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Overview

ID MAG00039
Name BYD1_bin.55
Sample SMP0001
Taxonomy
Kingdom Archaea
Phylum Halobacteriota
Class Methanomicrobia
Order Methanomicrobiales
Family Methanospirillaceae
Genus Methanospirillum
Species
Assembly information
Completeness (%) 77.3
Contamination (%) 3.98
GC content (%) 46.0
N50 (bp) 2,752
Genome size (bp) 2,803,864

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3087

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10027249_0 ABC transporter, substrate-binding protein, aliphatic K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006625 492.0
BYD1_k127_10027249_1 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 400.0
BYD1_k127_10027249_2 PFAM ABC transporter related K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 367.0
BYD1_k127_10027249_3 Belongs to the universal ribosomal protein uL16 family K02866 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 304.0
BYD1_k127_10027249_4 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007892 291.0
BYD1_k127_10027971_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 1.364e-309 970.0
BYD1_k127_10027971_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K17884 - 2.7.8.39,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 290.0
BYD1_k127_10029181_0 PFAM Radical SAM domain protein - - - 6.958e-278 864.0
BYD1_k127_10029181_1 PFAM Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 563.0
BYD1_k127_10029181_2 Cysteine synthase A K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 490.0
BYD1_k127_10029181_3 TIGRFAM serine O-acetyltransferase K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001433 388.0
BYD1_k127_10029181_4 PFAM Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001532 267.0
BYD1_k127_10031678_0 FHA domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000352 278.0
BYD1_k127_10031678_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000001583 177.0
BYD1_k127_10039195_0 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001166 341.0
BYD1_k127_10039705_0 Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00125 - 1.17.1.9 1.065e-211 662.0
BYD1_k127_10039705_1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing K00123,K00367,K00372,K08356 - 1.17.1.9,1.20.2.1,1.20.9.1,1.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006495 446.0
BYD1_k127_10039705_2 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000006065 222.0
BYD1_k127_10077797_0 TIGRFAM mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 459.0
BYD1_k127_10077797_1 Periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000001468 180.0
BYD1_k127_10078273_0 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 313.0
BYD1_k127_10078273_1 PFAM Precorrin-8X methylmutase CbiC CobH K06042 - 5.4.99.60,5.4.99.61 0.0000000000000000000000000000000000000000002152 159.0
BYD1_k127_10088379_0 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003273 256.0
BYD1_k127_10088379_1 PFAM isocitrate isopropylmalate dehydrogenase K10978 - 1.1.1.87 0.000000000000000000000000000002438 122.0
BYD1_k127_1009177_0 PFAM Glycosyl transferase family 2 - - - 3.453e-296 922.0
BYD1_k127_1009177_1 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009179 478.0
BYD1_k127_1009177_2 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002157 256.0
BYD1_k127_1009177_3 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000001466 79.0
BYD1_k127_10125846_0 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000002034 84.0
BYD1_k127_10132848_0 Flavodoxin - - - 0.0000000000000000000000000000000000000000000000001003 183.0
BYD1_k127_10132848_1 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000002922 103.0
BYD1_k127_10132848_2 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000003162 71.0
BYD1_k127_10137028_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003819 272.0
BYD1_k127_10137028_1 Acetyltransferase (GNAT) domain K03823 - 2.3.1.183 0.00000000000000000000000000000000000000000000001207 175.0
BYD1_k127_10137028_2 Regulatory protein MarR - - - 0.0000000000000000000000000000000287 132.0
BYD1_k127_10147124_0 PAS domain K06930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 380.0
BYD1_k127_10147124_1 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000003893 224.0
BYD1_k127_10150024_0 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006571 257.0
BYD1_k127_10152008_0 Domain of unknown function (DUF1917) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003734 281.0
BYD1_k127_10153550_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000003566 243.0
BYD1_k127_10153550_1 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000006004 132.0
BYD1_k127_10159886_0 PFAM PA14 domain - - - 0.00000000086 66.0
BYD1_k127_10159886_1 Archaeal Type IV pilin, N-terminal - - - 0.00000001655 66.0
BYD1_k127_10168511_0 Serine threonine protein kinase - - - 1.644e-205 657.0
BYD1_k127_10168511_1 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001357 551.0
BYD1_k127_10170757_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1099.0
BYD1_k127_10178554_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001529 249.0
BYD1_k127_10201638_0 - - - - 0.0000000000000000000000000000000000000000000097 166.0
BYD1_k127_10201638_1 methyl-accepting chemotaxis protein K03406 - - 0.0000000000002637 78.0
BYD1_k127_10204770_0 PD-(D/E)XK nuclease superfamily K03657 - 3.6.4.12 4.327e-233 750.0
BYD1_k127_10204770_1 PFAM Uncharacterised protein family UPF0150 - - - 0.000000009175 56.0
BYD1_k127_10205363_0 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000524 563.0
BYD1_k127_10205363_1 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 383.0
BYD1_k127_10205363_2 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 284.0
BYD1_k127_10205363_3 Protein of unknown function DUF89 K09116 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006163 266.0
BYD1_k127_10205363_4 NfeD-like C-terminal, partner-binding - - - 0.000000000000000000000000000000000000000000000000000001642 195.0
BYD1_k127_10223242_0 D-aminoacyl-tRNA deacylase with broad substrate specificity. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo K09716 - 3.1.1.96 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 377.0
BYD1_k127_10223242_1 - - - - 0.00000000000005328 73.0
BYD1_k127_10223242_2 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000001345 66.0
BYD1_k127_10231861_0 PFAM PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 342.0
BYD1_k127_10231861_1 Mediates influx of magnesium ions K03284 GO:0000041,GO:0000287,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015087,GO:0015095,GO:0015318,GO:0015693,GO:0016020,GO:0016021,GO:0016043,GO:0022607,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0031226,GO:0034220,GO:0042802,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044425,GO:0044459,GO:0044464,GO:0046872,GO:0046873,GO:0046914,GO:0046915,GO:0050897,GO:0051179,GO:0051234,GO:0051259,GO:0051260,GO:0055085,GO:0065003,GO:0070838,GO:0071840,GO:0071944,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903830 - 0.0000000000000000000000000000000103 128.0
BYD1_k127_10262275_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02488 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003862 508.0
BYD1_k127_10262275_1 COG0210 Superfamily I DNA and RNA helicases K16898 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 342.0
BYD1_k127_10262275_2 - - - - 0.000000000000000000000000000000000000000000000000000001284 198.0
BYD1_k127_10280801_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 603.0
BYD1_k127_10280801_1 PFAM metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006232 268.0
BYD1_k127_10280801_2 PFAM Nitroreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000008441 235.0
BYD1_k127_10280801_3 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000003104 114.0
BYD1_k127_1028904_0 Domain of unknown function (DUF3821) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003402 351.0
BYD1_k127_10314647_0 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002712 366.0
BYD1_k127_10318919_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 414.0
BYD1_k127_10318919_1 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 314.0
BYD1_k127_10318919_2 Nitroreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005214 263.0
BYD1_k127_10320219_0 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 550.0
BYD1_k127_10320219_1 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000000000000000000001602 167.0
BYD1_k127_10320219_2 SNARE associated Golgi protein K03975 - - 0.00000000002068 67.0
BYD1_k127_10328627_0 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000000006954 207.0
BYD1_k127_10328627_1 response regulator, receiver - - - 0.0000000000000000000000004889 119.0
BYD1_k127_10332746_0 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001852 249.0
BYD1_k127_10381779_0 ABC-type metal ion transport system periplasmic component surface adhesin K02077,K14166 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004155 417.0
BYD1_k127_10381779_1 Archaeal Type IV pilin, N-terminal - - - 0.0000000000000004014 85.0
BYD1_k127_10385361_0 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004685 514.0
BYD1_k127_10385361_1 PFAM formyl transferase domain protein K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002276 295.0
BYD1_k127_10385361_2 PFAM Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000004668 178.0
BYD1_k127_10385361_3 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000000000000007464 88.0
BYD1_k127_10416545_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 546.0
BYD1_k127_10416545_1 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000008161 174.0
BYD1_k127_1044285_0 PFAM Pyruvate kinase, alpha beta domain K09126 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006623 301.0
BYD1_k127_1044285_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001872 248.0
BYD1_k127_1044285_2 Phosphate-starvation-inducible E - - - 0.0000000000000000000000000000000000000000000000000000000000001939 215.0
BYD1_k127_1044285_3 Sucrose-6F-phosphate phosphohydrolase - - - 0.00001959 55.0
BYD1_k127_10449267_0 PAS domain - - - 1.531e-246 784.0
BYD1_k127_10449267_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 497.0
BYD1_k127_10449267_2 PFAM PKD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 322.0
BYD1_k127_10449267_3 response regulator, receiver K03413 - - 0.00000000000000000000000000000000000000000000000004144 181.0
BYD1_k127_10449267_4 Tetratricopeptide repeat - - - 0.00000000000000000000002089 114.0
BYD1_k127_10450665_0 Belongs to the MCM family K10726 - - 0.0 1114.0
BYD1_k127_10450665_1 PFAM TatD-related deoxyribonuclease K07049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002197 415.0
BYD1_k127_10450665_2 pfam nmd3 K07562 - - 0.000000000000000000000000000000000001575 141.0
BYD1_k127_10450665_3 Catalyzes the conversion of 7,8-dihydroneopterin (H2Neo) to 6-hydroxymethyl-7,8-dihydropterin (6-HMD) K09739 - 4.1.2.25 0.0000000000000000000000000000000001646 135.0
BYD1_k127_10450665_4 Protein of unknown function (DUF424) K09148 - - 0.0000000000000000000000000001572 118.0
BYD1_k127_10464088_0 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.0000006755 61.0
BYD1_k127_10472748_0 Pas domain K00974,K02485 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000316 276.0
BYD1_k127_10472748_1 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000006187 166.0
BYD1_k127_10481036_0 - - - - 0.0000000000000000000000000000000000239 140.0
BYD1_k127_10492297_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 464.0
BYD1_k127_10492297_1 Cobalamin B12-binding domain protein K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000009427 222.0
BYD1_k127_10492297_2 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000000000000000000000000001127 185.0
BYD1_k127_10492297_3 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000007554 85.0
BYD1_k127_10503202_0 Catalyzes the conversion of AMP and phosphate to adenine and ribose 1,5-bisphosphate (R15P). Exhibits phosphorylase activity toward CMP and UMP in addition to AMP. Functions in an archaeal AMP degradation pathway, together with R15P isomerase and RubisCO K18931 - 2.4.2.57 4.702e-255 795.0
BYD1_k127_10503202_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005443 256.0
BYD1_k127_10503202_2 Domain of unknown function (DUF3821) - - - 0.0000000000001125 70.0
BYD1_k127_10528576_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003912 523.0
BYD1_k127_10528576_1 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 - 1.2.7.1 0.00000000000000000000000000000000000003256 143.0
BYD1_k127_10528576_2 PFAM response regulator receiver - - - 0.0000000001827 63.0
BYD1_k127_10532406_0 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 336.0
BYD1_k127_10537314_0 May be involved in maturation of the 30S ribosomal subunit K02966 - - 0.00000000000000000000000000000000000000000000000000000000000000000000334 236.0
BYD1_k127_10537314_1 subunit of tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain K07585 - - 0.00000000000000000000000000000000000000000000000001235 183.0
BYD1_k127_10537314_2 Belongs to the PDCD5 family K06875 - - 0.000000000000000000000000000000000000000000002283 167.0
BYD1_k127_10537314_3 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03540 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.000000000000000000000000000001097 124.0
BYD1_k127_10537314_4 CRS1_YhbY K07574 - - 0.000000000000000000000000001434 114.0
BYD1_k127_10544222_0 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.781e-197 617.0
BYD1_k127_10544222_1 Belongs to the UPF0434 family - - - 0.000000000000000000000002036 102.0
BYD1_k127_10555176_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K00390,K14108 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000006092 189.0
BYD1_k127_10555176_1 Aldehyde ferredoxin oxidoreductase, N-terminal domain K03738 - 1.2.7.5 0.0000000000000000000000000000000000005764 140.0
BYD1_k127_10555176_2 Iron-sulfur cluster binding protein - - - 0.000000000000000000000000000000388 125.0
BYD1_k127_10560811_0 PFAM ABC transporter K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 417.0
BYD1_k127_10560811_1 TIGRFAM PAS domain S-box K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 345.0
BYD1_k127_10560811_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 320.0
BYD1_k127_10560811_3 PFAM pyridoxamine 5'-phosphate oxidase-related FMN-binding K07006 - - 0.000000000000000000000000000000000000000000000000000000000000001365 222.0
BYD1_k127_10560811_4 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000562 84.0
BYD1_k127_10568377_0 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 430.0
BYD1_k127_10568377_1 uridine kinase K00855,K00876 - 2.7.1.19,2.7.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 377.0
BYD1_k127_10568377_2 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000002075 172.0
BYD1_k127_10578581_0 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000001439 162.0
BYD1_k127_10578581_1 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000003605 160.0
BYD1_k127_10583217_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 407.0
BYD1_k127_10583217_1 - - - - 0.0000000000000000000000000000001706 123.0
BYD1_k127_10592729_0 Belongs to the glycosyl hydrolase 57 family - - - 0.0 1025.0
BYD1_k127_10592729_1 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 406.0
BYD1_k127_10599948_0 PFAM chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008287 269.0
BYD1_k127_10604907_0 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000006981 134.0
BYD1_k127_10604907_1 - - - - 0.00000000000000000000000000000006879 129.0
BYD1_k127_10630744_0 E1-E2 ATPase K17686 - 3.6.3.54 5.513e-261 830.0
BYD1_k127_10630744_1 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009689 293.0
BYD1_k127_10630744_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001744 238.0
BYD1_k127_10630744_3 Uncharacterized conserved protein (DUF2196) - - - 0.00000000000000000009419 89.0
BYD1_k127_10630744_4 PFAM Aminotransferase class I and II K05825 - - 0.000000001097 59.0
BYD1_k127_10630744_5 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.00003093 54.0
BYD1_k127_10642929_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 500.0
BYD1_k127_10642929_1 PFAM ABC transporter related K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 411.0
BYD1_k127_10642929_2 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 331.0
BYD1_k127_10642929_3 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.0000000000001054 82.0
BYD1_k127_1066350_0 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004225 488.0
BYD1_k127_1066350_1 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008715 389.0
BYD1_k127_1066350_2 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000068 253.0
BYD1_k127_1066350_3 Domain in cystathionine beta-synthase and other proteins. K07182 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002627 258.0
BYD1_k127_106636_0 Domain of unknown function (DUF1848) - - - 0.00000000000000000000000000000000000000000000000000000000001245 216.0
BYD1_k127_106636_1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases - - - 0.0000000000000000000000000000000000000000000000000003213 188.0
BYD1_k127_1067251_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 511.0
BYD1_k127_1067251_1 - - - - 0.00000000000000000000003807 105.0
BYD1_k127_1067251_2 - - - - 0.0000000000000000000004056 100.0
BYD1_k127_10673555_0 Trehalose-phosphatase K16055 - 2.4.1.15,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 338.0
BYD1_k127_10679073_0 SMART DNA-directed DNA polymerase B K02319 - 2.7.7.7 4.548e-239 748.0
BYD1_k127_10679073_1 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.000000000000000000001767 95.0
BYD1_k127_10684835_0 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001465 334.0
BYD1_k127_10684835_1 Protein of unknown function DUF86 - - - 0.0000005486 57.0
BYD1_k127_10698408_0 O-methyltransferase K15256 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 330.0
BYD1_k127_10698408_1 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006034 252.0
BYD1_k127_10699498_0 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 290.0
BYD1_k127_10699498_1 PFAM Semialdehyde dehydrogenase NAD - binding K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000001822 183.0
BYD1_k127_10699498_2 - - - - 0.00000000000000000000000000000000000000000000106 169.0
BYD1_k127_10699498_3 Binds double-stranded DNA tightly but without sequence specificity. It is distributed uniformly and abundantly on the chromosome, suggesting a role in chromatin architecture. However, it does not significantly compact DNA. Binds rRNA and mRNA in vivo. May play a role in maintaining the structural and functional stability of RNA, and, perhaps, ribosomes K03622 - - 0.000000000000000000000000000000000000001772 149.0
BYD1_k127_10699498_4 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000006067 99.0
BYD1_k127_10706273_0 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 436.0
BYD1_k127_10706273_1 PFAM transport system permease protein K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002046 257.0
BYD1_k127_10714943_0 PFAM multi antimicrobial extrusion protein MatE - - - 1.804e-206 650.0
BYD1_k127_10714943_1 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004877 415.0
BYD1_k127_10714943_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003391 238.0
BYD1_k127_10714943_3 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.00000000000000000000000000000000000001783 157.0
BYD1_k127_10714943_4 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000004395 148.0
BYD1_k127_10714943_5 COG1914 Mn2 and Fe2 transporters of the NRAMP family - - - 0.00000000000000000000000000001189 133.0
BYD1_k127_10719256_0 Protein of unknown function (DUF1524) - - - 9.404e-224 707.0
BYD1_k127_10719256_1 Domain of unknown function (DUF1743) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007351 385.0
BYD1_k127_10719619_0 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000000000000000000000000000000000000000000000000007026 202.0
BYD1_k127_10719619_1 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000002173 155.0
BYD1_k127_10750453_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0 1232.0
BYD1_k127_10750453_1 PFAM Beta propeller domain K14475 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003013 621.0
BYD1_k127_10761916_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K03234 - - 0.0 1334.0
BYD1_k127_10761916_1 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center K02992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006064 340.0
BYD1_k127_10761916_2 With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits K02950 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 285.0
BYD1_k127_10761916_3 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000003298 233.0
BYD1_k127_10761916_4 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00006547 45.0
BYD1_k127_10777071_0 Major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003637 412.0
BYD1_k127_10780769_0 PP-loop domain protein K06864 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 335.0
BYD1_k127_10780769_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.0003851 45.0
BYD1_k127_10788430_0 Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001201 583.0
BYD1_k127_10788430_1 PFAM phosphoesterase, RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 334.0
BYD1_k127_10788430_2 ribosomal protein S15 K02956 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001194 249.0
BYD1_k127_10792131_0 Membrane bound hydrogenase subunit K18016 - 1.12.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 606.0
BYD1_k127_10792131_1 PFAM respiratory-chain NADH dehydrogenase, subunit 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 511.0
BYD1_k127_10792131_2 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.0000000004651 63.0
BYD1_k127_1079945_0 Histidine kinase - - - 0.000000000000000000000000000000000002077 151.0
BYD1_k127_10803134_0 Heat shock 70 kDa protein K04043 - - 2.466e-205 643.0
BYD1_k127_10803134_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 1.085e-199 626.0
BYD1_k127_10803134_2 response regulator K02485,K03413 - - 0.0000000000000000000000000000000000000000000003762 169.0
BYD1_k127_10803469_0 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 7.383e-236 740.0
BYD1_k127_10803469_1 PFAM Radical SAM domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 529.0
BYD1_k127_10803469_2 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K06857 - 3.6.3.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 368.0
BYD1_k127_10803469_3 beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 363.0
BYD1_k127_10803469_4 ABC-type tungstate transport system, permease component K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 359.0
BYD1_k127_10803469_5 ABC-type tungstate transport system, periplasmic component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 321.0
BYD1_k127_10803469_6 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000003427 171.0
BYD1_k127_10803469_7 PFAM PKD domain containing protein - - - 0.00000000000000000000001001 115.0
BYD1_k127_10806433_0 Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002941 424.0
BYD1_k127_10806433_1 Transposase DDE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001467 263.0
BYD1_k127_10806433_2 Homeodomain-like domain - - - 0.000000000000000000001137 96.0
BYD1_k127_10848719_1 - - - - 0.0000000000000000000001271 99.0
BYD1_k127_10849376_0 DNA methylase K00571 - 2.1.1.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003472 428.0
BYD1_k127_10849376_1 sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp K01170 - 4.6.1.16 0.0000000000000000008705 86.0
BYD1_k127_10858490_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 0.0 1062.0
BYD1_k127_10858490_1 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.00000000000000000000000000000000000000000000000000000000000006938 214.0
BYD1_k127_10870286_0 Cation transporter/ATPase, N-terminus K01537,K01539 - 3.6.3.8,3.6.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 355.0
BYD1_k127_10876622_1 Domain of unknown function (DUF4277) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009107 390.0
BYD1_k127_10876622_2 Archaeal Type IV pilin, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 346.0
BYD1_k127_10876622_3 Archaeal Type IV pilin, N-terminal - - - 0.000000000000000000000000000000000000000000000000009962 187.0
