k127_3275129_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 439.0
BYD1_k127_3275129_3 Enoyl-(Acyl carrier protein) reductase K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 375.0
BYD1_k127_3275129_4 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001558 258.0
BYD1_k127_3275129_5 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000000000000000000000001055 218.0
BYD1_k127_3275129_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000589 195.0
BYD1_k127_3275129_7 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000004313 181.0
BYD1_k127_3275129_8 Cupin domain - - - 0.00000000000000000000000000000000000000000002678 171.0
BYD1_k127_3275129_9 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000000000000007666 115.0
BYD1_k127_3280848_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 2.372e-281 889.0
BYD1_k127_3280848_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005163 498.0
BYD1_k127_3280848_2 protein conserved in bacteria K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 469.0
BYD1_k127_3280848_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.000000000000000000000000000000000000000000000000000001895 192.0
BYD1_k127_3280848_4 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000000001034 188.0
BYD1_k127_3280848_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000006241 175.0
BYD1_k127_3280848_6 dehydrogenase - - - 0.000001696 50.0
BYD1_k127_3280848_7 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.00001349 47.0
BYD1_k127_3320199_0 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000008299 155.0
BYD1_k127_3320199_1 helix_turn_helix, Lux Regulon - - - 0.000000000002279 72.0
BYD1_k127_3320199_2 helix_turn_helix, Lux Regulon - - - 0.000000000008085 73.0
BYD1_k127_3320199_3 Transcriptional regulator K10914 - - 0.00000000001447 75.0
BYD1_k127_3324899_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 1.765e-207 651.0
BYD1_k127_3324899_1 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 571.0
BYD1_k127_3324899_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002952 484.0
BYD1_k127_3377859_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 505.0
BYD1_k127_3377859_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008461 423.0
BYD1_k127_3506953_0 Amino acid adenylation enzyme thioester reductase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 526.0
BYD1_k127_3506953_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004219 495.0
BYD1_k127_3506953_2 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006218 398.0
BYD1_k127_3506953_3 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 310.0
BYD1_k127_3506953_4 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007922 297.0
BYD1_k127_3506953_5 Thioesterase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003596 259.0
BYD1_k127_3506953_6 Male sterility protein K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000005372 230.0
BYD1_k127_3506953_7 Belongs to the P-Pant transferase superfamily K06133 - - 0.0000000000000000000000000000000000003124 155.0
BYD1_k127_3509624_0 TIGRFAM ATP-dependent helicase HrpA K03578 - 3.6.4.13 0.0 1256.0
BYD1_k127_3509624_1 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.0 1147.0
BYD1_k127_3509624_10 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 426.0
BYD1_k127_3509624_11 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007952 420.0
BYD1_k127_3509624_12 Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family K07402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 414.0
BYD1_k127_3509624_13 Oxidoreductase family, C-terminal alpha/beta domain K00010 - 1.1.1.18,1.1.1.369 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 419.0
BYD1_k127_3509624_14 Glutaredoxin-family domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002879 398.0
BYD1_k127_3509624_15 Xylose isomerase K03335 - 4.2.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005592 392.0
BYD1_k127_3509624_16 histidine kinase HAMP region domain protein K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007579 351.0
BYD1_k127_3509624_17 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009666 327.0
BYD1_k127_3509624_18 Oxidoreductase family, C-terminal alpha beta domain K00010 - 1.1.1.18,1.1.1.369 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 323.0
BYD1_k127_3509624_19 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003575 289.0
BYD1_k127_3509624_2 ABC-type Fe3 transport system permease component K02011 - - 2.878e-294 918.0
BYD1_k127_3509624_20 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008288 277.0
BYD1_k127_3509624_21 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001503 284.0
BYD1_k127_3509624_22 PFAM Inositol monophosphatase family K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002312 278.0
BYD1_k127_3509624_23 Belongs to the ABC transporter superfamily K11072 - 3.6.3.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005127 283.0
BYD1_k127_3509624_24 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000001169 268.0
BYD1_k127_3509624_25 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007673 265.0
BYD1_k127_3509624_26 Arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000009811 245.0
BYD1_k127_3509624_27 carbon monoxide dehydrogenase K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000001045 233.0
BYD1_k127_3509624_28 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000003657 246.0
BYD1_k127_3509624_29 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000001794 213.0
BYD1_k127_3509624_3 Belongs to the TPP enzyme family K03336 - 3.7.1.22 9.291e-277 861.0
BYD1_k127_3509624_30 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000002464 210.0
BYD1_k127_3509624_31 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000008604 203.0
BYD1_k127_3509624_32 Lumazine binding domain K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000003468 208.0
BYD1_k127_3509624_33 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000002307 184.0
BYD1_k127_3509624_34 Phasin protein - - - 0.000000000000000000000000000000000000000000000002136 178.0
BYD1_k127_3509624_35 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.0000000000000000000000000000000000000000001343 168.0
BYD1_k127_3509624_36 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000008509 160.0
BYD1_k127_3509624_37 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 - 2.7.7.76 0.0000000000000000000000000000000000000003698 167.0
BYD1_k127_3509624_38 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000002021 153.0
BYD1_k127_3509624_39 Ribosomal L28 family K02902 - - 0.00000000000000000000000000001143 120.0
BYD1_k127_3509624_4 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 4.319e-203 642.0
BYD1_k127_3509624_40 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000000461 94.0
BYD1_k127_3509624_41 - - - - 0.0000000000005491 74.0
BYD1_k127_3509624_42 Protein of unknown function (DUF3108) - - - 0.00000000001591 74.0
BYD1_k127_3509624_43 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.0000000001587 63.0
BYD1_k127_3509624_44 SPW repeat - - - 0.000008405 57.0
BYD1_k127_3509624_45 Protein of unknown function (DUF2799) - - - 0.0000405 53.0
BYD1_k127_3509624_46 Protein of unknown function (DUF2799) - - - 0.0001541 48.0
BYD1_k127_3509624_5 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 2.577e-195 616.0
BYD1_k127_3509624_6 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003967 542.0
BYD1_k127_3509624_7 Bacterial extracellular solute-binding protein K02012,K11081 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 508.0
BYD1_k127_3509624_8 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 482.0
BYD1_k127_3509624_9 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 440.0
BYD1_k127_3597647_0 Putative metal-binding domain of cation transport ATPase K01533 - 3.6.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 600.0
BYD1_k127_3597647_1 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 429.0
BYD1_k127_3597647_2 Protein involved in response to NO K07234 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009044 344.0
BYD1_k127_3597647_3 CoA-binding domain protein K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000149 254.0
BYD1_k127_3597647_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000003889 206.0
BYD1_k127_3597647_5 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000001032 72.0
BYD1_k127_3605402_0 FAD binding domain - - - 5.269e-225 706.0
BYD1_k127_3605402_1 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 605.0
BYD1_k127_3605402_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000009852 233.0
BYD1_k127_3605402_11 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000001592 154.0
BYD1_k127_3605402_12 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000006128 151.0
BYD1_k127_3605402_13 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000008726 144.0
BYD1_k127_3605402_2 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 430.0
BYD1_k127_3605402_3 alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 427.0
BYD1_k127_3605402_4 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 405.0
BYD1_k127_3605402_5 Serine aminopeptidase, S33 K01253,K08253 - 2.7.10.2,3.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 380.0
BYD1_k127_3605402_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 320.0
BYD1_k127_3605402_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000033 281.0
BYD1_k127_3605402_8 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004852 278.0
BYD1_k127_3605402_9 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000003882 233.0
BYD1_k127_3699429_0 Aldehyde dehydrogenase K00128,K00130 - 1.2.1.3,1.2.1.8 2.32e-206 651.0
BYD1_k127_3699429_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00001,K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 377.0
BYD1_k127_3699429_2 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008429 328.0
BYD1_k127_3727520_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0 1109.0
BYD1_k127_3727520_1 Glutaminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 591.0
BYD1_k127_3727520_2 PFAM EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000002385 205.0
BYD1_k127_3727520_3 PFAM Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000004937 135.0
BYD1_k127_3727520_4 'Cold-shock' DNA-binding domain K03704 - - 0.000000000000000000000000000006487 119.0
BYD1_k127_3731266_0 Belongs to the transketolase family K00615 - 2.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001555 461.0
BYD1_k127_3731266_1 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 423.0
BYD1_k127_3731266_2 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001722 279.0
BYD1_k127_3731266_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.00000000000000000000000368 102.0
BYD1_k127_3731266_4 Ankyrin repeat - - - 0.00004446 54.0
BYD1_k127_3780343_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1182.0
BYD1_k127_3780343_1 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 2.066e-252 799.0
BYD1_k127_3780343_2 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009764 282.0
BYD1_k127_3780343_3 FKBP-type peptidyl-prolyl cis-trans isomerase K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000003553 183.0
BYD1_k127_3780343_4 NUDIX domain - - - 0.0000000000000000000000000000000000000000000005419 169.0
BYD1_k127_3780343_5 COG0501 Zn-dependent protease with chaperone function - - - 0.00000000000000000000000000000000000000004613 156.0
BYD1_k127_3780343_6 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000008571 137.0
BYD1_k127_385180_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1371.0
BYD1_k127_385180_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 599.0
BYD1_k127_385180_10 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000002033 169.0
BYD1_k127_385180_11 - - - - 0.00000000000000000000000000000000006035 144.0
BYD1_k127_385180_12 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000002789 138.0
BYD1_k127_385180_13 Type II secretory pathway, pseudopilin - - - 0.000000000000000000000000000000001666 140.0
BYD1_k127_385180_14 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000008923 121.0
BYD1_k127_385180_15 - - - - 0.000000000000000002612 91.0
BYD1_k127_385180_16 Right handed beta helix region - - - 0.00000000000000003657 90.0
BYD1_k127_385180_17 phosphoprotein phosphatase activity - - - 0.0000000000000003162 91.0
BYD1_k127_385180_18 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.0000000000000008632 90.0
BYD1_k127_385180_19 carbon utilization - - - 0.0000000000008553 80.0
BYD1_k127_385180_2 Secretin and TonB N terminus short domain K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003628 599.0
BYD1_k127_385180_20 - - - - 0.0000000002551 67.0
BYD1_k127_385180_3 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008541 444.0
BYD1_k127_385180_4 ATP-grasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003755 392.0
BYD1_k127_385180_5 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 361.0
BYD1_k127_385180_6 Right handed beta helix region - - - 0.00000000000000000000000000000000000000000000000000000000007243 222.0
BYD1_k127_385180_7 WbqC-like protein family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000008299 207.0
BYD1_k127_385180_8 prepilin-type N-terminal cleavage methylation K02456 - - 0.00000000000000000000000000000000000000000000000001277 198.0
BYD1_k127_385180_9 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000009584 174.0
BYD1_k127_3888542_0 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 328.0
BYD1_k127_3888542_1 Two component transcriptional regulator, winged helix family K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 316.0
BYD1_k127_3888542_2 Histidine kinase K07641 - 2.7.13.3 0.00000000000000000001283 106.0
BYD1_k127_3900980_0 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006632 552.0
BYD1_k127_3900980_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000002047 228.0
BYD1_k127_3900980_2 Penicillin amidase K01434 - 3.5.1.11 0.000000000000000000000000000000000000000000000000000000000001473 213.0
BYD1_k127_3960771_0 Pirin C-terminal cupin domain K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 329.0
BYD1_k127_3960771_1 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 312.0
BYD1_k127_3960771_2 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002045 273.0
BYD1_k127_3960771_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005402 271.0
BYD1_k127_3960771_4 Phospholipase A1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000008964 244.0
BYD1_k127_3960771_5 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000000000000000001253 170.0
BYD1_k127_3978841_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 400.0
BYD1_k127_3978841_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004816 291.0
BYD1_k127_3978841_2 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000006728 148.0
BYD1_k127_3978841_3 PAS fold - - - 0.0000000000000000000000000000000001212 151.0
BYD1_k127_3978841_4 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000653 94.0
BYD1_k127_3980286_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1079.0
BYD1_k127_3980286_1 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 7.767e-241 763.0
BYD1_k127_3980286_10 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000002883 152.0
BYD1_k127_3980286_11 PFAM Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000004231 146.0
BYD1_k127_3980286_12 Thiol-disulfide isomerase K00384 - 1.8.1.9 0.000000000000000000000000005796 112.0
BYD1_k127_3980286_13 Virulence factor BrkB K07058 - - 0.0000000000000000000000003745 110.0
BYD1_k127_3980286_16 Rhodanese Homology Domain K06917 - - 0.000000003056 60.0
BYD1_k127_3980286_17 Domain of unknown function (DUF4864) - - - 0.0001034 49.0
BYD1_k127_3980286_18 Acetyltransferase (GNAT) domain K03824 - - 0.0005221 45.0
BYD1_k127_3980286_2 Starch synthase catalytic domain K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 445.0
BYD1_k127_3980286_3 PFAM Na dependent nucleoside transporter K03317 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003678 441.0
BYD1_k127_3980286_4 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 424.0
BYD1_k127_3980286_5 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009585 412.0
BYD1_k127_3980286_6 PFAM Serine threonine protein kinase-related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 396.0
BYD1_k127_3980286_7 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 349.0
BYD1_k127_3980286_8 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006742 321.0
BYD1_k127_3980286_9 TspO/MBR family K05770 - - 0.00000000000000000000000000000000000000000000000000000001011 201.0
BYD1_k127_4004596_0 FAD dependent oxidoreductase - - - 1.076e-206 652.0
BYD1_k127_4004596_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K11747 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 540.0
BYD1_k127_4004596_10 Flavin reductase like domain - - - 0.00000000000000000000000000005443 135.0
BYD1_k127_4004596_11 - - - - 0.000000000000000000000000004984 117.0
BYD1_k127_4004596_12 overlaps another CDS with the same product name K07240 - - 0.00000000000000000000000009828 115.0
BYD1_k127_4004596_13 Major facilitator Superfamily - - - 0.0000000000000000000128 106.0
BYD1_k127_4004596_14 - - - - 0.0000000000000006895 81.0
BYD1_k127_4004596_2 Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 489.0
BYD1_k127_4004596_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 416.0
BYD1_k127_4004596_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 397.0
BYD1_k127_4004596_5 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003418 353.0
BYD1_k127_4004596_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 290.0
BYD1_k127_4004596_7 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000001411 242.0
BYD1_k127_4004596_8 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000000004156 201.0
BYD1_k127_4004596_9 - - - - 0.00000000000000000000000000000000000000000000000000001616 197.0
BYD1_k127_4007187_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 1.92e-259 806.0
BYD1_k127_4007187_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 426.0
BYD1_k127_4007187_2 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004302 268.0
BYD1_k127_4007187_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000004067 231.0
BYD1_k127_4007187_4 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000000002213 184.0
BYD1_k127_4007187_5 Sortase family K07284 - 3.4.22.70 0.0000000000000000000000000000000000000000000001227 176.0
BYD1_k127_4020948_0 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 5.594e-206 653.0
BYD1_k127_4020948_1 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 484.0
BYD1_k127_4020948_2 alpha/beta hydrolase fold K07019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 352.0
BYD1_k127_4020948_3 PFAM extracellular solute-binding protein family 1 K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007857 354.0
BYD1_k127_4020948_4 Glutathione peroxidase K00432 - 1.11.1.9 0.00000000000000000000000000000000000000000000000000000000001629 211.0
BYD1_k127_4023307_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002466 561.0
BYD1_k127_4023307_1 Acyl-CoA dehydrogenase, C-terminal domain K06446 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002286 557.0
BYD1_k127_4023307_2 Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily K03430 - 2.6.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 471.0
BYD1_k127_4023307_3 TIGRFAM HAD-superfamily subfamily IB hydrolase, TIGR01490 - - - 0.000000000000000000000000000000000000000000000000000000000000009506 226.0
BYD1_k127_4023307_4 MaoC like domain K18290 - 4.2.1.56 0.00000000000000000000000000000000000000000000000000000000000001121 227.0
BYD1_k127_4023307_5 binding-protein-dependent transport systems inner membrane component K02011 - - 0.000000000000000000000000000000000000000000000000000000003713 201.0
BYD1_k127_4023307_6 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000003438 193.0
BYD1_k127_4023307_7 transcriptional - - - 0.000000000000000000000000000000000001039 151.0
BYD1_k127_4023307_8 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000009872 66.0
BYD1_k127_4024692_0 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 435.0
BYD1_k127_4024692_1 TOBE domain K05816,K10112 - 3.6.3.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004352 432.0
BYD1_k127_4024692_10 Cupin 2, conserved barrel domain protein - - - 0.0000000000004469 69.0
BYD1_k127_4024692_11 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000043 53.0
BYD1_k127_4024692_12 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.0002372 48.0
BYD1_k127_4024692_2 PFAM binding-protein-dependent transport systems inner membrane component K02025,K10118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 391.0
BYD1_k127_4024692_3 PFAM binding-protein-dependent transport systems inner membrane component K02026,K10119 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 371.0
BYD1_k127_4024692_4 Ankyrin repeats (3 copies) K06867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 308.0
BYD1_k127_4024692_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003968 276.0
BYD1_k127_4024692_6 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001488 273.0
BYD1_k127_4024692_7 Aldolase/RraA K02553 - - 0.00000000000000000000000000000000000000000000000000000004338 204.0
BYD1_k127_4024692_8 FCD - - - 0.0000000000000000000000000000000000000000000000000000003749 201.0
BYD1_k127_4024692_9 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000006571 188.0
BYD1_k127_4052546_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 9.562e-267 839.0
BYD1_k127_4052546_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 5.504e-230 727.0
BYD1_k127_4052546_10 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002316 250.0
BYD1_k127_4052546_11 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000004979 241.0
BYD1_k127_4052546_12 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000006313 239.0
BYD1_k127_4052546_13 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000000000000000001082 199.0
BYD1_k127_4052546_14 carboxylic ester hydrolase activity - - - 0.0000000000000000000000000000000000000000000162 170.0
BYD1_k127_4052546_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000003289 164.0
BYD1_k127_4052546_16 Preprotein translocase subunit SecG K03075 - - 0.00000000000000000000000011 113.0
BYD1_k127_4052546_17 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 0.00000000000000002596 81.0
BYD1_k127_4052546_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 1.324e-211 665.0
BYD1_k127_4052546_3 chain 5 L K00341 - 1.6.5.3 5.414e-204 646.0
BYD1_k127_4052546_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 524.0
BYD1_k127_4052546_5 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002645 363.0
BYD1_k127_4052546_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 327.0
BYD1_k127_4052546_7 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 290.0
BYD1_k127_4052546_8 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002661 299.0
BYD1_k127_4052546_9 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000008962 247.0
BYD1_k127_4226463_0 Amidohydrolase family K01465 - 3.5.2.3 2.418e-197 624.0
BYD1_k127_4226463_1 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006607 474.0
BYD1_k127_4226463_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 GO:0000104,GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009055,GO:0009060,GO:0009061,GO:0009987,GO:0015980,GO:0016020,GO:0016491,GO:0016627,GO:0016999,GO:0017144,GO:0019752,GO:0022900,GO:0032991,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0045273,GO:0045274,GO:0045281,GO:0045282,GO:0045333,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072350,GO:0097159,GO:0098796,GO:0098797,GO:0098803,GO:1901265,GO:1901363,GO:1902494,GO:1990204 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007821 437.0
BYD1_k127_4226463_3 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005082 282.0
BYD1_k127_4226463_4 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.0000000000000000000000000000000001774 141.0
BYD1_k127_4226463_5 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.000000000000000000000000000004603 124.0
BYD1_k127_42971_0 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 405.0
BYD1_k127_42971_1 ABC transporter, phosphonate, periplasmic substrate-binding protein K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 349.0
BYD1_k127_42971_2 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006565 291.0
BYD1_k127_42971_3 Binding-protein-dependent transport system inner membrane component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003064 272.0
BYD1_k127_42971_4 Putative DNA-binding domain - - - 0.0000000000000000000000000000000000000000000000000006729 194.0
BYD1_k127_42971_5 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000002029 183.0
BYD1_k127_42971_6 Belongs to the UPF0276 family K09930 - - 0.00000000000000000000000000002589 120.0
BYD1_k127_432796_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 1.807e-207 662.0
BYD1_k127_432796_1 Belongs to the peptidase S1C family K04691,K04772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001845 494.0
BYD1_k127_432796_2 Glutathione S-transferase K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001404 328.0
BYD1_k127_432796_3 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000159 267.0
BYD1_k127_432796_4 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000007388 259.0
BYD1_k127_432796_5 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000000000002286 158.0
BYD1_k127_432796_6 Glutaminase - - - 0.0000000000000004405 79.0
BYD1_k127_4345450_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 4.557e-242 756.0
BYD1_k127_4345450_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 2.352e-220 687.0
BYD1_k127_4345450_10 Belongs to the TrpF family K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000009467 239.0
BYD1_k127_4345450_11 PFAM Colicin V production protein K03558 - - 0.0000000000000000000000001513 117.0
BYD1_k127_4345450_12 PFAM Sporulation domain protein K03749 - - 0.0000000000000002557 84.0
BYD1_k127_4345450_2 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 570.0
BYD1_k127_4345450_3 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 536.0
BYD1_k127_4345450_4 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 480.0
BYD1_k127_4345450_5 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 454.0
BYD1_k127_4345450_6 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 447.0
BYD1_k127_4345450_7 LysM domain K08086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 400.0
BYD1_k127_4345450_8 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001953 368.0
BYD1_k127_4345450_9 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 359.0
BYD1_k127_4360081_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 558.0
BYD1_k127_4360081_1 Lipopolysaccharide export system ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 371.0
BYD1_k127_4360081_2 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.0000000000000000000000000000000000000000000000000001014 188.0
BYD1_k127_4360081_3 haloacid dehalogenase-like hydrolase K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000003701 183.0
BYD1_k127_4360081_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000001018 169.0
BYD1_k127_4360081_5 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000008104 148.0
BYD1_k127_4360081_6 ribosomal subunit interface protein K05808 - - 0.00000000000000000000000000000000001227 137.0