BYD1_k127_10876622_4 Archaeal Type IV pilin, N-terminal - - - 0.00000000000000000000000000000000000000007945 155.0
BYD1_k127_10876622_5 Domain of unknown function (DUF4277) - - - 0.00000000000000000000563 93.0
BYD1_k127_10877235_0 Putative DNA-binding domain K03655 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005269 313.0
BYD1_k127_10877235_1 HsdM N-terminal domain K03427 - 2.1.1.72 0.000000000000000000000000000000001567 139.0
BYD1_k127_10880341_0 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 421.0
BYD1_k127_10880341_1 - - - - 0.0000000000000000000000001505 109.0
BYD1_k127_10880429_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 8.026e-201 632.0
BYD1_k127_10880429_1 Serine threonine protein kinase K02035,K08884,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000001035 250.0
BYD1_k127_10880429_2 all-trans-retinol 13,14-reductase activity - - - 0.000000000000000000000004702 102.0
BYD1_k127_10916252_0 - - - - 0.0000000000000000000000000000000000000000000000000000000005227 214.0
BYD1_k127_10916252_1 - - - - 0.0000000003617 63.0
BYD1_k127_10922887_0 ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000004262 253.0
BYD1_k127_10928737_0 Catalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) K11781 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 495.0
BYD1_k127_10928737_1 Catalyzes the condensation of 4-aminobenzoate (pABA) with 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta-ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P) K06984 - 2.4.2.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006165 441.0
BYD1_k127_10928737_2 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 390.0
BYD1_k127_10928737_3 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000001602 167.0
BYD1_k127_10928737_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000007685 146.0
BYD1_k127_10928737_5 PFAM Cache, type 2 domain protein - - - 0.0000000000000000000000003078 110.0
BYD1_k127_10928737_6 Radical SAM ThiC family K03147 - 4.1.99.17 0.0000000000000001544 81.0
BYD1_k127_10936781_0 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005566 365.0
BYD1_k127_10936781_1 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.00000000000000000000006871 99.0
BYD1_k127_10952880_0 ATP-binding region, ATPase domain protein domain protein K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 590.0
BYD1_k127_10952880_1 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002847 250.0
BYD1_k127_10952880_2 SPFH domain-Band 7 family - - - 0.00000000000000000000000000000000000000000000000000009025 194.0
BYD1_k127_10957048_0 PFAM TPR repeat-containing protein K00575 - 2.1.1.80 0.0000000000000000000000000000008648 131.0
BYD1_k127_10957048_2 Ion transport protein K10716 - - 0.0002224 46.0
BYD1_k127_10962998_0 PFAM type II secretion system protein E K07332 - - 0.0 1156.0
BYD1_k127_10962998_1 KaiC K07331 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008872 458.0
BYD1_k127_10962998_2 Archaeal flagellar protein F K07329 - - 0.0000000000000000000004084 101.0
BYD1_k127_10980927_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0 1089.0
BYD1_k127_10980927_1 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000217 58.0
BYD1_k127_10986808_0 PFAM chemotaxis sensory transducer K03406 - - 2.157e-245 776.0
BYD1_k127_10986808_1 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 355.0
BYD1_k127_10986808_2 Tetratricopeptide repeat - - - 0.0004594 51.0
BYD1_k127_10987393_0 FIST N domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 363.0
BYD1_k127_10987393_1 Belongs to the UPF0280 family K09740 - - 0.0000000000000000000000000000000000000006862 150.0
BYD1_k127_10987393_2 FIST C domain - - - 0.0000000000003766 71.0
BYD1_k127_11003713_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007965 285.0
BYD1_k127_11003713_1 PFAM ABC transporter K00400 - - 0.0000000000000000000000000000000000000000000000000000000000000004547 222.0
BYD1_k127_11003713_2 Uncharacterized protein conserved in archaea (DUF2124) - - - 0.000000000000000000000000000000000000000000000000000001096 196.0
BYD1_k127_11003713_3 cell wall organization - - - 0.0000000000000000000000000001056 125.0
BYD1_k127_11007376_0 Replication factor C K04801 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007891 434.0
BYD1_k127_11007376_1 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 347.0
BYD1_k127_110086_0 Belongs to the alpha-IPM synthase homocitrate synthase family K10977 - 2.3.3.14 6.882e-209 653.0
BYD1_k127_110086_1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 372.0
BYD1_k127_110086_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K16792 - 4.2.1.114 0.000000000000000000000000000000000000000000000000000000000000000000001742 246.0
BYD1_k127_110086_3 Elongator protein 3 MiaB NifB - - - 0.000000000000000000000002427 104.0
BYD1_k127_11009244_0 Ribonuclease R winged-helix domain K09720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 482.0
BYD1_k127_11009244_1 TIGRFAM deoxycytidine triphosphate deaminase K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000004294 205.0
BYD1_k127_11009244_2 - - - - 0.000000009342 63.0
BYD1_k127_11014146_0 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.02e-273 847.0
BYD1_k127_11014146_2 HEAT repeats - - - 0.0000000000000000000000000000000000000001247 156.0
BYD1_k127_11021889_0 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004075 291.0
BYD1_k127_11021889_1 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000105 256.0
BYD1_k127_11023165_0 Aldo/keto reductase family K07079 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 366.0
BYD1_k127_11032554_0 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 437.0
BYD1_k127_11043625_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 461.0
BYD1_k127_11043625_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009291 417.0
BYD1_k127_11043625_2 PFAM regulatory protein, ArsR K07721 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001165 265.0
BYD1_k127_11058042_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 612.0
BYD1_k127_11058042_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 485.0
BYD1_k127_11058042_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007253 426.0
BYD1_k127_11058042_3 Fe-S type, tartrate fumarate subfamily, alpha K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 364.0
BYD1_k127_11058042_4 Fe-S type, tartrate fumarate subfamily, beta K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 297.0
BYD1_k127_11058042_5 Oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000002207 222.0
BYD1_k127_11058042_6 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00176 - 1.2.7.3 0.00000000000000000000000000000000000000000000005358 170.0
BYD1_k127_11058042_7 Belongs to the universal ribosomal protein uL16 family K02866 - - 0.0000000006298 59.0
BYD1_k127_11064203_0 cytochrome c biogenesis protein, transmembrane region - - - 0.0000000000000000000000000000000000000001559 154.0
BYD1_k127_11064203_1 Xaa-His dipeptidase K01270 - - 0.0000000000000005877 80.0
BYD1_k127_11064203_2 - - - - 0.00000003083 65.0
BYD1_k127_11064203_3 Two component signalling adaptor domain K03408 - - 0.00000009377 59.0
BYD1_k127_11072580_0 COG1361 S-layer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 295.0
BYD1_k127_11072580_1 protein conserved in archaea - - - 0.000000000000000000000000000000000000000000000000000012 198.0
BYD1_k127_11079518_0 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002633 589.0
BYD1_k127_110929_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 362.0
BYD1_k127_11102261_0 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 2.628e-268 828.0
BYD1_k127_11102261_1 PFAM glutamine amidotransferase, class-II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 603.0
BYD1_k127_11102261_2 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 294.0
BYD1_k127_11102261_3 Belongs to the UPF0215 family K09120 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001821 253.0
BYD1_k127_11102261_4 Belongs to the glutamate synthase family - - - 0.00000000000000000000000000000000000000000000002473 172.0
BYD1_k127_11102261_5 - - - - 0.000000000000000000001114 102.0
BYD1_k127_11109028_0 PFAM PUA domain K00390 - 1.8.4.10,1.8.4.8 5.973e-220 691.0
BYD1_k127_11109028_1 PFAM bifunctional deaminase-reductase domain protein K14654 - 1.1.1.302 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003278 322.0
BYD1_k127_11109028_10 COG1403 Restriction endonuclease - - - 0.00000000000000000000000000000000000000004416 156.0
BYD1_k127_11109028_11 Domain of unknown function (DUF4040) K05566 - - 0.00000000000000000000000000006681 118.0
BYD1_k127_11109028_12 Multisubunit Na H antiporter, MnhF subunit K05570 - - 0.0000000000000000000000005137 107.0
BYD1_k127_11109028_13 Membrane bound hydrogenase - - - 0.00000000000000000000002731 101.0
BYD1_k127_11109028_14 Domain of unknown function (DUF1894) - - - 0.000000000000009717 77.0
BYD1_k127_11109028_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 310.0
BYD1_k127_11109028_3 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000001073 265.0
BYD1_k127_11109028_4 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001982 254.0
BYD1_k127_11109028_5 PFAM conserved - - - 0.0000000000000000000000000000000000000000000000000000000000000000005325 231.0
BYD1_k127_11109028_6 PFAM Na H antiporter MnhB subunit-related protein K05566,K14118 - - 0.000000000000000000000000000000000000000000000000000000000001409 213.0
BYD1_k127_11109028_8 TIGRFAM monovalent cation proton antiporter, MnhG PhaG subunit K05571 - - 0.00000000000000000000000000000000000000000000007604 170.0
BYD1_k127_11109028_9 response regulator, receiver - - - 0.000000000000000000000000000000000000000000005159 166.0
BYD1_k127_11117249_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 432.0
BYD1_k127_11117249_1 Flavodoxin-like fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002651 364.0
BYD1_k127_11117249_2 COG0025 NhaP-type Na H and K H K03316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 287.0
BYD1_k127_11117249_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006154 271.0
BYD1_k127_11117249_4 SpoVT / AbrB like domain - - - 0.0000000004529 62.0
BYD1_k127_11118305_0 SMART regulatory protein, Crp K07730 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004602 424.0
BYD1_k127_11118305_1 DEAD DEAH box helicase domain protein K03725 - - 0.000000000000000000000000000000000000000000000000000000000000000000006176 237.0
BYD1_k127_11119093_0 PFAM chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 337.0
BYD1_k127_11119093_1 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003355 317.0
BYD1_k127_11119093_2 PFAM CheW domain protein K03408 - - 0.00000000000000000000000000000000000000000000000000000003554 200.0
BYD1_k127_11123743_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005506 518.0
BYD1_k127_11123743_1 Protein of unknown function (DUF475) K09799 - - 0.000000000000000000000000000000000001056 140.0
BYD1_k127_11165785_0 esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 344.0
BYD1_k127_11165785_1 PFAM phosphoesterase, PA-phosphatase related K19302 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001986 259.0
BYD1_k127_11165785_2 metallopeptidase activity - - - 0.0000000000000000000000003675 108.0
BYD1_k127_11169210_0 Belongs to the aspartokinase family K00928 - 2.7.2.4 1.185e-232 726.0
BYD1_k127_11169210_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003422 591.0
BYD1_k127_11169210_2 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 491.0
BYD1_k127_11169210_3 Succinate dehydrogenase fumarate reductase flavoprotein subunit K00239,K18209 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114 1.3.4.1,1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001722 296.0
BYD1_k127_11169210_4 PFAM PUA domain containing protein K07575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002265 264.0
BYD1_k127_11169210_5 ZPR1-related zinc finger protein K06874 - - 0.000000000000000000000000000000000000000000000000000000000000000000008919 237.0
BYD1_k127_11169210_6 Pfam:DUF552 K09152 - - 0.000000000000000000000000000000000000000000000000000000000000003792 218.0
BYD1_k127_11169210_7 PFAM Like-Sm ribonucleoprotein, core K04796 - - 0.000000000000000000000000000000000003207 141.0
BYD1_k127_11169210_8 binds to the 23S rRNA K02922 - - 0.0000000000006303 70.0
BYD1_k127_1117163_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000528 349.0
BYD1_k127_1117163_1 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K01823,K06989 - 1.4.1.21,5.3.3.2 0.00000000000000000000000000000000000000003012 153.0
BYD1_k127_1117163_2 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.0000000000002434 72.0
BYD1_k127_11181194_0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008576 516.0
BYD1_k127_11195642_0 Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys) K07587 - 6.1.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000191 285.0
BYD1_k127_11195642_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000007033 235.0
BYD1_k127_11207281_0 cog1234, metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 333.0
BYD1_k127_1121146_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03044 - 2.7.7.6 5.108e-229 711.0
BYD1_k127_11212918_0 Cobalt transport protein K02008 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007157 283.0
BYD1_k127_11212918_1 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001328 247.0
BYD1_k127_11212918_2 iron dependent repressor K03709 - - 0.000000000000000000005543 93.0
BYD1_k127_11216274_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000187 97.0
BYD1_k127_11220452_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005017 273.0
BYD1_k127_11220474_0 PFAM metal-dependent phosphohydrolase, HD sub domain K06885 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 498.0
BYD1_k127_11220474_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002386 376.0
BYD1_k127_11220474_2 Catalyzes the transfer of the 2-phospholactate moiety from lactyl (2) diphospho-(5')guanosine (LPPG) to 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) with the formation of the L- lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5- deazariboflavin (F420-0) and GMP K11212 - 2.7.8.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 349.0
BYD1_k127_11238033_0 methyl-accepting chemotaxis protein K03406 - - 8.997e-231 734.0
BYD1_k127_11238033_1 COG0553 Superfamily II DNA RNA helicases, SNF2 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008754 594.0
BYD1_k127_11238033_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 578.0
BYD1_k127_11238033_3 PFAM CheW domain protein K03408 - - 0.00000000000000000000000000000000000000000000000000000000000000000003771 235.0
BYD1_k127_11238033_4 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000006379 139.0
BYD1_k127_11238033_5 SWIM zinc finger - - - 0.00000000000000000000000003917 119.0
BYD1_k127_11251230_0 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 288.0
BYD1_k127_11251230_1 PFAM dihydropteroate synthase, DHPS - - - 0.000000000000000000000000000000000000000000000000000000000000000000001174 240.0
BYD1_k127_11251573_0 methyl-accepting chemotaxis protein K03406 - - 2.313e-249 787.0
BYD1_k127_11251573_1 - - - - 0.0000000000000000000000003048 106.0
BYD1_k127_11264301_0 Polyphosphate kinase 2 (PPK2) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001723 275.0
BYD1_k127_11264301_1 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000001113 214.0
BYD1_k127_11274746_0 metal-dependent hydrolase with the TIM-barrel fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 370.0
BYD1_k127_11274746_1 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000000000000000000000000000000000853 243.0
BYD1_k127_11276225_0 Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing K00197 - 2.1.1.245 1.302e-209 661.0
BYD1_k127_11276225_1 Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing K00194 - 2.1.1.245 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 611.0
BYD1_k127_11276225_2 Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron-sulfur protein (the gamma-delta complex) K00193 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003855 271.0
BYD1_k127_11276225_3 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000007268 146.0
BYD1_k127_11279039_0 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001732 303.0
BYD1_k127_11279039_1 Dinitrogenase iron-molybdenum cofactor biosynthesis - - - 0.0000000000000000000004913 100.0
BYD1_k127_11279039_2 PFAM Tetratricopeptide repeat - - - 0.000000006317 64.0
BYD1_k127_11331783_0 plastoquinone (Complex I) K12137 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 379.0
BYD1_k127_11331783_1 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000537 314.0
BYD1_k127_11332842_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is a component of the KEOPS complex that is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. The Kae1 domain likely plays a direct catalytic role in this reaction. The Bud32 domain probably displays kinase activity that regulates Kae1 function K15904 - 2.3.1.234,2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 548.0
BYD1_k127_11332842_1 TIGRFAM DNA-directed RNA polymerase K03049 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 341.0
BYD1_k127_11332842_2 Belongs to the UPF0218 family K09735 - - 0.000000000000000000000000000000000000000000000000000002353 195.0
BYD1_k127_11332842_3 Transcription elongation factor Spt4 K03050 - 2.7.7.6 0.000000000000000000000000000000002632 129.0
BYD1_k127_11332842_4 Belongs to the eukaryotic ribosomal protein eS24 family K02974,K09735 - - 0.0000000000000000000000000002838 117.0
BYD1_k127_11332842_5 Belongs to the eukaryotic ribosomal protein eS31 family K02977 - - 0.0000000000000000000000003327 105.0
BYD1_k127_11332842_6 Large family of predicted nucleotide-binding domains K07158 - - 0.000005945 49.0
BYD1_k127_11348364_0 PFAM ATPase, BadF BadG BcrA BcrD type - - - 1.188e-218 680.0
BYD1_k127_11348364_1 methanogenesis marker protein 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005938 433.0
BYD1_k127_11348364_2 Uncharacterized protein conserved in archaea (DUF2113) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008696 294.0
BYD1_k127_11349162_0 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003609 424.0
BYD1_k127_11349162_1 Belongs to the UPF0147 family K09721 - - 0.0000000000000000000000000000000000000000002937 162.0
BYD1_k127_11349162_2 PFAM Sjogrens syndrome scleroderma autoantigen 1 K07143 - - 0.0000000000000000001219 93.0
BYD1_k127_11349162_3 DEAD DEAH box helicase domain protein K10896 - - 0.000002057 49.0
BYD1_k127_11356749_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003631 230.0
BYD1_k127_11356749_1 Transglutaminase-like superfamily - - - 0.000000000000000000000000000000000000003532 148.0
BYD1_k127_11358113_0 Formylmethanofuran dehydrogenase, subunit B K00201 - 1.2.7.12 7.83e-242 752.0
BYD1_k127_11358113_1 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K14106 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004613 580.0
BYD1_k127_11358113_2 4Fe-4S dicluster domain K11260,K14107 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 322.0
BYD1_k127_11358113_3 PFAM molydopterin dinucleotide-binding region K00203 GO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016651,GO:0048037,GO:0051536,GO:0051540,GO:0055114 1.2.7.12 0.000000000000000000000000000000000000000000001165 168.0
BYD1_k127_11358113_4 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K14105 - - 0.0000000000651 62.0
BYD1_k127_11358867_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 561.0
BYD1_k127_11358867_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000642 236.0
BYD1_k127_11358898_0 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 456.0
BYD1_k127_11358898_1 PFAM CRISPR-associated protein TM1812 K19143 - - 0.0000000000000000000000000000000000000000000000000000000004223 210.0
BYD1_k127_11367531_0 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005869 255.0
BYD1_k127_11367531_1 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000362 135.0
BYD1_k127_11382159_0 Domain of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 357.0
BYD1_k127_11385281_0 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 310.0
BYD1_k127_11385281_1 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, delta subunit K00171,K00188 - 1.2.7.1,1.2.7.7 0.000000000000000000000000000000000000000001969 156.0
BYD1_k127_11403239_0 N-6 DNA Methylase - - - 0.0000000000000000009777 87.0
BYD1_k127_11403239_1 COG1002 Type II restriction enzyme, methylase subunits - - - 0.00002557 46.0
BYD1_k127_11409075_0 - - - - 0.00000000000000000000000000000003741 126.0
BYD1_k127_11472953_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 317.0
BYD1_k127_11472953_1 Bacterial regulatory proteins, tetR family K03577 - - 0.00000000000000000000000000000000000000000000000000000000000000000001202 238.0
BYD1_k127_11484897_0 Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules K04483 - - 1.733e-226 705.0
BYD1_k127_11484897_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 1.248e-223 699.0
BYD1_k127_11484897_2 PFAM Aminotransferase class I and II K10206 - 2.6.1.83 6.32e-216 673.0
BYD1_k127_11484897_3 PFAM nucleic acid binding, OB-fold, tRNA helicase-type K07466 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 533.0
BYD1_k127_11484897_4 EamA-like transporter family - - - 0.00000000000000000000000007001 111.0
BYD1_k127_11487390_0 Uncharacterised ACR (DUF711) K09157 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 464.0
BYD1_k127_11487390_1 Belongs to the UPF0237 family K07166 - - 0.000000000000000000000000000000000000000000001432 166.0
BYD1_k127_11487423_0 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.0000000000000000000000000000000000000000000000000000000000003464 217.0
BYD1_k127_11487423_1 Response regulator, receiver K17763 - - 0.0000000000000000000001015 100.0
BYD1_k127_11487423_2 - - - - 0.000000000000000003362 97.0
BYD1_k127_1149336_0 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000004848 157.0
BYD1_k127_1149336_1 PFAM Sulfate transporter antisigma-factor antagonist STAS K04749 - - 0.00000000000000000000000000006655 119.0
BYD1_k127_1149336_2 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000001659 110.0
BYD1_k127_11513596_0 COG2233 Xanthine uracil permeases K02824,K03458 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003323 537.0
BYD1_k127_11513596_1 Kelch repeat - - - 0.00000009085 64.0
BYD1_k127_1151514_0 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005198 264.0
BYD1_k127_1151514_1 PFAM chaperonin Cpn60 TCP-1 K22447 - - 0.0000000000000000000000000000000000000000000000000000000000001132 214.0
BYD1_k127_1151514_2 PFAM chemotaxis sensory transducer K03406 - - 0.000001696 50.0
BYD1_k127_11517551_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 2.998e-233 731.0
BYD1_k127_11517551_1 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000009645 101.0
BYD1_k127_11517551_2 O-methyltransferase K15256 - - 0.0000000000000009978 77.0
BYD1_k127_11522099_0 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 398.0
BYD1_k127_11522099_1 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000075 309.0
BYD1_k127_11522099_2 cellulose binding - - - 0.0000000000000000000000008448 121.0
BYD1_k127_11545210_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily K05830 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 423.0
BYD1_k127_11545210_1 - - - - 0.0000006759 59.0
BYD1_k127_11559963_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000008885 157.0
BYD1_k127_11559963_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000006312 75.0
BYD1_k127_11562033_0 PFAM cobalamin (vitamin B12) biosynthesis CbiM protein K02007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 334.0
BYD1_k127_11562033_1 PFAM Uncharacterised protein family UPF0066 - - - 0.00000000000000000000000000000000000000000000000000002945 191.0
BYD1_k127_11562033_2 PDGLE domain K02009 - - 0.00000000000000000000000000000000000958 139.0
BYD1_k127_11562033_3 Domain of unknown function (DUF3821) - - - 0.0000000000001125 70.0
BYD1_k127_11562033_4 PQQ enzyme repeat K00114 - 1.1.2.8 0.0000001445 61.0
BYD1_k127_11569884_0 PFAM Cache, type 2 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 579.0
BYD1_k127_11569884_1 peptidase M24 - - - 0.00000000000000000000000000000000000000000003132 164.0
BYD1_k127_11582752_0 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 343.0
BYD1_k127_11582752_1 Roadblock LC7 family protein K06945,K07131 - - 0.000000000000000000000000000000000000000000000000001085 186.0
BYD1_k127_11582752_2 Protein of unknown function DUF89 K09116 - - 0.0000000000000008811 79.0
BYD1_k127_11587286_0 4-vinyl reductase, 4VR K07013 - - 0.00000000000000000000000000000000000000000000000000000000000112 214.0
BYD1_k127_11587286_1 PAS domain - - - 0.00000000000000000000000000000000000000000134 163.0
BYD1_k127_11588168_0 Cytochrome C biogenesis protein transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 333.0
BYD1_k127_11588168_1 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003011 304.0
BYD1_k127_11596462_0 PAS domain K13924 - 2.1.1.80,3.1.1.61 4.603e-320 1009.0
BYD1_k127_11596462_1 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 312.0
BYD1_k127_11596462_2 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000007349 128.0
BYD1_k127_11596462_3 Histidine kinase - - - 0.00000000000000001718 94.0
BYD1_k127_11614289_0 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000001077 222.0
BYD1_k127_11614289_1 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000398 203.0
BYD1_k127_11614289_2 Parallel beta-helix repeats - - - 0.000000000000000562 84.0
BYD1_k127_11630130_0 Domain of unknown function (DUF4277) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 544.0
BYD1_k127_11630130_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000001261 154.0
BYD1_k127_11630130_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.0000000000000000000000007017 106.0
BYD1_k127_11630130_3 PFAM response regulator receiver - - - 0.00000000000000995 78.0
BYD1_k127_11652510_0 Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules K03733,K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002708 427.0
BYD1_k127_11652510_1 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.00000000000000000000000000000000129 136.0
BYD1_k127_11652510_2 - - - - 0.00000000003018 65.0
BYD1_k127_11664398_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000001812 252.0
BYD1_k127_11664398_1 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000002151 158.0
BYD1_k127_11676781_0 4Fe-4S double cluster binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 291.0
BYD1_k127_11676781_1 transcription activator, effector binding - - - 0.000000000000000000000000000000000000000000000000000000001318 207.0
BYD1_k127_11676781_2 stage II sporulation - - - 0.0000000000000000000000000000000000003221 151.0
BYD1_k127_11677250_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 4.444e-234 729.0
BYD1_k127_11677250_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003464 561.0
BYD1_k127_11677250_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.000000000000000000000000000000000000002914 146.0
BYD1_k127_11683405_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001104 280.0
BYD1_k127_11683405_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001013 271.0
BYD1_k127_11683405_2 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000004987 207.0
BYD1_k127_11683405_3 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000000000422 194.0
BYD1_k127_11683405_4 - - - - 0.00000000000000000000000000000002038 127.0
BYD1_k127_11685399_0 COG2233 Xanthine uracil permeases K02824,K03458 - - 0.0000000000000000000000000000000000000000000000000000000000000001092 226.0
BYD1_k127_11685399_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000002223 219.0
BYD1_k127_11685399_2 COG2233 Xanthine uracil permeases K02824,K03458 - - 0.00000000000000000000000000000000000000000000000000005296 190.0
BYD1_k127_11685399_3 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase - - - 0.000000000000000000000000000000000000000004832 166.0
BYD1_k127_11685399_4 Psort location CytoplasmicMembrane, score 10.00 K02824 - - 0.00000000000000004175 84.0
BYD1_k127_11685399_5 COG2233 Xanthine uracil permeases K02824,K03458 - - 0.0000272 48.0
BYD1_k127_11686719_0 Papain family cysteine protease - - - 7.644e-223 705.0
BYD1_k127_1169544_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005069 287.0
BYD1_k127_1169544_2 PFAM PKD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000004253 221.0
BYD1_k127_11695604_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000117 548.0
BYD1_k127_11699864_0 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 341.0
BYD1_k127_11699864_1 - - - - 0.00000000000000000000000000000000000000000000000008329 185.0
BYD1_k127_11708172_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 387.0
BYD1_k127_11708172_1 extracellular matrix structural constituent - - - 0.0000000000000000000000000000000531 128.0
BYD1_k127_117142_0 Protein of unknown function DUF86 - - - 0.000000000000000000000000000000000000008309 147.0
BYD1_k127_117142_1 PFAM DNA polymerase, beta domain protein region K07075 - - 0.000000000000000000000003252 105.0
BYD1_k127_117142_2 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000000000002349 100.0
BYD1_k127_117142_3 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000002222 79.0
BYD1_k127_1172039_0 Membrane transport protein K07088 - - 0.000000000000000000000000000000000000000007011 166.0
BYD1_k127_1172039_1 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000001873 156.0
BYD1_k127_1172039_2 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.000000000000000000001488 95.0
BYD1_k127_11729211_0 Belongs to the RNA polymerase beta chain family K03045 - 2.7.7.6 1.097e-279 862.0
BYD1_k127_11729211_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 403.0
BYD1_k127_11729211_2 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03053 - 2.7.7.6 0.000000000000000000000000000000000001255 139.0
BYD1_k127_11730768_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000181 216.0
BYD1_k127_11730768_1 integral membrane protein - - - 0.000000000000000000000000000000000000000000000000000000000001563 218.0
BYD1_k127_11730768_2 - - - - 0.000000000000000001491 88.0
BYD1_k127_11730768_3 AI-2E family transporter - - - 0.00000000005895 63.0
BYD1_k127_11737456_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate - - - 5.073e-199 633.0
BYD1_k127_11739648_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000197 227.0
BYD1_k127_11739648_1 PFAM chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000001022 158.0
BYD1_k127_11742748_0 Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ) K00878 - 2.7.1.50 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002528 350.0
BYD1_k127_11742748_1 Met-10+ like-protein K15429 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000002112 232.0
BYD1_k127_11742748_2 Tetratricopeptide repeat K12600 - - 0.00000000000000000000000000000000000006721 151.0
BYD1_k127_11742748_3 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000004168 60.0
BYD1_k127_11744795_0 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 483.0
BYD1_k127_11769873_0 Protein of unknown function (DUF1016) - - - 0.00000000000000000000000000000000000000000000000000000001263 201.0
BYD1_k127_11801801_0 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.000000000000000000000000000000000000000000000000000001043 202.0
BYD1_k127_11801801_1 SpoVT / AbrB like domain - - - 0.0000000000000000000000385 102.0
BYD1_k127_11801801_2 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.0001616 46.0
BYD1_k127_11805630_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006173 407.0
BYD1_k127_11805630_1 PFAM Protein phosphatase K20074 - 3.1.3.16 0.0000000000000000000000000000000000461 136.0
BYD1_k127_11806111_0 PFAM Methyl-coenzyme M reductase, beta subunit K00401 - 2.8.4.1 4.742e-247 766.0
BYD1_k127_11806111_1 PFAM Methyl-coenzyme M reductase gamma subunit K00402 - 2.8.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 483.0
BYD1_k127_11806111_2 PFAM Methyl-coenzyme M reductase operon protein C K03421 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000029 396.0
BYD1_k127_11806111_3 PFAM Methyl-coenzyme M reductase, protein D K03422 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008381 273.0
BYD1_k127_11806111_4 Reduction of methyl-coenzyme M (2-(methylthio) ethanesulfonic acid) with 7-mercaptoheptanoylthreonine phosphate to methane and a heterodisulfide K00399 - 2.8.4.1 0.0000000000000000000000000000000000000002965 149.0
BYD1_k127_11810381_0 PFAM glycosyl transferase, group 1 - - - 3.269e-211 661.0
BYD1_k127_11810381_1 Glycogen debranching enzyme N terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001197 265.0
BYD1_k127_11810381_2 Glycosyl hydrolase family 57 K07405 - 3.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000006122 255.0
BYD1_k127_11810381_3 Glycogen debranching enzyme N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000008012 224.0
BYD1_k127_11816115_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 6.957e-210 657.0
BYD1_k127_11816115_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001335 580.0
BYD1_k127_11818804_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.6e-293 909.0
BYD1_k127_11818804_1 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001916 273.0
BYD1_k127_11818804_2 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000001375 63.0
BYD1_k127_11834144_0 PFAM Beta propeller domain K14475 - - 2.58e-231 735.0
BYD1_k127_11834144_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008069 327.0
BYD1_k127_11836448_0 TIGRFAM PAS sensor protein K02485 - - 0.0000000000000000000000000000000000000000000000000000000003776 213.0
BYD1_k127_11836448_1 NMT1-like family K02051,K15551 - - 0.000000000000000001449 98.0
BYD1_k127_11842990_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002308 554.0
BYD1_k127_11842990_1 PFAM ABC transporter related K02003 - - 0.000000000000000004263 84.0
BYD1_k127_11843729_0 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 387.0
BYD1_k127_11843729_1 Short repeat of unknown function (DUF308) - - - 0.000000000000000000000000000002049 127.0
BYD1_k127_11843729_2 Siroheme synthase K02304 GO:0003674,GO:0003824,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0019354,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043115,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,4.99.1.4 0.000000000001341 68.0
BYD1_k127_11843729_3 Belongs to the WrbA family K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.0000000005149 61.0
BYD1_k127_11846364_0 Belongs to the Pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 388.0
BYD1_k127_11846364_1 Papain-like cysteine protease AvrRpt2 - - - 0.0000000000000000000000000000000000000001237 159.0
BYD1_k127_11846364_2 Histidine kinase-like ATPases - - - 0.0000000003479 67.0
BYD1_k127_11847615_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000001332 176.0
BYD1_k127_11847615_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000008526 151.0
BYD1_k127_11854007_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 7.8e-241 751.0
BYD1_k127_11858430_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000005367 237.0
BYD1_k127_11864879_0 PAC2 family K07159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 398.0
BYD1_k127_11864879_1 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.000000000000000002797 84.0
BYD1_k127_11864879_2 PHP C-terminal domain protein - - - 0.00000000002511 64.0
BYD1_k127_11871848_0 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 586.0
BYD1_k127_11871848_1 PFAM TOBE domain K02019 - - 0.000000000000000000000000001689 113.0
BYD1_k127_11871848_3 Periplasmic binding protein K02016 - - 0.00000000000008574 72.0
BYD1_k127_11872292_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 6.46e-217 677.0
BYD1_k127_11872292_1 TIGRFAM PAS sensor protein K02485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003184 355.0
BYD1_k127_11879512_0 amine dehydrogenase activity - - - 0.00000000000005012 80.0
BYD1_k127_11879512_1 COG1520 FOG WD40-like repeat - - - 0.0000005783 57.0
BYD1_k127_11882555_0 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 382.0
BYD1_k127_11882555_1 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 320.0
BYD1_k127_11882555_2 Protein of unknown function (DUF3147) - - - 0.00000000000000000004628 90.0
BYD1_k127_11886245_0 Pas domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 458.0
BYD1_k127_11889066_0 methyl-accepting chemotaxis protein K03406 - - 9.596e-224 714.0
BYD1_k127_11889066_1 Transport of potassium into the cell K03549 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 538.0
BYD1_k127_11889066_2 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000003852 198.0
BYD1_k127_11889066_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0000000000000000000006325 96.0
BYD1_k127_11889333_0 PFAM Aldehyde dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 409.0
BYD1_k127_11889333_1 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000002886 233.0
BYD1_k127_11889333_2 protein with SCP PR1 domains - - - 0.0000000000000000000000000000000000000000000000000000000000000002565 231.0
BYD1_k127_11889333_4 Helix-turn-helix domain - - - 0.0000000000000000000000000000005022 134.0
BYD1_k127_11892759_0 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004327 292.0
BYD1_k127_11907839_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000522 300.0
BYD1_k127_11907839_1 Subtilase family K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000005562 202.0
BYD1_k127_11907839_2 Domain of unknown function (DUF4389) - - - 0.00000000000000000000000000000000000000001194 155.0
BYD1_k127_11907839_3 - - - - 0.0000000000000000000000000000000004128 138.0
BYD1_k127_11907839_4 Archaeal Type IV pilin, N-terminal - - - 0.000000000000001002 88.0
BYD1_k127_11908959_0 PFAM DNA alkylation repair enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006158 260.0
BYD1_k127_11908959_1 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000001545 153.0
BYD1_k127_11908959_2 Alternative locus ID - - - 0.000000000000000000000000000000000009612 154.0
BYD1_k127_11915670_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001137 471.0
BYD1_k127_11915670_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001269 235.0
BYD1_k127_11915670_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.00000000000000000002618 91.0
BYD1_k127_11918704_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 306.0
BYD1_k127_11933325_0 Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single- stranded endonuclease activity K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007864 258.0
BYD1_k127_11933325_1 ribosomal rna small subunit methyltransferase - - - 0.00000000000000000000000000000006543 131.0
BYD1_k127_11933325_2 Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50 Mre11 complex K03546 - - 0.000000000000000000345 94.0
BYD1_k127_11934543_0 COG2202 FOG PAS PAC domain - - - 0.000000000000000000000000001333 124.0
BYD1_k127_11934543_1 Response regulator receiver - - - 0.000003084 59.0
BYD1_k127_11959399_0 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 384.0
BYD1_k127_11959399_1 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.0000000000000000000000000000000000000002743 151.0
BYD1_k127_11963293_0 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 6.708e-206 645.0
BYD1_k127_11963293_1 PFAM aminotransferase class V - - - 6.957e-200 627.0
BYD1_k127_11963293_2 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 455.0
BYD1_k127_11963293_3 TIGRFAM riboflavin synthase K00793 - 2.5.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 293.0
BYD1_k127_11963293_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000000000000000000000000000000000000000001244 249.0
BYD1_k127_11963293_5 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000002346 186.0
BYD1_k127_11970192_1 peptidase S8 and S53, subtilisin, kexin, sedolisin K06877 - - 0.00000000000000000000000000000000000000002725 155.0
BYD1_k127_11970192_2 SMART GGDEF domain containing protein - - - 0.0000000000000000003696 91.0
BYD1_k127_11982223_0 Histidine kinase - - - 0.000000000000000000000000000000000000000433 166.0
BYD1_k127_11986968_0 hydrophobe amphiphile efflux-3 (HAE3) family K07003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000979 386.0
BYD1_k127_11986968_1 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 375.0
BYD1_k127_11989082_0 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.0000000000000000000000000000000000842 138.0
BYD1_k127_11989082_1 Domain of unknown function (DUF3821) - - - 0.0000000000000000000000000000004831 124.0
BYD1_k127_11995049_0 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000001787 199.0
BYD1_k127_11995049_1 - K07112 - - 0.0000000000000000000000000000000000000004575 153.0
BYD1_k127_11995049_2 redox protein regulator of disulfide bond formation K04085 GO:0008150,GO:0009987,GO:0019725,GO:0042592,GO:0048878,GO:0055082,GO:0065007,GO:0065008 - 0.0000000000000000001093 90.0
BYD1_k127_12010729_0 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000002889 248.0
BYD1_k127_12010729_1 protein contain chitin-binding domain type 3 K01183 - 3.2.1.14 0.0000000000000709 83.0
BYD1_k127_1202055_0 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 369.0
BYD1_k127_1202055_1 Sulphur transport K07112 - - 0.000000000000000000000000000000000000000000000000000000000000000001734 230.0
BYD1_k127_1202055_2 Uncharacterized protein conserved in bacteria (DUF2252) - - - 0.0000000000000000000000000000000000000003485 153.0
BYD1_k127_1202055_3 PFAM Yip1 domain - - - 0.0000000000000001402 88.0
BYD1_k127_1202055_4 Tetratricopeptide repeat K12600 - - 0.00000000000006003 79.0
BYD1_k127_12034839_0 Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase K00192 - 1.2.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 588.0
BYD1_k127_12034839_1 PFAM Cobyrinic acid a,c-diamide synthase K07321 - - 0.00000000000000000001551 92.0
BYD1_k127_12041552_0 Phospholipid methyltransferase - - - 0.000000000000000000000000001284 117.0
BYD1_k127_12041552_1 PFAM GtrA family protein - - - 0.0000000000000000000000007529 108.0
BYD1_k127_12043446_0 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000003025 191.0
BYD1_k127_12051409_0 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 368.0
BYD1_k127_12051409_1 Acetyl xylan esterase (AXE1) K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001201 252.0
BYD1_k127_12051409_2 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000001679 243.0
BYD1_k127_12051409_3 PFAM GPR1 FUN34 yaaH family K07034 - - 0.000000000000000000000000000000000000000000000000000000000000000001048 230.0
BYD1_k127_12051409_4 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000007811 211.0
BYD1_k127_12055630_0 Pas domain K00974,K02485 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 596.0
BYD1_k127_12069506_0 SMART Elongator protein 3 MiaB NifB K06936 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002101 325.0
BYD1_k127_12069506_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003763 271.0
BYD1_k127_12073199_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001646 601.0
BYD1_k127_12073199_1 With S4 and S12 plays an important role in translational accuracy K02988 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 395.0
BYD1_k127_12073199_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.0000000000000000000000000000000000000000000000000000000000000002076 222.0
BYD1_k127_12073199_11 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000000000000000000000000000000000000000003963 211.0
BYD1_k127_12073199_12 PFAM Ribosomal protein K02912 - - 0.00000000000000000000000000000000000000000000000000000000000887 209.0
BYD1_k127_12073199_13 One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02895 - - 0.0000000000000000000000000000000000000000000000000000002984 195.0
BYD1_k127_12073199_14 binds to the 23S rRNA K02876 - - 0.0000000000000000000000000000000000000000000000000000003383 196.0
BYD1_k127_12073199_15 Binds 16S rRNA, required for the assembly of 30S particles K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008270,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046872,GO:0046914,GO:1990904 - 0.00000000000000000000000007414 107.0
BYD1_k127_12073199_16 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000000000000007792 107.0
BYD1_k127_12073199_17 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03538 GO:0000172,GO:0000966,GO:0001682,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005732,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0022613,GO:0030677,GO:0032991,GO:0033204,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1901363,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.00000000000000000000000427 105.0
BYD1_k127_12073199_2 Belongs to the eukaryotic ribosomal protein eS4 family K02987 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006498 382.0
BYD1_k127_12073199_3 Binds the lower part of the 30S subunit head K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001888 306.0
BYD1_k127_12073199_4 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 297.0
BYD1_k127_12073199_5 TIGRFAM ribosomal protein L30P K02907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 284.0
BYD1_k127_12073199_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001801 277.0
BYD1_k127_12073199_7 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008098 268.0
BYD1_k127_12073199_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007125 252.0
BYD1_k127_12073199_9 binds to the 23S rRNA K02885 - - 0.00000000000000000000000000000000000000000000000000000000000000000002556 234.0
BYD1_k127_12089886_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 1.639e-299 923.0
BYD1_k127_12089886_1 Catalyzes the condensation of pyruvate and acetyl- coenzyme A to form (R)-citramalate K09011 - 2.3.1.182 0.0008195 42.0
BYD1_k127_12093458_0 peptidase C26 K07010 - - 0.0000000000000000421 89.0
BYD1_k127_12116188_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 425.0
BYD1_k127_12117796_0 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000241 277.0
BYD1_k127_1212053_0 Transcriptional regulator, TrmB - - - 0.00000000000000000000000000000004593 131.0
BYD1_k127_1212053_1 - - - - 0.000000000000001736 82.0
BYD1_k127_1212053_2 Small multi-drug export protein - - - 0.0000000002398 64.0
BYD1_k127_12124870_0 cheY-homologous receiver domain - - - 9.22e-212 691.0
BYD1_k127_12130991_0 SMART PAS domain containing protein K03406 - - 5e-324 1030.0
BYD1_k127_12130991_2 TIGRFAM YD repeat protein K21449 - - 0.0000000000000000001413 98.0
BYD1_k127_12130991_3 transcriptional regulator, XRE family - - - 0.000001791 50.0
BYD1_k127_12134710_0 methyl-accepting chemotaxis protein K03406 - - 3.982e-288 892.0
BYD1_k127_12134710_1 ATP-binding region, ATPase domain protein K03407 - 2.7.13.3 1.654e-220 706.0
BYD1_k127_12135805_0 His Kinase A (phosphoacceptor) domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009314 329.0
BYD1_k127_12142376_0 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006188 558.0
BYD1_k127_12142376_1 PFAM ribonuclease II K01147 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000002101 265.0
BYD1_k127_12150896_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 424.0
BYD1_k127_12152448_0 PFAM cobalamin synthesis protein P47K - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 341.0
BYD1_k127_12152448_1 PFAM ABC transporter related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004367 299.0
BYD1_k127_12152448_2 PFAM extracellular solute-binding protein family 1 K02020,K03750,K07219 - 2.10.1.1 0.00000000000000000000000000000000000000000004397 166.0
BYD1_k127_12152448_3 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000008015 153.0
BYD1_k127_12163665_0 defense response to virus K07061 - - 0.0000000000000000000000000000000000000000000000000000000000007817 220.0
BYD1_k127_12163665_1 - - - - 0.0000000000000000000000000000000000001257 145.0
BYD1_k127_12163665_2 - K02478 - 2.7.13.3 0.00000000000000000000000000005617 120.0
BYD1_k127_12163665_3 Prokaryotic RING finger family 2 - - - 0.0000000000000000000000000001643 118.0
BYD1_k127_12163665_4 - K02478 - 2.7.13.3 0.0000000000000007035 81.0
BYD1_k127_12163665_5 - K02478 - 2.7.13.3 0.0000000000001122 73.0
BYD1_k127_12168062_0 Peptidase family C69 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005438 578.0
BYD1_k127_12168062_1 Sulfate permease K03321 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 331.0
BYD1_k127_12189082_0 CHASE4 domain - - - 0.00001363 58.0
BYD1_k127_12192202_0 Psort location CytoplasmicMembrane, score 10.00 K03458 - - 0.000000000000000000000000000002627 128.0