BYD1_k127_4360081_7 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000005279 124.0
BYD1_k127_4423393_0 Serine aminopeptidase, S33 - - - 9.741e-198 626.0
BYD1_k127_4423393_1 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 472.0
BYD1_k127_4423393_2 Domain of unknown function (DUF427) - - - 0.000000000000000000000006912 102.0
BYD1_k127_4488237_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 2.093e-232 728.0
BYD1_k127_4488237_1 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830,K00839 - 2.6.1.112,2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 565.0
BYD1_k127_4488237_10 Polysaccharide deacetylase K01452 - 3.5.1.41 0.000000000000000000000000000000000000000000000000000000000000641 212.0
BYD1_k127_4488237_11 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.000000000000000000000000000000000000000000000000000000001486 209.0
BYD1_k127_4488237_12 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000001331 205.0
BYD1_k127_4488237_13 Protein of unknown function (DUF2877) - - - 0.0000000000000000000000000000000003642 141.0
BYD1_k127_4488237_14 membrane - - - 0.00000000000000000000000000006112 120.0
BYD1_k127_4488237_15 Protein of unknown function (DUF1232) - - - 0.00000000000000000000000008473 115.0
BYD1_k127_4488237_2 Protein of unknown function (DUF1116) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009861 574.0
BYD1_k127_4488237_3 FAD binding domain K00481 - 1.14.13.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 565.0
BYD1_k127_4488237_4 Soluble lytic murein transglycosylase L domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 564.0
BYD1_k127_4488237_5 COG1680 Beta-lactamase class C and other penicillin binding proteins K01286,K08641 - 3.4.13.22,3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009045 517.0
BYD1_k127_4488237_6 CoA binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 453.0
BYD1_k127_4488237_7 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 315.0
BYD1_k127_4488237_8 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 291.0
BYD1_k127_4488237_9 O-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001204 260.0
BYD1_k127_4543314_0 dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006158 528.0
BYD1_k127_4543314_1 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007023 513.0
BYD1_k127_4543314_2 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 478.0
BYD1_k127_4543314_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 422.0
BYD1_k127_4543314_4 abc transporter K02003,K05685 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 310.0
BYD1_k127_4543314_5 deoxyhypusine monooxygenase activity K01387,K03301 - 3.4.24.3 0.0000000000000000000000000000000000000000000000000002145 212.0
BYD1_k127_4548113_0 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006707 357.0
BYD1_k127_4548113_1 ATPases associated with a variety of cellular activities - - - 0.0000000000000000000000000000000000000000000000000000000000007435 213.0
BYD1_k127_4548113_2 DNA ligase K01971 - 6.5.1.1 0.000000000000000000000000000000000000000000000000000000000002831 210.0
BYD1_k127_4589909_0 - - - - 3.857e-258 812.0
BYD1_k127_4589909_1 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 9.019e-238 756.0
BYD1_k127_4589909_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001867 535.0
BYD1_k127_4589909_3 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.00000000000000000000000000000000000000000000000000000000000000000000000000005619 267.0
BYD1_k127_4589909_4 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005371 255.0
BYD1_k127_4589909_5 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000001611 209.0
BYD1_k127_4589909_6 EamA-like transporter family - - - 0.0000000000000004758 79.0
BYD1_k127_4655750_0 Pfam:DUF1446 - - - 9.186e-209 661.0
BYD1_k127_4655750_1 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 373.0
BYD1_k127_4655750_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 377.0
BYD1_k127_4655750_3 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 363.0
BYD1_k127_4655750_4 abc transporter K02049 - - 0.000000000000000000000000000000000000000000000000000000000000004171 218.0
BYD1_k127_4655750_5 - - - - 0.0000000000000000000000000000000000000000001173 166.0
BYD1_k127_4655750_6 Domain of unknown function (DUF4387) - - - 0.0000000000000000000000000000001485 135.0
BYD1_k127_4655750_7 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.000000000003185 73.0
BYD1_k127_4722131_0 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003523 286.0
BYD1_k127_4722131_1 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000001385 233.0
BYD1_k127_4722131_2 paraquat-inducible protein A K03808 - - 0.00000000000000000000000000000000000000006259 158.0
BYD1_k127_4722131_3 Phospholipase D Active site motif K01115 - 3.1.4.4 0.0000000000000000000000000000000000009402 145.0
BYD1_k127_4722131_4 Thioesterase superfamily - - - 0.000000000000000000000000002062 124.0
BYD1_k127_4722131_5 - - - - 0.0003533 51.0
BYD1_k127_4722131_6 MlaD protein - - - 0.0007044 46.0
BYD1_k127_4754432_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 1.529e-197 623.0
BYD1_k127_4754432_1 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003038 420.0
BYD1_k127_4754432_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.00000000000000000000000000000000000000000000000000000000000003194 231.0
BYD1_k127_4754432_3 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000639 207.0
BYD1_k127_4754432_4 Transcriptional regulator K15539 - - 0.000000000000000000000000000000000003928 151.0
BYD1_k127_4754432_5 Tetratricopeptide repeat K02656 - - 0.000000000000000000004142 96.0
BYD1_k127_4794220_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 4.13e-270 848.0
BYD1_k127_4794220_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007244 606.0
BYD1_k127_4794220_10 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000000000000000002355 236.0
BYD1_k127_4794220_11 binds to the 23S rRNA K02939 - - 0.0000000000000000000000000000000000000000000000000000001518 202.0
BYD1_k127_4794220_12 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000000000004422 194.0
BYD1_k127_4794220_13 CBS domain - - - 0.0000000000000000000000000000000000000002372 152.0
BYD1_k127_4794220_14 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.000000000000000000000000000000000000001084 155.0
BYD1_k127_4794220_15 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000174 142.0
BYD1_k127_4794220_16 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000002129 137.0
BYD1_k127_4794220_17 Iron-binding zinc finger CDGSH type - - - 0.0000000000000000000000000000007701 128.0
BYD1_k127_4794220_18 PFAM PhoH family protein K07175 - - 0.000000000000000000000000002603 110.0
BYD1_k127_4794220_19 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.00000000000000000005268 93.0
BYD1_k127_4794220_2 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 590.0
BYD1_k127_4794220_20 protein conserved in bacteria K09937 - - 0.000000000000000002371 86.0
BYD1_k127_4794220_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005786 564.0
BYD1_k127_4794220_4 HflC and HflK could encode or regulate a protease K04088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007689 489.0
BYD1_k127_4794220_5 Amidohydrolase K01686 - 4.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 465.0
BYD1_k127_4794220_6 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 422.0
BYD1_k127_4794220_7 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 388.0
BYD1_k127_4794220_8 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002192 383.0
BYD1_k127_4794220_9 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 304.0
BYD1_k127_4904553_0 COG3653 N-acyl-D-aspartate D-glutamate deacylase - - - 2.376e-269 838.0
BYD1_k127_4904553_1 Flavin-binding monooxygenase-like - - - 1.287e-243 766.0
BYD1_k127_4904553_10 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 322.0
BYD1_k127_4904553_11 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 321.0
BYD1_k127_4904553_12 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004256 278.0
BYD1_k127_4904553_13 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001293 278.0
BYD1_k127_4904553_14 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001298 252.0
BYD1_k127_4904553_15 oxidation-reduction process - - - 0.00000000000000000000000000000000000000000000000000000002317 205.0
BYD1_k127_4904553_16 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000001575 178.0
BYD1_k127_4904553_17 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000000000000000000000000000000000008768 154.0
BYD1_k127_4904553_18 FAD binding domain K00480 - 1.14.13.1 0.00000000000000000000000000000001504 129.0
BYD1_k127_4904553_2 Fumarate reductase flavoprotein C-term - - - 3.654e-205 653.0
BYD1_k127_4904553_3 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 541.0
BYD1_k127_4904553_4 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 418.0
BYD1_k127_4904553_5 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 432.0
BYD1_k127_4904553_6 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 399.0
BYD1_k127_4904553_7 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003515 372.0
BYD1_k127_4904553_8 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 366.0
BYD1_k127_4904553_9 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 350.0
BYD1_k127_4942955_0 Sulfatase K01130 - 3.1.6.1 5.019e-295 923.0
BYD1_k127_4942955_1 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000002901 241.0
BYD1_k127_4942955_2 ABC-type amino acid transport signal transduction systems periplasmic component domain K10001 GO:0003333,GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006810,GO:0006811,GO:0006820,GO:0006835,GO:0006836,GO:0006855,GO:0006865,GO:0008150,GO:0015711,GO:0015740,GO:0015800,GO:0015807,GO:0015813,GO:0015849,GO:0015893,GO:0016595,GO:0016597,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0034220,GO:0036094,GO:0042221,GO:0042493,GO:0042597,GO:0043167,GO:0043168,GO:0043177,GO:0044464,GO:0046942,GO:0050896,GO:0051179,GO:0051234,GO:0055085,GO:0070335,GO:0070778,GO:0071702,GO:0071705,GO:0098656,GO:1902475,GO:1903825,GO:1905039 - 0.00000000000000000008614 91.0
BYD1_k127_4942955_3 - - - - 0.00000000007709 66.0
BYD1_k127_4962619_0 reductase, alpha subunit K00394 - 1.8.99.2 0.0 1198.0
BYD1_k127_4962619_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 356.0
BYD1_k127_4962619_2 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 355.0
BYD1_k127_4962619_3 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000004774 228.0
BYD1_k127_4962619_4 Belongs to the sulfate adenylyltransferase family K00958 - 2.7.7.4 0.0000000000000000000000000000000000000002973 153.0
BYD1_k127_4962619_5 reductase beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000004662 131.0
BYD1_k127_4962619_6 - - - - 0.000000000000000000301 96.0
BYD1_k127_4962619_7 - - - - 0.000000000000001424 77.0
BYD1_k127_4965887_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly - - - 0.0 1418.0
BYD1_k127_4965887_1 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 291.0
BYD1_k127_4965887_2 Cation efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002332 238.0
BYD1_k127_4965887_3 HAD-superfamily hydrolase, subfamily IA, variant 3 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000009903 231.0
BYD1_k127_4965887_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000002798 185.0
BYD1_k127_4965887_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000005309 102.0
BYD1_k127_497461_0 PFAM glycoside hydrolase 15-related - - - 1.852e-246 775.0
BYD1_k127_497461_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001233 488.0
BYD1_k127_497461_2 Domain present in PSD-95, Dlg, and ZO-1/2. K08070 - 1.3.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008911 455.0
BYD1_k127_497461_3 NMT1-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 441.0
BYD1_k127_497461_4 ABC transporter K06020 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001274 351.0
BYD1_k127_4979873_0 HELICc2 K03722 - 3.6.4.12 2.423e-230 737.0
BYD1_k127_4979873_1 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 1.272e-195 625.0
BYD1_k127_4979873_10 synthesis repressor, PhaR - - - 0.0000000000000000000000000000000000000000000000000000000000005857 219.0
BYD1_k127_4979873_11 Bacterial type II and III secretion system protein - - - 0.0000000000000000000000000000000000000001636 161.0
BYD1_k127_4979873_12 PFAM extracellular solute-binding protein family 1 K02012 - - 0.000000000000001256 78.0
BYD1_k127_4979873_2 Belongs to the thiolase family K00626 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 592.0
BYD1_k127_4979873_3 epimerase dehydratase K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 461.0
BYD1_k127_4979873_4 PFAM Short-chain dehydrogenase reductase SDR K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 400.0
BYD1_k127_4979873_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 352.0
BYD1_k127_4979873_6 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 340.0
BYD1_k127_4979873_7 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002792 327.0
BYD1_k127_4979873_8 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 293.0
BYD1_k127_4979873_9 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.000000000000000000000000000000000000000000000000000000000000004717 223.0
BYD1_k127_5020340_0 Respiratory nitrate reductase alpha N-terminal K00370 - 1.7.5.1 0.0 2031.0
BYD1_k127_5020340_1 nitrite transporter K02575 - - 7.901e-318 977.0
BYD1_k127_5020340_2 Respiratory nitrate reductase beta C-terminal K00371,K17051 - 1.7.5.1 1.389e-283 885.0
BYD1_k127_5020340_3 nitrate nitrite transporter K02575 - - 1.74e-198 627.0
BYD1_k127_5020340_4 - - - - 0.0000000000000000000000000000000000000003665 156.0
BYD1_k127_5020340_5 cytochrome - - - 0.000003158 55.0
BYD1_k127_5037417_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 591.0
BYD1_k127_5037417_1 Aminotransferase K14261 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 501.0
BYD1_k127_5037417_2 hydrolase activity, acting on ester bonds K01561 - 3.8.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 371.0
BYD1_k127_5037417_3 protein histidine kinase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 354.0
BYD1_k127_5037417_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008411 267.0
BYD1_k127_5037417_5 Redoxin K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002354 231.0
BYD1_k127_5037417_6 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000002149 147.0
BYD1_k127_5037417_7 PFAM response regulator receiver - - - 0.000000000000000000000000196 110.0
BYD1_k127_5096351_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 5.741e-307 949.0
BYD1_k127_5096351_1 COG0017 Aspartyl asparaginyl-tRNA synthetases K01893 GO:0000166,GO:0003674,GO:0003824,GO:0004812,GO:0004816,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006421,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017076,GO:0019538,GO:0019752,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0034660,GO:0035639,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:0140101,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.1.1.22 6.191e-208 654.0
BYD1_k127_5096351_2 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000001083 185.0
BYD1_k127_5096351_3 Cell Wall Hydrolase - - - 0.000000000000000000000000003196 118.0
BYD1_k127_5102065_0 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00179 - 1.2.7.8 5.721e-231 724.0
BYD1_k127_5102065_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 499.0
BYD1_k127_5102065_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 438.0
BYD1_k127_5102065_3 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 290.0
BYD1_k127_5102065_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009647 269.0
BYD1_k127_5102065_5 Trap-type c4-dicarboxylate transport system, small permease component - - - 0.0000000000000000000000004601 112.0
BYD1_k127_5151680_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1060.0
BYD1_k127_5151680_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 482.0
BYD1_k127_5151680_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 417.0
BYD1_k127_5151680_3 Peptidase family M23 K08259 - 3.4.24.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 313.0
BYD1_k127_5151680_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000009493 107.0
BYD1_k127_5151680_5 PAS fold - - - 0.000000000000002607 86.0
BYD1_k127_5151680_6 Protein of unknown function (DUF721) - - - 0.0002242 50.0
BYD1_k127_5180437_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1126.0
BYD1_k127_5180437_1 cAMP phosphodiesterases class-II K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 359.0
BYD1_k127_5180437_2 cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 311.0
BYD1_k127_5180437_3 GAF domain - - - 0.00000000000000000000000000000006622 128.0
BYD1_k127_521379_0 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 0.0 1261.0
BYD1_k127_521379_1 Major facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 545.0
BYD1_k127_521379_10 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000002503 88.0
BYD1_k127_521379_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 320.0
BYD1_k127_521379_3 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000175 322.0
BYD1_k127_521379_4 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001244 282.0
BYD1_k127_521379_5 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000009288 258.0
BYD1_k127_521379_6 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.0000000000000000000000000000000000000000000000005266 183.0
BYD1_k127_521379_7 Tripartite tricarboxylate transporter TctA family - - - 0.0000000000000000000006028 96.0
BYD1_k127_521379_8 COG0457 FOG TPR repeat - - - 0.0000000000000000000007641 102.0
BYD1_k127_521379_9 PFAM Hpt domain protein - - - 0.0000000000000000004134 90.0
BYD1_k127_5217417_0 PFAM Glycosyl - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 323.0
BYD1_k127_5217417_1 Glycosyl transferase, group 1 K13668 - 2.4.1.346 0.0000000000000000000000000000000000000000000000000000000000000000000000000005522 271.0
BYD1_k127_5217417_2 ABC transporter transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008036 258.0
BYD1_k127_5217417_3 Capsule polysaccharide - - - 0.000000000000000000000000000000000000000000000000000198 203.0
BYD1_k127_5217417_4 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.000000000000000000000000000000000000000000000000003971 197.0
BYD1_k127_5217417_5 methyltransferase - - - 0.0000000000000000000000000000000000000000000001663 170.0
BYD1_k127_5217417_6 Methyltransferase domain - - - 0.00000000000000000000000000000007279 134.0
BYD1_k127_5275879_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 2.346e-311 989.0
BYD1_k127_5275879_1 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 484.0
BYD1_k127_5275879_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000002571 73.0
BYD1_k127_5275879_2 Two component transcriptional regulator, winged helix family K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 315.0
BYD1_k127_5275879_3 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000435 247.0
BYD1_k127_5275879_4 Efflux transporter, outer membrane factor lipoprotein, NodT family K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000005637 248.0
BYD1_k127_5275879_5 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000001737 211.0
BYD1_k127_5275879_6 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000009625 183.0
BYD1_k127_5275879_8 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000001428 98.0
BYD1_k127_5275879_9 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000008059 70.0
BYD1_k127_5378223_0 SMART alpha amylase, catalytic sub domain K01187 - 3.2.1.20 2.086e-243 762.0
BYD1_k127_5378223_1 Protein involved in catalytic activity, cation binding and carbohydrate metabolic process K05343 - 3.2.1.1,5.4.99.16 5.995e-214 672.0
BYD1_k127_5378223_10 Protein of unknown function (DUF433) - - - 0.00008576 51.0
BYD1_k127_5378223_11 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0003772 48.0
BYD1_k127_5378223_2 ABC transporter C-terminal domain K15738 - - 1.335e-199 636.0
BYD1_k127_5378223_3 Restriction endonuclease K07448 - - 0.00000000000000000000000000000000000001027 151.0
BYD1_k127_5378223_4 PIN domain - - - 0.0000000000000000000000000001634 123.0
BYD1_k127_5378223_5 PIN domain - - - 0.0000000000000000000000000007777 120.0
BYD1_k127_5378223_6 - - - - 0.0000000000002612 71.0
BYD1_k127_5378223_7 BON domain K04065 - - 0.00000000002483 69.0
BYD1_k127_5378223_8 BON domain K04065 - - 0.000004154 53.0
BYD1_k127_5378223_9 InterPro IPR007367 - - - 0.00001043 49.0
BYD1_k127_552626_0 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 402.0
BYD1_k127_552626_1 haloacid dehalogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005481 288.0
BYD1_k127_552626_2 transcriptional regulator - - - 0.00000000000000000000000000000000000002515 149.0
BYD1_k127_552626_3 KR domain K18009 - 1.1.1.304,1.1.1.76 0.00005127 46.0
BYD1_k127_5617913_0 Putative nucleotide-binding of sugar-metabolising enzyme K21948 - 2.7.1.217 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 392.0
BYD1_k127_5617913_1 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 355.0
BYD1_k127_5617913_2 SMP-30/Gluconolaconase/LRE-like region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001595 272.0
BYD1_k127_5617913_3 Class II Aldolase and Adducin N-terminal domain K22130 - 4.1.1.104 0.00000000000000000000000000000000000000000000000000000000000000000000000000001517 265.0
BYD1_k127_5617913_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000002747 123.0
BYD1_k127_5617913_5 Antibiotic biosynthesis monooxygenase - - - 0.000000000000000000000001293 118.0
BYD1_k127_5617913_6 COG1593 TRAP-type C4-dicarboxylate transport system large permease component K11690 - - 0.000000001379 60.0
BYD1_k127_5617913_7 - - - - 0.0001545 47.0
BYD1_k127_5626855_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0 1485.0
BYD1_k127_5626855_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004987 500.0
BYD1_k127_5626855_10 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000003624 143.0
BYD1_k127_5626855_11 Histidine kinase - - - 0.00000000000000000000000000000009322 130.0
BYD1_k127_5626855_12 response regulator, receiver - - - 0.000000000000000000006394 100.0
BYD1_k127_5626855_13 Two component transcriptional regulator, LuxR family - - - 0.0000000000000009321 82.0
BYD1_k127_5626855_14 histidine kinase HAMP region domain protein - - - 0.000000000000007237 87.0
BYD1_k127_5626855_15 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000002969 55.0
BYD1_k127_5626855_16 - - - - 0.000885 46.0
BYD1_k127_5626855_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 483.0
BYD1_k127_5626855_3 PAS fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006396 362.0
BYD1_k127_5626855_4 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000364 300.0
BYD1_k127_5626855_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000003179 214.0
BYD1_k127_5626855_6 helix_turn_helix, Lux Regulon K14979 - - 0.000000000000000000000000000000000000000000000000000000001336 215.0
BYD1_k127_5626855_7 N-terminal half of MaoC dehydratase - - - 0.00000000000000000000000000000000000000000000004147 173.0
BYD1_k127_5626855_8 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000005453 166.0
BYD1_k127_5626855_9 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000001264 149.0
BYD1_k127_5685464_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1e-323 1014.0
BYD1_k127_5685464_1 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008194 471.0
BYD1_k127_5685464_2 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 347.0
BYD1_k127_5685464_3 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001816 230.0
BYD1_k127_5685464_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000001226 198.0
BYD1_k127_5685464_5 phosphatidate phosphatase activity - - - 0.000000000000000000002836 93.0
BYD1_k127_5688682_0 Amidohydrolase family - - - 5.443e-198 624.0
BYD1_k127_5688682_1 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007596 314.0
BYD1_k127_5688682_2 PFAM secretion protein HlyD family protein K03543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001956 283.0
BYD1_k127_5688682_3 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007234 271.0
BYD1_k127_5688682_4 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000000000000005184 202.0
BYD1_k127_5688682_5 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000006698 161.0
BYD1_k127_5688682_6 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000359 98.0
BYD1_k127_5708291_0 Amidohydrolase K07045 - - 8.475e-199 639.0
BYD1_k127_5708291_1 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 456.0
BYD1_k127_5708291_10 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000002974 237.0
BYD1_k127_5708291_11 long-chain fatty acid transport protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002807 230.0
BYD1_k127_5708291_12 High-affinity branched-chain amino acid transport protein (ABC superfamily K01996 - - 0.00000000000000000000000000000000000000000000000000000000009156 213.0
BYD1_k127_5708291_13 Flavodoxin-like fold K19784 - - 0.0000000000000000000000000000000000000000000000000002732 190.0
BYD1_k127_5708291_14 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000002052 149.0
BYD1_k127_5708291_2 Iron/manganese superoxide dismutases, C-terminal domain K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003827 450.0
BYD1_k127_5708291_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 357.0
BYD1_k127_5708291_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 350.0
BYD1_k127_5708291_5 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003194 289.0
BYD1_k127_5708291_6 Chromate resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003313 277.0
BYD1_k127_5708291_7 Pyruvate phosphate dikinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002866 281.0
BYD1_k127_5708291_8 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000002503 235.0
BYD1_k127_5708291_9 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000003583 238.0
BYD1_k127_5725788_0 Major facilitator superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 604.0
BYD1_k127_5725788_1 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000518 266.0
BYD1_k127_5725788_2 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000008312 246.0
BYD1_k127_5725788_3 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000003383 81.0
BYD1_k127_5725788_4 - - - - 0.00008031 55.0
BYD1_k127_5738279_0 Catalyzes the reversible formation of glyoxylate and succinate from isocitrate K01637 - 4.1.3.1 1.891e-220 691.0
BYD1_k127_5738279_1 twitching motility protein K02670 - - 3.156e-207 651.0
BYD1_k127_5738279_10 PFAM ABC-2 type transporter K09694 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000371 265.0
BYD1_k127_5738279_11 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000322 242.0
BYD1_k127_5738279_12 Alpha beta K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000004786 244.0
BYD1_k127_5738279_13 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005797 246.0
BYD1_k127_5738279_14 lipid kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000001598 217.0
BYD1_k127_5738279_15 Uncharacterised protein family (UPF0093) K08973 - - 0.0000000000000000000000000000000000000000000000000001329 200.0
BYD1_k127_5738279_16 Ferredoxin - - - 0.000000000000000000000000000000000000000000000001654 174.0
BYD1_k127_5738279_17 integral membrane protein K02221 - - 0.0000000000000000000000000000000000000000157 161.0
BYD1_k127_5738279_18 Belongs to the UPF0235 family K09131 - - 0.00000000000000001122 92.0