BYD1_k127_12200590_0 - - - - 0.0000000000000000000000000000000000000000000000004989 182.0
BYD1_k127_12200590_1 Serine aminopeptidase, S33 K01259 - 3.4.11.5 0.0000000000000000000000000000000000000001653 153.0
BYD1_k127_12205835_0 Small multi-drug export protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008994 243.0
BYD1_k127_12205835_1 Catalyzes the condensation of 4-aminobenzoate (pABA) with 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta-ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P) K06984 - 2.4.2.54 0.000000000000000000000000000000000009033 137.0
BYD1_k127_12205835_2 SNARE associated Golgi protein K03975 - - 0.000000000000000006309 88.0
BYD1_k127_12205962_0 HAMP domain K03406,K07652 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 346.0
BYD1_k127_12205962_1 TIGRFAM phosphate binding protein K02040 - - 0.000000000000006772 74.0
BYD1_k127_12206943_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999,K11954 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008736 444.0
BYD1_k127_12213871_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.598e-211 662.0
BYD1_k127_12213871_1 Alginate O-acetylation protein - - - 0.000000001209 63.0
BYD1_k127_1228344_0 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005745 295.0
BYD1_k127_1228344_1 - - - - 0.0000000000000000000000000000000000000000001125 164.0
BYD1_k127_1228344_2 Transcriptional regulator, TrmB - - - 0.000000000000000000000000000000027 129.0
BYD1_k127_1229079_0 extracellular matrix structural constituent K01385 - 3.4.23.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 408.0
BYD1_k127_1229079_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000001104 194.0
BYD1_k127_123960_0 PFAM ATP-binding region, ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 340.0
BYD1_k127_123960_1 COG0025 NhaP-type Na H and K H K03316 - - 0.000000000000000000000000000000000000000000000000000319 191.0
BYD1_k127_1269833_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000002195 217.0
BYD1_k127_1272403_0 GHKL domain K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000001715 253.0
BYD1_k127_1272403_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000009026 49.0
BYD1_k127_1277825_0 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03242 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000098 433.0
BYD1_k127_1277825_1 Large family of predicted nucleotide-binding domains K07158 - - 0.00000000000000000000000000000001365 130.0
BYD1_k127_129206_0 YcaO cyclodehydratase, ATP-ad Mg2+-binding K09136 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 574.0
BYD1_k127_129206_1 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000004012 165.0
BYD1_k127_129206_2 Protein of unknown function (DUF2769) - - - 0.0000000000000000000000000000000000000727 143.0
BYD1_k127_129206_3 TfuA-like protein - - - 0.00000000000000000000000000004941 125.0
BYD1_k127_129206_4 Molybdopterin converting factor, small subunit K03636 - - 0.00000000000000001616 85.0
BYD1_k127_129206_5 - - - - 0.000000003939 58.0
BYD1_k127_1294684_0 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 368.0
BYD1_k127_1294684_1 response regulator, receiver K07668,K07669 - - 0.000000000000000000000000000000000000000000000000001604 184.0
BYD1_k127_1294684_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000006082 149.0
BYD1_k127_1295054_0 Anaphase-promoting complex, cyclosome, subunit 3 - - - 0.000000004551 68.0
BYD1_k127_1308915_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000003867 204.0
BYD1_k127_1308915_1 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000000003705 141.0
BYD1_k127_1308915_2 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000003996 114.0
BYD1_k127_1308915_3 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000001669 55.0
BYD1_k127_1336996_0 PFAM Tetratricopeptide repeat - - - 0.000000000000000000000000002663 126.0
BYD1_k127_1336996_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000000000000182 109.0
BYD1_k127_1336996_2 PFAM transcriptional regulator PadR family protein - - - 0.00000002273 56.0
BYD1_k127_1372492_0 PFAM beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 340.0
BYD1_k127_1372492_1 Desulfoferrodoxin ferrous iron-binding K05919 - 1.15.1.2 0.00000000000000000000000000000008356 127.0
BYD1_k127_1390233_0 Papain family cysteine protease K11751,K14647 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000002844 277.0
BYD1_k127_1390233_1 Archaeal Type IV pilin, N-terminal - - - 0.00000000000000004168 94.0
BYD1_k127_1390233_2 PFAM PKD domain containing protein - - - 0.0000000003493 72.0
BYD1_k127_139083_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000001366 229.0
BYD1_k127_139083_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000001746 107.0
BYD1_k127_143020_0 Hydantoinase/oxoprolinase N-terminal region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004059 584.0
BYD1_k127_143020_1 Catalyzes the condensation of 4-aminobenzoate (pABA) with 5-phospho-alpha-D-ribose 1-diphosphate (PRPP) to produce beta-ribofuranosylaminobenzene 5'-phosphate (beta-RFA-P) K06984 - 2.4.2.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005729 289.0
BYD1_k127_143020_2 Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002117 243.0
BYD1_k127_1434626_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 439.0
BYD1_k127_1434626_1 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658 - 4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000001237 258.0
BYD1_k127_1434626_2 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000001252 138.0
BYD1_k127_1435751_0 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 598.0
BYD1_k127_1435751_1 sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3' cyclic phosphate and 5'-OH termini. Recognizes a pseudosymmetric substrate in which 2 bulged loops of 3 bases are separated by a stem of 4 bp K01170 - 4.6.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 462.0
BYD1_k127_1441319_0 FIST C domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001775 266.0
BYD1_k127_1468378_0 - - - - 0.00000000000000000000000000000005222 133.0
BYD1_k127_1471698_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001913 487.0
BYD1_k127_1471698_1 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000007069 205.0
BYD1_k127_1473475_0 Belongs to the PdaD family K02626 - 4.1.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003699 269.0
BYD1_k127_1473475_1 Carbamoyl-phosphate synthase, small chain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000002566 247.0
BYD1_k127_1483276_0 toxin activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002627 542.0
BYD1_k127_1483276_1 Mediates influx of magnesium ions K03284 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 344.0
BYD1_k127_148505_0 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001641 263.0
BYD1_k127_148505_1 rRNA small subunit methyltransferase G - - - 0.00000000000006988 75.0
BYD1_k127_1517408_0 plastoquinone (Complex I) K12141 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 578.0
BYD1_k127_1517408_1 Hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007951 252.0
BYD1_k127_1517408_2 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.000000000000000000001243 100.0
BYD1_k127_1517408_3 NADH dehydrogenase - - - 0.000000000000001696 78.0
BYD1_k127_1519633_0 Domain of unknown function (DUF3821) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 307.0
BYD1_k127_1519633_1 - - - - 0.00000000003237 66.0
BYD1_k127_1521524_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 418.0
BYD1_k127_1521524_1 PAC2 family K06869 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009974 371.0
BYD1_k127_1521524_2 - - - - 0.00000000000000000000000000000000000000009053 153.0
BYD1_k127_1521524_3 Protein of unknown function (DUF473) K09135 - - 0.000000000018 65.0
BYD1_k127_1538713_0 COG0210 Superfamily I DNA and RNA helicases K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003989 307.0
BYD1_k127_1550544_0 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000003126 172.0
BYD1_k127_1550544_1 COG1199 Rad3-related DNA helicases - - - 0.00000258 60.0
BYD1_k127_1550544_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0009721 46.0
BYD1_k127_1564898_0 Catalyzes the reversible transfer of a formyl group from formylmethanofuran (formyl-MFR) to tetrahydromethanopterin (H(4)MPT) so as to produce 5-formyl tetrahydromethanopterin (5- formyl-H(4)MPT) and methanofuran (MFR) K00672 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.3.1.101 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 539.0
BYD1_k127_1564898_1 - - - - 0.00000000000000000000000000000000000000000000000000000000002489 210.0
BYD1_k127_1564898_2 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing K00123,K00367,K00372,K08356 - 1.17.1.9,1.20.2.1,1.20.9.1,1.7.7.2 0.00000000000000000000000000000000000000000000000000004308 192.0
BYD1_k127_1578648_0 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 395.0
BYD1_k127_1578648_1 Chagasin family peptidase inhibitor I42 K14475 - - 0.000000000000000000000000000000001696 135.0
BYD1_k127_1578648_2 AI-2E family transporter - - - 0.000002114 51.0
BYD1_k127_1581871_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 450.0
BYD1_k127_1581871_1 PFAM ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 328.0
BYD1_k127_1603945_0 homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 504.0
BYD1_k127_1603945_1 methanogenesis marker protein 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 355.0
BYD1_k127_1603945_2 amino acid-binding ACT domain protein - - - 0.00000000000000000000000000000000000000000000003903 171.0
BYD1_k127_1603945_3 peptidyl-prolyl cis-trans isomerase K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000005019 174.0
BYD1_k127_1618138_0 An RNase that has 5'-3' exonuclease activity. May be involved in RNA degradation K12574 - - 7.622e-265 818.0
BYD1_k127_1618138_1 Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP) K01823 - 5.3.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000485 514.0
BYD1_k127_1618138_2 Catalyzes the phosphorylation of (R)-mevalonate (MVA) to (R)-mevalonate 5-phosphate (MVAP). Functions in the mevalonate (MVA) pathway leading to isopentenyl diphosphate (IPP), a key precursor for the biosynthesis of isoprenoid compounds such as archaeal membrane lipids K00869 - 2.7.1.36 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 497.0
BYD1_k127_1618138_3 Belongs to the FPP GGPP synthase family K13787 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 459.0
BYD1_k127_1618138_4 Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids K06981 - 2.7.4.26 0.0000000000000000000000000000000000000000000000000001956 194.0
BYD1_k127_1618138_5 Belongs to the MEMO1 family K06990 - - 0.0000000000000002158 79.0
BYD1_k127_1619885_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 515.0
BYD1_k127_1619885_1 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000007477 213.0
BYD1_k127_1619885_2 extracellular matrix structural constituent - - - 0.0000000000000004199 79.0
BYD1_k127_1646743_0 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 602.0
BYD1_k127_1646743_1 PFAM DNA polymerase beta domain protein region K07075 - - 0.000000000000000000000000000000304 126.0
BYD1_k127_1646743_2 Protein of unknown function DUF86 - - - 0.0000000000000000000008823 96.0
BYD1_k127_1646897_0 Short repeat of unknown function (DUF308) - - - 0.00000000000000000000000000000006505 131.0
BYD1_k127_1646897_1 Serine threonine protein kinase - - - 0.000000001763 68.0
BYD1_k127_1659436_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 473.0
BYD1_k127_1659436_1 PFAM Aminotransferase class I and II K04720 - 4.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 299.0
BYD1_k127_1659436_2 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain - - - 0.00000000000000000000006852 98.0
BYD1_k127_167245_0 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004159 361.0
BYD1_k127_167245_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002657 297.0
BYD1_k127_167245_2 Domain of unknown function (DUF4177) - - - 0.0000000000000000976 79.0
BYD1_k127_1682870_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.0 1233.0
BYD1_k127_1694761_0 PFAM Exonuclease VII large subunit K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 441.0
BYD1_k127_1694761_1 PFAM Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000001114 104.0
BYD1_k127_1700005_0 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 8.737e-244 758.0
BYD1_k127_1700005_1 AMP-binding enzyme C-terminal domain K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 425.0
BYD1_k127_1700005_2 TIGRFAM intracellular protease, PfpI family K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000002232 245.0
BYD1_k127_1700005_3 PFAM amino acid-binding ACT domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000001284 229.0
BYD1_k127_1700005_4 - - - - 0.00000000000000000000000003535 111.0
BYD1_k127_1701166_0 Belongs to the TPP enzyme family K00158 - 1.2.3.3 1.002e-263 824.0
BYD1_k127_1701166_1 ATP-NAD AcoX kinase K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 429.0
BYD1_k127_1701166_2 aromatic amino acid beta-eliminating lyase threonine aldolase K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000006229 175.0
BYD1_k127_1701166_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 0.00000000000000000000000000000009864 124.0
BYD1_k127_1720376_0 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 321.0
BYD1_k127_1720376_1 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000000000000001198 129.0
BYD1_k127_1723865_0 Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella K07324,K07325 GO:0005575,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.0000000000000000000000000000000000000000002729 163.0
BYD1_k127_1723865_1 Phenazine biosynthesis-like protein - - - 0.0000000000000000000000000000000003945 137.0
BYD1_k127_1723865_2 Cupin - - - 0.0000000000000000000008152 99.0
BYD1_k127_1723865_3 Short repeat of unknown function (DUF308) - - - 0.000000000000001155 79.0
BYD1_k127_1728462_0 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000002295 181.0
BYD1_k127_174399_0 - - - - 0.00000000000000000000000000002226 122.0
BYD1_k127_1797445_0 Rhodanese-like domain K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002532 287.0
BYD1_k127_1797445_1 COG1002 Type II restriction enzyme, methylase subunits K07317 - 2.1.1.72 0.0000000000000000000000000000000000000000001657 182.0
BYD1_k127_1797445_2 Thioredoxin K03671 - - 0.0000000000000000000000000000000000002151 143.0
BYD1_k127_1806520_0 response regulator, receiver K03413 - - 0.00000000000000000000000000000000000000000000000004144 181.0
BYD1_k127_1806520_1 Tetratricopeptide repeat - - - 0.0000000000000000000000009219 115.0
BYD1_k127_1821877_0 ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000005551 239.0
BYD1_k127_1821877_1 Transposase DDE domain - - - 0.000000000000000000000000000000000000000000000000003186 184.0
BYD1_k127_1834411_0 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient - - - 0.000000000000000000000000000000000000000000000000000000000000000000005567 241.0
BYD1_k127_1834411_1 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000000001378 189.0
BYD1_k127_1838229_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily K01845 - 5.4.3.8 1.224e-197 623.0
BYD1_k127_1838229_1 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02303 GO:0003674,GO:0003824,GO:0004851,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008757,GO:0009058,GO:0009987,GO:0016740,GO:0016741,GO:0018130,GO:0019354,GO:0019438,GO:0032259,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007271 354.0
BYD1_k127_1838229_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 315.0
BYD1_k127_1838229_4 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000002347 166.0
BYD1_k127_1839372_0 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 423.0
BYD1_k127_1839372_1 PFAM GTP-binding protein HSR1-related K06883 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 354.0
BYD1_k127_1839372_2 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009579 296.0
BYD1_k127_1839372_3 Uncharacterized protein conserved in archaea (DUF2073) K09743 - - 0.00000000000000000000000000000000000000000000000000002642 190.0
BYD1_k127_1839372_4 Zn-ribbon containing protein K00937,K07163 - 2.7.4.1 0.000000000000003857 81.0
BYD1_k127_1842419_0 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000009142 232.0
BYD1_k127_1842419_1 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000006846 100.0
BYD1_k127_1846593_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 1.727e-313 966.0
BYD1_k127_1846593_1 Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis K18933 - 4.1.1.11,4.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000837 419.0
BYD1_k127_1848744_0 - - - - 0.00000000001647 76.0
BYD1_k127_1853185_0 Molybdate transporter of MFS superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 327.0
BYD1_k127_1853185_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K06857 - 3.6.3.55 0.00000001019 57.0
BYD1_k127_1857550_0 PGAP1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000005468 218.0
BYD1_k127_1857550_1 cog1234, metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.00000000000000000000000009866 113.0
BYD1_k127_1861120_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001425 276.0
BYD1_k127_1861120_1 - - - - 0.0000000000000000002331 90.0
BYD1_k127_1864899_0 protein conserved in archaea - - - 0.000000000000000000000000000000000000000001295 165.0
BYD1_k127_1864899_1 APHP domain protein - - - 0.000000001824 65.0
BYD1_k127_1870284_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 3.55e-224 722.0
BYD1_k127_1890013_0 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 502.0
BYD1_k127_1890013_1 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004788 348.0
BYD1_k127_1890013_2 CoA-substrate-specific enzyme activase - - - 0.00000000000000000000000000000000000000000000000000000003999 205.0
BYD1_k127_1892256_0 Belongs to the TCP-1 chaperonin family K22447 - - 6.626e-262 814.0
BYD1_k127_1892256_1 Belongs to the purine pyrimidine phosphoribosyltransferase family K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 312.0
BYD1_k127_1892256_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000003734 257.0
BYD1_k127_1892256_3 PIN domain of ribonuclease K07060 - - 0.000000000000000000000000000000000000000000000001244 180.0
BYD1_k127_1892256_4 - - - - 0.0000000001997 68.0
BYD1_k127_1893873_0 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing K00123,K00367,K00372,K08356 - 1.17.1.9,1.20.2.1,1.20.9.1,1.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002672 542.0
BYD1_k127_1931983_0 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 3.57e-211 663.0
BYD1_k127_1931983_1 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 538.0
BYD1_k127_1931983_2 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002902 469.0
BYD1_k127_1931983_3 Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis-dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3- dehydroshikimate K03785 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000006521 250.0
BYD1_k127_1944334_0 Nitrite and sulphite reductase 4Fe-4S - GO:0003674,GO:0003824,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016002,GO:0016491,GO:0016667,GO:0016673,GO:0019419,GO:0044237,GO:0050311,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000006399 198.0
BYD1_k127_1944334_1 Subtilase family K14645 GO:0005575,GO:0005576 - 0.00000000000000246 81.0
BYD1_k127_1946106_0 - - - - 0.0000000007761 65.0
BYD1_k127_1946106_1 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.0001541 48.0
BYD1_k127_195491_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 606.0
BYD1_k127_195491_1 PFAM Radical SAM domain protein K06871 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 606.0
BYD1_k127_195491_2 COG1361 S-layer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 575.0
BYD1_k127_195491_3 ATP-binding region, ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 462.0
BYD1_k127_195491_4 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 386.0
BYD1_k127_195491_6 Uracil DNA glycosylase superfamily K03649 GO:0003674,GO:0003824,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097507,GO:0140097,GO:1901360 3.2.2.28 0.000000000000000000000000000000000005066 143.0
BYD1_k127_195491_7 alcohol dehydrogenase - - - 0.0000000003574 62.0
BYD1_k127_1957381_0 Arsenical pump membrane protein K03893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 497.0
BYD1_k127_2010338_0 nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008268 276.0
BYD1_k127_2010338_1 NAD(P)H dehydrogenase (quinone) K00355 - 1.6.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000431 259.0
BYD1_k127_2010338_2 NUDIX domain K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000002861 203.0
BYD1_k127_2010338_4 Cyclin-dependent kinase inhibitor 3 (CDKN3) - - - 0.000000001181 61.0
BYD1_k127_2041371_0 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009152 276.0
BYD1_k127_2041371_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001737 266.0
BYD1_k127_2041371_2 zinc finger, SWIM - - - 0.000000000000000000000000000000000000005564 148.0
BYD1_k127_2047828_0 - - - - 0.000000000000246 79.0
BYD1_k127_2049377_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K09759 - 6.1.1.23 5.597e-246 763.0
BYD1_k127_2049377_1 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008998 351.0
BYD1_k127_2049377_2 Catalyzes the deamination of 5'-deoxyadenosine into 5'- deoxyinosine. May be involved in the recycling of 5'- deoxyadenosine, whereupon the 5'-deoxyribose moiety of 5'- deoxyinosine is further metabolized to deoxyhexoses used for the biosynthesis of aromatic amino acids in methanogens. Is also able to deaminate 5-methylthioadenosine, S-adenosyl-L-homocysteine and adenosine to a small extent K12960 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000001507 228.0
BYD1_k127_2057896_0 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 309.0
BYD1_k127_2057896_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002362 256.0
BYD1_k127_2060658_0 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 487.0
BYD1_k127_2060658_1 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000001024 238.0
BYD1_k127_2067455_0 PKD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 305.0
BYD1_k127_2067455_1 Predicted membrane protein (DUF2079) - - - 0.00000000000000000000001121 111.0
BYD1_k127_2069555_0 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 345.0
BYD1_k127_2069555_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit K02118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002699 265.0
BYD1_k127_2070005_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 502.0
BYD1_k127_2070005_1 PFAM PKD domain containing protein - - - 0.000000000001239 81.0
BYD1_k127_2077663_0 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000005234 159.0
BYD1_k127_2088714_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 411.0
BYD1_k127_2088714_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03042 - 2.7.7.6 0.000000000000000000000000000000000000000000001594 170.0
BYD1_k127_2089926_0 PFAM NADH dehydrogenase (ubiquinone), 30 kDa subunit K18017 - 1.12.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005058 284.0
BYD1_k127_2089926_1 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K18023 - 1.12.7.2 0.0000000000000000000000000000000000000000001906 159.0
BYD1_k127_2089926_2 Membrane bound hydrogenase subunit K18016 - 1.12.7.2 0.000000000000000000000000000000001895 129.0
BYD1_k127_2097630_0 PFAM Acetoacetate decarboxylase (ADC) - - - 0.0000000000000000000000000000000000000000000000000000000000000002041 231.0
BYD1_k127_2097630_1 Multi-sensor signal transduction histidine kinase - - - 0.0000000006353 68.0
BYD1_k127_2097630_2 YHYH protein - - - 0.00003191 53.0
BYD1_k127_2100496_0 phosphoglycerate mutase K15635 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007692 524.0
BYD1_k127_2100496_1 Involved in regulation of DNA replication K10725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006089 427.0
BYD1_k127_2100496_2 PFAM NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000001152 176.0
BYD1_k127_211677_0 oligoendopeptidase F - - - 0.00000000000000000000000000000144 126.0
BYD1_k127_211677_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000001072 77.0
BYD1_k127_2152340_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009133 457.0