BYD1_k127_5738279_2 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 1.187e-195 631.0
BYD1_k127_5738279_3 twitching motility protein K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 608.0
BYD1_k127_5738279_4 Belongs to the methyltransferase superfamily K07444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002314 436.0
BYD1_k127_5738279_5 PFAM ABC transporter related K01990,K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002396 415.0
BYD1_k127_5738279_6 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000423 364.0
BYD1_k127_5738279_7 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 349.0
BYD1_k127_5738279_8 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004054 276.0
BYD1_k127_5738279_9 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001926 273.0
BYD1_k127_5824446_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 4.595e-307 948.0
BYD1_k127_5824446_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 550.0
BYD1_k127_5824446_10 Protein of unknown function (DUF3106) - - - 0.0000000000000000000000001953 112.0
BYD1_k127_5824446_11 Protein of unknown function (DUF3619) - - - 0.00000000000008596 78.0
BYD1_k127_5824446_2 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007889 398.0
BYD1_k127_5824446_3 Permease, YjgP YjgQ family K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009982 391.0
BYD1_k127_5824446_4 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000418 346.0
BYD1_k127_5824446_5 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008066 320.0
BYD1_k127_5824446_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006676 303.0
BYD1_k127_5824446_7 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005955 254.0
BYD1_k127_5824446_8 Acetolactate synthase small K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000003838 256.0
BYD1_k127_5824446_9 RDD family - - - 0.00000000000000000000000005787 111.0
BYD1_k127_5844110_0 Domain of unknown function (DUF3394) - - - 1.193e-256 803.0
BYD1_k127_5844110_1 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009989 475.0
BYD1_k127_5844110_2 Tartrate K01677 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003798 432.0
BYD1_k127_5844110_3 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00245 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 357.0
BYD1_k127_5844110_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 344.0
BYD1_k127_5844110_5 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 302.0
BYD1_k127_5844110_6 Chalcone isomerase-like - - - 0.000000000000000000000000000000000000000000000000000000000008411 213.0
BYD1_k127_5844110_7 D-galactarate dehydratase / Altronate hydrolase, C terminus K16846,K16850 - 4.2.1.7,4.4.1.24 0.00000000000000000000000000009189 115.0
BYD1_k127_5844110_8 succinate dehydrogenase K00246 - - 0.0000000000000000000000000002445 119.0
BYD1_k127_5844110_9 Succinate dehydrogenase/Fumarate reductase transmembrane subunit - - - 0.00000000000000000000000002397 116.0
BYD1_k127_5855684_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1032.0
BYD1_k127_5855684_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1016.0
BYD1_k127_5855684_10 tRNA pseudouridylate synthase B C-terminal domain K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007805 280.0
BYD1_k127_5855684_11 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008783 276.0
BYD1_k127_5855684_12 S4 RNA-binding domain K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000005776 270.0
BYD1_k127_5855684_13 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001437 262.0
BYD1_k127_5855684_14 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001555 249.0
BYD1_k127_5855684_15 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000001682 232.0
BYD1_k127_5855684_16 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000005917 212.0
BYD1_k127_5855684_17 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000001767 172.0
BYD1_k127_5855684_18 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.00000000000000000000000000000003042 127.0
BYD1_k127_5855684_19 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.0000000000000000000000000000002043 129.0
BYD1_k127_5855684_2 Pyridine nucleotide-disulphide oxidoreductase - - - 5.116e-264 824.0
BYD1_k127_5855684_20 - - - - 0.00002815 49.0
BYD1_k127_5855684_21 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.00003926 48.0
BYD1_k127_5855684_3 Participates in both transcription termination and antitermination K02600 - - 4.549e-216 680.0
BYD1_k127_5855684_4 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 4.51e-202 647.0
BYD1_k127_5855684_5 Tripartite tricarboxylate transporter TctA family K07793 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 525.0
BYD1_k127_5855684_6 dehydrogenase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 438.0
BYD1_k127_5855684_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 351.0
BYD1_k127_5855684_8 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008125 349.0
BYD1_k127_5855684_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007092 321.0
BYD1_k127_5870812_0 Malic enzyme, NAD binding domain K00029 - 1.1.1.40 2.823e-241 757.0
BYD1_k127_5870812_1 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 417.0
BYD1_k127_5870812_2 FIST N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 322.0
BYD1_k127_5870812_3 - - - - 0.000000000000000001296 87.0
BYD1_k127_5893688_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1715.0
BYD1_k127_5893688_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1429.0
BYD1_k127_5893688_10 Sulfate permease family K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 633.0
BYD1_k127_5893688_11 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002383 600.0
BYD1_k127_5893688_12 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 596.0
BYD1_k127_5893688_13 PFAM ABC transporter K02471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 586.0
BYD1_k127_5893688_14 glycolate oxidase subunit GlcD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008188 524.0
BYD1_k127_5893688_15 7TM receptor with intracellular HD hydrolase K07037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006321 482.0
BYD1_k127_5893688_16 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006644 455.0
BYD1_k127_5893688_17 PhoH-like protein K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006106 419.0
BYD1_k127_5893688_18 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 416.0
BYD1_k127_5893688_19 Mo-co oxidoreductase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 400.0
BYD1_k127_5893688_2 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 1.335e-296 940.0
BYD1_k127_5893688_20 Ribonuclease E/G family K08300,K08301 - 3.1.26.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 402.0
BYD1_k127_5893688_21 ArgK protein K07588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 391.0
BYD1_k127_5893688_22 ABC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 391.0
BYD1_k127_5893688_23 Zinc-binding dehydrogenase K12957,K13953,K19961 - 1.1.1.1,1.1.1.258 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 381.0
BYD1_k127_5893688_24 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002406 379.0
BYD1_k127_5893688_25 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 366.0
BYD1_k127_5893688_26 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003202 315.0
BYD1_k127_5893688_27 RecQ zinc-binding K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 328.0
BYD1_k127_5893688_28 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 311.0
BYD1_k127_5893688_29 zinc protease protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 298.0
BYD1_k127_5893688_3 Methylmalonyl-CoA mutase K01848,K11942 - 5.4.99.13,5.4.99.2 1.551e-253 811.0
BYD1_k127_5893688_30 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 288.0
BYD1_k127_5893688_31 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000648 282.0
BYD1_k127_5893688_32 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007617 289.0
BYD1_k127_5893688_33 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005132 288.0
BYD1_k127_5893688_34 alpha/beta hydrolase fold K01066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003689 279.0
BYD1_k127_5893688_35 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004775 241.0
BYD1_k127_5893688_36 Glutathione S-Transferase K00799 GO:0003674,GO:0003824,GO:0004364,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0016491,GO:0016740,GO:0016765,GO:0030611,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0055114 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000441 240.0
BYD1_k127_5893688_37 B12 binding domain K01849 - 5.4.99.2 0.00000000000000000000000000000000000000000000000000000000000003945 229.0
BYD1_k127_5893688_38 translation release factor activity K03265 GO:0001666,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0008150,GO:0009628,GO:0016020,GO:0030312,GO:0036293,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0070482,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000005678 227.0
BYD1_k127_5893688_39 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000002298 209.0
BYD1_k127_5893688_4 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 8.628e-251 789.0
BYD1_k127_5893688_40 regulatory - - - 0.000000000000000000000000000000000000000000000000000002214 201.0
BYD1_k127_5893688_41 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000378 200.0
BYD1_k127_5893688_42 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000000000000000005763 194.0
BYD1_k127_5893688_43 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000007128 198.0
BYD1_k127_5893688_44 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000005625 180.0
BYD1_k127_5893688_45 Belongs to the enoyl-CoA hydratase isomerase family K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000003111 178.0
BYD1_k127_5893688_46 - - - - 0.00000000000000000000000000000000000000000001993 165.0
BYD1_k127_5893688_47 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000008689 164.0
BYD1_k127_5893688_48 NIPSNAP - - - 0.0000000000000000000000000000000000000000004829 159.0
BYD1_k127_5893688_49 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000001768 161.0
BYD1_k127_5893688_5 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 1.192e-244 764.0
BYD1_k127_5893688_50 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.0000000000000000000000000000000000000000084 164.0
BYD1_k127_5893688_51 CBS domain K03699 - - 0.000000000000000000000000000000000002163 154.0
BYD1_k127_5893688_52 helix_turn_helix, arabinose operon control protein - - - 0.000000000000000000000000000000000009861 146.0
BYD1_k127_5893688_53 Redoxin domain protein - - - 0.0000000000000000000000000000000000346 147.0
BYD1_k127_5893688_54 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000004367 144.0
BYD1_k127_5893688_55 Phospholipase Carboxylesterase K06999 GO:0003674,GO:0003824,GO:0016787,GO:0016788,GO:0052689 - 0.0000000000000000000000000000000006873 139.0
BYD1_k127_5893688_56 Thioesterase superfamily - - - 0.0000000000000000000000000000001009 130.0
BYD1_k127_5893688_57 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.00000000000000000000000000001094 127.0
BYD1_k127_5893688_58 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07025 - - 0.0000000000000000000000000001381 129.0
BYD1_k127_5893688_59 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000001583 116.0
BYD1_k127_5893688_6 Carboxyl transferase domain - - - 5.03e-237 747.0
BYD1_k127_5893688_60 Regulatory protein, FmdB family - - - 0.0000000000000000000000321 109.0
BYD1_k127_5893688_61 Aminotransferase K14155 - 4.4.1.8 0.00000000000000000000006918 102.0
BYD1_k127_5893688_62 Receptor family ligand binding region K01999 - - 0.000000000000000001506 98.0
BYD1_k127_5893688_63 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000008292 73.0
BYD1_k127_5893688_7 Belongs to the TPP enzyme family K01652 - 2.2.1.6 1.951e-224 713.0
BYD1_k127_5893688_8 Acyclic terpene utilisation family protein AtuA - - - 2.65e-210 666.0
BYD1_k127_5893688_9 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 1.102e-205 646.0
BYD1_k127_5901635_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004675 325.0
BYD1_k127_5901635_1 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000002534 186.0
BYD1_k127_5901635_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.000000000000000000000000000000000000000000000000111 183.0
BYD1_k127_5933976_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.373e-238 744.0
BYD1_k127_5933976_1 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 424.0
BYD1_k127_5933976_2 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 403.0
BYD1_k127_5933976_3 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 302.0
BYD1_k127_5933976_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001191 258.0
BYD1_k127_5933976_5 membrane protein domain - - - 0.0000000000000000000000000000000000000000000000000000000008172 209.0
BYD1_k127_5933976_6 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000008599 188.0
BYD1_k127_5933976_7 Membrane - - - 0.000000000000000000000000000000000000000000004353 178.0
BYD1_k127_5950507_0 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 441.0
BYD1_k127_5950507_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 337.0
BYD1_k127_5950507_2 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008342 338.0
BYD1_k127_5950507_3 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000005255 200.0
BYD1_k127_5950507_4 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.000002807 59.0
BYD1_k127_6089916_0 AMP-binding enzyme C-terminal domain K00666,K01897 - 6.2.1.3 1.454e-208 662.0
BYD1_k127_6089916_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008275 430.0
BYD1_k127_6089916_10 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.00000000000000000000000004206 109.0
BYD1_k127_6089916_11 - - - - 0.0000000006291 61.0
BYD1_k127_6089916_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004138 433.0
BYD1_k127_6089916_3 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 384.0
BYD1_k127_6089916_4 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000223 282.0
BYD1_k127_6089916_5 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006409 251.0
BYD1_k127_6089916_6 GTP cyclohydrolase I K01495 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000001045 245.0
BYD1_k127_6089916_7 COG1247 Sortase and related acyltransferases K03823 - 2.3.1.183 0.0000000000000000000000000000000000000000000000000000000000001846 216.0
BYD1_k127_6089916_8 - - - - 0.000000000000000000000000000000000000131 146.0
BYD1_k127_6089916_9 protein conserved in bacteria K09796 - - 0.00000000000000000000000000001072 124.0
BYD1_k127_609116_0 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 1.718e-267 841.0
BYD1_k127_609116_1 Flavin containing amine oxidoreductase - - - 1.136e-226 715.0
BYD1_k127_609116_2 Glycine cleavage T-protein C-terminal barrel domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 455.0
BYD1_k127_609116_3 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 310.0
BYD1_k127_609116_4 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 294.0
BYD1_k127_609116_5 depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 298.0
BYD1_k127_609116_6 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007752 282.0
BYD1_k127_609116_7 Flavin containing amine oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000001329 244.0
BYD1_k127_609116_8 TPM domain K08988 - - 0.00000000000000000000000000000000000000000000000000547 185.0
BYD1_k127_609116_9 helix_turn_helix, mercury resistance K19591,K19592 - - 0.00000000000000000000000000000000000000000000002189 174.0
BYD1_k127_6134047_0 MmgE/PrpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 434.0
BYD1_k127_6134047_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 297.0
BYD1_k127_6134047_2 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006518 269.0
BYD1_k127_6134047_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 - 4.4.1.5 0.000000000000000000000000000000007722 135.0
BYD1_k127_6155913_0 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 523.0
BYD1_k127_6155913_1 Nitrate reductase K00374 - 1.7.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000605 295.0
BYD1_k127_6155913_2 Nitrate reductase, delta subunit K00373 - - 0.00000000000000000000000000000000000000000000004606 177.0
BYD1_k127_6155913_3 Respiratory nitrate reductase beta C-terminal K00371 - 1.7.5.1 0.000000000000000000000000000000000000002013 148.0
BYD1_k127_6155913_4 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000714 153.0
BYD1_k127_6155913_5 universal stress protein - - - 0.00000000000000000000000000000007571 131.0
BYD1_k127_6155913_6 Rubrerythrin - - - 0.0000000000000000014 96.0
BYD1_k127_6155913_7 Nitrate reductase K02571 - - 0.0000000001991 64.0
BYD1_k127_6155913_8 - - - - 0.00006473 53.0
BYD1_k127_6202490_0 Domain of unknown function (DUF3400) - - - 0.0 1695.0
BYD1_k127_6202490_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1091.0
BYD1_k127_6202490_10 Protein of unknown function (DUF4197) - - - 0.0000000000000000002851 87.0
BYD1_k127_6202490_11 Protein of unknown function (DUF2782) - - - 0.0000000000000000004134 90.0
BYD1_k127_6202490_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 3.918e-203 642.0
BYD1_k127_6202490_3 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002467 381.0
BYD1_k127_6202490_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 329.0
BYD1_k127_6202490_5 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008122 328.0
BYD1_k127_6202490_6 - - - - 0.00000000000000000000000000000000000000000000000000001116 204.0
BYD1_k127_6202490_7 Protein of unknown function (DUF971) - - - 0.0000000000000000000000000000000000000000000000000004575 186.0
BYD1_k127_6202490_8 Tim44 - - - 0.00000000000000000000000000000000000000000000002027 183.0
BYD1_k127_6202490_9 PFAM Sterol-binding domain protein K03690 - - 0.0000000000000000000000000000000276 133.0
BYD1_k127_6213917_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11745,K11747 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 518.0
BYD1_k127_6213917_1 FAD binding domain K09828 - 1.3.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 453.0
BYD1_k127_6213917_2 - - - - 0.00000000000000000000000000000000000002879 155.0
BYD1_k127_6213917_3 - - - - 0.000000000000000000000000005552 115.0
BYD1_k127_6240540_0 Sulfite reductase K00381 - 1.8.1.2 1.021e-251 788.0
BYD1_k127_6240540_1 Bacterial regulatory helix-turn-helix protein, lysR family K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 433.0
BYD1_k127_6240540_2 PFAM PHB de-polymerase domain protein K05973 - 3.1.1.75 0.00000000000000000000000000000000000000000000000000000001328 199.0
BYD1_k127_6240540_3 Bacterial protein of unknown function (DUF934) - - - 0.000000000000000000000001799 108.0
BYD1_k127_6270305_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 6.223e-316 977.0
BYD1_k127_6270305_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 498.0
BYD1_k127_6270305_2 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 458.0
BYD1_k127_6270305_3 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008956 326.0
BYD1_k127_6270305_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 301.0
BYD1_k127_6270305_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008835 276.0
BYD1_k127_6270305_6 Belongs to the Fur family K03711 - - 0.0000000000000000000000000000000000000000000000000000000000000003773 222.0
BYD1_k127_6270305_7 - - - - 0.000000000000000000000000000000000000000000000000532 177.0
BYD1_k127_6270305_8 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000001668 128.0
BYD1_k127_6270305_9 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000162 116.0
BYD1_k127_6360662_0 Succinyl-CoA ligase like flavodoxin domain - - - 0.0 1231.0
BYD1_k127_6360662_1 GTP-binding protein K06207 - - 1.138e-307 951.0
BYD1_k127_6360662_10 Belongs to the class I fructose-bisphosphate aldolase family K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 400.0
BYD1_k127_6360662_11 ATPases associated with a variety of cellular activities - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 376.0
BYD1_k127_6360662_12 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009933 385.0
BYD1_k127_6360662_13 ABC-type uncharacterized transport system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000066 366.0
BYD1_k127_6360662_14 PFAM conserved K07795 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 347.0
BYD1_k127_6360662_15 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008738 330.0
BYD1_k127_6360662_16 PFAM amine oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 312.0
BYD1_k127_6360662_17 ABC-2 family transporter protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000629 291.0
BYD1_k127_6360662_18 NAD-dependent epimerase dehydratase K18981 - 1.1.1.203 0.00000000000000000000000000000000000000000000000000000000000000000000000000003339 278.0
BYD1_k127_6360662_19 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000002242 253.0
BYD1_k127_6360662_2 elongation factor G K02355 - - 5.215e-294 916.0
BYD1_k127_6360662_20 FCD - - - 0.00000000000000000000000000000000000000000000000000000000000001117 224.0
BYD1_k127_6360662_21 amidohydrolase 2 K18982 - 5.4.1.4 0.0000000000000000000000000000000000000000000000000000000000001029 237.0
BYD1_k127_6360662_22 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000009506 201.0
BYD1_k127_6360662_23 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000001655 205.0
BYD1_k127_6360662_24 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.000000000000000000000000000000000000000000000000000002688 195.0
BYD1_k127_6360662_25 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000005584 185.0
BYD1_k127_6360662_26 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000004207 125.0
BYD1_k127_6360662_27 Tripartite tricarboxylate transporter TctB family K07794 - - 0.000000000000000000000000001859 117.0
BYD1_k127_6360662_28 Domain of unknown function (DUF4340) - - - 0.000000000000000000001492 108.0
BYD1_k127_6360662_29 Protein of unknown function (DUF2721) - - - 0.000000000000000004927 89.0
BYD1_k127_6360662_3 ATP citrate lyase citrate-binding - - - 1.582e-230 718.0
BYD1_k127_6360662_30 Anti sigma-E protein RseA K03597 - - 0.00001888 50.0
BYD1_k127_6360662_4 Tripartite tricarboxylate transporter TctA family K07793 - - 6.94e-210 662.0
BYD1_k127_6360662_5 Domain of unknown function DUF21 K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 539.0
BYD1_k127_6360662_6 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007498 451.0
BYD1_k127_6360662_7 PhoD-like phosphatase, N-terminal domain K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 430.0
BYD1_k127_6360662_8 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 418.0
BYD1_k127_6360662_9 TRAP dicarboxylate transporter K21395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008175 404.0
BYD1_k127_6369219_0 Tripartite tricarboxylate transporter TctA family K07793 - - 3.892e-220 696.0
BYD1_k127_6369219_1 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 443.0
BYD1_k127_6369219_2 TIGRFAM pyridine nucleotide-disulfide oxidoreductase family protein K01008 - 2.7.9.3 0.00000000000000000000000000000000005507 139.0
BYD1_k127_6369219_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000001717 89.0
BYD1_k127_6395886_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 8.302e-256 801.0
BYD1_k127_6395886_1 Aminomethyltransferase folate-binding domain K00302 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.3.1 6.017e-249 783.0
BYD1_k127_6395886_10 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.00000000000000000000000000000000000005034 143.0
BYD1_k127_6395886_11 Tellurite resistance protein TerB - - - 0.000000000000000001402 91.0
BYD1_k127_6395886_2 Sarcosine oxidase beta subunit family K00303 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.5.3.1 8.149e-222 702.0
BYD1_k127_6395886_3 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 544.0
BYD1_k127_6395886_4 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 480.0
BYD1_k127_6395886_5 Isochorismatase family K09020 - 3.5.1.110 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 381.0
BYD1_k127_6395886_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 344.0
BYD1_k127_6395886_7 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 356.0
BYD1_k127_6395886_8 COG0410 ABC-type branched-chain amino acid transport systems ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001217 271.0
BYD1_k127_6395886_9 PFAM 4-vinyl reductase, 4VR - - - 0.0000000000000000000000000000000000000000000000000001849 204.0
BYD1_k127_6419284_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.779e-206 663.0
BYD1_k127_6419284_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009728 602.0
BYD1_k127_6419284_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007699 577.0
BYD1_k127_6419284_3 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 493.0
BYD1_k127_6419284_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 460.0
BYD1_k127_6419284_5 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003745 459.0
BYD1_k127_6419284_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003844 463.0
BYD1_k127_6419284_7 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 440.0
BYD1_k127_6419284_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000417 245.0
BYD1_k127_6419284_9 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000001643 89.0
BYD1_k127_6445182_0 Haloacid dehalogenase, type II K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000836 368.0
BYD1_k127_6445182_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001399 259.0
BYD1_k127_6445182_2 Amidohydrolase family - - - 0.00000000000000000000006955 104.0
BYD1_k127_6445182_3 - - - - 0.00000000000000000001913 95.0
BYD1_k127_6445519_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 2.84e-233 733.0
BYD1_k127_6445519_1 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 6.585e-232 732.0
BYD1_k127_6445519_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.000000000000000000000000000000000000000000000000000000000000000000000000005463 258.0
BYD1_k127_6445519_11 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002273 266.0
BYD1_k127_6445519_12 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000002443 145.0
BYD1_k127_6445519_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0000183,GO:0001302,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016874,GO:0016879,GO:0018130,GO:0019219,GO:0019222,GO:0019357,GO:0019358,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032502,GO:0034641,GO:0034654,GO:0040029,GO:0043094,GO:0043173,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046497,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0051276,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000625 582.0
BYD1_k127_6445519_3 Extracellular liganD-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 553.0
BYD1_k127_6445519_4 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 395.0
BYD1_k127_6445519_5 Dimerisation domain of Zinc Transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000583 374.0
BYD1_k127_6445519_6 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007417 349.0
BYD1_k127_6445519_7 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004861 312.0
BYD1_k127_6445519_8 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001016 283.0
BYD1_k127_6445519_9 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004042 267.0
BYD1_k127_6509227_0 TOBE domain K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 509.0