BYD1_k127_2152340_1 Thioesterase superfamily K02614 - - 0.000000000000002388 77.0
BYD1_k127_2156157_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 2.964e-300 925.0
BYD1_k127_2156157_1 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008792 321.0
BYD1_k127_2166017_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000001559 218.0
BYD1_k127_2166017_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000006082 149.0
BYD1_k127_2166017_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000382 52.0
BYD1_k127_2184259_0 PFAM extracellular solute-binding protein family 3 K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008009 376.0
BYD1_k127_2193630_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 449.0
BYD1_k127_2193630_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000664 86.0
BYD1_k127_2193630_2 PhoD-like phosphatase K01113 - 3.1.3.1 0.00005036 45.0
BYD1_k127_2198208_0 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 434.0
BYD1_k127_2209320_0 PFAM Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000942 222.0
BYD1_k127_2209320_1 - - - - 0.0000000000000000000000000000000000000006341 152.0
BYD1_k127_2209320_2 Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule - - - 0.00000000000000000000000001271 108.0
BYD1_k127_2209320_3 HD domain - - - 0.0000001901 54.0
BYD1_k127_2209409_0 PFAM PKD domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 570.0
BYD1_k127_2212986_0 PFAM sugar isomerase (SIS) K08094 - 5.3.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001383 299.0
BYD1_k127_2212986_1 PFAM methyltransferase small K02493 - 2.1.1.297 0.000000000000000000000000000000000000000000000000000001611 198.0
BYD1_k127_2212986_2 Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.000000000000000000000000000000000000000000000000000006562 192.0
BYD1_k127_2212986_3 - - - - 0.0000000000000000000000000000002232 128.0
BYD1_k127_222316_0 Peptidase family C69 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 504.0
BYD1_k127_222316_1 Predicted metal-binding protein (DUF2284) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002557 261.0
BYD1_k127_222316_2 PFAM regulatory protein TetR K03577,K18939 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006399 257.0
BYD1_k127_222316_3 redox protein regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000007295 124.0
BYD1_k127_2238797_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1107.0
BYD1_k127_2238797_1 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17104 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 2.5.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 383.0
BYD1_k127_2244069_0 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003021 222.0
BYD1_k127_2244069_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000009513 231.0
BYD1_k127_2244069_2 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 0.0000000000000000000000000000000000000000000000000000000246 204.0
BYD1_k127_2244069_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000002604 198.0
BYD1_k127_2244069_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.000000000000000000000000000000000000000000000002515 181.0
BYD1_k127_2264827_0 Domain of unknown function (DUF4445) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009389 610.0
BYD1_k127_2264827_1 HEPN domain - - - 0.000000000000000009585 88.0
BYD1_k127_2264827_2 META domain - - - 0.00000001102 62.0
BYD1_k127_2287757_0 Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00441 - 1.12.98.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008388 276.0
BYD1_k127_2287757_1 PFAM glutamate synthase alpha subunit domain protein - - - 0.00000000000000000000000000000000000000000000000005371 180.0
BYD1_k127_2287757_2 Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00441 - 1.12.98.1 0.000000000000000000000000000000000000001232 149.0
BYD1_k127_2292288_0 PFAM beta-lactamase domain protein K06897 - 2.5.1.105 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005105 411.0
BYD1_k127_2292288_1 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000000001808 94.0
BYD1_k127_2300155_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 482.0
BYD1_k127_2300155_1 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003073 313.0
BYD1_k127_2331125_0 archaeal Zn-finger protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000164 228.0
BYD1_k127_2331125_1 Domain of unknown function (DUF371) K09738 - - 0.000000000000000000000000000000000000002088 151.0
BYD1_k127_2331125_2 - - - - 0.00000000000000000000000000001643 120.0
BYD1_k127_2331125_3 - - - - 0.000000000005528 68.0
BYD1_k127_2334926_0 PAS domain - - - 0.0000000000000000000000000000000009934 131.0
BYD1_k127_2334926_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000004148 57.0
BYD1_k127_238833_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 369.0
BYD1_k127_2388646_0 Transcription elongation factor Spt5 K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009212 271.0
BYD1_k127_2388646_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000002803 140.0
BYD1_k127_2388646_2 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K07342 - - 0.0000000000000000000001606 97.0
BYD1_k127_2388646_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.000000007438 57.0
BYD1_k127_2395189_0 Protein of unknown function (DUF3467) - - - 0.0000000000000000000000000000000000000000000000009461 175.0
BYD1_k127_2395189_1 PFAM Stigma-specific protein, Stig1 - - - 0.00000000001059 70.0
BYD1_k127_2395189_2 Domain of unknown function DUF83 K07464 - 3.1.12.1 0.00001698 53.0
BYD1_k127_2411798_0 coenzyme F420 hydrogenase dehydrogenase beta subunit domain protein K00125 - 1.17.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006559 349.0
BYD1_k127_2411798_1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing K00123,K00367,K00372,K08356 - 1.17.1.9,1.20.2.1,1.20.9.1,1.7.7.2 0.00000000000000000000001375 101.0
BYD1_k127_2411798_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123,K05299 - 1.17.1.10,1.17.1.9 0.0002845 44.0
BYD1_k127_24138_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000005595 190.0
BYD1_k127_24138_1 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000000000000007551 160.0
BYD1_k127_24138_2 response regulator, receiver K07668,K07669 - - 0.000000000000000000000000000000000000002049 152.0
BYD1_k127_2441637_0 Helix-turn-helix diphteria tox regulatory element - - - 0.0000000000000000000000000000000000000000001934 160.0
BYD1_k127_2441637_1 Chemotaxis signal transduction protein K03408 - - 0.000000000000001163 77.0
BYD1_k127_2444040_0 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000009691 248.0
BYD1_k127_2444040_1 B12 binding domain K00548 - 2.1.1.13 0.00000000000000000000000000000000000000000000000000000000000000000007477 238.0
BYD1_k127_2444040_2 Protein of unknown function (DUF1638) - - - 0.0000000000000000000000000000000000000000000153 169.0
BYD1_k127_2444040_3 response regulator, receiver - - - 0.0000000000000003545 87.0
BYD1_k127_2457490_0 Integral membrane protein DUF92 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 381.0
BYD1_k127_2457490_1 Stage II sporulation protein M - - - 0.0000000000000000000000000000000000000000000000000000004542 202.0
BYD1_k127_2471004_0 PFAM extracellular solute-binding protein family 3 K02030 - - 0.000000000000000000000000000000000000000000004663 168.0
BYD1_k127_2471004_1 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000002403 75.0
BYD1_k127_2477666_0 Catalyzes the deamination of 5'-deoxyadenosine into 5'- deoxyinosine. May be involved in the recycling of 5'- deoxyadenosine, whereupon the 5'-deoxyribose moiety of 5'- deoxyinosine is further metabolized to deoxyhexoses used for the biosynthesis of aromatic amino acids in methanogens. Is also able to deaminate 5-methylthioadenosine, S-adenosyl-L-homocysteine and adenosine to a small extent K12960 GO:0003674,GO:0003824,GO:0016787,GO:0016810,GO:0016814,GO:0019239,GO:0050270 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 389.0
BYD1_k127_2481867_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.017e-227 708.0
BYD1_k127_2481867_1 PFAM isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 604.0
BYD1_k127_2481867_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.0000000000000000000000000000000000000000000000000000000000000001717 224.0
BYD1_k127_2481867_3 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 0.00000000000000000000000000000000000000002847 155.0
BYD1_k127_2491922_0 PFAM Stage II sporulation E family protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003588 454.0
BYD1_k127_2491922_1 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005893 353.0
BYD1_k127_2491922_2 methanogenesis marker protein 11 - - - 0.0000000000000000000000000000000000000000000000000000000009436 207.0
BYD1_k127_2491922_3 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000009324 124.0
BYD1_k127_2491926_0 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001903 402.0
BYD1_k127_2491926_1 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006462 296.0
BYD1_k127_2491926_2 PQQ enzyme repeat K05889,K12132 - 1.1.2.6,2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000002627 237.0
BYD1_k127_2491926_3 Copper binding proteins, plastocyanin/azurin family - - - 0.0000000000000000003141 91.0
BYD1_k127_2500449_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000353 616.0
BYD1_k127_2500449_1 - - - - 0.0000000000000000000000000000000000000000000000000000000001724 209.0
BYD1_k127_2500449_2 PFAM transferase hexapeptide repeat containing protein K04042 - 2.3.1.157,2.7.7.23 0.0000000000000000000000000000006979 124.0
BYD1_k127_2500449_3 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins - - - 0.00000111 51.0
BYD1_k127_2502476_0 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008473 265.0
BYD1_k127_2506847_0 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004206 589.0
BYD1_k127_2506847_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 480.0
BYD1_k127_2506847_10 - - - - 0.00000000000000000000000000000000000000000000000864 183.0
BYD1_k127_2506847_11 chorismate mutase K03785,K04093,K14187 GO:0003674,GO:0003824,GO:0004664,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006558,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009094,GO:0009095,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0019438,GO:0019752,GO:0042802,GO:0042803,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046983,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902221,GO:1902223 1.3.1.12,4.2.1.10,5.4.99.5 0.00000000000007142 76.0
BYD1_k127_2506847_2 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 327.0
BYD1_k127_2506847_3 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 312.0
BYD1_k127_2506847_4 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 284.0
BYD1_k127_2506847_5 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001098 275.0
BYD1_k127_2506847_6 Chemotaxis signal transduction protein K03408,K03410 - - 0.000000000000000000000000000000000000000000000000000000000000000000006175 239.0
BYD1_k127_2506847_7 Chemotaxis signal transduction protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000001595 233.0
BYD1_k127_2506847_8 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000001125 223.0
BYD1_k127_2506847_9 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 0.000000000000000000000000000000000000000000000000000000000000001352 223.0
BYD1_k127_2512197_0 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00150 - 1.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 589.0
BYD1_k127_2512197_1 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 584.0
BYD1_k127_2512197_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007186 536.0
BYD1_k127_2512197_3 serine threonine protein kinase K07178 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 345.0
BYD1_k127_2512197_4 beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001264 319.0
BYD1_k127_2512197_5 Thiamine biosynthesis protein ThiC K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007447 305.0
BYD1_k127_2512197_6 KH domain protein K06961 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002816 276.0
BYD1_k127_2512197_7 SMART Excinuclease ABC, C subunit - - - 0.0000000000000000000000000000000000002013 147.0
BYD1_k127_2531011_0 PFAM NAD(P)H dehydrogenase (quinone) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 366.0
BYD1_k127_2531011_1 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000005463 229.0
BYD1_k127_2531011_2 chemotaxis K03406 - - 0.000000000000000000000000000000000001525 158.0
BYD1_k127_2531011_3 PFAM response regulator receiver - - - 0.000000000000000000000000008575 115.0
BYD1_k127_2539481_0 PFAM aminotransferase class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 483.0
BYD1_k127_2540310_0 Proton-conducting membrane transporter K05565,K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 321.0
BYD1_k127_2540310_1 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit K18023 - 1.12.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000006989 254.0
BYD1_k127_2540310_2 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) K00123,K00390,K00441,K03388,K14121,K22174 - 1.1.98.4,1.12.98.1,1.17.1.9,1.8.4.10,1.8.4.8,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000006567 113.0
BYD1_k127_2576260_0 - - - - 0.0000000000000000000000000000001483 132.0
BYD1_k127_2576260_1 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.00000000000000000001034 99.0
BYD1_k127_2576260_2 Permease family K06901 - - 0.0000000005694 61.0
BYD1_k127_2577928_0 DEAD DEAH box helicase domain protein K05592 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005211 431.0
BYD1_k127_2577928_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 424.0
BYD1_k127_2577971_0 PFAM ABC transporter K00400 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 433.0
BYD1_k127_2577971_1 E1-E2 ATPase K01534 - 3.6.3.3,3.6.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 356.0
BYD1_k127_2581690_0 Orotidine 5'-phosphate decarboxylase K13831 - 4.1.2.43,5.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 573.0
BYD1_k127_2581690_1 Subtilase family K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000006093 126.0
BYD1_k127_2593387_0 Single cache domain 3 K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 451.0
BYD1_k127_2594826_0 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 427.0
BYD1_k127_2594826_1 formylmethanofuran dehydrogenase, subunit E K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 298.0
BYD1_k127_2594826_2 PFAM transport system permease protein K02015 - - 0.000000000000000000000000000000000000000000000000000000000007877 207.0
BYD1_k127_2596871_0 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 365.0
BYD1_k127_2596871_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 338.0
BYD1_k127_2596871_2 Peptidyl-prolyl cis-trans K01802,K03768,K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000001649 211.0
BYD1_k127_2596871_3 PFAM ThiJ PfpI domain protein - - - 0.000000000000000000000000000000000000000008002 156.0
BYD1_k127_2596871_4 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000001831 83.0
BYD1_k127_2596871_5 TPR repeat - - - 0.000003636 59.0
BYD1_k127_2598008_0 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 301.0
BYD1_k127_2598008_1 PFAM ThiJ PfpI domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007767 272.0
BYD1_k127_2598008_2 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000003264 190.0
BYD1_k127_2598008_3 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.000000000000000000000000000000000000000001461 161.0
BYD1_k127_2598008_4 - - - - 0.000000000000000000000000000000000000003891 169.0
BYD1_k127_2598008_5 Periplasmic copper-binding protein (NosD) - - - 0.0000000000000000000000000000002025 144.0
BYD1_k127_2646077_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K03330 - 6.3.5.7 1.031e-284 888.0
BYD1_k127_2646077_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate K09482 - 6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 584.0
BYD1_k127_2646077_2 Belongs to the carbohydrate kinase PfkB family K00852,K22026 - 2.7.1.15,2.7.1.213,2.7.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003623 404.0
BYD1_k127_2646077_3 TIGRFAM argininosuccinate lyase K01755 - 4.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008359 340.0
BYD1_k127_2646077_4 PFAM Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000256 225.0
BYD1_k127_2646077_5 Belongs to the UPF0212 family K09731 - - 0.000000000000000000000000000000000000000000000000004092 183.0
BYD1_k127_2646077_6 Family of unknown function (DUF5350) - - - 0.000000000000000000000000000000001195 132.0
BYD1_k127_2646082_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 569.0
BYD1_k127_2646082_1 SMART Elongator protein 3 MiaB NifB K15865 - 2.8.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000445 396.0
BYD1_k127_2646082_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001265 231.0
BYD1_k127_2646082_3 - - - - 0.00000000000000002977 87.0
BYD1_k127_2646082_4 Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate K01823,K06989 - 1.4.1.21,5.3.3.2 0.0000000000002777 70.0
BYD1_k127_2652952_0 inorganic K15986 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 3.6.1.1 3.834e-223 703.0
BYD1_k127_2661103_0 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor domain K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 333.0
BYD1_k127_2661103_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000005779 232.0
BYD1_k127_2661103_2 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor - - - 0.00000000000000000000000000000000000000003808 175.0
BYD1_k127_2668428_0 PFAM 4Fe-4S - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005183 342.0
BYD1_k127_2668428_1 PFAM TM2 domain containing protein K03686 - - 0.000000000000000008443 84.0
BYD1_k127_2683738_0 PFAM response regulator receiver - - - 6.403e-194 619.0
BYD1_k127_2683738_1 PFAM chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 587.0
BYD1_k127_2683738_2 - - - - 0.000000008684 56.0
BYD1_k127_2683779_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002679 518.0
BYD1_k127_270885_0 Pas domain - - - 0.0000000000000000000000000000000000000000000001109 173.0
BYD1_k127_270885_1 TPR repeat-containing protein - - - 0.00000000000000000000844 98.0
BYD1_k127_2712205_0 COG0433 Predicted ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005864 300.0
BYD1_k127_2712205_1 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000005198 264.0
BYD1_k127_2718078_0 LOR SDH bifunctional enzyme conserved - - - 6.265e-203 638.0
BYD1_k127_2718078_1 MobA-like NTP transferase domain K19712 - 2.7.7.62 0.000000000000000000000000000000000007546 141.0
BYD1_k127_2718078_2 SMART Elongator protein 3 MiaB NifB K06936 - - 0.0000000000000000003356 87.0
BYD1_k127_2719287_0 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000007002 245.0
BYD1_k127_2719287_1 PFAM CheW domain protein K03408 - - 0.000000000000000000000005183 108.0
BYD1_k127_2724935_0 Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate K15527 - 2.5.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 567.0
BYD1_k127_2724935_1 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 538.0
BYD1_k127_2724935_2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K13039 - 4.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 512.0
BYD1_k127_2724935_3 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000149 282.0
BYD1_k127_2724935_4 PFAM Fe-S cluster domain protein K06939 - - 0.000000000000000000000000000000000000000000000000000000000000000007938 227.0
BYD1_k127_2724935_5 cell adhesion involved in biofilm formation - - - 0.0000000000000000002402 98.0
BYD1_k127_2731261_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000002629 60.0
BYD1_k127_2741354_0 PAS domain - - - 0.000000000000000000000000000000000000000000001503 177.0
BYD1_k127_2742216_0 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001167 263.0
BYD1_k127_2742216_1 ATPases associated with a variety of cellular activities K02017 - 3.6.3.29 0.000000000000000000000000000000000000000000000000000000000000006456 225.0
BYD1_k127_2745618_0 PFAM glutamate synthase alpha subunit domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 389.0
BYD1_k127_2745618_1 Belongs to the glutamate synthase family - - - 0.000000000000000000000000000000000000000000000000000000006472 199.0
BYD1_k127_2745618_2 Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00441 - 1.12.98.1 0.000000000000000000000000001494 112.0
BYD1_k127_274874_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009482 422.0
BYD1_k127_277556_0 Protein of unknown function (DUF1722) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000484 257.0
BYD1_k127_277556_1 Chagasin family peptidase inhibitor I42 K14475 - - 0.000008244 55.0
BYD1_k127_2794227_0 Uncharacterized protein conserved in archaea (DUF2114) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002659 487.0
BYD1_k127_2794227_1 - - - - 0.0000000000000000000000173 102.0
BYD1_k127_2794593_0 DeoC/LacD family aldolase K11645,K16305 - 2.2.1.11,4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008488 515.0
BYD1_k127_2794593_1 permease K03299 - - 0.00000000000000000000000000000000007201 135.0
BYD1_k127_2794593_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 0.00000000000000000000000035 105.0
BYD1_k127_2794593_4 - - - - 0.000000000001874 71.0
BYD1_k127_2824255_0 DEAD DEAH box helicase domain protein K10896 - - 1.555e-265 828.0
BYD1_k127_2824255_1 PFAM tRNA synthetase, class II (G, H, P and S) K01880 - 6.1.1.14 7.633e-235 730.0
BYD1_k127_2851892_0 protein conserved in archaea - - - 0.000000000000000000000000000000000000000000000000001358 191.0
BYD1_k127_2851892_1 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000001925 91.0
BYD1_k127_2851892_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.0001846 44.0
BYD1_k127_2895808_0 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 510.0
BYD1_k127_2904884_0 L-lactate permease K03303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 571.0
BYD1_k127_2904884_1 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005886,GO:0015935,GO:0016020,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071944,GO:1990904 - 0.000000000009711 65.0
BYD1_k127_2904884_2 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.00001207 49.0
BYD1_k127_2925211_0 Amino acid ABC transporter substrate-binding protein, PAAT family K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005146 415.0
BYD1_k127_2925211_1 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 371.0
BYD1_k127_2925211_2 PFAM ABC transporter related K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000005761 176.0
BYD1_k127_2939802_0 Tetratricopeptide repeat - - - 0.0000000000000000000000000000002402 136.0
BYD1_k127_2954666_0 Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys) K07587 - 6.1.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 599.0
BYD1_k127_2954666_1 Component of the wyosine derivatives biosynthesis pathway that catalyzes the condensation of N-methylguanine with 2 carbon atoms from pyruvate to form the tricyclic 4-demethylwyosine (imG-14) on guanosine-37 of tRNA(Phe) K15449 - 4.1.3.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 481.0
BYD1_k127_2954666_2 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 0.0000000000000000000000000000000000000000000000000000001779 202.0
BYD1_k127_2964191_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1299.0
BYD1_k127_2964191_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 492.0
BYD1_k127_2964191_2 - - - - 0.00000000000000000000000000000000000001858 149.0
BYD1_k127_2964191_3 chromosome segregation and condensation protein ScpA K05896 - - 0.000000000000000000000000000001188 126.0
BYD1_k127_2969100_0 TIGRFAM molybdenum cofactor synthesis domain K03638 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000004272 203.0
BYD1_k127_2969100_1 KEOPS complex Cgi121-like subunit K09119 - - 0.000000000000000000000000000000002149 135.0
BYD1_k127_2969100_2 Involved in regulation of DNA replication K10725 - - 0.000005492 49.0
BYD1_k127_2987254_0 Involved in regulation of DNA replication K10725 - - 2.941e-244 758.0
BYD1_k127_2987254_1 PFAM Aminotransferase class I and II K10907 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001193 288.0
BYD1_k127_2987254_2 PFAM regulatory protein AsnC Lrp family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003541 274.0