BYD1_k127_6509227_1 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 428.0
BYD1_k127_6509227_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 304.0
BYD1_k127_6509227_3 Binding-protein-dependent transport system inner membrane component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000605 261.0
BYD1_k127_6509227_4 C4-dicarboxylate ABC transporter permease - - - 0.0000000000000000000003616 97.0
BYD1_k127_6603676_0 AcrB/AcrD/AcrF family K03296,K18138 - - 7.967e-214 676.0
BYD1_k127_6603676_1 Outer membrane efflux protein K18139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 395.0
BYD1_k127_6603676_2 Thioesterase - - - 0.000004629 49.0
BYD1_k127_6625715_0 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000000000000008375 214.0
BYD1_k127_6625715_1 transcriptional regulator K07734 - - 0.0000000000000000000000000000000000000000000000000003181 193.0
BYD1_k127_6625715_2 Haloacid dehalogenase-like hydrolase K07025 - - 0.00000000000000000000000000000000002653 143.0
BYD1_k127_6625715_3 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000013 115.0
BYD1_k127_6625715_4 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000007233 63.0
BYD1_k127_6625715_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.000000002313 58.0
BYD1_k127_6625715_6 - - - - 0.0000139 52.0
BYD1_k127_6632_0 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 523.0
BYD1_k127_6632_1 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 438.0
BYD1_k127_6632_2 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 436.0
BYD1_k127_6632_3 peptidase S1 and S6, chymotrypsin Hap - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 300.0
BYD1_k127_6632_4 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000256 243.0
BYD1_k127_6632_5 - - - - 0.000000005899 65.0
BYD1_k127_6632_6 Belongs to the 'phage' integrase family - - - 0.0000007448 53.0
BYD1_k127_6632_7 peptidase S1 and S6, chymotrypsin Hap - - - 0.00009429 51.0
BYD1_k127_6632_9 Phage integrase family - - - 0.0001601 48.0
BYD1_k127_6658494_0 KaiC K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 590.0
BYD1_k127_6658494_1 Tartrate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 561.0
BYD1_k127_6658494_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 338.0
BYD1_k127_6658494_11 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008075 346.0
BYD1_k127_6658494_12 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 327.0
BYD1_k127_6658494_13 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 339.0
BYD1_k127_6658494_14 phytoene K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 321.0
BYD1_k127_6658494_15 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 333.0
BYD1_k127_6658494_16 Permeases of the drug metabolite transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001571 294.0
BYD1_k127_6658494_17 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 288.0
BYD1_k127_6658494_18 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001973 293.0
BYD1_k127_6658494_19 Glycoprotease family K14742 - - 0.000000000000000000000000000000000000000000000000000000004094 205.0
BYD1_k127_6658494_2 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 581.0
BYD1_k127_6658494_20 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000001028 203.0
BYD1_k127_6658494_21 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.000000000000000000000000000000000000000000000000000009523 196.0
BYD1_k127_6658494_22 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000008112 166.0
BYD1_k127_6658494_23 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789 - 2.3.1.128 0.0000000000000000000000000000000000004715 148.0
BYD1_k127_6658494_24 transcriptional regulator K07734 - - 0.000000000000000000000000006322 113.0
BYD1_k127_6658494_25 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000596 113.0
BYD1_k127_6658494_3 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 505.0
BYD1_k127_6658494_4 Tartrate dehydrogenase K07246 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007751 485.0
BYD1_k127_6658494_5 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 467.0
BYD1_k127_6658494_6 Phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001217 399.0
BYD1_k127_6658494_7 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000521 392.0
BYD1_k127_6658494_8 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 384.0
BYD1_k127_6658494_9 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003582 347.0
BYD1_k127_6660381_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 8.167e-297 917.0
BYD1_k127_6660381_1 Pyruvate:ferredoxin oxidoreductase core domain II K18355 - 1.2.1.58 8.727e-195 614.0
BYD1_k127_6660381_2 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K18356 - 1.2.1.58,1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 535.0
BYD1_k127_6660381_3 LUD domain K18929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 518.0
BYD1_k127_6660381_4 Pyruvate ferredoxin/flavodoxin oxidoreductase K18357 - 1.2.1.58 0.00000000000000000000000000000000000000000000000000000000000000000000000001205 255.0
BYD1_k127_6660381_5 LUD domain K00782 - - 0.00000000000000000000000000000000000000000000003127 187.0
BYD1_k127_6660381_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000004081 160.0
BYD1_k127_6660381_7 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00001756 47.0
BYD1_k127_6716910_0 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 3.65e-219 690.0
BYD1_k127_6716910_1 membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 287.0
BYD1_k127_6716910_2 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.000000000000000000000000000005237 128.0
BYD1_k127_6778972_0 TIGRFAM phosphate binding protein K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002033 502.0
BYD1_k127_6778972_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 439.0
BYD1_k127_6778972_2 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001751 400.0
BYD1_k127_6778972_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 293.0
BYD1_k127_6778972_4 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000004679 199.0
BYD1_k127_6778972_5 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000000000000007516 163.0
BYD1_k127_6778972_6 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000116 160.0
BYD1_k127_6778972_7 Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000001796 121.0
BYD1_k127_6829165_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.299e-256 796.0
BYD1_k127_6829165_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 1.091e-218 698.0
BYD1_k127_6829165_10 TPR repeat - - - 0.00000000000000000000000001607 115.0
BYD1_k127_6829165_11 helix_turn_helix, Lux Regulon - - - 0.000000001462 64.0
BYD1_k127_6829165_2 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008076 398.0
BYD1_k127_6829165_3 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003639 352.0
BYD1_k127_6829165_4 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009501 271.0
BYD1_k127_6829165_5 luxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000009286 258.0
BYD1_k127_6829165_6 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000004747 232.0
BYD1_k127_6829165_7 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000004706 169.0
BYD1_k127_6829165_8 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000002829 165.0
BYD1_k127_6829165_9 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000008641 127.0
BYD1_k127_6850628_0 Tripartite tricarboxylate transporter TctA family - - - 4.949e-217 683.0
BYD1_k127_6850628_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 546.0
BYD1_k127_6850628_10 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000114 126.0
BYD1_k127_6850628_11 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 0.0000000000000000000000001375 108.0
BYD1_k127_6850628_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 449.0
BYD1_k127_6850628_3 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001842 419.0
BYD1_k127_6850628_4 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 377.0
BYD1_k127_6850628_5 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 391.0
BYD1_k127_6850628_6 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 301.0
BYD1_k127_6850628_7 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000006056 250.0
BYD1_k127_6850628_8 [2Fe-2S] binding domain K00256,K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000007236 227.0
BYD1_k127_6850628_9 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000001784 215.0
BYD1_k127_6855992_0 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006052 376.0
BYD1_k127_6855992_1 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003197 338.0
BYD1_k127_6855992_2 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000000001353 242.0
BYD1_k127_6855992_3 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000001958 188.0
BYD1_k127_6855992_4 Aminoacyl-tRNA editing domain K19055 - - 0.0000000000000000000000000000000000000005685 154.0
BYD1_k127_6855992_5 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000001297 52.0
BYD1_k127_6861655_0 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008694 407.0
BYD1_k127_6861655_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 338.0
BYD1_k127_6861655_2 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002118 284.0
BYD1_k127_6861655_3 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001592 275.0
BYD1_k127_6861655_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000002236 222.0
BYD1_k127_6862552_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 358.0
BYD1_k127_6862552_1 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000000000000000000008441 201.0
BYD1_k127_6862552_2 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000004419 157.0
BYD1_k127_6862552_3 Thioredoxin K03671 - - 0.00000000000000000000000000000000000002057 147.0
BYD1_k127_6862552_4 Transglycosylase-like domain - - - 0.0000000988 61.0
BYD1_k127_6883368_0 catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-acp K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 1.791e-194 613.0
BYD1_k127_6883368_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002589 443.0
BYD1_k127_6883368_10 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000002402 208.0
BYD1_k127_6883368_11 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000000000000000000000000000003204 135.0
BYD1_k127_6883368_12 rieske 2fe-2s - - - 0.000000000000000000000000000000001134 135.0
BYD1_k127_6883368_13 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.0000000000000000000000006998 113.0
BYD1_k127_6883368_14 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000004658 102.0
BYD1_k127_6883368_15 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.000000000000000000000007517 107.0
BYD1_k127_6883368_16 Sigma E regulatory protein, MucB RseB K03598 - - 0.0001574 51.0
BYD1_k127_6883368_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 429.0
BYD1_k127_6883368_3 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 394.0
BYD1_k127_6883368_4 malonyl CoA-acyl carrier protein transacylase K00645,K15355 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 384.0
BYD1_k127_6883368_5 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007934 332.0
BYD1_k127_6883368_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 317.0
BYD1_k127_6883368_7 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.0000000000000000000000000000000000000000000000000000000000000000006671 233.0
BYD1_k127_6883368_8 S-adenosylmethionine-dependent methyltransferase, YraL family K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000342 229.0
BYD1_k127_6883368_9 HAD-superfamily hydrolase K01091 - 3.1.3.18 0.00000000000000000000000000000000000000000000000000000000000000009997 229.0
BYD1_k127_6888702_0 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000319 420.0
BYD1_k127_6888702_1 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000592 188.0
BYD1_k127_6888702_2 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000215 172.0
BYD1_k127_6888702_3 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000001051 139.0
BYD1_k127_6888702_4 Histidine kinase - - - 0.0003847 46.0
BYD1_k127_6908565_0 RQC K03654 - 3.6.4.12 3.083e-262 820.0
BYD1_k127_6908565_1 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 7.467e-216 684.0
BYD1_k127_6908565_10 Glycine zipper 2TM domain - - - 0.0000000000000000000000000006968 123.0
BYD1_k127_6908565_11 KTSC domain - - - 0.000000005089 63.0
BYD1_k127_6908565_2 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 1.015e-199 632.0
BYD1_k127_6908565_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 545.0
BYD1_k127_6908565_4 DNA polymerase III, epsilon subunit K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 407.0
BYD1_k127_6908565_5 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 332.0
BYD1_k127_6908565_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000412 266.0
BYD1_k127_6908565_7 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000001556 173.0
BYD1_k127_6908565_8 DNA repair - GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0032259,GO:0034641,GO:0036260,GO:0036261,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0071164,GO:0071704,GO:0090304,GO:0140098,GO:1901360 - 0.000000000000000000000000000000000000000006068 175.0
BYD1_k127_6908565_9 Cyclophilin-like K09143 - - 0.0000000000000000000000000000000001017 141.0
BYD1_k127_6925303_0 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 6.592e-280 873.0
BYD1_k127_6925303_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 1.067e-196 625.0
BYD1_k127_6925303_2 Transglutaminase-like superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000005945 243.0
BYD1_k127_6925303_3 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000000002951 169.0
BYD1_k127_6925303_4 OmpA-like transmembrane domain - - - 0.00000000000000000000000000006936 123.0
BYD1_k127_6925303_5 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000001774 90.0
BYD1_k127_6925303_6 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000003413 53.0
BYD1_k127_7039869_0 AcrB/AcrD/AcrF family K07787 - - 0.0 1562.0
BYD1_k127_7039869_1 Copper binding periplasmic protein CusF K07798,K15727 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 532.0
BYD1_k127_7039869_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008287 432.0
BYD1_k127_7039869_3 cellulose binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 336.0
BYD1_k127_7039869_4 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000001292 215.0
BYD1_k127_7039869_5 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533,K17686 - 3.6.3.4,3.6.3.54 0.0000000000000000000000000000000000000000000001113 171.0
BYD1_k127_7039869_6 Short C-terminal domain K08982 - - 0.00000000000000001193 85.0
BYD1_k127_7039869_7 Copper binding periplasmic protein CusF K07810 - - 0.00000000000000003004 89.0
BYD1_k127_7039869_8 copper chaperone K07213 - - 0.00000000001037 68.0
BYD1_k127_7039869_9 Transcriptional regulator K01768 - 4.6.1.1 0.00003049 54.0
BYD1_k127_7071173_0 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 374.0
BYD1_k127_7071173_1 Glutathione S-transferase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000001624 183.0
BYD1_k127_7071173_2 - - - - 0.000000003201 64.0
BYD1_k127_7114670_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007519 552.0
BYD1_k127_7114670_1 lipolytic protein G-D-S-L family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001219 297.0
BYD1_k127_7114670_2 Carbamoyltransferase K00612 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002348 271.0
BYD1_k127_7114670_3 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000000000000000000000002499 226.0
BYD1_k127_7114670_4 - - - - 0.0000000000000000000000000000000001437 142.0
BYD1_k127_7114670_5 - - - - 0.000000000000001424 77.0
BYD1_k127_7114670_6 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000002144 72.0
BYD1_k127_7126591_0 DEAD/H associated K03724 - - 0.0 1132.0
BYD1_k127_7126591_1 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1062.0
BYD1_k127_7126591_2 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 604.0
BYD1_k127_7126591_3 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 413.0
BYD1_k127_7126591_4 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 329.0
BYD1_k127_7126591_5 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009672 302.0
BYD1_k127_7126591_6 lytic transglycosylase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005425 288.0
BYD1_k127_7126591_7 FtsJ-like methyltransferase K02427 - 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000001594 220.0
BYD1_k127_7126591_8 glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000005378 198.0
BYD1_k127_7188364_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 6.133e-318 981.0
BYD1_k127_7188364_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 GO:0003674,GO:0003824,GO:0004801,GO:0016740,GO:0016744 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 434.0
BYD1_k127_7188364_2 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001089 282.0
BYD1_k127_7283330_0 PFAM Amylo-alpha-16-glucosidase - - - 5.272e-245 777.0
BYD1_k127_7283330_1 phosphoribosylamine-glycine ligase activity K01945,K01955 - 6.3.4.13,6.3.5.5 1.287e-207 652.0
BYD1_k127_7283330_10 ABC transporter substrate binding protein K01989 - - 0.0000000347 58.0
BYD1_k127_7283330_11 Immunity protein 32 - - - 0.0000009332 54.0
BYD1_k127_7283330_12 Virulence factor Mce family protein K02067 - - 0.0004037 52.0
BYD1_k127_7283330_2 PFAM glycosyl transferase group 1 K12995 - 2.4.1.348 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 458.0
BYD1_k127_7283330_3 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000000001228 223.0
BYD1_k127_7283330_4 SMART cyclic nucleotide-binding K10914 - - 0.00000000000000000000000000000000000000000000000000000000000007675 219.0
BYD1_k127_7283330_5 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000002672 171.0
BYD1_k127_7283330_6 Cold shock K03704 - - 0.000000000000000000000000000000000000003517 158.0
BYD1_k127_7283330_7 Tetratricopeptide repeat - - - 0.00000000000000000000000006753 121.0
BYD1_k127_7283330_8 ABC transporter - - - 0.0000000000000000006033 100.0
BYD1_k127_7283330_9 Domain of unknown function (DUF4184) - - - 0.00000000000000008123 91.0
BYD1_k127_7334360_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895,K01907 - 6.2.1.1,6.2.1.16 5.396e-290 903.0
BYD1_k127_7334360_1 Histidine ammonia-lyase K01745 - 4.3.1.3 1.872e-195 619.0
BYD1_k127_7334360_2 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000676 490.0
BYD1_k127_7334360_3 Amidohydrolase family K05603 - 3.5.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 443.0
BYD1_k127_7334360_4 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 344.0
BYD1_k127_7334360_5 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 293.0
BYD1_k127_7334360_6 Thioesterase superfamily K07107 - - 0.00000000000000000000000000000000000007309 145.0
BYD1_k127_7347839_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 9.404e-295 923.0
BYD1_k127_7347839_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 7.475e-220 707.0
BYD1_k127_7347839_10 PFAM Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005569 336.0
BYD1_k127_7347839_11 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 299.0
BYD1_k127_7347839_12 Amidase K02433 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004101 279.0
BYD1_k127_7347839_13 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000004303 264.0
BYD1_k127_7347839_14 Transcriptional regulator crp fnr family K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001049 255.0
BYD1_k127_7347839_15 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000001596 249.0
BYD1_k127_7347839_16 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000198 220.0
BYD1_k127_7347839_17 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000000000000000000000000000000000000000002153 220.0
BYD1_k127_7347839_18 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000001036 201.0
BYD1_k127_7347839_19 KR domain - - - 0.000000000000000000000000000000000000000000000000000004092 199.0
BYD1_k127_7347839_2 DNA replication, recombination, and repair K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 597.0
BYD1_k127_7347839_20 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000000000006749 192.0
BYD1_k127_7347839_21 Small MutS-related domain - - - 0.00000000000000000000000000000000000000000007416 166.0
BYD1_k127_7347839_22 BON domain - - - 0.0000000000000000000000000000000000000001569 165.0
BYD1_k127_7347839_23 HIRAN domain - - - 0.0000000000000000000000000000001828 132.0
BYD1_k127_7347839_24 Tetratricopeptide repeat - - - 0.0000000000000000000000000003431 123.0
BYD1_k127_7347839_25 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000021 113.0
BYD1_k127_7347839_26 nucleic acid phosphodiester bond hydrolysis K07460 - - 0.00000000000000000000000003491 120.0
BYD1_k127_7347839_27 - - - - 0.000000000000000001988 93.0
BYD1_k127_7347839_28 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.00000000000000002217 91.0
BYD1_k127_7347839_29 Diguanylate cyclase - - - 0.000000004019 64.0
BYD1_k127_7347839_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 520.0
BYD1_k127_7347839_31 - - - - 0.0005298 45.0
BYD1_k127_7347839_4 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 492.0
BYD1_k127_7347839_5 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 485.0
BYD1_k127_7347839_6 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004201 487.0
BYD1_k127_7347839_7 ABC-type Fe3 transport system, permease component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000952 467.0
BYD1_k127_7347839_8 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003031 463.0
BYD1_k127_7347839_9 Peptidogalycan biosysnthesis/recognition K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000194 419.0
BYD1_k127_7354281_0 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 1.137e-220 695.0
BYD1_k127_7354281_1 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 440.0
BYD1_k127_7354281_2 PFAM Sulfatase K01130 - 3.1.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001237 402.0
BYD1_k127_7354281_3 Domain of unknown function (DUF1992) - - - 0.0000000000000000002375 100.0
BYD1_k127_7368951_0 UDP binding domain K02474 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 607.0
BYD1_k127_7368951_1 Heparinase II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 550.0
BYD1_k127_7368951_10 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.000000000000000000000004629 119.0
BYD1_k127_7368951_2 PFAM CheR methyltransferase, SAM binding domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008306 528.0
BYD1_k127_7368951_3 epimerase dehydratase K02473,K08679 - 5.1.3.6,5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 387.0
BYD1_k127_7368951_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 297.0
BYD1_k127_7368951_5 PFAM CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000002882 263.0
BYD1_k127_7368951_6 Glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000001884 250.0
BYD1_k127_7368951_7 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000002152 240.0
BYD1_k127_7368951_8 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000001272 224.0
BYD1_k127_7368951_9 O-Antigen ligase - - - 0.000000000000000000000000000000001004 139.0
BYD1_k127_7378941_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1075.0
BYD1_k127_7378941_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 522.0
BYD1_k127_7378941_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 459.0
BYD1_k127_7378941_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 461.0
BYD1_k127_7378941_4 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 417.0
BYD1_k127_7378941_5 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 393.0
BYD1_k127_7378941_6 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000009849 243.0
BYD1_k127_7391462_0 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001769 586.0
BYD1_k127_7391462_1 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 566.0
BYD1_k127_7391462_10 PFAM SMP-30 Gluconolaconase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002958 289.0
BYD1_k127_7391462_11 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000341 267.0
BYD1_k127_7391462_12 alpha beta K07100 - - 0.000000000000000000000000000000000000000000000000000000000146 226.0
BYD1_k127_7391462_13 Cytochrome c mono- and diheme variants - - - 0.00000000000000000000000000000000000000000000000000000005114 199.0
BYD1_k127_7391462_14 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000003103 197.0
BYD1_k127_7391462_15 YCII-related domain - - - 0.0000000000000000000000000000000000000000000000000000543 194.0
BYD1_k127_7391462_16 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000005754 187.0
BYD1_k127_7391462_17 YCII-related domain - - - 0.0000000000000000000000000000000000000000000003782 173.0
BYD1_k127_7391462_18 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000001257 163.0
BYD1_k127_7391462_19 nuclease K01174 - 3.1.31.1 0.00000000000000000000000000000000000516 142.0
BYD1_k127_7391462_2 Sigma-70 region 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000882 517.0
BYD1_k127_7391462_20 serine threonine protein kinase - - - 0.00000000000000000000000000001948 123.0
BYD1_k127_7391462_21 Protein of unknown function (DUF2905) - - - 0.0000000000000000000006976 96.0
BYD1_k127_7391462_22 methyltransferase activity - - - 0.000000000000002283 87.0
BYD1_k127_7391462_23 Diguanylate cyclase - - - 0.0000000000001285 80.0
BYD1_k127_7391462_25 helix_turn_helix multiple antibiotic resistance protein - - - 0.000001076 56.0
BYD1_k127_7391462_3 belongs to the bacterial solute-binding protein 3 family K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 464.0
BYD1_k127_7391462_4 polar amino acid transport system K02028 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 418.0
BYD1_k127_7391462_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 411.0
BYD1_k127_7391462_6 histidine kinase HAMP region domain protein K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004382 416.0
BYD1_k127_7391462_7 response regulator K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 356.0
BYD1_k127_7391462_8 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 350.0
BYD1_k127_7391462_9 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 347.0
BYD1_k127_7401302_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 320.0
BYD1_k127_7401302_1 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 302.0
BYD1_k127_7401302_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000009088 246.0
BYD1_k127_7401302_3 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000001082 220.0
BYD1_k127_7401302_4 Serine aminopeptidase, S33 K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000005565 190.0
BYD1_k127_7429340_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 389.0
BYD1_k127_7429340_1 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 381.0
BYD1_k127_7429340_10 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000000000000000000000003887 169.0
BYD1_k127_7429340_11 Phosphoribosyl-ATP K01523 - 3.6.1.31 0.000000000000000000000000000000000002677 139.0
BYD1_k127_7429340_12 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000003487 132.0
BYD1_k127_7429340_13 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000000002707 119.0
BYD1_k127_7429340_14 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000003261 103.0
BYD1_k127_7429340_15 MltA specific insert domain K08304 - - 0.000000003721 57.0
BYD1_k127_7429340_2 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005646 378.0
BYD1_k127_7429340_3 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 351.0