BYD1_k127_2994555_0 Catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form coenzyme F420-0-glutamyl-glutamate (F420-2) or polyglutamated F420 derivatives K12234 - 6.3.2.31,6.3.2.34 0.00000000000000000000000000007566 117.0
BYD1_k127_2994555_1 COG0433 Predicted ATPase - - - 0.000000000000000001161 94.0
BYD1_k127_2994555_2 - - - - 0.00000000004981 67.0
BYD1_k127_3001351_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000343 260.0
BYD1_k127_3001351_1 PFAM peptidase M50 - - - 0.00000000000000000000000000000000000000003343 157.0
BYD1_k127_3003461_0 - - - - 0.000000000000000000000000000000000001571 149.0
BYD1_k127_3003461_1 Tetratricopeptide repeat - - - 0.00000000000004255 78.0
BYD1_k127_302148_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 1.016e-282 874.0
BYD1_k127_302148_1 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 318.0
BYD1_k127_3028477_0 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03432 GO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005839,GO:0019773,GO:0032991,GO:0044424,GO:0044464,GO:1902494,GO:1905368,GO:1905369 3.4.25.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 446.0
BYD1_k127_3028477_1 PFAM Shwachman-Bodian-Diamond syndrome K14574 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 375.0
BYD1_k127_3028477_2 Belongs to the eukaryotic ribosomal protein eL15 family K02877 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 339.0
BYD1_k127_3028477_3 binds to the 23S rRNA K02921 - - 0.00000000000000000000000000000000000000000000000427 173.0
BYD1_k127_3028477_4 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000007693 171.0
BYD1_k127_3028477_5 Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends K03539 - 3.1.26.5 0.00000000000000000000000000000000000000001297 161.0
BYD1_k127_3028477_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03059 - 2.7.7.6 0.0000000000000000000002238 96.0
BYD1_k127_303558_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002782 331.0
BYD1_k127_3057486_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K02574 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002038 257.0
BYD1_k127_3057486_1 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000002962 229.0
BYD1_k127_3057486_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000004634 136.0
BYD1_k127_3057486_3 - - - - 0.000000003942 66.0
BYD1_k127_3057486_4 Trypsin-like peptidase domain - - - 0.0000001687 59.0
BYD1_k127_3057486_5 Major facilitator superfamily - - - 0.000006772 52.0
BYD1_k127_3057486_6 PFAM major facilitator superfamily MFS_1 - - - 0.00001094 48.0
BYD1_k127_307035_0 PFAM Radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002819 228.0
BYD1_k127_307035_1 PFAM response regulator receiver - - - 0.000000000000000000000000000000000007988 139.0
BYD1_k127_3076095_0 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 397.0
BYD1_k127_3076095_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000001741 209.0
BYD1_k127_3079400_0 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000000000000000002288 164.0
BYD1_k127_3079400_1 Response regulator, receiver - - - 0.0000000000000000000000000000000001343 151.0
BYD1_k127_3079400_2 phosphorelay signal transduction system K02481 - - 0.00000000001128 78.0
BYD1_k127_3084375_0 Carbamoyl-phosphate synthetase large chain, oligomerisation K01955 - 6.3.5.5 4.901e-282 872.0
BYD1_k127_3084375_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 8.122e-227 707.0
BYD1_k127_3084375_2 Transcriptional regulator, TrmB - - - 0.0000000000000000000000000212 113.0
BYD1_k127_3104687_0 Translation initiation factor 2 alpha subunit K03237 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007269 424.0
BYD1_k127_3104687_1 protein conserved in archaea K09723 - - 0.0000000000000000000000000000000000000000000000000000000000008235 218.0
BYD1_k127_3104687_2 binds to the 23S rRNA K02929 - - 0.000000000000000000000000000000000000000000000000002162 183.0
BYD1_k127_3104687_3 PFAM Ribosomal protein S27E K02978 - - 0.0000000000000000000006752 95.0
BYD1_k127_3104687_4 more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA K11130 - - 0.000000000000000004197 86.0
BYD1_k127_3110485_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000488 392.0
BYD1_k127_3110485_1 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000003289 238.0
BYD1_k127_3110485_2 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000003088 171.0
BYD1_k127_3110984_0 Archaeal Nre, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 447.0
BYD1_k127_3110984_1 PFAM TPR repeat-containing protein K03410 - - 0.0000000000000000000000000000001463 128.0
BYD1_k127_3114151_0 Pas domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 336.0
BYD1_k127_3114151_1 Histidine kinase-like ATPases K20971,K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000006522 231.0
BYD1_k127_3114151_2 Histidine kinase - - - 0.0000000000000000000000000000003972 140.0
BYD1_k127_3114151_3 L-carnitine dehydratase bile acid-inducible protein F - - - 0.0000000000000000000000173 102.0
BYD1_k127_3134931_0 beta-lactamase domain protein - - - 5.32e-216 681.0
BYD1_k127_3134931_1 aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001891 571.0
BYD1_k127_3134931_2 peptidase M42 family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002146 341.0
BYD1_k127_3134931_3 PFAM sugar isomerase (SIS) K08094 - 5.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000247 321.0
BYD1_k127_3165515_0 Molecular chaperone capable of stabilizing a range of proteins. Seems to fulfill an ATP-independent, HSP70-like function in archaeal de novo protein folding K04797 - - 0.000000000000000000000000000000000000000000000000000000000000001478 220.0
BYD1_k127_3165515_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) K03110 - - 0.0000000000000000000000000000000000000000000000000000008614 198.0
BYD1_k127_3165515_2 Binds to the 50S ribosomal subunit and prevents its association with the 30S ribosomal subunit to form the 70S initiation complex K03264 - - 0.0000000000000000000000000000000000000001263 151.0
BYD1_k127_3165515_3 PFAM Ribosomal LX protein K02944 - - 0.0000000000004266 70.0
BYD1_k127_3171304_0 TIGRFAM phosphoribosylaminoimidazolecarboxamide formyltransferase IMP cyclohydrolase K00602 - 2.1.2.3,3.5.4.10 7.943e-235 735.0
BYD1_k127_3171304_1 Citrate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001834 373.0
BYD1_k127_3171304_2 Domain of unknown function (DUF3821) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005024 265.0
BYD1_k127_3171304_3 PFAM sugar isomerase (SIS) K08094 - 5.3.1.27 0.000000000000000000000000000000000000000001518 159.0
BYD1_k127_3171304_4 response regulator, receiver K03413 - - 0.000000000000000000000000000000008341 130.0
BYD1_k127_3178383_0 PFAM AMMECR1 domain protein K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002135 252.0
BYD1_k127_3178383_1 - - - - 0.00000000000000000000000000000000000000000000001527 179.0
BYD1_k127_3183501_0 PFAM B3 4 domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 323.0
BYD1_k127_3183501_1 PFAM Cache, type 2 domain protein K02030 - - 0.0000000000000000000000000000000000000001951 159.0
BYD1_k127_3226249_0 Uncharacterised conserved protein (DUF2156) K01163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000419 439.0
BYD1_k127_3226249_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000002954 82.0
BYD1_k127_3226249_2 FR47-like protein - - - 0.00000007043 56.0
BYD1_k127_324654_0 PFAM ABC transporter K00400 - - 8.436e-282 873.0
BYD1_k127_324654_1 Belongs to the UPF0288 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 563.0
BYD1_k127_324654_2 PFAM Haloacid dehalogenase domain protein hydrolase K17686 - 3.6.3.54 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 371.0
BYD1_k127_324654_3 Belongs to the eIF-2B alpha beta delta subunits family K18237 - 5.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 364.0
BYD1_k127_324654_4 Uncharacterized protein conserved in archaea (DUF2112) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002765 254.0
BYD1_k127_324654_5 PFAM ATPase, BadF BadG BcrA BcrD type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004515 254.0
BYD1_k127_324654_6 Uncharacterized protein conserved in archaea (DUF2102) - - - 0.000000000000000000000000000000000000000000000000000000000000008624 220.0
BYD1_k127_3255515_0 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005726 578.0
BYD1_k127_3255515_1 Mitochondrial biogenesis AIM24 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004016 254.0
BYD1_k127_3273459_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000004141 128.0
BYD1_k127_3310811_0 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006219 370.0
BYD1_k127_3310811_1 hydrophobe amphiphile efflux-3 (HAE3) family K07003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005451 341.0
BYD1_k127_3314210_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005336 447.0
BYD1_k127_3330039_0 cation diffusion facilitator family transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006456 363.0
BYD1_k127_3330039_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000001769 190.0
BYD1_k127_3330039_3 Transcription factor zinc-finger K09981 - - 0.000000000000002719 80.0
BYD1_k127_3353560_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 599.0
BYD1_k127_3359430_0 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 287.0
BYD1_k127_3359430_1 isoprenylcysteine carboxyl methyltransferase - - - 0.00000000000000000001979 96.0
BYD1_k127_3359430_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000008323 63.0
BYD1_k127_3369872_0 PFAM PUA domain containing protein K07557 - 2.6.1.97 2.996e-245 768.0
BYD1_k127_3369872_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 1.152e-234 731.0
BYD1_k127_3369872_2 Sulfide dehydrogenase (Flavoprotein) subunit SudB K00528,K02823 - 1.18.1.2,1.19.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 452.0
BYD1_k127_3369872_3 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 0.000000000000000000000000000000000000000000000000000000000000000000002762 238.0
BYD1_k127_3377926_0 Integral membrane protein DUF92 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 372.0
BYD1_k127_3377926_1 PFAM TPR repeat-containing protein - - - 0.000000000000000004497 89.0
BYD1_k127_3379024_0 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 412.0
BYD1_k127_3379024_1 APHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 291.0
BYD1_k127_3379024_2 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.0000000000000000000000000001719 115.0
BYD1_k127_3390102_0 PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K03394 - 2.1.1.130,2.1.1.151 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005262 271.0
BYD1_k127_3390102_1 Catalyzes the methylation of C-15 in cobalt-precorrin-6B followed by the decarboxylation of C-12 to form cobalt-precorrin- 7 K02191 - 2.1.1.196 0.00000000000000000000000000000000000000000000000000004737 193.0
BYD1_k127_3390102_2 part of an ABC transporter complex. Responsible for energy coupling to the transport system K02006 - - 0.000000000000000000000000000000006512 132.0
BYD1_k127_3390102_3 Belongs to the precorrin methyltransferase family K05936 - 2.1.1.133,2.1.1.271 0.000001872 49.0
BYD1_k127_3394346_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003876 477.0
BYD1_k127_3394346_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000088 220.0
BYD1_k127_3394346_2 FIST C domain - - - 0.0000000000000000000000000002686 117.0
BYD1_k127_3413570_0 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.0000000000000000000000000000000000000000000000001618 180.0
BYD1_k127_3413570_1 OST-HTH/LOTUS domain - - - 0.000000000000000000000000004083 124.0
BYD1_k127_3415071_0 PFAM peptidase U32 K08303 - - 0.000000000000000000000000000000000000000000000000133 194.0
BYD1_k127_3415071_1 8-oxoguanine DNA glycosylase domain protein K03660 - 4.2.99.18 0.000006057 49.0
BYD1_k127_3415263_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 333.0
BYD1_k127_3415263_1 Flavodoxin - GO:0000166,GO:0003674,GO:0003824,GO:0004729,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0010181,GO:0016491,GO:0016627,GO:0016634,GO:0016635,GO:0018130,GO:0019438,GO:0032553,GO:0033013,GO:0033014,GO:0034641,GO:0036094,GO:0042168,GO:0042440,GO:0043167,GO:0043168,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0055114,GO:0070818,GO:0070819,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000048 217.0
BYD1_k127_3415980_0 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain - - - 0.00000000000000000000000000000000000000000000000002028 190.0
BYD1_k127_3415980_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000133 154.0
BYD1_k127_3415980_2 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 0.0003834 46.0
BYD1_k127_3425308_0 SMART PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000252 467.0
BYD1_k127_3425308_1 serine-type endopeptidase activity - - - 0.000000000000000000705 95.0
BYD1_k127_3439494_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 6.447e-251 783.0
BYD1_k127_3454883_0 PFAM aminotransferase, class I - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003023 391.0
BYD1_k127_3454883_1 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002894 246.0
BYD1_k127_3454883_2 Ferric reductase like transmembrane component - - - 0.00000000000000000000000000002413 124.0
BYD1_k127_3454883_3 - - - - 0.0000000000000000000000001071 114.0
BYD1_k127_3454883_4 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.00000000000000001301 82.0
BYD1_k127_346333_0 Pas domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006042 536.0
BYD1_k127_3468603_0 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step K00581 - 2.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000324 568.0
BYD1_k127_3468603_1 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step K00580 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004415 457.0
BYD1_k127_3468603_2 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step K00579 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002647 450.0
BYD1_k127_3468603_3 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step K00577 - 2.1.1.86 0.0000000000000000000000000000000000000000000000000000000000002211 212.0
BYD1_k127_3468603_4 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step K00578 - 2.1.1.86 0.000000000000000000000000000000000000000000003199 164.0
BYD1_k127_3468713_0 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001153 251.0
BYD1_k127_3468713_1 PAS domain - - - 0.0000000000000000000000000000000000000000000002045 175.0
BYD1_k127_3476783_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00440 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 1.12.98.1 2.225e-281 868.0
BYD1_k127_3476783_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002501 398.0
BYD1_k127_3476783_2 coenzyme F420-reducing hydrogenase, delta subunit K00442 - - 0.000000000000000000000000000001802 121.0
BYD1_k127_3479666_0 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 442.0
BYD1_k127_3479666_1 Involved in allosteric regulation of aspartate carbamoyltransferase K00610 - - 0.0000000000000000000000000000000000000000000000000000000000000001087 224.0
BYD1_k127_3479666_2 TIGRFAM cytidyltransferase-related domain K02201 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000003574 210.0
BYD1_k127_3486223_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000003376 145.0
BYD1_k127_3486223_1 Histidine kinase - - - 0.000000000000000004894 99.0
BYD1_k127_3486223_2 - - - - 0.000000000003665 76.0
BYD1_k127_3487648_0 PAS domain - - - 0.00000000000000000000000000000000000000000000000000006965 198.0
BYD1_k127_3522303_1 PFAM Exonuclease VII small subunit K03602 - 3.1.11.6 0.00000000000000002285 82.0
BYD1_k127_3522303_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000004529 52.0
BYD1_k127_3522303_3 response regulator, receiver K07669 - - 0.0000114 47.0
BYD1_k127_3529723_0 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002441 244.0
BYD1_k127_3529723_1 PFAM Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000003385 219.0
BYD1_k127_3529723_2 P-loop Domain of unknown function (DUF2791) K01251 - 3.3.1.1 0.0000000000000000000000000000000000000000000003212 171.0
BYD1_k127_3533233_0 ATP-grasp domain K06913 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005225 285.0
BYD1_k127_3533233_1 Transcription factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Facilitates transcription initiation by enhancing TATA-box recognition by TATA-box-binding protein (Tbp), and transcription factor B (Tfb) and RNA polymerase recruitment. Not absolutely required for transcription in vitro, but particularly important in cases where Tbp or Tfb function is not optimal. It dynamically alters the nucleic acid-binding properties of RNA polymerases by stabilizing the initiation complex and destabilizing elongation complexes. Seems to translocate with the RNA polymerase following initiation and acts by binding to the non template strand of the transcription bubble in elongation complexes K03136 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001181 269.0
BYD1_k127_3533233_2 regulator of amino acid metabolism, contains ACT domain K07103 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001863 245.0
BYD1_k127_3533233_3 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.000000000000000000000000000000000000003236 152.0
BYD1_k127_3536191_0 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000006061 194.0
BYD1_k127_3536191_1 regulatory protein, arsR K21903 - - 0.000000000000000003286 90.0
BYD1_k127_3536191_2 DGC domain - - - 0.0000000000004585 70.0
BYD1_k127_3548239_0 Creatinase/Prolidase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 369.0
BYD1_k127_3548239_1 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000008921 96.0
BYD1_k127_3562751_0 FHA domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 389.0
BYD1_k127_3566420_0 extracellular matrix structural constituent K01385 - 3.4.23.42 0.0 1585.0
BYD1_k127_358526_0 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004669 412.0
BYD1_k127_3585377_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008597 475.0
BYD1_k127_3585377_1 TIGRFAM geranylgeranyl reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 415.0
BYD1_k127_3585377_2 hydrolase K04794 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000004282 209.0
BYD1_k127_3585377_3 Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000001346 196.0
BYD1_k127_3585377_4 - - - - 0.0000000000000000000000000000000000000000000000797 170.0
BYD1_k127_3585377_5 Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs K06176 - 5.4.99.27 0.0001651 44.0
BYD1_k127_3586525_0 PAS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007384 343.0
BYD1_k127_3586525_1 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000002221 215.0
BYD1_k127_3586525_2 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000005538 147.0
BYD1_k127_3586525_3 - - - - 0.000000000000000000000000000000008896 128.0
BYD1_k127_3593577_0 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 581.0
BYD1_k127_3593577_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03047 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005396 414.0
BYD1_k127_3593577_2 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003618 275.0
BYD1_k127_3593577_3 Located on the platform of the 30S subunit K02948 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003072 242.0
BYD1_k127_3593577_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000000000004422 228.0
BYD1_k127_3593577_5 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000000007207 219.0
BYD1_k127_3593577_6 Belongs to the eukaryotic ribosomal protein eL18 family K02883 - - 0.000000000000000000000000000000000000000000000000003904 183.0
BYD1_k127_3593577_7 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03058 - 2.7.7.6 0.000000000000000000000000000000003395 128.0
BYD1_k127_3593577_8 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03055 - 2.7.7.6 0.000000000000000000007734 92.0
BYD1_k127_3593577_9 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.000000000001151 68.0
BYD1_k127_3611955_0 SMART Elongator protein 3 MiaB NifB - - - 8.48e-234 736.0
BYD1_k127_3611955_1 TIR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003081 250.0
BYD1_k127_3611955_2 TIGRFAM alkylhydroperoxidase like protein, AhpD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001398 239.0
BYD1_k127_3611955_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001527 246.0
BYD1_k127_3611955_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000006482 230.0
BYD1_k127_3614016_0 phosphohydrolase (DHH superfamily) K07097 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 546.0
BYD1_k127_3614016_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 378.0
BYD1_k127_3614016_2 PFAM thymidylate kinase K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000047 259.0
BYD1_k127_3614016_3 Belongs to the HisA HisF family K01814 - 5.3.1.16 0.000000000000000000000000000000001001 133.0
BYD1_k127_3614016_4 - - - - 0.000000000000000000000000000003726 129.0
BYD1_k127_3636489_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 4.855e-201 637.0
BYD1_k127_3650601_0 YoaP-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 377.0
BYD1_k127_3650601_1 Threonine/Serine exporter, ThrE - - - 0.0006139 49.0
BYD1_k127_3652290_0 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000001901 170.0
BYD1_k127_3652290_1 PAS fold - - - 0.0000000000000000000002579 111.0
BYD1_k127_3663298_0 PFAM chaperonin Cpn60 TCP-1 K22447 - - 3.248e-246 763.0
BYD1_k127_3663298_1 HTH-type transcriptional regulatory protein K07728 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 490.0
BYD1_k127_3663298_2 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 336.0
BYD1_k127_3701650_0 methyl-accepting chemotaxis protein K03406 - - 8.974e-250 789.0
BYD1_k127_3701650_1 Protein of unknown function (DUF3147) - - - 0.0001485 45.0
BYD1_k127_3701763_0 signal transduction protein with CBS domains K07744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005186 403.0
BYD1_k127_3701763_1 TIGRFAM small GTP-binding protein K06943 - - 0.0000000000000000000005645 97.0
BYD1_k127_370294_0 Specifically catalyzes the AdoMet-dependent 2'-O-ribose methylation of cytidine at position 56 in tRNAs K07254 - 2.1.1.206 0.00000000000000000000000000000000000000000000000000000000000000000000000000001835 262.0
BYD1_k127_370294_1 Protein of unknown function (DUF541) K09807 - - 0.0000000000000000000000000000000000000000000000000000000000000000001255 235.0
BYD1_k127_370294_2 ATP-grasp domain K06913 - - 0.0000000000000000000000000001798 117.0
BYD1_k127_370294_3 - - - - 0.0000000000001761 74.0
BYD1_k127_3703745_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000003982 164.0
BYD1_k127_3703745_1 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000009012 155.0
BYD1_k127_3703745_2 Bacterial regulatory protein, arsR family - - - 0.000000000000000000000000000000000000002824 149.0
BYD1_k127_3713409_0 aminoacyl-histidine dipeptidase K01270 - - 0.00000000000000000000000000000000000000000000006821 182.0
BYD1_k127_3719989_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 6.107e-199 622.0
BYD1_k127_3722417_0 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008125 280.0
BYD1_k127_3722417_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000001009 100.0
BYD1_k127_3739151_0 COG0438 Glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 508.0
BYD1_k127_3739151_1 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002121 339.0
BYD1_k127_373936_0 PFAM aminotransferase class V - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 434.0
BYD1_k127_373936_1 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000001587 244.0
BYD1_k127_373936_2 Belongs to the UPF0305 family - - - 0.000000000000000000000000000000000000000000000000000000000669 206.0
BYD1_k127_373936_3 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000467 164.0
BYD1_k127_373936_4 PFAM molybdopterin biosynthesis MoaE K03635,K21142 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0019538,GO:0019637,GO:0019693,GO:0030366,GO:0032324,GO:0034641,GO:0042278,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657 2.8.1.12 0.00000000000000000000000000000000000000000166 159.0
BYD1_k127_376103_0 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000000000000000000000000007906 229.0
BYD1_k127_3761229_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 8.298e-194 616.0
BYD1_k127_3777168_0 Serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006 405.0