BYD1_k127_7429340_4 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 332.0
BYD1_k127_7429340_5 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 314.0
BYD1_k127_7429340_6 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006178 280.0
BYD1_k127_7429340_7 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003614 275.0
BYD1_k127_7429340_8 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000000000105 200.0
BYD1_k127_7429340_9 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000002103 199.0
BYD1_k127_7448228_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 5.82e-251 790.0
BYD1_k127_7448228_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.916e-206 651.0
BYD1_k127_7448228_10 - - - - 0.00000000000000000001717 101.0
BYD1_k127_7448228_2 Rod shape-determining protein MreB K03569 - - 1.653e-202 633.0
BYD1_k127_7448228_3 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005262 601.0
BYD1_k127_7448228_4 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 454.0
BYD1_k127_7448228_5 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007147 354.0
BYD1_k127_7448228_6 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 344.0
BYD1_k127_7448228_7 Involved in formation and maintenance of cell shape K03570 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003669 288.0
BYD1_k127_7448228_8 rod shape-determining protein MreD K03571 - - 0.0000000000000000000000000000000000000000002247 164.0
BYD1_k127_7448228_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000002347 115.0
BYD1_k127_7487332_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1154.0
BYD1_k127_7487332_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0 1055.0
BYD1_k127_7487332_10 cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000004334 171.0
BYD1_k127_7487332_11 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000812 162.0
BYD1_k127_7487332_12 sulfur oxidation protein (SoxY) K17226 - - 0.000000000000000000000000000000000000000001051 167.0
BYD1_k127_7487332_13 Sulphur oxidation protein SoxZ - - - 0.0000000000000000000000000000000000000004241 154.0
BYD1_k127_7487332_14 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000001691 120.0
BYD1_k127_7487332_15 CRS1_YhbY K07574 - - 0.0000000000000000005488 89.0
BYD1_k127_7487332_2 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 8.277e-217 682.0
BYD1_k127_7487332_3 PFAM Aldehyde dehydrogenase K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 5.658e-195 624.0
BYD1_k127_7487332_4 DEAD DEAH box helicase K03724 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 379.0
BYD1_k127_7487332_5 KR domain K00038 - 1.1.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 377.0
BYD1_k127_7487332_6 COG0404 Glycine cleavage system T protein (aminomethyltransferase) K00605 - 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 361.0
BYD1_k127_7487332_7 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 299.0
BYD1_k127_7487332_8 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007161 258.0
BYD1_k127_7487332_9 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000002639 252.0
BYD1_k127_7492864_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 3.078e-302 962.0
BYD1_k127_7492864_1 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 2.481e-234 731.0
BYD1_k127_7492864_10 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000002697 226.0
BYD1_k127_7492864_11 LysR substrate binding domain K10972 - - 0.0000000000000000000000000000000000000000000000000000000000004306 223.0
BYD1_k127_7492864_12 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.00000000000000000000000000000000000000000000000000000001465 214.0
BYD1_k127_7492864_13 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.000000000000000000000000000000000000000000000000002717 188.0
BYD1_k127_7492864_14 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000002008 181.0
BYD1_k127_7492864_15 Belongs to the ompA family K03286 - - 0.0000000000000000000000002766 114.0
BYD1_k127_7492864_2 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 5.534e-211 664.0
BYD1_k127_7492864_3 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002928 522.0
BYD1_k127_7492864_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 442.0
BYD1_k127_7492864_5 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 390.0
BYD1_k127_7492864_6 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 351.0
BYD1_k127_7492864_7 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003811 293.0
BYD1_k127_7492864_8 Bacterial regulatory helix-turn-helix protein, lysR family K21703 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000181 283.0
BYD1_k127_7492864_9 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.00000000000000000000000000000000000000000000000000000000000000000001058 234.0
BYD1_k127_751450_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 2.539e-206 658.0
BYD1_k127_751450_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008664 539.0
BYD1_k127_751450_10 Deoxynucleoside kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001937 276.0
BYD1_k127_751450_11 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000137 265.0
BYD1_k127_751450_12 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000001086 226.0
BYD1_k127_751450_13 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000001651 216.0
BYD1_k127_751450_14 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000003737 194.0
BYD1_k127_751450_15 TIGRFAM DnaA regulatory inactivator Hda K10763 - - 0.00000000000000000000000000000000000000000000000000369 188.0
BYD1_k127_751450_16 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000001315 173.0
BYD1_k127_751450_17 Preprotein translocase subunit K03210 - - 0.00000000000000000000000000000000001912 143.0
BYD1_k127_751450_18 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000007014 115.0
BYD1_k127_751450_19 protein conserved in bacteria K09922 - - 0.0000008032 55.0
BYD1_k127_751450_2 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 524.0
BYD1_k127_751450_20 - - - - 0.000005548 51.0
BYD1_k127_751450_3 Histidine Phosphotransfer domain K10715 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 529.0
BYD1_k127_751450_4 AIR synthase related protein domain protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006018 465.0
BYD1_k127_751450_5 HD domain K13815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 417.0
BYD1_k127_751450_6 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003066 384.0
BYD1_k127_751450_7 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007685 301.0
BYD1_k127_751450_8 Pfam Enoyl-CoA hydratase isomerase K13816 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000823 304.0
BYD1_k127_751450_9 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 294.0
BYD1_k127_7549501_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 2.009e-220 693.0
BYD1_k127_7549501_1 III protein, CoA-transferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 535.0
BYD1_k127_7549501_10 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007793 258.0
BYD1_k127_7549501_11 4,5-dihydroxyphthalate decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000002041 251.0
BYD1_k127_7549501_12 protocatechuate 3,4-dioxygenase, beta subunit K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000001008 205.0
BYD1_k127_7549501_13 Protein-S-isoprenylcysteine methyltransferase - - - 0.000000000000000000000000000000000000000000000000004594 184.0
BYD1_k127_7549501_14 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000005978 182.0
BYD1_k127_7549501_15 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000000001727 143.0
BYD1_k127_7549501_16 Auxin binding protein - - - 0.000000000000000000000000000000000003396 142.0
BYD1_k127_7549501_17 Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols K04099,K04101 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0008198,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0036238,GO:0042537,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.57,1.13.11.8 0.0000000000000000000000008789 107.0
BYD1_k127_7549501_18 protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.00000000000000001189 91.0
BYD1_k127_7549501_19 Belongs to the TPP enzyme family - - - 0.00000000001374 70.0
BYD1_k127_7549501_2 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 476.0
BYD1_k127_7549501_3 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 448.0
BYD1_k127_7549501_4 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005822 407.0
BYD1_k127_7549501_5 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 357.0
BYD1_k127_7549501_6 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 348.0
BYD1_k127_7549501_7 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 341.0
BYD1_k127_7549501_8 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009936 277.0
BYD1_k127_7549501_9 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000001416 272.0
BYD1_k127_7549513_0 PFAM Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 608.0
BYD1_k127_7549513_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 508.0
BYD1_k127_7549513_2 membrane-bound metal-dependent K07038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009409 321.0
BYD1_k127_7549513_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001069 284.0
BYD1_k127_7549513_4 COG0685 5,10-methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003929 279.0
BYD1_k127_7549513_5 RES domain - - - 0.0000000000000000000000000000000000000134 153.0
BYD1_k127_7549513_6 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000000000000001085 139.0
BYD1_k127_757267_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 543.0
BYD1_k127_757267_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 539.0
BYD1_k127_757267_10 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000000008466 189.0
BYD1_k127_757267_11 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000001942 190.0
BYD1_k127_757267_12 PFAM Cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000008606 181.0
BYD1_k127_757267_13 TonB C terminal K03646 - - 0.000000000000000000000000000000000001214 149.0
BYD1_k127_757267_14 Biopolymer transport protein ExbD TolR K03560 - - 0.00000000000000000000000000000002261 132.0
BYD1_k127_757267_15 PFAM thioesterase superfamily protein K07107 - - 0.000000000000000000000000000003459 125.0
BYD1_k127_757267_16 Alpha/beta hydrolase family K00641 - 2.3.1.31 0.00000000000000000000000000005204 117.0
BYD1_k127_757267_17 EamA-like transporter family - - - 0.00000000000000000000000003608 120.0
BYD1_k127_757267_18 OmpA-like transmembrane domain - - - 0.00000000000000000004952 98.0
BYD1_k127_757267_19 helix_turn_helix, Lux Regulon K14979 - - 0.0000000000000000002886 91.0
BYD1_k127_757267_2 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 447.0
BYD1_k127_757267_20 OmpA-like transmembrane domain - - - 0.00000000000002141 79.0
BYD1_k127_757267_21 - - - - 0.000009839 48.0
BYD1_k127_757267_3 HD domain K07814,K13815 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004916 381.0
BYD1_k127_757267_4 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 362.0
BYD1_k127_757267_5 Adenylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 380.0
BYD1_k127_757267_6 PFAM MotA TolQ ExbB proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002421 313.0
BYD1_k127_757267_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007754 265.0
BYD1_k127_757267_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000001705 238.0
BYD1_k127_757267_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000005267 229.0
BYD1_k127_7582518_0 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 3.097e-255 807.0
BYD1_k127_7582518_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 4.72e-221 691.0
BYD1_k127_7582518_2 Aldehyde oxidase and xanthine dehydrogenase K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 518.0
BYD1_k127_7582518_3 amino acid K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004587 505.0
BYD1_k127_7582518_4 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 477.0
BYD1_k127_7582518_5 Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 393.0
BYD1_k127_7582518_6 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008918 312.0
BYD1_k127_7582518_7 Uncharacterized protein family, UPF0114 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000055 271.0
BYD1_k127_7582518_8 Haem-degrading - - - 0.000000000000000000000000000000000000000000000000000000000000000000001603 251.0
BYD1_k127_7582518_9 aminopeptidase activity K18028 - 1.13.11.9 0.0000000000000000000000000000000000000000000000000000000000000000004848 241.0
BYD1_k127_7586539_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1668.0
BYD1_k127_7586539_1 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002335 533.0
BYD1_k127_7586539_2 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 468.0
BYD1_k127_7586539_3 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000002473 219.0
BYD1_k127_7586539_4 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000003504 220.0
BYD1_k127_7586539_5 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0005575,GO:0005618,GO:0005623,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030312,GO:0030554,GO:0031333,GO:0032271,GO:0032272,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0040007,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043254,GO:0044087,GO:0044238,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051301,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 0.00000001457 59.0
BYD1_k127_7586539_6 - - - - 0.0001191 50.0
BYD1_k127_7591018_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 1.906e-224 714.0
BYD1_k127_7591018_1 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.00000000000000000000000000000000000000000000000000000000000000000001019 246.0
BYD1_k127_7615127_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1416.0
BYD1_k127_7615127_1 KaiC K08482 - - 9.83e-208 655.0
BYD1_k127_7615127_10 - - - - 0.0000000000000000000000000000000000000000000000000000004295 203.0
BYD1_k127_7615127_11 response to abiotic stimulus K06867 - - 0.000000000000000000000000000000000000000000000000145 186.0
BYD1_k127_7615127_12 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000006105 145.0
BYD1_k127_7615127_13 Helix-turn-helix domain, rpiR family - - - 0.000000000000000000000000000000000009452 147.0
BYD1_k127_7615127_14 Domain of unknown function (DUF4387) - - - 0.0000000000000000000000000000000001708 145.0
BYD1_k127_7615127_15 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.00000000000000000000000000000002772 138.0
BYD1_k127_7615127_16 NMT1-like family - - - 0.0000000000000000000007339 111.0
BYD1_k127_7615127_17 cytochrome C peroxidase - - - 0.000000000002846 72.0
BYD1_k127_7615127_2 TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 537.0
BYD1_k127_7615127_3 metal-dependent hydrolase with the TIM-barrel fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 503.0
BYD1_k127_7615127_4 two-component system sensor protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006677 472.0
BYD1_k127_7615127_5 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 393.0
BYD1_k127_7615127_6 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001996 280.0
BYD1_k127_7615127_7 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005813 274.0
BYD1_k127_7615127_8 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000644 232.0
BYD1_k127_7615127_9 Pyridoxamine 5'-phosphate oxidase K00275 - 1.4.3.5 0.00000000000000000000000000000000000000000000000000000000001332 212.0
BYD1_k127_7622351_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1429.0
BYD1_k127_7622351_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 8.517e-299 927.0
BYD1_k127_7622351_2 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 9.074e-252 805.0
BYD1_k127_7622351_3 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 1.866e-240 759.0
BYD1_k127_7622351_4 trehalohydrolase K01236 - 3.2.1.141 1.363e-201 659.0
BYD1_k127_7622351_5 PFAM Conserved TM helix repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 294.0
BYD1_k127_7622351_6 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.000000003827 59.0
BYD1_k127_7631054_0 Protein conserved in bacteria - - - 7.803e-236 741.0
BYD1_k127_7631054_1 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 397.0
BYD1_k127_7631054_10 PrkA AAA domain K07180 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003544 264.0
BYD1_k127_7631054_11 MAPEG family - - - 0.000000000000000000000000000000000000004844 149.0
BYD1_k127_7631054_12 beta-keto acid cleavage enzyme - - - 0.000000000000000000000000985 104.0
BYD1_k127_7631054_14 - - - - 0.00000000000001803 78.0
BYD1_k127_7631054_2 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 392.0
BYD1_k127_7631054_3 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 372.0
BYD1_k127_7631054_4 Glutathione S-transferase, C-terminal domain K07393 - 1.8.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003525 366.0
BYD1_k127_7631054_5 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006962 336.0
BYD1_k127_7631054_6 MltA-interacting protein MipA K07274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 357.0
BYD1_k127_7631054_7 Transcriptional regulator, MarR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005594 334.0
BYD1_k127_7631054_8 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 303.0
BYD1_k127_7631054_9 Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001597 289.0
BYD1_k127_7651831_0 Multicopper oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003411 538.0
BYD1_k127_7651831_1 cellulose binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 335.0
BYD1_k127_7651831_2 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000502 248.0
BYD1_k127_7651831_3 Pfam SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000000000001855 231.0
BYD1_k127_7651831_4 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000001571 203.0
BYD1_k127_7651831_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000001043 174.0
BYD1_k127_7651831_6 Domain of Unknown Function (DUF326) - - - 0.000000000000000000000000000000000000000001518 159.0
BYD1_k127_7651831_7 - - - - 0.000000000000000000000000000000000001966 140.0
BYD1_k127_7651831_8 - - - - 0.0000000002079 64.0
BYD1_k127_7651831_9 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0004736 48.0
BYD1_k127_7830601_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 2.294e-214 674.0
BYD1_k127_7830601_1 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 528.0
BYD1_k127_7830601_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 514.0
BYD1_k127_7830601_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 332.0
BYD1_k127_7830601_4 Secondary thiamine-phosphate synthase enzyme - - - 0.00000000000000000000000000000000000000000000000000002793 190.0
BYD1_k127_7830601_5 PFAM MaoC like domain - - - 0.0000000000000000000000009756 115.0
BYD1_k127_7830601_6 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000002742 102.0
BYD1_k127_7832137_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 6.494e-235 736.0
BYD1_k127_7832137_1 Bifunctional enoyl-CoA hydratase phosphate acetyltransferase K00625 - 2.3.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 550.0
BYD1_k127_7832137_2 2 iron, 2 sulfur cluster binding K00266,K00528,K02823 - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000287 448.0
BYD1_k127_7832137_3 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000006867 206.0
BYD1_k127_7856157_0 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006196 540.0
BYD1_k127_7856157_1 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000001867 256.0
BYD1_k127_7856157_2 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000004248 249.0
BYD1_k127_7856157_3 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000005428 233.0
BYD1_k127_7856157_4 Bacterial extracellular solute-binding protein K22003 - 5.3.3.7 0.0000000000000000000000000000000004633 137.0
BYD1_k127_7866070_0 FAD binding domain K10676 - 1.14.13.20 6.585e-228 720.0
BYD1_k127_7866070_1 PFAM monooxygenase FAD-binding K05712 - 1.14.13.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008054 522.0
BYD1_k127_7866070_2 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 383.0
BYD1_k127_7866070_3 ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008777 374.0
BYD1_k127_7866070_4 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 371.0
BYD1_k127_7866070_5 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000007864 190.0
BYD1_k127_7866070_6 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000001039 153.0
BYD1_k127_7881099_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 595.0
BYD1_k127_7881099_1 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007011 280.0
BYD1_k127_7881099_2 alpha beta - - - 0.0000000000000000000009963 106.0
BYD1_k127_7881099_3 Glutathione S-transferase K00799 - 2.5.1.18 0.000107 49.0
BYD1_k127_7881502_0 Pyridine nucleotide-disulphide oxidoreductase - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005783,GO:0006915,GO:0008150,GO:0008219,GO:0009987,GO:0012501,GO:0012505,GO:0016020,GO:0019866,GO:0031090,GO:0031966,GO:0031967,GO:0031975,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0097194 - 7.932e-312 989.0
BYD1_k127_7881502_1 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 1.33e-303 950.0
BYD1_k127_7881502_10 PFAM blue (type 1) copper domain protein K00368 - 1.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003257 272.0
BYD1_k127_7881502_11 Tetrapyrrole (Corrin/Porphyrin) Methylases K02303 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000009289 260.0
BYD1_k127_7881502_12 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002454 263.0
BYD1_k127_7881502_13 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000001193 244.0
BYD1_k127_7881502_14 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000008164 242.0
BYD1_k127_7881502_15 LysR substrate binding domain K18900 - - 0.00000000000000000000000000000000000000000000000000000001244 212.0
BYD1_k127_7881502_16 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.00000000000000000000000000000000000000000000000000000001392 209.0
BYD1_k127_7881502_17 NnrU protein - - - 0.0000000000000000000000000000000000000000000000000000005314 199.0
BYD1_k127_7881502_18 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000001854 199.0
BYD1_k127_7881502_19 ANTAR K07183 - - 0.0000000000000000000000000000000000000000000000000113 186.0
BYD1_k127_7881502_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 1.107e-289 915.0
BYD1_k127_7881502_20 Thioesterase - - - 0.000000000000000000000000000000000001147 142.0
BYD1_k127_7881502_21 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000000002562 138.0
BYD1_k127_7881502_22 PFAM Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000005617 138.0
BYD1_k127_7881502_3 Nitrate ABC transporter K02051,K15576,K22067 - - 8.589e-203 637.0
BYD1_k127_7881502_4 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 533.0
BYD1_k127_7881502_5 Nitrate ABC transporter inner membrane subunit K15577 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 390.0
BYD1_k127_7881502_6 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 388.0
BYD1_k127_7881502_7 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 332.0
BYD1_k127_7881502_8 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008658 330.0
BYD1_k127_7881502_9 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005508 295.0
BYD1_k127_788699_0 Heat shock 70 kDa protein K04043 - - 3.361e-243 756.0
BYD1_k127_788699_1 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 494.0
BYD1_k127_788699_2 AsmA family K07289 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 386.0
BYD1_k127_788699_3 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000002834 155.0
BYD1_k127_7892483_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0 1118.0
BYD1_k127_7892483_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 585.0
BYD1_k127_7892483_10 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000000000968 190.0
BYD1_k127_7892483_11 regulatory protein GntR HTH - - - 0.0000000000000000000000000000000000000004474 158.0
BYD1_k127_7892483_12 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.000000000000000000000000000000005441 135.0
BYD1_k127_7892483_13 Catalyzes the transfer of an acetyl group from acetyl- CoA to the 6'-amino group of aminoglycoside molecules conferring resistance to antibiotics containing the purpurosamine ring K18816 - 2.3.1.82 0.00000000000000000000000000006312 119.0
BYD1_k127_7892483_15 - - - - 0.0002412 49.0
BYD1_k127_7892483_2 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 522.0
BYD1_k127_7892483_3 mannitol 2-dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 457.0
BYD1_k127_7892483_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 426.0
BYD1_k127_7892483_5 Amino acid polyamine organocation transporter, APC superfamily K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 415.0
BYD1_k127_7892483_6 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 413.0
BYD1_k127_7892483_7 LysR substrate binding domain protein K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 387.0
BYD1_k127_7892483_8 carbohydrate transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004556 263.0
BYD1_k127_7892483_9 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000003812 191.0
BYD1_k127_7919133_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.87e-212 683.0
BYD1_k127_7919133_1 Methionine synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 475.0
BYD1_k127_7919133_2 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004034 319.0
BYD1_k127_7919133_3 Universal stress protein family - - - 0.0000000000000000000003745 98.0
BYD1_k127_794674_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.186e-321 997.0
BYD1_k127_794674_1 Bacterial transcriptional activator domain - - - 1.935e-196 649.0
BYD1_k127_794674_10 Shikimate kinase K00851 - 2.7.1.12 0.0000000000000000000000000000000000000001283 166.0
BYD1_k127_794674_11 Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000002816 157.0
BYD1_k127_794674_12 - - - - 0.00000000000000000000000000001205 119.0
BYD1_k127_794674_13 oxidation-reduction process - - - 0.0000000000000000000000000002946 116.0
BYD1_k127_794674_14 - - - - 0.000000000000000000000000004534 117.0
BYD1_k127_794674_15 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000001021 101.0
BYD1_k127_794674_16 CHASE - - - 0.0000000000000003857 87.0
BYD1_k127_794674_17 helix_turn_helix, Lux Regulon K07684,K07693 - - 0.00000000008473 64.0
BYD1_k127_794674_18 protein conserved in bacteria - - - 0.000000001919 63.0
BYD1_k127_794674_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004581 537.0
BYD1_k127_794674_3 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007547 405.0
BYD1_k127_794674_4 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003573 344.0
BYD1_k127_794674_5 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 305.0
BYD1_k127_794674_6 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009827 310.0
BYD1_k127_794674_7 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002954 279.0
BYD1_k127_794674_8 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005314 274.0
BYD1_k127_794674_9 Adenosyltransferase K00798 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005525,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016043,GO:0016740,GO:0016765,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019003,GO:0019438,GO:0019538,GO:0022607,GO:0030091,GO:0030554,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032559,GO:0032561,GO:0033013,GO:0033014,GO:0034641,GO:0035639,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000001066 239.0