BYD1_k127_379587_0 Binds the lower part of the 30S subunit head K02982 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 321.0
BYD1_k127_379587_1 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001782 268.0
BYD1_k127_379587_2 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001165 250.0
BYD1_k127_379587_3 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000000000000000000000000000000001542 237.0
BYD1_k127_3797728_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003981 520.0
BYD1_k127_3797728_1 Belongs to the SUI1 family K03113 - - 0.0000000000000000000000000000000000000000000000000000000004567 202.0
BYD1_k127_3797728_2 Zn-ribbon containing protein K00937,K07163 - 2.7.4.1 0.0000000000000585 72.0
BYD1_k127_3806560_0 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000001002 226.0
BYD1_k127_3806560_1 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000001549 186.0
BYD1_k127_3814483_0 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 515.0
BYD1_k127_3814483_1 DGC domain - - - 0.0000000000000000000000000000000000000000000000000000001002 198.0
BYD1_k127_3814483_2 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000118 161.0
BYD1_k127_3814483_3 Does not function as a glutathione-disulfide oxidoreductase in the presence of glutathione and glutathione reductase. Has low thioredoxin activity in vitro - - - 0.0000000000000000000000000000000103 128.0
BYD1_k127_3814483_4 permease K03299 - - 0.00000000000000000000000000000001432 129.0
BYD1_k127_3814483_5 cytochrome c biogenesis protein, transmembrane region - - - 0.0000000000000000000000000000001328 130.0
BYD1_k127_3822877_0 PFAM Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001244 273.0
BYD1_k127_3826197_0 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001153 265.0
BYD1_k127_3826197_1 metallopeptidase activity - - - 0.00000000000002418 87.0
BYD1_k127_3826197_2 Protein of unknown function (DUF3344) - - - 0.00000001042 58.0
BYD1_k127_3834628_0 Catalyzes the condensation of pyruvate and acetyl- coenzyme A to form (R)-citramalate K09011 - 2.3.1.182 2.605e-250 776.0
BYD1_k127_3841097_0 TIGRFAM nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 1.993e-216 676.0
BYD1_k127_3841097_1 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009635 409.0
BYD1_k127_3841097_2 Belongs to the P(II) protein family K02590 - - 0.000000000000000000000000000000000000000000000000000000018 199.0
BYD1_k127_3841097_3 Belongs to the P(II) protein family K02589 - - 0.00000000000000000000000000000000000000000000003123 172.0
BYD1_k127_3841466_0 PFAM respiratory-chain NADH dehydrogenase, subunit 1 K14101 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 356.0
BYD1_k127_3841466_1 PFAM NiFe -hydrogenase-3-type complex Eha, membrane protein EhaH K14099 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005702 327.0
BYD1_k127_3841466_2 Predicted membrane protein (DUF2105) K14098 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001902 282.0
BYD1_k127_3841466_3 - K14093 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006628 254.0
BYD1_k127_3841466_4 PFAM NiFe -hydrogenase-3-type complex Eha, membrane protein EhaF K14097 - - 0.0000000000000000000000000000000000000000000000000000000000001178 215.0
BYD1_k127_3841466_5 Predicted membrane protein (DUF2109) K14094 - - 0.0000000000000000000000000003087 116.0
BYD1_k127_3841466_6 NiFe -hydrogenase-3-type complex Eha, membrane protein EhaE K14096 - - 0.0000000000000000000000004739 109.0
BYD1_k127_3841466_7 Predicted membrane protein (DUF2108) K14095 - - 0.000000000000000000000004433 103.0
BYD1_k127_3841466_8 - K14100 - - 0.0009642 46.0
BYD1_k127_3859617_0 Tex-like protein N-terminal domain K06959 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004157 468.0
BYD1_k127_3879809_0 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000009459 147.0
BYD1_k127_3879809_1 - - - - 0.0000000000000000000000000000000002158 135.0
BYD1_k127_3879809_2 COG0122 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.0000000000000000000000000000000013 132.0
BYD1_k127_3902089_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005328 468.0
BYD1_k127_3902519_0 PFAM transport system permease protein K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 423.0
BYD1_k127_3902519_1 PFAM ABC transporter K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 408.0
BYD1_k127_3902519_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008077 248.0
BYD1_k127_3902519_3 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000001504 68.0
BYD1_k127_3903248_0 membrane-associated protein domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009167 252.0
BYD1_k127_3903248_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000003709 111.0
BYD1_k127_3903248_3 PFAM Methionine synthase, vitamin-B12 independent K00549 - 2.1.1.14 0.00000000000001457 74.0
BYD1_k127_3906824_0 Catalyzes the transfer of diphosphate from ATP to 6- hydroxymethyl-7,8-dihydropterin (6-HMD), leading to 6- hydroxymethyl-7,8-dihydropterin diphosphate (6-HMDP) K07142 - 2.7.6.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 301.0
BYD1_k127_3906824_1 phosphoesterase RecJ domain protein - - - 0.0000000000000000000000000000000000000000000000002632 178.0
BYD1_k127_3906824_2 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000005114 124.0
BYD1_k127_3941289_0 thiamine pyrophosphate enzyme domain protein TPP-binding K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 431.0
BYD1_k127_3941289_1 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006884 280.0
BYD1_k127_3946626_0 - - - - 0.000000000000000521 88.0
BYD1_k127_3952254_0 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 315.0
BYD1_k127_3952254_1 COG1361 S-layer domain - - - 0.000000000000000000000000000000000000000000000003827 179.0
BYD1_k127_3952254_2 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000001151 177.0
BYD1_k127_3964818_0 peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 5.054e-208 672.0
BYD1_k127_3964818_1 PFAM AIR synthase related protein K07388 - - 1.395e-203 642.0
BYD1_k127_3964818_2 helicase activity K06915,K19172 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 573.0
BYD1_k127_3964818_3 Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella K07324,K07325 GO:0005575,GO:0005623,GO:0009288,GO:0042995,GO:0043226,GO:0043228,GO:0044464 - 0.000000000000002446 84.0
BYD1_k127_3975816_0 PFAM DEAD_2 domain protein K10844 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000005519 257.0
BYD1_k127_3975816_1 PFAM Hemerythrin HHE cation binding domain protein K07216 - - 0.0000000000000000000000000000000000000000000000000008245 187.0
BYD1_k127_3975816_2 COG2202 FOG PAS PAC domain - - - 0.000004836 58.0
BYD1_k127_3980916_0 PFAM DNA alkylation repair enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007413 282.0
BYD1_k127_3988499_0 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000327 232.0
BYD1_k127_3988499_1 rubredoxin - - - 0.00000000000000000000006714 99.0
BYD1_k127_3988499_2 response regulator, receiver - - - 0.00000000000000004017 85.0
BYD1_k127_399636_0 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000002314 212.0
BYD1_k127_399636_1 PFAM O-methyltransferase - - - 0.0000000000000000000000000000000000000000001076 172.0
BYD1_k127_4018771_0 - - - - 0.0000000000000000000008502 97.0
BYD1_k127_4018771_1 Cytotoxic translational repressor of toxin-antitoxin stability system K06218 - - 0.00009787 45.0
BYD1_k127_4028094_0 TIGRFAM 26S proteasome subunit P45 family K03420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006012 267.0
BYD1_k127_4028094_1 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000008409 256.0
BYD1_k127_4030140_0 pfam nmd3 K07562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 332.0
BYD1_k127_4030140_1 S-adenosyl-L-methionine-dependent transferase that acts as a component of the wyosine derivatives biosynthesis pathway. Catalyzes the transfer of the alpha-amino-alpha-carboxypropyl (acp) group from S-adenosyl-L-methionine to 4-demethylwyosine (imG-14), forming 7-aminocarboxypropyl-demethylwyosine (wybutosine-86) at position 37 of tRNA(Phe) K07055 - 2.5.1.114 0.0000000000000000000000000000000000000000000000000000000000000000001264 235.0
BYD1_k127_4031114_0 PFAM ABC transporter related - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 400.0
BYD1_k127_4031114_1 PFAM cobalamin synthesis protein P47K - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 366.0
BYD1_k127_4031114_2 transcriptional regulator, XRE family - - - 0.000000000000000000000000000000000000000004155 156.0
BYD1_k127_4031114_3 PFAM Fe-S cluster domain protein K06939 - - 0.00000000001655 67.0
BYD1_k127_4046794_0 4-alpha-glucanotransferase K00705 - 2.4.1.25 7.343e-201 636.0
BYD1_k127_4046794_1 PFAM phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000001462 207.0
BYD1_k127_4046794_2 Methyltransferase type 11 K00598 - 2.1.1.144 0.00000000002665 64.0
BYD1_k127_404920_0 Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.00000000000000000000000000000000000000000000000000000000000002092 220.0
BYD1_k127_404920_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02337,K02342,K03654 - 2.7.7.7,3.6.4.12 0.00000000000000000000000000000000000000007624 158.0
BYD1_k127_404920_2 - - - - 0.00000000000000000000000000000000000001051 147.0
BYD1_k127_404920_3 PFAM Glutaredoxin - - - 0.0000000000000000000000000000002377 127.0
BYD1_k127_4054945_0 PFAM type II secretion system protein E K07332 - - 7.782e-295 915.0
BYD1_k127_4054945_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 6.16e-212 678.0
BYD1_k127_4054945_2 Type II secretion system (T2SS), protein F K07333 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 451.0
BYD1_k127_4054945_3 Type II secretion system (T2SS), protein F K07333 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006675 450.0
BYD1_k127_4054945_4 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005717 241.0
BYD1_k127_4054945_5 COG0467 RecA-superfamily ATPases implicated in signal transduction - - - 0.000000004788 59.0
BYD1_k127_4058_0 Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively K06215 - 4.3.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 496.0
BYD1_k127_4058_1 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000002492 257.0
BYD1_k127_4058_2 Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS K08681 - 4.3.3.6 0.000000000000000000000000000000000001439 141.0
BYD1_k127_4061885_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009514 357.0
BYD1_k127_4061885_1 Uncharacterized protein conserved in archaea (DUF2240) - - - 0.0000000000000000000000000000000000000000000000000000000000008967 214.0
BYD1_k127_4061885_2 Belongs to the eukaryotic ribosomal protein eS6 family K02991 - - 0.00000000000000000000000000000000000000000000000000000000002268 208.0
BYD1_k127_4061898_0 TIGRFAM oxaloacetate decarboxylase alpha subunit K01960 - 6.4.1.1 1.305e-298 923.0
BYD1_k127_4061898_1 Carbamoyl-phosphate synthetase large chain domain protein K01959 - 6.4.1.1 2.136e-291 898.0
BYD1_k127_4061898_10 PFAM ABC transporter K16786 - - 0.00000000000000000000000000000000000000000000002647 178.0
BYD1_k127_4061898_11 PFAM Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000002207 159.0
BYD1_k127_4061898_12 Activates the tRNA-splicing ligase complex by facilitating the enzymatic turnover of catalytic subunit RtcB. Acts by promoting the guanylylation of RtcB, a key intermediate step in tRNA ligation. Can also alter the NTP specificity of RtcB such that ATP, dGTP or ITP is used efficiently - GO:0000394,GO:0003674,GO:0005488,GO:0005509,GO:0006139,GO:0006388,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0016070,GO:0034470,GO:0034641,GO:0034660,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000000000009195 154.0
BYD1_k127_4061898_13 - - - - 0.00000000000000000000000000000000000002868 145.0
BYD1_k127_4061898_14 Protein of unknown function (DUF2551) - - - 0.000000000000000000000000196 110.0
BYD1_k127_4061898_15 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.000000000008185 66.0
BYD1_k127_4061898_2 Belongs to the RtcB family K14415 - 6.5.1.3 9.919e-257 797.0
BYD1_k127_4061898_3 Protein-export membrane protein SecD K03072 - - 1.779e-228 715.0
BYD1_k127_4061898_4 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 535.0
BYD1_k127_4061898_5 Involved in protein export K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007855 420.0
BYD1_k127_4061898_6 PFAM ABC transporter K16787 - - 0.00000000000000000000000000000000000000000000000000000000000000009336 229.0
BYD1_k127_4061898_7 PFAM BioY protein K03523 - - 0.00000000000000000000000000000000000000000000000000000009924 201.0
BYD1_k127_4061898_8 Uncharacterized protein conserved in archaea (DUF2111) - - - 0.000000000000000000000000000000000000000000000000000003684 193.0
BYD1_k127_4061898_9 - - - - 0.000000000000000000000000000000000000000000000001318 180.0
BYD1_k127_4069601_0 Glycosyl hydrolase family 3 N terminal domain K01207 - 3.2.1.52 0.00000000001734 74.0
BYD1_k127_4070567_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002253 252.0
BYD1_k127_4098058_0 PFAM aldo keto reductase K07079 - - 4.279e-211 660.0
BYD1_k127_4098058_1 PFAM major facilitator superfamily MFS_1 K08223 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 457.0
BYD1_k127_4098058_2 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 374.0
BYD1_k127_4098058_3 PFAM helix-turn-helix HxlR type - - - 0.00000000000000000000000000000000000000000000000000000000002432 207.0
BYD1_k127_4098058_4 - - - - 0.00000000000000000000000000000000000000005519 151.0
BYD1_k127_4098058_5 Domain of unknown function (DUF4258) - - - 0.0000000000000000000575 90.0
BYD1_k127_4098058_6 Domain of unknown function (DUF4258) - - - 0.00000089 51.0
BYD1_k127_4101286_0 PFAM multi antimicrobial extrusion protein MatE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007176 427.0
BYD1_k127_4101286_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000004003 217.0
BYD1_k127_4109731_0 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 1.742e-207 657.0
BYD1_k127_4109731_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002962 380.0
BYD1_k127_4117273_0 Protein of unknown function (DUF655) K07572 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006277 314.0
BYD1_k127_4117273_1 Responsible for synthesis of pseudouridine from uracil- 54 and uracil-55 in the psi GC loop of transfer RNAs K07583 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000001078 221.0
BYD1_k127_4117273_2 PFAM RNA polymerase Rpb4 K03051 - 2.7.7.6 0.000000000000000000000000000000000000000000000000000843 185.0
BYD1_k127_4117273_3 Belongs to the eukaryotic ribosomal protein eL21 family K02889 - - 0.0000000000000000000000000000000000000000000000000113 180.0
BYD1_k127_4117273_4 Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000002118 73.0
BYD1_k127_4117558_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008181 453.0
BYD1_k127_4117558_1 Nitroreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001956 254.0
BYD1_k127_4117558_2 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000007954 179.0
BYD1_k127_4117558_3 TPR repeat-containing protein - - - 0.0000000000001988 78.0
BYD1_k127_4124729_0 - - - - 0.00000000000000000000000000000000000000000000000006677 183.0
BYD1_k127_4129081_0 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009109 295.0
BYD1_k127_4129081_1 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003074 238.0
BYD1_k127_4129081_2 Flavodoxin - - - 0.000000000000000000000000000000000000001559 152.0
BYD1_k127_4129081_3 Flavodoxin - - - 0.00000000000000000000000000000000000001133 149.0
BYD1_k127_4135195_0 PFAM chemotaxis sensory transducer K03406 - - 2.189e-293 933.0
BYD1_k127_4135195_1 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002187 265.0
BYD1_k127_4135195_2 Periplasmic copper-binding protein (NosD) - - - 0.00000002671 64.0
BYD1_k127_4135381_0 Iron only nitrogenase protein AnfO (AnfO_nitrog) - - - 0.00000000000000000000000000000000000000000000000000000000004414 211.0
BYD1_k127_4148165_0 COG3857 ATP-dependent nuclease, subunit B K16899 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 489.0
BYD1_k127_4148165_1 COG0210 Superfamily I DNA and RNA helicases K16898 - 3.6.4.12 0.00000000000000000000000000000000000000000000000002916 182.0
BYD1_k127_4150248_0 AAA ATPase domain - - - 2.156e-243 757.0
BYD1_k127_4150248_1 Radical SAM ThiC family K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 291.0
BYD1_k127_4151307_0 PFAM binding-protein-dependent transport systems inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003339 293.0
BYD1_k127_4151307_1 ATPases associated with a variety of cellular activities K02049 - - 0.000000000000000000000000000000000000000000000000000001899 198.0
BYD1_k127_4151307_2 NMT1-like family K02051 - - 0.00000008698 55.0
BYD1_k127_4153551_0 Aminotransferase class-III K01845,K07257,K21585 - 2.6.1.111,5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 378.0
BYD1_k127_4153551_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004848 253.0
BYD1_k127_4153932_0 ABC-2 family transporter protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 298.0
BYD1_k127_4153932_1 membrane protein domain - - - 0.000000000000000000000000000000000000000000001562 170.0
BYD1_k127_4156194_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 501.0
BYD1_k127_4166246_0 ATPases associated with a variety of cellular activities K05847 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004273 295.0
BYD1_k127_4166246_1 PFAM Stigma-specific protein, Stig1 - - - 0.0000000000000000000000000000000000000000000000000000000004187 209.0
BYD1_k127_4166246_2 COG1174 ABC-type proline glycine betaine transport systems, permease component K05846 - - 0.0000000000000000000000000000000000000000000000000000102 196.0
BYD1_k127_4166246_3 COG1732 Periplasmic glycine betaine choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) K05845,K05846 - - 0.0000000000000000000000000000000000000000000000002069 181.0
BYD1_k127_4166246_4 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999,K11954 - - 0.0000000000000000000000000000000000000000005774 163.0
BYD1_k127_4166246_5 Binding-protein-dependent transport system inner membrane component K05846 - - 0.000000000000000000000000000000000000000426 157.0
BYD1_k127_4181366_0 Domain of unknown function (DUF4956) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005377 276.0
BYD1_k127_4181366_1 VTC domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002984 232.0
BYD1_k127_4203239_0 cytidyltransferase-related domain K00952 - 2.7.7.1 0.000000000000000000000000000000000000000000000000000000000000000000001278 241.0
BYD1_k127_4203239_1 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000005243 172.0
BYD1_k127_4203239_2 AIR carboxylase K06898 - - 0.0000000000000000000000001495 106.0
BYD1_k127_4205761_0 PFAM PKD domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000646 454.0
BYD1_k127_4206945_0 Belongs to the eukaryotic ribosomal protein eS1 family K02984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 325.0
BYD1_k127_4206945_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005276 249.0
BYD1_k127_4206945_2 - - - - 0.0001499 45.0
BYD1_k127_4208825_0 TIGRFAM AAA family ATPase, CDC48 subfamily K13525 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 490.0
BYD1_k127_4216923_0 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 6.341e-243 757.0
BYD1_k127_4216923_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 1.041e-206 646.0
BYD1_k127_4216923_2 Produces ATP from ADP in the presence of a proton gradient across the membrane K02121 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001741 257.0
BYD1_k127_4216923_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit K02117 - 3.6.3.14,3.6.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000001934 248.0
BYD1_k127_4216923_4 PFAM H transporting two-sector ATPase C subunit K02124 - - 0.0000000000000000000000000000000002541 132.0
BYD1_k127_4216923_5 Produces ATP from ADP in the presence of a proton gradient across the membrane K02122 - - 0.000000000000000001357 88.0
BYD1_k127_4234904_0 tRNAHis guanylyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000001616 216.0
BYD1_k127_4234904_1 Alpha beta hydrolase K03929 - - 0.000000000000000000000000000176 115.0
BYD1_k127_4260941_0 PFAM Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00441 - 1.12.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 522.0
BYD1_k127_429910_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003139 320.0
BYD1_k127_429910_1 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009789 253.0
BYD1_k127_429910_2 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000002163 126.0
BYD1_k127_4302349_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 4.951e-213 684.0
BYD1_k127_4302349_1 PAS domain K06930 - - 0.000000000000000000000000000000000000000000000001285 186.0
BYD1_k127_431562_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 295.0
BYD1_k127_431562_1 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.0000000000000000000000000000000000000000000002556 179.0
BYD1_k127_431562_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000005193 83.0
BYD1_k127_431562_3 Histidine kinase - - - 0.00000201 59.0
BYD1_k127_432272_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000009111 202.0
BYD1_k127_4338292_0 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000007712 196.0
BYD1_k127_4338292_1 transcription activator, effector binding - - - 0.00000000000000000001764 94.0
BYD1_k127_4341625_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 309.0
BYD1_k127_4341625_1 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000002492 214.0
BYD1_k127_4362840_0 TIGRFAM nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 503.0
BYD1_k127_4362840_1 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000002282 209.0
BYD1_k127_4368335_0 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 387.0
BYD1_k127_4368335_1 Catalyzes the NAD( )-dependent oxidative deamination of L-alanine to pyruvate, and the reverse reaction, the reductive amination of pyruvate K19244 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 355.0
BYD1_k127_4368335_2 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004542 261.0
BYD1_k127_4390179_0 MviN-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 295.0
BYD1_k127_4399294_0 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 424.0
BYD1_k127_4399294_1 Nuclear transport factor 2 (NTF2) domain - - - 0.0000000000000000000000000000000000000000000000000001945 188.0
BYD1_k127_4404508_0 Histidine kinase - - - 3.955e-244 775.0
BYD1_k127_4404508_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000003091 241.0
BYD1_k127_4469761_0 Archaeal Type IV pilin, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000172 243.0
BYD1_k127_4489810_0 SMART PAS domain containing protein - - - 0.0000497 55.0
BYD1_k127_4503912_0 DEAD DEAH box helicase K06877 - - 4.667e-306 957.0
BYD1_k127_4503912_1 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008145 362.0
BYD1_k127_4503912_2 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000543 326.0
BYD1_k127_4503912_3 Exonuclease K07502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 327.0
BYD1_k127_4503912_4 NAD(P)H-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 295.0
BYD1_k127_4503912_5 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009689 282.0
BYD1_k127_4503912_6 PFAM Carboxymuconolactone decarboxylase K01607 - 4.1.1.44 0.00000000000000000000000000000000000000000000000000000000009405 204.0
BYD1_k127_4503912_7 Zinc-ribbon containing domain - - - 0.0000000000000000000000000000000003163 132.0
BYD1_k127_4503912_8 PFAM Desulfoferrodoxin Dfx domain protein - - - 0.0000000000000000001109 88.0
BYD1_k127_4503912_9 - - - - 0.00000001747 56.0
BYD1_k127_4504506_0 Belongs to the class-II aminoacyl-tRNA synthetase family K01892 - 6.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005346 323.0
BYD1_k127_4504506_1 AIR carboxylase K06898 - - 0.0000000000000000000000000000000000000000000000000000000000005031 216.0
BYD1_k127_4504506_2 - - - - 0.00000000000000000000000004887 110.0
BYD1_k127_4534311_0 PFAM TrkA-N domain protein K10716 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002161 253.0
BYD1_k127_4534311_1 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000001782 118.0
BYD1_k127_4554591_0 PFAM TPR repeat-containing protein K03410 - - 0.000000000000000000000000000000000000000000001988 175.0