BYD1_k127_7985782_0 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 1.265e-195 619.0
BYD1_k127_7985782_1 PFAM Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 450.0
BYD1_k127_7985782_10 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000002973 163.0
BYD1_k127_7985782_11 PFAM ribosomal protein L31 K02909 - - 0.000000000000000000000000000005569 121.0
BYD1_k127_7985782_12 FIST_C - - - 0.0000000000000000000006833 95.0
BYD1_k127_7985782_13 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000445 93.0
BYD1_k127_7985782_14 - - - - 0.000000000003081 69.0
BYD1_k127_7985782_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 440.0
BYD1_k127_7985782_3 Belongs to the GPI family K01810 - 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 423.0
BYD1_k127_7985782_4 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 309.0
BYD1_k127_7985782_5 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 315.0
BYD1_k127_7985782_6 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001182 287.0
BYD1_k127_7985782_7 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001029 269.0
BYD1_k127_7985782_8 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000002757 218.0
BYD1_k127_7985782_9 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000001139 212.0
BYD1_k127_7989245_0 GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004308 525.0
BYD1_k127_7989245_1 Cobalamin-independent synthase, Catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009525 481.0
BYD1_k127_7989245_2 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004458 420.0
BYD1_k127_7989245_3 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K05712 - 1.14.13.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 417.0
BYD1_k127_7989245_4 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 396.0
BYD1_k127_7989245_5 Fumarylacetoacetate (FAA) hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 377.0
BYD1_k127_7989245_6 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 292.0
BYD1_k127_7989245_7 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001777 278.0
BYD1_k127_7989245_8 Belongs to the mandelate racemase muconate lactonizing enzyme family K20023 - 4.2.1.156,4.2.1.42 0.0000000000000000000000000000000000000000000000000000000005535 215.0
BYD1_k127_7989245_9 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000007529 224.0
BYD1_k127_8005058_0 Amidohydrolase K07045 - - 6.428e-212 666.0
BYD1_k127_8005058_1 Asp-tRNAAsn Glu-tRNAGln amidotransferase A subunit and related amidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 376.0
BYD1_k127_8005058_2 PKD domain - - - 0.000000000000000003151 94.0
BYD1_k127_8023409_0 Rieske [2Fe-2S] domain - - - 1.846e-203 640.0
BYD1_k127_8023409_1 Cupin domain K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 409.0
BYD1_k127_8023409_2 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 350.0
BYD1_k127_8023409_3 COG0410 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007563 312.0
BYD1_k127_8023409_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007132 299.0
BYD1_k127_8023409_5 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000009984 167.0
BYD1_k127_8056854_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.025e-199 630.0
BYD1_k127_8056854_1 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 583.0
BYD1_k127_8056854_2 protein-glutamate methylesterase activity K00575,K03412,K03413 - 2.1.1.80,3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005154 371.0
BYD1_k127_8056854_3 SPTR MCP methyltransferase, CheR-type with PAS PAC sensor K00575,K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000000001548 215.0
BYD1_k127_8056854_4 COGs COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase - - - 0.00000000000000000000000000000000000000000000000000000004009 204.0
BYD1_k127_8056854_5 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.00000000000000000000000000000000000000000000000004813 188.0
BYD1_k127_8056854_6 COG0438 Glycosyltransferase - - - 0.00000000000000000000000000000000000000000004424 175.0
BYD1_k127_8056854_7 Methyltransferase domain - - - 0.000000000000009091 87.0
BYD1_k127_8056854_8 GDSL-like Lipase/Acylhydrolase - - - 0.000004449 59.0
BYD1_k127_8073332_0 Putative serine dehydratase domain K18425 - 4.1.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 413.0
BYD1_k127_8073332_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006371 250.0
BYD1_k127_8073332_2 - - - - 0.0000000000000000000000000000000000000000000000000000000009659 209.0
BYD1_k127_8073332_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000008542 150.0
BYD1_k127_8073332_4 oxidation-reduction process - - - 0.0000000000000000000000001499 117.0
BYD1_k127_8089232_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 8.046e-242 769.0
BYD1_k127_8089232_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 7.686e-208 666.0
BYD1_k127_8089232_10 Protein of unknown function (DUF2938) - - - 0.00000000000000000000000000000000000000000000000000000000000000005562 226.0
BYD1_k127_8089232_11 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000001473 224.0
BYD1_k127_8089232_12 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000003367 191.0
BYD1_k127_8089232_13 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000002218 182.0
BYD1_k127_8089232_14 DoxX family K15977 - - 0.0000000000000000000000000000000000000000000006724 175.0
BYD1_k127_8089232_15 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000002731 168.0
BYD1_k127_8089232_16 Glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.0000000000000000000000000001873 121.0
BYD1_k127_8089232_17 Cupin domain K21700 - - 0.0000000000000000000000000001978 120.0
BYD1_k127_8089232_18 Protein of unknown function (DUF2798) - - - 0.00000000000000000000003907 108.0
BYD1_k127_8089232_19 SnoaL-like domain - - - 0.000000000000001683 86.0
BYD1_k127_8089232_2 Methionine synthase K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006835 475.0
BYD1_k127_8089232_20 - - - - 0.0000000004252 62.0
BYD1_k127_8089232_21 Glyoxalase-like domain K06996 - - 0.00001542 50.0
BYD1_k127_8089232_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 385.0
BYD1_k127_8089232_4 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 367.0
BYD1_k127_8089232_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003193 284.0
BYD1_k127_8089232_6 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000005901 272.0
BYD1_k127_8089232_7 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001004 252.0
BYD1_k127_8089232_8 MerR, DNA binding K13639 - - 0.0000000000000000000000000000000000000000000000000000000000000000008933 229.0
BYD1_k127_8089232_9 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000000009047 232.0
BYD1_k127_8152691_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.952e-244 767.0
BYD1_k127_8152691_1 COG2148 Sugar transferases involved in lipopolysaccharide synthesis K03606 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 500.0
BYD1_k127_8152691_10 - - - - 0.000000000000000004559 90.0
BYD1_k127_8152691_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 320.0
BYD1_k127_8152691_3 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001003 284.0
BYD1_k127_8152691_4 G-rich domain on putative tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000271 282.0
BYD1_k127_8152691_5 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000001022 241.0
BYD1_k127_8152691_6 Polysaccharide biosynthesis/export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000000000001119 220.0
BYD1_k127_8152691_7 SurA N-terminal domain - - - 0.000000000000000000000000000000000000000000000008443 186.0
BYD1_k127_8152691_8 phospholipase d K01115 - 3.1.4.4 0.000000000000000000000000000000000000000000009108 173.0
BYD1_k127_8152691_9 AI-2E family transporter - - - 0.00000000000000000000000006554 114.0
BYD1_k127_8176310_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005217 347.0
BYD1_k127_8176310_1 MmgE/PrpD family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003231 351.0
BYD1_k127_8176310_2 Amidohydrolase family K01464 - 3.5.2.2 0.00000000000000000000000000000000000000000000000000004796 191.0
BYD1_k127_8201859_0 SpoVR like protein K06415 - - 8.123e-204 642.0
BYD1_k127_8201859_1 Protein of unknown function (DUF444) K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 428.0
BYD1_k127_8201859_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 390.0
BYD1_k127_8201859_3 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 372.0
BYD1_k127_8201859_4 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006102 328.0
BYD1_k127_8201859_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000002654 211.0
BYD1_k127_8201859_6 PrkA AAA domain K07180 - - 0.0000000000000000000000000000000000000000000000000009679 184.0
BYD1_k127_8201859_7 - - - - 0.000001858 54.0
BYD1_k127_8201859_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000168 47.0
BYD1_k127_8262129_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 4.37e-251 781.0
BYD1_k127_8262129_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 3.916e-235 734.0
BYD1_k127_8262129_2 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000002704 243.0
BYD1_k127_8262129_3 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000001303 227.0
BYD1_k127_8262129_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000005751 153.0
BYD1_k127_8262129_5 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000002053 82.0
BYD1_k127_8262129_6 Domain of unknown function (DUF4124) - - - 0.000000002526 70.0
BYD1_k127_8275268_0 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 291.0
BYD1_k127_8275268_1 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001782 280.0
BYD1_k127_8275268_2 UPF0761 membrane protein K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000007386 232.0
BYD1_k127_8275268_3 PFAM YbaK prolyl-tRNA synthetase associated region - - - 0.000000000000000000000000000000000000000003819 159.0
BYD1_k127_8275268_4 Predicted membrane protein (DUF2069) - - - 0.0000000000000000000000006505 111.0
BYD1_k127_8275268_5 FKBP-type peptidyl-prolyl cis-trans isomerase - - - 0.000000001171 70.0
BYD1_k127_8301894_0 4Fe-4S dicluster domain - - - 0.0 1179.0
BYD1_k127_8301894_1 Belongs to the IlvD Edd family - - - 6.339e-276 856.0
BYD1_k127_8301894_10 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 460.0
BYD1_k127_8301894_11 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006211 436.0
BYD1_k127_8301894_12 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 428.0
BYD1_k127_8301894_13 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 394.0
BYD1_k127_8301894_14 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002604 392.0
BYD1_k127_8301894_15 Binding-protein-dependent transport system inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 382.0
BYD1_k127_8301894_16 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003048 353.0
BYD1_k127_8301894_17 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 362.0
BYD1_k127_8301894_18 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 348.0
BYD1_k127_8301894_19 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005161 306.0
BYD1_k127_8301894_2 Protein of unknown function, DUF255 K06888 - - 3.626e-247 782.0
BYD1_k127_8301894_20 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000000000002626 210.0
BYD1_k127_8301894_21 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000008679 188.0
BYD1_k127_8301894_22 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000002116 177.0
BYD1_k127_8301894_23 AzlC protein - - - 0.000000000000000000000000000000000000000002219 163.0
BYD1_k127_8301894_24 protein involved in tolerance to divalent cations K03926 - - 0.00000000000000000000000000000000000000001179 155.0
BYD1_k127_8301894_25 PFAM cytochrome c, class I - - - 0.0000000000000000000000000004282 121.0
BYD1_k127_8301894_26 Cytochrome c K08738 - - 0.000000000000000000000000000712 121.0
BYD1_k127_8301894_27 - - - - 0.00000000000000000003706 96.0
BYD1_k127_8301894_28 Branched-chain amino acid transport protein (AzlD) - - - 0.000000000000000001569 91.0
BYD1_k127_8301894_3 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 600.0
BYD1_k127_8301894_4 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 573.0
BYD1_k127_8301894_5 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004173 554.0
BYD1_k127_8301894_6 CoA-transferase family III K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002157 522.0
BYD1_k127_8301894_7 Belongs to the ALAD family K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 500.0
BYD1_k127_8301894_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003978 487.0
BYD1_k127_8301894_9 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 466.0
BYD1_k127_8321848_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 2.01e-245 764.0
BYD1_k127_8321848_1 enoyl-CoA hydratase K15513 - 4.1.2.44 8.009e-227 718.0
BYD1_k127_8321848_10 Twin-arginine translocation pathway signal sequence - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006143 431.0
BYD1_k127_8321848_11 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 396.0
BYD1_k127_8321848_12 Succinylglutamate desuccinylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 352.0
BYD1_k127_8321848_13 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 341.0
BYD1_k127_8321848_14 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 293.0
BYD1_k127_8321848_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 288.0
BYD1_k127_8321848_16 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007359 287.0
BYD1_k127_8321848_17 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004509 259.0
BYD1_k127_8321848_18 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000002196 262.0
BYD1_k127_8321848_19 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002185 243.0
BYD1_k127_8321848_2 AMP-binding enzyme K12508 - 6.2.1.34 8.154e-222 710.0
BYD1_k127_8321848_20 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000163 238.0
BYD1_k127_8321848_21 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000004379 218.0
BYD1_k127_8321848_22 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000004802 230.0
BYD1_k127_8321848_23 - K11477 - - 0.00000000000000000000000000000000000000000000000000005283 190.0
BYD1_k127_8321848_24 Flavodoxin - - - 0.000000000000000000000000000000000000000000000000009445 184.0
BYD1_k127_8321848_25 - - - - 0.0000000000000000000000000000000000000000157 161.0
BYD1_k127_8321848_26 EamA-like transporter family - - - 0.000000000000000000000000000000000000003633 157.0
BYD1_k127_8321848_27 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000009102 149.0
BYD1_k127_8321848_28 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000001866 143.0
BYD1_k127_8321848_29 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000000001448 109.0
BYD1_k127_8321848_3 ABC-type dipeptide transport system periplasmic component K02035 - - 3.612e-219 691.0
BYD1_k127_8321848_30 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.000000000000000000003828 102.0
BYD1_k127_8321848_31 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000002234 85.0
BYD1_k127_8321848_32 - - - - 0.00000000000001318 75.0
BYD1_k127_8321848_33 2-Nitropropane dioxygenase - - - 0.0000000002504 70.0
BYD1_k127_8321848_34 Helix-turn-helix XRE-family like proteins - - - 0.00000000146 68.0
BYD1_k127_8321848_35 - - - - 0.0001219 48.0
BYD1_k127_8321848_4 AsmA family K07289,K07290 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 531.0
BYD1_k127_8321848_5 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 491.0
BYD1_k127_8321848_6 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000645 484.0
BYD1_k127_8321848_7 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006088 472.0
BYD1_k127_8321848_8 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007628 462.0
BYD1_k127_8321848_9 COG0601 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 426.0
BYD1_k127_8361870_0 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 557.0
BYD1_k127_8361870_1 alpha/beta hydrolase fold K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 525.0
BYD1_k127_8361870_10 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002367 235.0
BYD1_k127_8361870_11 DSBA-like thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000007476 195.0
BYD1_k127_8361870_12 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000000001502 184.0
BYD1_k127_8361870_13 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0000000000000000000000000000000000000000000000003564 180.0
BYD1_k127_8361870_14 carbon monoxide dehydrogenase K09386 - - 0.0000000000000000000000000000000000000000000000004599 182.0
BYD1_k127_8361870_15 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000007054 151.0
BYD1_k127_8361870_16 but contains a N-term CheY-like response regulator receiver domain and C-term adenylyl guanylyl cyclase catalytic domain - - - 0.0000000000004512 77.0
BYD1_k127_8361870_17 ABC transporter substrate binding protein K01989 - - 0.00003692 49.0
BYD1_k127_8361870_2 AAA domain (dynein-related subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005104 444.0
BYD1_k127_8361870_3 VWA domain containing CoxE-like protein K07161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 428.0
BYD1_k127_8361870_4 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 416.0
BYD1_k127_8361870_5 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001849 422.0
BYD1_k127_8361870_6 molybdenum cofactor K03831 - 2.7.7.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004468 291.0
BYD1_k127_8361870_7 Threonyl and Alanyl tRNA synthetase second additional domain K07050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002298 258.0
BYD1_k127_8361870_8 Carboxylesterase K06999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002782 258.0
BYD1_k127_8361870_9 Protein kinase domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000001265 241.0
BYD1_k127_8402855_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 368.0
BYD1_k127_8402855_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001747 246.0
BYD1_k127_8402855_2 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000005439 129.0
BYD1_k127_8402855_3 - - - - 0.000000000000000000000000003116 115.0
BYD1_k127_8419018_0 Acyl-CoA dehydrogenase N terminal K20035 - - 3.052e-227 717.0
BYD1_k127_8419018_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001844 521.0
BYD1_k127_8419018_2 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 450.0
BYD1_k127_8419018_3 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 419.0
BYD1_k127_8419018_4 MscS Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 435.0
BYD1_k127_8419018_5 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 316.0
BYD1_k127_8419018_6 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000005605 154.0
BYD1_k127_8419018_7 Histidine kinase A domain protein - - - 0.000000000000000000000000004075 116.0
BYD1_k127_8419018_8 PAS fold K02484 - 2.7.13.3 0.0000000000000001058 91.0
BYD1_k127_8458067_0 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 385.0
BYD1_k127_8458067_1 Trypsin-like peptidase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 360.0
BYD1_k127_8458067_2 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 312.0
BYD1_k127_8458067_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006569 279.0
BYD1_k127_8458067_4 COG1943 Transposase and inactivated derivatives K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007286 243.0
BYD1_k127_8458067_5 Twin-arginine translocation pathway signal protein - - - 0.0000000000000000000000000000000000000000000000000000000008006 221.0
BYD1_k127_8488028_0 4,5-dihydroxyphthalate decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003672 467.0
BYD1_k127_8488028_1 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006501 282.0
BYD1_k127_8488028_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005222 280.0
BYD1_k127_8488028_3 Oxidoreductase family, C-terminal alpha/beta domain K18067 - 1.3.1.64 0.0000000000000000000000000000000000000000000000000000000000000000002303 235.0
BYD1_k127_8488028_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000009621 173.0
BYD1_k127_8562215_0 Putative diguanylate phosphodiesterase - - - 6.674e-195 650.0
BYD1_k127_8562215_1 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005996 516.0
BYD1_k127_8562215_2 Putative cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001884 296.0
BYD1_k127_8562215_3 PFAM oxidoreductase FAD NAD(P)-binding domain protein K00528 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001284 261.0
BYD1_k127_8562215_4 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000004937 231.0
BYD1_k127_8562215_5 KR domain K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000819 213.0
BYD1_k127_8562215_6 Tetratricopeptide repeat - - - 0.00000000000000000000000000002516 127.0
BYD1_k127_8562215_7 - - - - 0.000000000000000000000000007839 121.0
BYD1_k127_8562215_8 Protein of unknown function (DUF3301) - - - 0.00000000000000000000001061 103.0
BYD1_k127_8567347_0 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007335 382.0
BYD1_k127_8567347_1 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008136 357.0
BYD1_k127_8567347_10 Domain of unknown function (DUF4112) - - - 0.0000000000000000000000000000000000000001149 156.0
BYD1_k127_8567347_11 Protein of unknown function (DUF3750) - - - 0.000000000000000000000000000000000001092 148.0
BYD1_k127_8567347_2 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 332.0
BYD1_k127_8567347_3 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009862 320.0
BYD1_k127_8567347_4 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004374 299.0
BYD1_k127_8567347_5 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001568 282.0
BYD1_k127_8567347_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004236 273.0
BYD1_k127_8567347_7 asparaginase K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001918 283.0
BYD1_k127_8567347_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000933 258.0
BYD1_k127_8567347_9 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000001106 241.0
BYD1_k127_8589323_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 1.559e-217 698.0
BYD1_k127_8589323_1 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 1.943e-212 673.0
BYD1_k127_8589323_10 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 488.0
BYD1_k127_8589323_11 phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 463.0
BYD1_k127_8589323_12 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 456.0
BYD1_k127_8589323_13 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 460.0
BYD1_k127_8589323_14 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 439.0
BYD1_k127_8589323_15 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004887 435.0
BYD1_k127_8589323_16 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 409.0
BYD1_k127_8589323_17 Transporter associated domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002737 379.0
BYD1_k127_8589323_18 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 370.0
BYD1_k127_8589323_19 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 354.0
BYD1_k127_8589323_2 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 4.279e-201 636.0
BYD1_k127_8589323_20 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006706 347.0
BYD1_k127_8589323_21 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001216 284.0
BYD1_k127_8589323_22 enzyme of heme biosynthesis K02496,K13543 - 2.1.1.107,4.2.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006825 282.0
BYD1_k127_8589323_23 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001111 271.0
BYD1_k127_8589323_24 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004316 269.0
BYD1_k127_8589323_25 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001571 272.0
BYD1_k127_8589323_26 enzyme of heme biosynthesis K02498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002147 273.0
BYD1_k127_8589323_27 alginate biosynthesis protein AlgZ FimS K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002581 267.0
BYD1_k127_8589323_28 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000000004779 260.0
BYD1_k127_8589323_29 Nucleotidyl transferase K00992 - 2.7.7.99 0.0000000000000000000000000000000000000000000000000000000000000000000000156 253.0
BYD1_k127_8589323_3 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.583e-200 636.0
BYD1_k127_8589323_30 FAD binding domain K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000008424 243.0
BYD1_k127_8589323_31 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000004244 235.0
BYD1_k127_8589323_32 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000001203 238.0
BYD1_k127_8589323_33 regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000503 222.0
BYD1_k127_8589323_34 Required for insertion of 4Fe-4S clusters K15724 - - 0.00000000000000000000000000000000000000000000000000000000000001056 216.0
BYD1_k127_8589323_35 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000001602 215.0
BYD1_k127_8589323_36 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000002628 211.0
BYD1_k127_8589323_37 synthase K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000000000000003062 201.0
BYD1_k127_8589323_38 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 - 4.4.1.5 0.000000000000000000000000000000000000000000000000002911 186.0
BYD1_k127_8589323_39 - - - - 0.000000000000000000000000000000000000000000000006479 184.0
BYD1_k127_8589323_4 Belongs to the GARS family K01945 - 6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 606.0
BYD1_k127_8589323_40 Glutaredoxin K07390 - - 0.0000000000000000000000000000000000000000000001676 169.0
BYD1_k127_8589323_41 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000000005179 169.0
BYD1_k127_8589323_42 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000000000000008463 168.0
BYD1_k127_8589323_43 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000001673 139.0
BYD1_k127_8589323_44 Belongs to the transcriptional regulatory Fis family K03557 - - 0.0000000000000000000003872 97.0
BYD1_k127_8589323_45 Metallo-beta-lactamase superfamily - - - 0.00000000000000000003633 98.0
BYD1_k127_8589323_46 - - - - 0.000000000003541 76.0
BYD1_k127_8589323_5 Belongs to the peptidase M24B family K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 607.0
BYD1_k127_8589323_6 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006439 550.0
BYD1_k127_8589323_7 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 567.0
BYD1_k127_8589323_8 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004297 509.0
BYD1_k127_8589323_9 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 499.0
BYD1_k127_8605190_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1411.0
BYD1_k127_8605190_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.375e-259 813.0
BYD1_k127_8605190_10 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004376 276.0
BYD1_k127_8605190_11 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001921 263.0
BYD1_k127_8605190_12 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005584 253.0
BYD1_k127_8605190_13 PFAM N-acetylmuramoyl-L-alanine amidase K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000001488 229.0
BYD1_k127_8605190_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000000007841 189.0
BYD1_k127_8605190_15 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000002353 146.0
BYD1_k127_8605190_16 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.0000000000000000000000000000000006569 131.0
BYD1_k127_8605190_17 Lytic murein transglycosylase K08305 - - 0.0000000008953 68.0
BYD1_k127_8605190_18 - K06950 - - 0.0000005681 59.0
BYD1_k127_8605190_19 EamA-like transporter family - - - 0.00008243 56.0
BYD1_k127_8605190_2 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 590.0
BYD1_k127_8605190_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 532.0
BYD1_k127_8605190_4 PFAM sigma-54 factor interaction domain-containing protein K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 510.0
BYD1_k127_8605190_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 443.0
BYD1_k127_8605190_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009107 390.0
BYD1_k127_8605190_7 ATPase histidine kinase DNA gyrase B HSP90 domain protein K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 383.0
BYD1_k127_8605190_8 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001789 276.0
BYD1_k127_8605190_9 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002687 272.0
BYD1_k127_8685034_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.527e-278 869.0
BYD1_k127_8685034_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006391 562.0
BYD1_k127_8685034_2 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001922 276.0
BYD1_k127_8685034_3 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005442 262.0
BYD1_k127_8685034_4 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000001007 209.0
BYD1_k127_8685034_5 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000001782 174.0
BYD1_k127_8685034_6 Transcriptional regulator - - - 0.00000000000000007327 87.0
BYD1_k127_8698237_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0 1372.0
BYD1_k127_8698237_1 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 1.188e-291 909.0
BYD1_k127_8698237_10 Participates in the degradation of poly-3- hydroxybutyrate (PHB). It works downstream of poly(3- hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB-oligomers) into 3HB-monomers K07518 - 3.1.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 462.0
BYD1_k127_8698237_11 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 395.0
BYD1_k127_8698237_12 exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 368.0
BYD1_k127_8698237_13 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 344.0
BYD1_k127_8698237_14 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007823 303.0
BYD1_k127_8698237_15 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008278 299.0
BYD1_k127_8698237_16 RNA methyltransferase K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000000002046 226.0
BYD1_k127_8698237_17 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000005999 219.0
BYD1_k127_8698237_18 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.0000000000000000000000000000000000000000000000000002967 197.0
BYD1_k127_8698237_19 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000000009418 160.0
BYD1_k127_8698237_2 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain K00382 - 1.8.1.4 2.495e-265 826.0
BYD1_k127_8698237_20 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000001159 118.0
BYD1_k127_8698237_21 Domain of unknown function (DUF2382) - - - 0.00000000000000000000271 98.0
BYD1_k127_8698237_22 - - - - 0.00000000000000001283 87.0
BYD1_k127_8698237_3 Belongs to the malate synthase family K01638 - 2.3.3.9 4.805e-239 750.0
BYD1_k127_8698237_4 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 1.495e-215 677.0
BYD1_k127_8698237_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 1.168e-200 644.0
BYD1_k127_8698237_6 TIGRFAM glutamine synthetase, type I K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004927 588.0
BYD1_k127_8698237_7 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 554.0
BYD1_k127_8698237_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 494.0
BYD1_k127_8698237_9 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 452.0
BYD1_k127_875087_0 Short-chain dehydrogenase reductase sdr - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000929 430.0
BYD1_k127_875087_1 PFAM cyclase family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003719 428.0
BYD1_k127_875087_2 flavin adenine dinucleotide binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 289.0
BYD1_k127_875087_3 Tautomerase enzyme - - - 0.0001499 45.0
BYD1_k127_8755557_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 571.0
BYD1_k127_8755557_1 SMART Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000159 275.0
BYD1_k127_8755557_2 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000004018 221.0
BYD1_k127_8755557_3 COG2140 Thermophilic glucose-6-phosphate isomerase and related metalloenzymes - - - 0.00000000000000000000000000000000000000005547 155.0
BYD1_k127_8755557_4 Predicted membrane protein (DUF2214) K08983 - - 0.00000000000001752 76.0
BYD1_k127_8755557_5 Cell wall-active antibiotics response 4TMS YvqF K11622 - - 0.0000299 48.0
BYD1_k127_8774474_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 1.013e-211 685.0
BYD1_k127_8774474_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 380.0
BYD1_k127_8774474_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000429 97.0
BYD1_k127_8774474_11 Type II transport protein GspH K08084 - - 0.000000000000005819 81.0
BYD1_k127_8774474_12 Pilus assembly protein PilX - - - 0.0000009386 59.0
BYD1_k127_8774474_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000002958 218.0
BYD1_k127_8774474_3 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000000000000000000000000000001278 208.0
BYD1_k127_8774474_4 Carbohydrate esterase, sialic acid-specific acetylesterase - - - 0.0000000000000000000000000000000000000000000747 175.0
BYD1_k127_8774474_5 Biotin protein ligase C terminal domain K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000004294 166.0
BYD1_k127_8774474_6 type IV pilus modification protein PilV K02671 - - 0.00000000000000000000000000000000001191 147.0
BYD1_k127_8774474_7 PFAM Sporulation domain protein - - - 0.000000000000000000000000000001253 131.0
BYD1_k127_8774474_8 Domain of unknown function (DUF4124) - - - 0.00000000000000000000000000002747 123.0
BYD1_k127_8774474_9 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.0000000000000000000002557 102.0
BYD1_k127_8799386_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1454.0
BYD1_k127_8799386_1 FAD binding domain K20940 - 1.14.13.218 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 543.0
BYD1_k127_8799386_2 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 385.0
BYD1_k127_8799386_3 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001852 285.0
BYD1_k127_8799386_4 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000000007639 237.0
BYD1_k127_8799386_5 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000003036 215.0
BYD1_k127_8799386_6 - - - - 0.000000000000000000000000000000000000000000000002429 178.0
BYD1_k127_8799386_7 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000002659 136.0
BYD1_k127_8799386_8 Putative FMN-binding domain K07734 - - 0.00000000000000000000000000000002637 132.0
BYD1_k127_8799386_9 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03321 - - 0.0000000000000000000000027 109.0
BYD1_k127_8807654_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 571.0
BYD1_k127_8807654_1 ATP dependent DNA ligase C terminal region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 507.0
BYD1_k127_8807654_2 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 352.0
BYD1_k127_8807654_3 Methyl-transferase K18912 - 1.14.99.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 353.0
BYD1_k127_8807654_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000205 286.0
BYD1_k127_8807654_5 ATP dependent DNA ligase domain protein K01971 - 6.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000721 271.0
BYD1_k127_8807654_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.000000000000000000000000000000000000000000000000003136 193.0
BYD1_k127_8807654_7 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000001059 164.0
BYD1_k127_8807654_8 Uncharacterized conserved protein (DUF2277) - - - 0.000000000000000000000000000000009744 128.0
BYD1_k127_8807654_9 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000002655 130.0
BYD1_k127_8829203_0 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0 1047.0
BYD1_k127_8829203_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.638e-263 821.0
BYD1_k127_8829203_10 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 414.0
BYD1_k127_8829203_11 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 402.0
BYD1_k127_8829203_12 Dehydrogenase K15054 - 1.1.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002887 397.0
BYD1_k127_8829203_13 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000638 393.0
BYD1_k127_8829203_14 nuclease activity K02335 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003887,GO:0004518,GO:0004527,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008408,GO:0008409,GO:0009058,GO:0009059,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0033554,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 372.0
BYD1_k127_8829203_15 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 372.0
BYD1_k127_8829203_16 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002147 333.0
BYD1_k127_8829203_17 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000003665 256.0
BYD1_k127_8829203_18 PFAM pyridoxamine 5-phosphate K07006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003187 247.0
BYD1_k127_8829203_19 Cupin 2, conserved barrel - - - 0.000000000000000000000000000000000000000000000000000000000474 203.0
BYD1_k127_8829203_2 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 2.074e-236 743.0
BYD1_k127_8829203_20 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000002936 203.0
BYD1_k127_8829203_21 esterase K01432 - 3.5.1.9 0.0000000000000000000000000000000000000000000000000000004989 203.0
BYD1_k127_8829203_22 PFAM regulatory protein, MarR - - - 0.000000000000000000000000000000000000000000000000000003539 194.0
BYD1_k127_8829203_23 Endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000000000000004057 180.0
BYD1_k127_8829203_24 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000000000000000009383 178.0
BYD1_k127_8829203_25 response regulator - - - 0.0000000000000000000000000000000000000001249 160.0
BYD1_k127_8829203_26 ACT domain - - - 0.000000000000000000000000000007631 133.0
BYD1_k127_8829203_27 PFAM aromatic-ring-hydroxylating dioxygenase beta subunit - - - 0.0000000000000000000000000196 114.0
BYD1_k127_8829203_28 Predicted membrane protein (DUF2061) - - - 0.000000000000000004824 86.0
BYD1_k127_8829203_29 - - - - 0.0000000004829 69.0
BYD1_k127_8829203_3 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 552.0
BYD1_k127_8829203_30 - - - - 0.0000000008907 63.0
BYD1_k127_8829203_4 NHL repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 546.0
BYD1_k127_8829203_5 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 505.0
BYD1_k127_8829203_6 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006932 478.0
BYD1_k127_8829203_7 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 462.0
BYD1_k127_8829203_8 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003585 429.0
BYD1_k127_8829203_9 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002685 438.0
BYD1_k127_8831111_0 FAD dependent oxidoreductase - - - 3.132e-232 734.0
BYD1_k127_8831111_1 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 431.0
BYD1_k127_8831111_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 306.0
BYD1_k127_8831111_3 Domain of unknown function (DUF4743) - - - 0.000000000000000000000000000000000000000000000000000000000000834 218.0
BYD1_k127_8875449_0 Amidohydrolase K03392 - 4.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 482.0
BYD1_k127_8875449_1 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007058 274.0
BYD1_k127_8875449_2 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000000000000000000000000000000003405 203.0
BYD1_k127_8875449_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 - - 0.00000000000000000000000000000000000000001735 156.0
BYD1_k127_8875449_4 response regulator receiver - - - 0.00000000000000000000001632 105.0
BYD1_k127_8973273_0 Proton-conducting membrane transporter - - - 2.391e-279 872.0
BYD1_k127_8973273_1 ABC-type dipeptide transport system, periplasmic component K02035 - - 2.249e-227 715.0
BYD1_k127_8973273_10 N-terminal TM domain of oligopeptide transport permease C - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 419.0
BYD1_k127_8973273_11 5'-nucleotidase K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 404.0
BYD1_k127_8973273_12 a g-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 355.0
BYD1_k127_8973273_13 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003002 321.0
BYD1_k127_8973273_14 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 319.0
BYD1_k127_8973273_15 COG4237 Hydrogenase 4 membrane component (E) K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001431 295.0
BYD1_k127_8973273_16 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001217 261.0
BYD1_k127_8973273_17 peptidase S16 K07157 - - 0.000000000000000000000000000000000000000000362 176.0
BYD1_k127_8973273_18 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 K02806 - - 0.0000000000000000000000003515 106.0
BYD1_k127_8973273_19 Helix-turn-helix XRE-family like proteins - - - 0.000000000000000000000001385 115.0
BYD1_k127_8973273_2 Proton-conducting membrane transporter K12141 - - 3.69e-215 689.0
BYD1_k127_8973273_3 NADH-ubiquinone oxidoreductase chain 49kDa - - - 3.511e-203 643.0
BYD1_k127_8973273_4 Alcohol dehydrogenase GroES-like domain K00121 - 1.1.1.1,1.1.1.284 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 486.0
BYD1_k127_8973273_5 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003321 494.0
BYD1_k127_8973273_6 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008248 478.0
BYD1_k127_8973273_7 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 472.0
BYD1_k127_8973273_8 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 430.0
BYD1_k127_8973273_9 ATPases associated with a variety of cellular activities K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 423.0
BYD1_k127_8998426_0 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 415.0
BYD1_k127_8998426_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001748 422.0
BYD1_k127_8998426_10 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002357 292.0
BYD1_k127_8998426_11 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006267 268.0
BYD1_k127_8998426_12 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009966 253.0
BYD1_k127_8998426_13 FAD linked oxidase domain protein K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000006971 233.0
BYD1_k127_8998426_14 Luciferase-like monooxygenase K15854 - 1.14.14.3 0.0000000000000000000000000000000000000000000000000000000000002257 230.0
BYD1_k127_8998426_15 Esterase PHB depolymerase - - - 0.0000000000000000000000000000000000000009722 149.0
BYD1_k127_8998426_16 Ring hydroxylating subunit beta family protein 1 - - - 0.0000000000000000000000000000001745 130.0
BYD1_k127_8998426_17 - - - - 0.00000000000000007083 87.0
BYD1_k127_8998426_2 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 377.0
BYD1_k127_8998426_3 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 358.0
BYD1_k127_8998426_4 COG0501 Zn-dependent protease with chaperone function K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 376.0
BYD1_k127_8998426_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006918 376.0
BYD1_k127_8998426_6 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 338.0
BYD1_k127_8998426_7 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 346.0
BYD1_k127_8998426_8 ATP ADP translocase K03301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 328.0
BYD1_k127_8998426_9 COG0501 Zn-dependent protease with chaperone function - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 327.0
BYD1_k127_9028274_0 Cytochrome c-type biogenesis protein CcmF K02198 - - 6.674e-275 861.0
BYD1_k127_9028274_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.693e-221 701.0
BYD1_k127_9028274_10 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002293 252.0
BYD1_k127_9028274_11 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003808 248.0
BYD1_k127_9028274_12 oxidoreductase DsbE K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000002353 231.0
BYD1_k127_9028274_13 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000000000000003776 213.0
BYD1_k127_9028274_14 general secretion pathway protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000001394 206.0
BYD1_k127_9028274_15 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000001711 201.0
BYD1_k127_9028274_16 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000000000001159 205.0
BYD1_k127_9028274_17 Type II secretory pathway pseudopilin - - - 0.000000000000000000000000000000000000000000000000151 181.0
BYD1_k127_9028274_18 prepilin-type N-terminal cleavage methylation K02456 - - 0.00000000000000000000000000000000000000004673 160.0
BYD1_k127_9028274_19 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.0000000000000000000000000000000000000287 154.0
BYD1_k127_9028274_2 Cysteine-rich domain - - - 1.835e-211 671.0
BYD1_k127_9028274_20 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.00000000000000000000000000000000000004382 163.0
BYD1_k127_9028274_21 subunit of a heme lyase K02200 - - 0.00000000000000000000000000000000000005539 146.0
BYD1_k127_9028274_22 - - - - 0.00000000000000000000000000005168 125.0
BYD1_k127_9028274_23 Pilus assembly protein, PilO - - - 0.000000000000000006889 91.0
BYD1_k127_9028274_24 - - - - 0.0000000001675 69.0
BYD1_k127_9028274_25 - - - - 0.00000001611 66.0
BYD1_k127_9028274_26 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.00006045 46.0
BYD1_k127_9028274_3 homoserine dehydrogenase K00003 - 1.1.1.3 7.872e-201 634.0
BYD1_k127_9028274_4 Threonine synthase K01733 - 4.2.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 614.0
BYD1_k127_9028274_5 Secretin and TonB N terminus short domain K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001962 552.0
BYD1_k127_9028274_6 Type II secretion system (T2SS), protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 373.0
BYD1_k127_9028274_7 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003779 364.0
BYD1_k127_9028274_8 Aminotransferase class I and II K14261 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 288.0
BYD1_k127_9028274_9 Cytochrome c-type biogenesis protein K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008053 276.0
BYD1_k127_9048750_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18299 - - 3.319e-210 671.0
BYD1_k127_9048750_1 Outer membrane efflux protein K18903 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004566 552.0
BYD1_k127_9048750_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 440.0
BYD1_k127_9048750_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 410.0
BYD1_k127_9048750_4 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 307.0
BYD1_k127_9048750_5 Pfam Sulfatase K01133 - 3.1.6.6 0.0000000000000000000000000000000000000000000000000000000000000000006971 233.0
BYD1_k127_9048750_6 - - - - 0.00000000000000000000000000000000000000000000000000000000001846 215.0
BYD1_k127_9048750_7 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000005957 168.0
BYD1_k127_9048750_8 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976 - - 0.0000000000000000000386 98.0
BYD1_k127_9048750_9 PFAM response regulator receiver K13599 - - 0.000000000002359 74.0
BYD1_k127_9050177_0 Phospholipase D Active site motif K01115 - 3.1.4.4 3.05e-229 732.0
BYD1_k127_9050177_1 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002412 355.0
BYD1_k127_9050177_10 PFAM binding-protein-dependent transport systems inner membrane component K02050,K15554 - - 0.000000000000000000000000000000000000000000001426 173.0
BYD1_k127_9050177_11 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000001488 166.0
BYD1_k127_9050177_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.00000000000000000000000000000000006364 137.0
BYD1_k127_9050177_13 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000009116 124.0
BYD1_k127_9050177_14 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000005164 126.0
BYD1_k127_9050177_15 - - - - 0.00000000000000000002623 94.0
BYD1_k127_9050177_16 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000008687 88.0
BYD1_k127_9050177_2 COG1116 ABC-type nitrate sulfonate bicarbonate transport system, ATPase component K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 314.0
BYD1_k127_9050177_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005897 281.0
BYD1_k127_9050177_4 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004927 278.0
BYD1_k127_9050177_5 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000003522 220.0
BYD1_k127_9050177_6 thiamine-containing compound biosynthetic process K02051,K15553 - - 0.000000000000000000000000000000000000000000000000000000000001073 231.0
BYD1_k127_9050177_7 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000003542 223.0
BYD1_k127_9050177_8 COG0600 ABC-type nitrate sulfonate bicarbonate transport system, permease component - - - 0.00000000000000000000000000000000000000000000000000000002137 206.0
BYD1_k127_9050177_9 PFAM monooxygenase FAD-binding - - - 0.000000000000000000000000000000000000000000000000008669 194.0
BYD1_k127_9053747_0 B12 binding domain K00548 - 2.1.1.13 0.0 1605.0
BYD1_k127_9053747_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1202.0
BYD1_k127_9053747_10 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 582.0
BYD1_k127_9053747_11 Dihydroorotase, multifunctional complex type K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 549.0
BYD1_k127_9053747_12 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006904 511.0
BYD1_k127_9053747_13 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 479.0
BYD1_k127_9053747_14 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 448.0
BYD1_k127_9053747_15 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 447.0
BYD1_k127_9053747_16 COG0524 Sugar kinases, ribokinase family K00856 - 2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009283 424.0
BYD1_k127_9053747_17 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006451 409.0
BYD1_k127_9053747_18 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 404.0
BYD1_k127_9053747_19 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005333 389.0
BYD1_k127_9053747_2 dna topoisomerase III K03169 - 5.99.1.2 0.0 1118.0
BYD1_k127_9053747_20 Protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 364.0
BYD1_k127_9053747_21 Aminotransferase class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 353.0
BYD1_k127_9053747_22 PFAM Peptidoglycan-binding LysM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 337.0
BYD1_k127_9053747_23 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005872 312.0
BYD1_k127_9053747_24 Catalyzes the cycloisomerization of cis,cis-muconate K01857 - 5.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007461 317.0
BYD1_k127_9053747_25 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 289.0
BYD1_k127_9053747_26 TonB family K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009114 289.0
BYD1_k127_9053747_27 PFAM fumarylacetoacetate (FAA) hydrolase K16165 - 3.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001325 293.0
BYD1_k127_9053747_28 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001482 289.0
BYD1_k127_9053747_29 AMP-binding enzyme C-terminal domain K04110,K20458 - 6.2.1.25,6.2.1.27,6.2.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004606 294.0
BYD1_k127_9053747_3 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 1.859e-242 754.0
BYD1_k127_9053747_30 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001694 268.0
BYD1_k127_9053747_31 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002264 276.0
BYD1_k127_9053747_32 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000009177 264.0
BYD1_k127_9053747_33 TIGRFAM maleylacetoacetate isomerase K01800,K01801 - 5.2.1.2,5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000001617 260.0
BYD1_k127_9053747_34 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001182 246.0
BYD1_k127_9053747_35 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000003267 249.0
BYD1_k127_9053747_36 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000006884 241.0
BYD1_k127_9053747_37 Protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000167 232.0
BYD1_k127_9053747_38 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000005278 220.0
BYD1_k127_9053747_39 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000008067 216.0
BYD1_k127_9053747_4 ammonium transporter K03320 - - 2.948e-210 663.0
BYD1_k127_9053747_40 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000188 205.0
BYD1_k127_9053747_41 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000002156 201.0
BYD1_k127_9053747_42 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000001152 198.0
BYD1_k127_9053747_43 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000002855 213.0
BYD1_k127_9053747_44 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000000000000000000000004379 178.0
BYD1_k127_9053747_45 Histidine triad (Hit) protein K02503 - - 0.000000000000000000000000000000000000000000005477 168.0
BYD1_k127_9053747_46 - - - - 0.00000000000000000000000000000000000000000669 161.0
BYD1_k127_9053747_47 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000005455 130.0
BYD1_k127_9053747_48 Rubredoxin - - - 0.0000000000000000000000000000000588 124.0
BYD1_k127_9053747_49 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000002016 133.0
BYD1_k127_9053747_5 Mur ligase family, catalytic domain K02558 - 6.3.2.45 2.008e-202 641.0
BYD1_k127_9053747_50 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000005357 126.0
BYD1_k127_9053747_51 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000004411 125.0
BYD1_k127_9053747_52 Thioesterase superfamily - - - 0.000000000000000000000000004219 115.0
BYD1_k127_9053747_53 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000005527 105.0
BYD1_k127_9053747_54 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000357 103.0
BYD1_k127_9053747_55 Membrane fusogenic activity K09806 - - 0.000000000000000004298 87.0
BYD1_k127_9053747_56 oxidoreductase FAD NAD(P)-binding domain protein K14581 - 1.18.1.7 0.0000000000000001258 84.0
BYD1_k127_9053747_57 Belongs to the UPF0250 family K09158 - - 0.0000000000003939 72.0
BYD1_k127_9053747_58 Ribosomal protein L34 - - - 0.00000000002643 64.0
BYD1_k127_9053747_59 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.000006622 55.0
BYD1_k127_9053747_6 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 1.716e-194 630.0
BYD1_k127_9053747_60 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000228 50.0
BYD1_k127_9053747_7 Protein involved in ribonuclease activity and hydrolase activity K01147 - 3.1.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006702 616.0
BYD1_k127_9053747_8 Mg chelatase subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 598.0
BYD1_k127_9053747_9 Aminotransferase K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001779 583.0
BYD1_k127_9065044_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 3.916e-301 932.0
BYD1_k127_9065044_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 587.0
BYD1_k127_9065044_10 Domain of unknown function (DUF4845) - - - 0.0000000001147 67.0
BYD1_k127_9065044_11 Glutaredoxin-like domain (DUF836) - - - 0.0000000001631 65.0
BYD1_k127_9065044_2 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 419.0
BYD1_k127_9065044_3 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003155 396.0
BYD1_k127_9065044_4 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 344.0
BYD1_k127_9065044_5 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009741 321.0
BYD1_k127_9065044_6 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000009493 248.0
BYD1_k127_9065044_7 negative regulator of sigma E activity K03598 - - 0.00000000000000000000000000000000000000000000000000000000003884 213.0
BYD1_k127_9065044_8 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.00000000000000000000000000000000000000000000000000005251 193.0
BYD1_k127_9065044_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000001321 125.0
BYD1_k127_9165488_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1605.0
BYD1_k127_9165488_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 613.0
BYD1_k127_9165488_2 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 515.0
BYD1_k127_9165488_3 Histidine kinase K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002563 456.0
BYD1_k127_9165488_4 - - - - 0.0000000000000000007023 86.0
BYD1_k127_9165488_5 Protein of unknown function (DUF3617) - - - 0.000003212 54.0
BYD1_k127_9165488_6 Protein of unknown function (DUF3617) - - - 0.000009275 52.0
BYD1_k127_9199214_0 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001939 436.0
BYD1_k127_9199214_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758 - 4.2.1.136 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008363 440.0
BYD1_k127_9199214_10 pathogenesis - - - 0.000000000000000000000000000000000000000001387 169.0
BYD1_k127_9199214_11 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000002112 145.0
BYD1_k127_9199214_12 acetyltransferase K18816 GO:0003674,GO:0003824,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0034069,GO:0042221,GO:0046677,GO:0047663,GO:0050896 2.3.1.82 0.000000000000000000000000000000001964 130.0
BYD1_k127_9199214_13 PFAM glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000006212 120.0
BYD1_k127_9199214_14 MarR family transcriptional regulator - - - 0.0000000000000000000001255 103.0
BYD1_k127_9199214_15 - - - - 0.0000000000000000001505 100.0
BYD1_k127_9199214_16 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000001261 65.0
BYD1_k127_9199214_17 Haloacid dehalogenase domain protein hydrolase K20866 - 3.1.3.10 0.00000000002712 73.0
BYD1_k127_9199214_2 (Lipo)protein K07287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 386.0
BYD1_k127_9199214_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 352.0
BYD1_k127_9199214_4 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 294.0
BYD1_k127_9199214_5 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001895 284.0
BYD1_k127_9199214_6 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000006253 213.0
BYD1_k127_9199214_7 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000113 186.0
BYD1_k127_9199214_8 Domain of unknown function (DUF1835) - - - 0.0000000000000000000000000000000000000000000000001965 192.0
BYD1_k127_9199214_9 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000005616 173.0
BYD1_k127_9223818_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 1.704e-219 689.0
BYD1_k127_9223818_1 Dihydrolipoyl dehydrogenase K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 571.0
BYD1_k127_9223818_2 PFAM AFG1-family ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 439.0
BYD1_k127_9223818_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 410.0
BYD1_k127_9223818_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008589 395.0
BYD1_k127_9223818_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004617 285.0
BYD1_k127_9223818_6 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000832 211.0
BYD1_k127_93074_0 MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 586.0
BYD1_k127_93074_1 DNA repair photolyase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003586 449.0
BYD1_k127_93074_2 PFAM multi antimicrobial extrusion protein MatE - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007548 356.0
BYD1_k127_93074_3 - - - - 0.000000000000000000000004509 106.0
BYD1_k127_93074_4 Major facilitator superfamily - - - 0.000005754 49.0
BYD1_k127_9310754_0 Arginyl-tRNA synthetase K01887 - 6.1.1.19 1.582e-213 675.0
BYD1_k127_9310754_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 5.957e-212 679.0
BYD1_k127_9310754_10 glycosyl transferase group 1 - - - 0.000000000000000000000000000000000003492 156.0
BYD1_k127_9310754_11 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.0000000000000000000000000000411 122.0
BYD1_k127_9310754_12 - - - - 0.000000000000004399 76.0
BYD1_k127_9310754_13 Thiol disulfide interchange protein K03673 - - 0.00000008422 65.0
BYD1_k127_9310754_2 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 3.658e-202 646.0
BYD1_k127_9310754_3 TonB dependent receptor K02014 - - 4.937e-199 642.0
BYD1_k127_9310754_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 467.0
BYD1_k127_9310754_5 PFAM glycosyl transferase family 9 K02849 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 430.0
BYD1_k127_9310754_6 Glycosyltransferase Family 4 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003347 366.0
BYD1_k127_9310754_7 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009058 283.0
BYD1_k127_9310754_8 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002975 229.0
BYD1_k127_9310754_9 PFAM Sporulation domain protein - - - 0.000000000000000000000000000000000000000005964 163.0
BYD1_k127_9311779_0 Malate/L-lactate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004217 485.0
BYD1_k127_9311779_1 Metallo-beta-lactamase superfamily K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 389.0
BYD1_k127_9311779_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 322.0
BYD1_k127_9311779_3 VirC1 protein K03496 - - 0.000000000000000000000000000000000000001645 158.0
BYD1_k127_9311779_4 PFAM electron transport protein SCO1 SenC K07152 - - 0.000000000000000002551 89.0
BYD1_k127_9326243_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.216e-297 923.0
BYD1_k127_9326243_1 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007181 370.0
BYD1_k127_9326243_2 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009665 320.0
BYD1_k127_9326243_3 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 298.0
BYD1_k127_9326243_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000003365 182.0
BYD1_k127_9326243_5 Major Facilitator Superfamily - - - 0.000000000000000000000000000004764 134.0
BYD1_k127_9329304_0 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 392.0
BYD1_k127_9329304_1 oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 362.0
BYD1_k127_9329304_2 RNA polymerase sigma factor, sigma-70 family K03089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005997 342.0
BYD1_k127_9329304_3 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.00000000000000000000000000000000000000000000000000000000002192 213.0
BYD1_k127_9329304_4 SURF1-like protein K14998 - - 0.000000000000000000000000000000000000000000003853 170.0
BYD1_k127_9329304_5 signal sequence binding - - - 0.000000000000000000000000000000000000000002692 160.0
BYD1_k127_9329304_6 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.000001086 50.0
BYD1_k127_9329304_7 Protein of unknown function (DUF2909) - - - 0.000002563 57.0
BYD1_k127_942002_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1011.0
BYD1_k127_942002_1 asparagine K01953 - 6.3.5.4 2.078e-243 769.0
BYD1_k127_942002_10 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 334.0
BYD1_k127_942002_11 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 331.0
BYD1_k127_942002_12 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005283 317.0
BYD1_k127_942002_13 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 302.0
BYD1_k127_942002_14 PFAM Glycosyl transferase family 4 K13007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001145 299.0
BYD1_k127_942002_15 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004732 278.0
BYD1_k127_942002_16 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007723 276.0
BYD1_k127_942002_17 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004567 259.0
BYD1_k127_942002_18 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000001027 213.0
BYD1_k127_942002_19 - - - - 0.0000000000000000000000000000000000000000000000000000001299 215.0
BYD1_k127_942002_2 CoA-binding domain - - - 3.868e-219 700.0
BYD1_k127_942002_20 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000006924 207.0
BYD1_k127_942002_21 alpha beta - - - 0.00000000000000000000000000000000000000000000000000004121 196.0
BYD1_k127_942002_22 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000001354 183.0
BYD1_k127_942002_23 Rhodanese Homology Domain - - - 0.0000000000000000001446 92.0
BYD1_k127_942002_24 O-antigen polymerase - - - 0.0006834 52.0
BYD1_k127_942002_3 COG0367 Asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 1.306e-198 633.0
BYD1_k127_942002_4 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004402 445.0
BYD1_k127_942002_5 Male sterility protein K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004735 425.0
BYD1_k127_942002_6 COG1538 Outer membrane protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 424.0
BYD1_k127_942002_7 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 397.0
BYD1_k127_942002_8 3-Deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 382.0
BYD1_k127_942002_9 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 349.0
BYD1_k127_9433600_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 9.957e-304 945.0
BYD1_k127_9433600_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009275 471.0
BYD1_k127_9433600_10 Outer membrane protein beta-barrel domain K16079 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000004913 159.0
BYD1_k127_9433600_11 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000002859 104.0
BYD1_k127_9433600_2 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 350.0
BYD1_k127_9433600_3 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 349.0
BYD1_k127_9433600_4 Stress-induced protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003548 296.0
BYD1_k127_9433600_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000001681 227.0
BYD1_k127_9433600_6 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000002529 206.0
BYD1_k127_9433600_7 YMGG-like Gly-zipper - - - 0.000000000000000000000000000000000000000000000000000000446 200.0
BYD1_k127_9433600_8 membrane - - - 0.0000000000000000000000000000000000000000000002787 175.0
BYD1_k127_9433600_9 Protein phosphatase 2C K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000002514 174.0
BYD1_k127_9434353_0 Cytochrome c554 and c-prime - - - 9.248e-228 726.0
BYD1_k127_9434353_1 - - - - 0.0000000000000000000000000000000000000000000000004687 189.0
BYD1_k127_9434353_2 cytochrome c5 - - - 0.0000000000000000000000000000000000000000000000007027 181.0
BYD1_k127_9434353_3 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000002788 164.0
BYD1_k127_9434353_4 Cytochrome c - - - 0.0000000000000000000000000000000009623 149.0
BYD1_k127_9434353_5 Cytochrome c - - - 0.00000000000000000000000000006678 130.0
BYD1_k127_9434353_6 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.00000002752 66.0
BYD1_k127_9434353_7 PFAM cytochrome c, class I K08738 - - 0.00000003277 67.0
BYD1_k127_9434353_8 COG1734 DnaK suppressor protein K06204 - - 0.0000001618 57.0
BYD1_k127_9434353_9 Cytochrome c K08738 - - 0.0000001956 59.0
BYD1_k127_9571622_0 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 8.827e-229 736.0
BYD1_k127_9571622_1 carboxylase K01969 - 6.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 299.0
BYD1_k127_9571622_2 COG1024 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009712 299.0
BYD1_k127_9571622_3 OsmC-like protein - - - 0.00000000000000000000000000000000000001625 150.0
BYD1_k127_9571622_4 PFAM Pyruvate carboxyltransferase K01640 GO:0000287,GO:0003674,GO:0003824,GO:0004419,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005777,GO:0005782,GO:0005829,GO:0006082,GO:0006091,GO:0006520,GO:0006551,GO:0006552,GO:0006605,GO:0006625,GO:0006629,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009063,GO:0009081,GO:0009083,GO:0009987,GO:0015031,GO:0015833,GO:0016043,GO:0016054,GO:0016829,GO:0016830,GO:0016833,GO:0017144,GO:0019752,GO:0022607,GO:0030145,GO:0031907,GO:0031974,GO:0033036,GO:0033365,GO:0034613,GO:0042579,GO:0042802,GO:0042803,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0043574,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046395,GO:0046872,GO:0046907,GO:0046914,GO:0046950,GO:0046951,GO:0046983,GO:0051179,GO:0051234,GO:0051259,GO:0051262,GO:0051641,GO:0051649,GO:0065003,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072662,GO:0072663,GO:1901564,GO:1901565,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1902224 4.1.3.4 0.00000002364 56.0
BYD1_k127_9574640_0 Na H antiporter MnhB subunit-related protein K05559 - - 1.92e-290 902.0
BYD1_k127_9574640_1 NADH Ubiquinone plastoquinone (Complex I) K05561 - - 1.672e-195 632.0
BYD1_k127_9574640_10 antiporter K05562 - - 0.000000000000000000000000000000000000000000000001102 195.0
BYD1_k127_9574640_11 PFAM NADH-ubiquinone oxidoreductase chain 4L K05560 - - 0.00000000000000000000000000000000000000000000000747 175.0
BYD1_k127_9574640_12 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000001797 148.0
BYD1_k127_9574640_13 Cytochrome c K08738 - - 0.0000000000000000000000000000000000008951 146.0
BYD1_k127_9574640_14 COG2212 Multisubunit Na H antiporter, MnhF subunit K05563 - - 0.00000000000000000000000000000252 121.0
BYD1_k127_9574640_15 PFAM Na H antiporter subunit K05564 - - 0.00000000000000000000000000001831 129.0
BYD1_k127_9574640_16 DoxX family K15977 - - 0.00000000000000000000000001165 110.0
BYD1_k127_9574640_17 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000008906 100.0
BYD1_k127_9574640_18 Transcriptional regulator - - - 0.000000000000001497 80.0
BYD1_k127_9574640_19 Iron-binding zinc finger CDGSH type - - - 0.0000000000005997 73.0
BYD1_k127_9574640_2 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 614.0
BYD1_k127_9574640_20 PFAM Oxidoreductase FAD NAD(P)-binding - - - 0.000000004856 58.0
BYD1_k127_9574640_21 DoxX K15977 - - 0.00001663 51.0
BYD1_k127_9574640_22 PFAM NADPH-dependent FMN reductase K19784 - - 0.00008661 46.0
BYD1_k127_9574640_3 Na H antiporter MnhB subunit-related protein K05559 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 453.0
BYD1_k127_9574640_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006264 398.0
BYD1_k127_9574640_5 Domain of unknown function (DUF4439) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000101 278.0
BYD1_k127_9574640_6 cytochrome C peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001023 277.0
BYD1_k127_9574640_7 Carbamoyl-phosphate synthase L chain, ATP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000001915 225.0
BYD1_k127_9574640_8 polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000007657 209.0
BYD1_k127_9574640_9 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000002666 196.0
BYD1_k127_9577280_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005935 612.0
BYD1_k127_9577280_1 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 593.0
BYD1_k127_9577280_10 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000006138 191.0
BYD1_k127_9577280_11 Cupin domain - - - 0.00000000000000000000000000000000000000664 150.0
BYD1_k127_9577280_12 protein conserved in bacteria - - - 0.0000000000000000000000000000000001134 138.0
BYD1_k127_9577280_13 PFAM LrgA family protein K06518 - - 0.00000000000000000000000000000002136 130.0
BYD1_k127_9577280_14 GYD domain - - - 0.000000000000000000000001453 106.0
BYD1_k127_9577280_15 small protein containing a coiled-coil domain - - - 0.00000000000007439 73.0
BYD1_k127_9577280_16 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000002807 51.0
BYD1_k127_9577280_2 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 586.0
BYD1_k127_9577280_3 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000415 516.0
BYD1_k127_9577280_4 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003004 388.0
BYD1_k127_9577280_5 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K03119 - 1.14.11.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 319.0
BYD1_k127_9577280_6 LrgB-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 308.0
BYD1_k127_9577280_7 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001504 283.0
BYD1_k127_9577280_8 PFAM Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000003121 209.0
BYD1_k127_9577280_9 Protein of unknown function DUF126 K09128 - - 0.000000000000000000000000000000000000000000000000000249 192.0
BYD1_k127_9607405_0 Hydantoinase B/oxoprolinase K01469 - 3.5.2.9 0.0 1721.0
BYD1_k127_9607405_1 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002017 239.0
BYD1_k127_9607405_2 Protein involved in outer membrane biogenesis - - - 0.0006148 46.0
BYD1_k127_9613749_0 GXGXG motif K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 2307.0
BYD1_k127_9613749_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1373.0
BYD1_k127_9613749_10 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009793 391.0
BYD1_k127_9613749_11 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001756 274.0
BYD1_k127_9613749_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003263 276.0
BYD1_k127_9613749_13 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002344 268.0
BYD1_k127_9613749_14 Pilus assembly protein PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001517 251.0
BYD1_k127_9613749_15 Shikimate kinase K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000000001266 238.0
BYD1_k127_9613749_16 Uracil DNA glycosylase superfamily K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000000000000000000000000007562 228.0
BYD1_k127_9613749_17 Bacterial extracellular solute-binding protein K05813 - - 0.0000000000000000000000000000000000000000000000000000000002747 206.0
BYD1_k127_9613749_18 fimbrial biogenesis protein PilN K02663 - - 0.0000000000000000000000000000000000000000000000000000003495 199.0
BYD1_k127_9613749_19 pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000000000000000003982 163.0
BYD1_k127_9613749_2 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 7.245e-314 979.0
BYD1_k127_9613749_20 Inorganic ion transport and metabolism K06202 - - 0.000000000000000000000000000001248 123.0
BYD1_k127_9613749_21 Isochorismatase family - - - 0.000000000000000000000000105 108.0
BYD1_k127_9613749_22 - - - - 0.0000000000000000243 91.0
BYD1_k127_9613749_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.124e-271 849.0
BYD1_k127_9613749_4 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 1.874e-244 764.0
BYD1_k127_9613749_5 type II and III secretion system protein K02666 - - 1.329e-240 769.0
BYD1_k127_9613749_6 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 558.0
BYD1_k127_9613749_7 Pilus assembly protein K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 469.0
BYD1_k127_9613749_8 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009573 470.0
BYD1_k127_9613749_9 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003264 435.0
BYD1_k127_963547_0 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 458.0
BYD1_k127_963547_1 Exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000007528 140.0
BYD1_k127_963547_2 Hemerythrin HHE cation binding domain - - - 0.00000000000000000003846 96.0
BYD1_k127_963547_3 bacterial OsmY and nodulation domain K04065 - - 0.0000000000000004085 81.0
BYD1_k127_963547_4 DGC domain - - - 0.0001189 50.0
BYD1_k127_9650709_0 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006935 324.0
BYD1_k127_9650709_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002829 266.0
BYD1_k127_9650709_2 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000006677 194.0
BYD1_k127_9650709_3 OmpA family K02557 - - 0.00000000000000000000000000000000000000000004342 171.0
BYD1_k127_9650709_4 regulatory protein TetR - - - 0.0000000000000001093 88.0
BYD1_k127_9650709_5 Tripartite tricarboxylate transporter family receptor - - - 0.0000000001906 64.0
BYD1_k127_9651705_0 poly(R)-hydroxyalkanoic acid synthase K03821 - - 1.962e-266 831.0
BYD1_k127_9651705_1 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 4.785e-198 623.0
BYD1_k127_9651705_10 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000005207 144.0
BYD1_k127_9651705_11 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000009342 137.0
BYD1_k127_9651705_12 thiolester hydrolase activity K17362 - - 0.0000000000000000000000000002314 124.0
BYD1_k127_9651705_2 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 600.0
BYD1_k127_9651705_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 600.0
BYD1_k127_9651705_4 COG1960 Acyl-CoA dehydrogenases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 494.0
BYD1_k127_9651705_5 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 355.0
BYD1_k127_9651705_6 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001265 235.0
BYD1_k127_9651705_7 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000002138 230.0
BYD1_k127_9651705_8 Domain of unknown function (DUF4442) - - - 0.0000000000000000000000000000000000000008231 156.0
BYD1_k127_9651705_9 transcriptional - - - 0.00000000000000000000000000000000000006391 145.0
BYD1_k127_968992_0 FAD dependent oxidoreductase - - - 2.766e-233 738.0
BYD1_k127_968992_1 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002891 505.0
BYD1_k127_968992_10 CHRD domain - - - 0.000000000000000000000000000000209 130.0
BYD1_k127_968992_11 - - - - 0.00000000000000000000000007481 113.0
BYD1_k127_968992_2 gluconolactonase K01053 - 3.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006971 444.0
BYD1_k127_968992_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000998 369.0
BYD1_k127_968992_4 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 336.0
BYD1_k127_968992_5 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002123 331.0
BYD1_k127_968992_6 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 325.0
BYD1_k127_968992_7 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 301.0
BYD1_k127_968992_8 - - - - 0.0000000000000000000000000000000000003238 147.0
BYD1_k127_968992_9 PFAM CHRD domain containing protein - - - 0.0000000000000000000000000000000005595 135.0
BYD1_k127_9733875_0 Forkhead associated domain - - - 0.0000000000000000000000000000000000000000000000000002022 196.0
BYD1_k127_9733875_1 TRANSCRIPTIONal - - - 0.000000000000000000000000000000000000000000000000001835 189.0
BYD1_k127_9733875_2 3'-5' exonuclease - - - 0.000000000000000000000000000000000000000000001199 181.0
BYD1_k127_9733875_3 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000003921 153.0
BYD1_k127_9733875_4 - - - - 0.000000000000000000000000000000000000005111 157.0
BYD1_k127_9733875_5 Protein of unknown function (DUF3293) - - - 0.000000000000001461 82.0
BYD1_k127_9768022_0 ABC transporter transmembrane region K02021 - - 3.136e-205 657.0
BYD1_k127_9768022_1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 363.0
BYD1_k127_9768022_2 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005305 301.0
BYD1_k127_9768022_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000001363 241.0
BYD1_k127_9768022_4 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000002044 207.0
BYD1_k127_9904689_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003839 387.0
BYD1_k127_9904689_1 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005072 352.0
BYD1_k127_9904689_2 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000004328 217.0
BYD1_k127_9904689_3 Domain of unknown function (DUF1772) - - - 0.0000000000000000000000000000000000000000003844 166.0
BYD1_k127_9904689_4 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000005365 164.0
BYD1_k127_9904689_5 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000001114 174.0
BYD1_k127_9904689_6 - - - - 0.0000007176 53.0
BYD1_k127_9904689_7 - - - - 0.0003039 45.0
BYD1_k127_9927482_0 Bifunctional transglycosylase second domain K05365 - 2.4.1.129,3.4.16.4 1.03e-270 853.0
BYD1_k127_9927482_1 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 512.0
BYD1_k127_9927482_10 PFAM MmgE PrpD family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000215 303.0
BYD1_k127_9927482_11 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000174 273.0
BYD1_k127_9927482_12 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007429 256.0
BYD1_k127_9927482_13 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000474 249.0
BYD1_k127_9927482_14 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000001339 253.0
BYD1_k127_9927482_15 branched-chain amino acid ABC transporter ATP-binding protein K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000001903 243.0
BYD1_k127_9927482_16 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.0000000000000000000000000000000000000002613 154.0
BYD1_k127_9927482_17 Protein of unknown function (DUF3618) - - - 0.000000000000000000000000000000000000004853 162.0
BYD1_k127_9927482_18 Tetratricopeptide repeat - - - 0.0000000000000000000000000004355 122.0
BYD1_k127_9927482_19 - - - - 0.000001321 61.0
BYD1_k127_9927482_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009335 492.0
BYD1_k127_9927482_20 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00008272 52.0
BYD1_k127_9927482_3 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 460.0
BYD1_k127_9927482_4 Benzoate membrane transport protein K05782 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008702 411.0
BYD1_k127_9927482_5 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003596 355.0
BYD1_k127_9927482_6 dioxygenase activity K00477 - 1.14.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 345.0
BYD1_k127_9927482_7 PFAM Acyl-CoA dehydrogenase type 2 K16047 - 1.14.14.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009087 342.0
BYD1_k127_9927482_8 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 323.0
BYD1_k127_9927482_9 Belongs to the UPF0502 family K09915 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001458 281.0
BYD1_k127_9943928_0 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 536.0
BYD1_k127_9943928_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 516.0
BYD1_k127_9943928_2 tRNA (Uracil-5-)-methyltransferase K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 504.0
BYD1_k127_9943928_3 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 476.0
BYD1_k127_9943928_4 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 406.0
BYD1_k127_9943928_5 pfkB family carbohydrate kinase K21344 - 2.7.1.167 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 372.0
BYD1_k127_9943928_6 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 339.0
BYD1_k127_9943928_7 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 323.0
BYD1_k127_9943928_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.000000000000000000000000000000000000000000006654 165.0
BYD1_k127_9943928_9 Lipopolysaccharide assembly protein A domain K08992 - - 0.000000000000004581 81.0
BYD1_k127_9999849_0 Bacterial protein of unknown function (DUF839) K07093 - - 1.091e-225 713.0
BYD1_k127_9999849_1 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 593.0
BYD1_k127_9999849_2 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007506 374.0
BYD1_k127_9999849_3 Zinc dependent phospholipase C - - - 0.00000000000000000000000000000000000000000000000000000003681 205.0
BYD1_k127_9999849_4 - - - - 0.000000000000000000000000000000000000000000008659 171.0
BYD1_k127_9999849_5 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000001067 153.0