BYD1_k127_4554591_2 Mannose-6-phosphate isomerase K01485 - 3.5.4.1 0.00000000000000000000000000000009554 127.0
BYD1_k127_4554591_3 SigmaK-factor processing regulatory protein BofA K06317 - - 0.00000000000000000000128 96.0
BYD1_k127_4571841_0 Alkyl sulfatase dimerisation - - - 1.693e-260 809.0
BYD1_k127_4571841_1 Shikimate kinase K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000006199 207.0
BYD1_k127_4579527_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000431 258.0
BYD1_k127_4602633_0 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711,K15856 - 1.1.1.281,4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 436.0
BYD1_k127_4602633_1 Glycosyl transferases group 1 - - - 0.0000000000000000000000003352 106.0
BYD1_k127_4629946_0 L-lactate permease K03303 - - 0.000000000000000000000000000000000000000000001083 167.0
BYD1_k127_4629946_1 phosphatidate phosphatase activity K19302 - 3.6.1.27 0.000000008821 64.0
BYD1_k127_4641006_0 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008198 449.0
BYD1_k127_4641006_1 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000004969 188.0
BYD1_k127_4658186_0 COG0477 Permeases of the major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002554 275.0
BYD1_k127_4665617_0 His Kinase A (phospho-acceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002378 270.0
BYD1_k127_4665617_1 Histidine kinase - - - 0.000000000000000000000002727 105.0
BYD1_k127_4666905_0 COG2226 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002521 249.0
BYD1_k127_4666905_1 PFAM Transglutaminase-like - - - 0.0000000000000000000000000000000000000000000000000000000002973 209.0
BYD1_k127_4681575_0 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008657 523.0
BYD1_k127_4681575_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009972 305.0
BYD1_k127_4681575_2 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000275 268.0
BYD1_k127_4681575_3 Involved in the binding of tRNA to the ribosomes K02946 - - 0.00000000000000000000000000000000000000000000000000000000001632 207.0
BYD1_k127_4683261_0 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 0.0 1049.0
BYD1_k127_4683261_1 Molybdopterin oxidoreductase K00201 - 1.2.7.12 3.419e-274 844.0
BYD1_k127_4683261_2 PFAM molydopterin dinucleotide-binding region K00203 - 1.2.7.12 0.0000000000000000000000000000003333 123.0
BYD1_k127_4683261_3 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.000000000000008832 74.0
BYD1_k127_4693341_0 Psort location Cytoplasmic, score - - - 0.00000000000000000000000000000000000000126 155.0
BYD1_k127_4731698_0 Glycosyl hydrolase family 57 K07405 - 3.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 503.0
BYD1_k127_4737393_0 PFAM chemotaxis sensory transducer K03406 - - 2.716e-258 820.0
BYD1_k127_4737393_1 PFAM alpha beta hydrolase fold - - - 0.000000000000002902 75.0
BYD1_k127_4737403_0 PFAM PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 300.0
BYD1_k127_474577_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 304.0
BYD1_k127_474577_1 Peptidase S9 prolyl oligopeptidase active site K01278,K01322 - 3.4.14.5,3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000005349 259.0
BYD1_k127_474577_2 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000001239 241.0
BYD1_k127_474577_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001842 231.0
BYD1_k127_4761677_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 388.0
BYD1_k127_4761677_1 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001652 277.0
BYD1_k127_4761677_2 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002707 260.0
BYD1_k127_4761677_3 Diguanylate cyclase - - - 0.00000000000000000000077 112.0
BYD1_k127_4777513_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000107 274.0
BYD1_k127_4779975_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001257 248.0
BYD1_k127_4779975_1 Uncharacterized protein domain (DUF2202) - - - 0.0000000000000000000000000000000000000000000000000000000000003468 215.0
BYD1_k127_4786764_0 - - - - 0.00000000000000000000000000000000000000000000000000006222 192.0
BYD1_k127_4795333_0 Nitrite and sulphite reductase 4Fe-4S - GO:0003674,GO:0003824,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016002,GO:0016491,GO:0016667,GO:0016673,GO:0019419,GO:0044237,GO:0050311,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 360.0
BYD1_k127_4795333_2 - K14093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000009664 239.0
BYD1_k127_4795333_3 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.000000000000000000000000000000000000000000000000000000000000000000008355 243.0
BYD1_k127_4795333_4 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000009455 228.0
BYD1_k127_4795333_5 MoaE protein K03635 - 2.8.1.12 0.0000000000000000000000000000000000000001896 158.0
BYD1_k127_4795333_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000006958 126.0
BYD1_k127_4795333_8 Endonuclease related to archaeal Holliday junction resolvase - - - 0.0000003625 52.0
BYD1_k127_4798525_0 peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 293.0
BYD1_k127_4798525_1 DEAD DEAH box helicase K03724 - - 0.00000000000000000000000000000000000002633 158.0
BYD1_k127_4829088_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.399e-203 636.0
BYD1_k127_4836570_0 Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3-diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di-O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains K17830 - 1.3.1.101,1.3.7.11 5.532e-209 655.0
BYD1_k127_4836570_1 PHP C-terminal domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 498.0
BYD1_k127_4836570_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000000003776 116.0
BYD1_k127_4836570_3 extracellular matrix structural constituent - - - 0.00000000000000000000001484 117.0
BYD1_k127_4836570_4 cell wall organization - - - 0.000000000000001011 92.0
BYD1_k127_4836570_5 PAC2 family K07159 - - 0.000000000000004894 75.0
BYD1_k127_4839327_0 Belongs to the MCM family K10726 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 424.0
BYD1_k127_4839327_1 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002865 276.0
BYD1_k127_484270_0 COG1121 ABC-type Mn Zn transport systems ATPase component K02074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 338.0
BYD1_k127_484270_1 COG1108 ABC-type Mn2 Zn2 transport systems permease components K02075,K02077,K09816 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 327.0
BYD1_k127_484270_2 formylmethanofuran dehydrogenase, subunit E - - - 0.0000000000000000000000000000000000000000000000000000000000006253 213.0
BYD1_k127_484270_3 PFAM Methyltransferase type K15256 - - 0.000000004276 61.0
BYD1_k127_4843209_0 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002689 276.0
BYD1_k127_4843209_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000001886 141.0
BYD1_k127_4843209_2 Protein of unknown function, DUF255 K06888 - - 0.0000000002045 68.0
BYD1_k127_4865951_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000218 182.0
BYD1_k127_4865951_1 Calcineurin-like phosphoesterase superfamily domain K01090 - 3.1.3.16 0.00000000000000000000000000000000000004659 153.0
BYD1_k127_4865951_2 Chagasin family peptidase inhibitor I42 K14475 - - 0.0000000000000000000001027 104.0
BYD1_k127_4886865_0 Leucine rich repeats (6 copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002826 346.0
BYD1_k127_4893042_0 Papain family cysteine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 314.0
BYD1_k127_4903193_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005655 254.0
BYD1_k127_4912176_0 Major facilitator superfamily K08223 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 538.0
BYD1_k127_4912176_1 Winged helix DNA-binding domain - - - 0.0000000000000000000000000000000000000000003584 163.0
BYD1_k127_4914828_0 PFAM Cache, type 2 domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009165 452.0
BYD1_k127_4936387_0 4Fe-4S ferredoxin, iron-sulfur binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000173 280.0
BYD1_k127_4936387_1 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis - - - 0.000000000000000000000000000000000000000000003145 167.0
BYD1_k127_4936387_2 Belongs to the UPF0251 family K06933 - - 0.000000000000000000000000000000004246 131.0
BYD1_k127_4948138_0 Uncharacterized protein conserved in archaea (DUF2114) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 321.0
BYD1_k127_4948411_0 ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000009677 243.0
BYD1_k127_4948411_1 PFAM GGDEF domain containing protein - - - 0.0000000000000125 88.0
BYD1_k127_4949581_0 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 504.0
BYD1_k127_4949581_1 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005467 426.0
BYD1_k127_4949581_2 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 338.0
BYD1_k127_4949581_3 COG0589 Universal stress protein UspA and related nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000008833 231.0
BYD1_k127_4949581_4 Catalyzes the GTP-dependent successive addition of two or more gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form coenzyme F420-0-glutamyl-glutamate (F420-2) or polyglutamated F420 derivatives K12234 - 6.3.2.31,6.3.2.34 0.000000000000000000000000000000000000000000000000000000000004414 209.0
BYD1_k127_4949581_5 Involved in protein export. The function of the beta subunit is - GO:0003674,GO:0005085,GO:0005086,GO:0005488,GO:0005515,GO:0008150,GO:0019899,GO:0051020,GO:0065007,GO:0065009,GO:0098772 - 0.0000000000000009852 78.0
BYD1_k127_4953729_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.000000000000000000000000000001802 123.0
BYD1_k127_4953729_1 - - - - 0.00000005116 59.0
BYD1_k127_4956137_0 amino acid K16263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000075 252.0
BYD1_k127_4956137_1 PFAM extracellular solute-binding protein family 3 K02030 - - 0.00000000000000000000000000000000001165 143.0
BYD1_k127_4956137_2 CBS domain - - - 0.00000000000000000000000002289 117.0
BYD1_k127_4992873_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1033.0
BYD1_k127_4992873_1 PFAM PilT protein domain protein K06865 - - 0.00000000000000000007259 88.0
BYD1_k127_4996421_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001728 253.0
BYD1_k127_5014134_0 CotH kinase protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 447.0
BYD1_k127_5014134_1 VTC domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001115 237.0
BYD1_k127_5014134_2 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000001267 231.0
BYD1_k127_5019331_0 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000004144 231.0
BYD1_k127_5019331_1 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000006015 218.0
BYD1_k127_5021009_0 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003342 507.0
BYD1_k127_5027500_0 associated with various cellular activities K03695,K03696 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001911 447.0
BYD1_k127_5027500_1 conserved protein (DUF2164) - - - 0.000000000000000000000009243 104.0
BYD1_k127_5027500_2 PFAM response regulator receiver - - - 0.000007525 49.0
BYD1_k127_5045999_0 PFAM isocitrate isopropylmalate dehydrogenase K10978 - 1.1.1.87 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005302 520.0
BYD1_k127_5045999_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 402.0
BYD1_k127_5045999_2 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 289.0
BYD1_k127_5045999_3 Hydro-lyase with broad substrate specificity for cis- unsaturated tricarboxylic acids. Catalyzes both the reversible dehydration of (R)-homocitrate ((R)-2-hydroxybutane-1,2,4- tricarboxylate) to produce cis-homoaconitate ((Z)-but-1-ene-1,2,4- tricarboxylate), and its hydration to homoisocitrate ((1R,2S)-1- hydroxybutane-1,2,4-tricarboxylate). Is also able to hydrate the analogous longer chain substrates cis-homo(2)-aconitate, cis- homo(3)-aconitate. All these reactions are part of the biosynthesis pathway of coenzyme B K16793 - 4.2.1.114 0.0000000000000000000000000000000000000000000000000000000000000000000000005306 250.0
BYD1_k127_5045999_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K16792 - 4.2.1.114 0.000000000000000000000000000000000000000000000000000000000000000000000007814 245.0
BYD1_k127_5046960_0 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 381.0
BYD1_k127_505006_0 extracellular matrix structural constituent - - - 2.464e-241 760.0
BYD1_k127_5052134_0 type II secretion system protein K07333 - - 7.681e-262 817.0
BYD1_k127_5052134_1 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003225 539.0
BYD1_k127_5052134_2 Belongs to the V-ATPase 116 kDa subunit family K02123 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 320.0
BYD1_k127_5052134_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000003076 246.0
BYD1_k127_5052134_4 type II secretion system protein K07333 - - 0.000158 45.0
BYD1_k127_5070051_0 amine dehydrogenase activity - - - 0.00000000000000000000000000000002602 139.0
BYD1_k127_5070051_1 COG1520 FOG WD40-like repeat - - - 0.000005226 55.0
BYD1_k127_5077099_0 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007363 495.0
BYD1_k127_5077099_1 Transcriptional regulator PadR-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003036 241.0
BYD1_k127_5082127_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1066.0
BYD1_k127_5113745_0 peptidase S8 and S53, subtilisin, kexin, sedolisin K06877 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008841 400.0
BYD1_k127_513484_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 3.72e-301 927.0
BYD1_k127_513484_1 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002472 522.0
BYD1_k127_513484_2 PFAM thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000002793 190.0
BYD1_k127_513484_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00821 - 2.6.1.11,2.6.1.17 0.0000000000000000000000000000000000000004771 150.0
BYD1_k127_513484_4 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000001398 100.0
BYD1_k127_5145939_0 extracellular matrix structural constituent K01385 - 3.4.23.42 0.00000000000000000000000000000000000000000000000000000000000000000000000105 253.0
BYD1_k127_5146254_0 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001541 412.0
BYD1_k127_5146254_2 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000001061 77.0
BYD1_k127_514634_0 Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups K00555 - 2.1.1.215,2.1.1.216 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 470.0
BYD1_k127_514634_1 Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids K17105 - 2.5.1.42 0.00000000000000000000000001963 112.0
BYD1_k127_5149935_0 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005169 255.0
BYD1_k127_5149935_1 Protein of unknown function (DUF4013) - - - 0.00000000000000000006798 91.0
BYD1_k127_5157286_0 TIGRFAM histone acetyltransferase, ELP3 family K07739 - 2.3.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 485.0
BYD1_k127_5157286_1 Belongs to the UPF0179 family K09730 - - 0.000000000000000000000000000000000000000000000000000000000000000005038 228.0
BYD1_k127_5157286_2 metal-binding protein - - - 0.0000000000000000000000000000000000004945 141.0
BYD1_k127_5159607_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169 - 1.2.7.1 1.685e-208 652.0
BYD1_k127_5159607_1 PFAM thiamine pyrophosphate enzyme K00170 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000832 426.0
BYD1_k127_5159607_2 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.000000000000000000000002144 102.0
BYD1_k127_5173349_0 PFAM glycosyl transferase family 39 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 330.0
BYD1_k127_5189148_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0 1099.0
BYD1_k127_5189148_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0000006437 54.0
BYD1_k127_5198234_0 Calcineurin-like phosphoesterase superfamily domain K01090 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003166 466.0
BYD1_k127_5221651_0 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 548.0
BYD1_k127_5221651_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02030 - - 0.00000000000000000000183 99.0
BYD1_k127_5235734_0 COG1361 S-layer domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003274 257.0
BYD1_k127_5235734_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000001546 245.0
BYD1_k127_5251295_0 PFAM chemotaxis sensory transducer K03406 - - 9.878e-223 714.0
BYD1_k127_5251799_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000004408 226.0
BYD1_k127_5257685_0 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 315.0
BYD1_k127_5257685_1 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000149 184.0
BYD1_k127_5257685_2 Transcriptional regulator - - - 0.000000000000000000000000000000000000000001135 158.0
BYD1_k127_5301467_0 PFAM ABC transporter related K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 330.0
BYD1_k127_5301467_1 COG1361 S-layer domain - - - 0.0000000000000000000000000000000008355 133.0
BYD1_k127_5301593_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 559.0
BYD1_k127_5301593_1 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003206 248.0
BYD1_k127_5301593_2 bis(5'-adenosyl)-triphosphatase activity K02503,K19710 - 2.7.7.53 0.00000000000000000000000000000000000000000000008529 171.0
BYD1_k127_5301593_3 AAA domain K07133 - - 0.000001449 50.0
BYD1_k127_5321528_0 COG1335 Amidases related to nicotinamidase K08281 - 3.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000713 275.0
BYD1_k127_5341804_0 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004171 272.0
BYD1_k127_5341804_1 PFAM peptidase M50 - - - 0.0000000000001612 73.0
BYD1_k127_5351603_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 5.671e-289 891.0
BYD1_k127_5351603_1 Domain of unknown function (DUF373) K08975 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006436 587.0
BYD1_k127_5351603_2 archaeal coiled-coil protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 470.0
BYD1_k127_5351603_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 450.0
BYD1_k127_5351911_0 Mitochondrial small ribosomal subunit Rsm22 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007544 333.0
BYD1_k127_5351911_1 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000207 273.0
BYD1_k127_5351911_2 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000001149 175.0
BYD1_k127_5351911_3 Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000001101 132.0
BYD1_k127_5351911_4 TPR repeat-containing protein - - - 0.0002543 44.0
BYD1_k127_5385296_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.589e-211 662.0
BYD1_k127_5391648_0 Transcriptional regulator K07722 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002694 255.0
BYD1_k127_5391648_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000009378 241.0
BYD1_k127_5391648_2 COG1073 Hydrolases of the alpha beta superfamily K06889 - - 0.0000000000000000000000000000000000000000000000002844 189.0
BYD1_k127_5391648_3 PFAM Methyltransferase type K15256 - - 0.00000000000000000000000000000000000000000000001079 179.0
BYD1_k127_5391648_4 Reduction of methyl-coenzyme M (2-(methylthio) ethanesulfonic acid) with 7-mercaptoheptanoylthreonine phosphate to methane and a heterodisulfide K00399 - 2.8.4.1 0.000001351 52.0
BYD1_k127_5403566_0 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins - - - 0.0000000000000000000000000000000000000000000000000000000000001074 217.0
BYD1_k127_5403566_1 PFAM Cache, type 2 domain protein - - - 0.0000000000000000000000000000004748 127.0
BYD1_k127_5411983_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 478.0
BYD1_k127_5411983_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000002223 219.0
BYD1_k127_5412778_0 TIGRFAM TraB family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001561 557.0
BYD1_k127_5412778_1 Belongs to the UPF0284 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 393.0
BYD1_k127_5412778_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 290.0
BYD1_k127_5412778_3 Diphthamide synthase K06927 - 6.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 285.0
BYD1_k127_5412778_4 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000187 282.0
BYD1_k127_5412778_5 Helix-turn-helix diphteria tox regulatory element - - - 0.0000000000000000000000000000000000000000000000003641 179.0
BYD1_k127_5412778_6 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000008681 171.0
BYD1_k127_5412778_7 PFAM Glutamine amidotransferase class-I - - - 0.0000000000000000000000000000000002753 139.0
BYD1_k127_5427117_0 TIGRFAM peptidase S26B, signal peptidase K13280 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007136 285.0
BYD1_k127_5427117_1 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 0.0000000000000000000001105 99.0
BYD1_k127_5433799_0 Chemotaxis signal transduction system protein F from archaea K09156 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 461.0
BYD1_k127_5433799_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003458 293.0
BYD1_k127_5433799_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004411 271.0
BYD1_k127_5433799_3 PFAM response regulator receiver K03413 - - 0.00000000000000000000000000000000000000000000000000000000000000000006288 233.0
BYD1_k127_5451805_0 Belongs to the glycosyl hydrolase 2 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 567.0
BYD1_k127_5452055_0 Transcriptional regulator - - - 0.000000000000000000000000000005805 122.0
BYD1_k127_5461423_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 2.952e-294 910.0
BYD1_k127_5461423_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 3.63e-210 662.0
BYD1_k127_5479074_0 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing K00123,K00367,K00372,K08356 - 1.17.1.9,1.20.2.1,1.20.9.1,1.7.7.2 2.287e-297 914.0
BYD1_k127_5499744_0 RibD C-terminal domain - - - 0.00000000001811 66.0
BYD1_k127_5515615_0 - - - - 0.000000000000000000000000000000000000000002151 171.0
BYD1_k127_5515615_1 Glycoside hydrolase family 28 - - - 0.00000000000000000004028 104.0
BYD1_k127_5517678_0 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 340.0
BYD1_k127_5517678_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000005871 231.0
BYD1_k127_5517678_2 PFAM periplasmic binding protein K02016 - - 0.00000000000000000000000000000000000000000000000003598 183.0
BYD1_k127_5522082_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 493.0
BYD1_k127_5522082_1 protein with SCP PR1 domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 334.0
BYD1_k127_5522082_2 Crossover junction endodeoxyribonuclease RuvC K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000002412 173.0
BYD1_k127_5522082_3 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K01006 - 2.7.9.1 0.00000000000000000000000000000000000009242 143.0
BYD1_k127_5522082_4 RuvA, C-terminal domain K03550 - 3.6.4.12 0.000000000000000000000000000000000001352 146.0
BYD1_k127_5524432_0 Clostripain family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 338.0
BYD1_k127_5526608_0 response regulator, receiver - - - 0.00000000000000000000000000000000005643 142.0
BYD1_k127_5526608_1 rubredoxin - - - 0.0000000000000000000001739 98.0
BYD1_k127_5543758_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 394.0
BYD1_k127_5543758_1 UbiA prenyltransferase family K17105 - 2.5.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 377.0
BYD1_k127_5543758_2 amino acid transport K02030 - - 0.00000000000000000000000000000000000003583 155.0
BYD1_k127_5543758_3 Mn2 dependent serine threonine protein kinase - - - 0.0000000000000000000000000004325 115.0
BYD1_k127_5543758_4 HEPN domain - - - 0.000000000000005883 78.0
BYD1_k127_5543758_5 Nucleotidyltransferase domain - - - 0.0000000003429 65.0
BYD1_k127_5543758_6 HEPN domain - - - 0.0000004489 52.0
BYD1_k127_5549172_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 305.0
BYD1_k127_5559401_0 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000006946 110.0
BYD1_k127_5559401_1 EamA-like transporter family - - - 0.0000000000000000000002094 104.0
BYD1_k127_5562396_0 Methyltransferase type 11 K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 422.0
BYD1_k127_5562396_1 Nitroreductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005039 246.0
BYD1_k127_5562396_2 GrpB protein - - - 0.000000000000000000000000000001733 132.0
BYD1_k127_5562396_3 Peptidase C39 family K06992 - - 0.00000000000000000004786 96.0
BYD1_k127_5565130_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000004231 236.0
BYD1_k127_5565130_1 protein conserved in archaea - - - 0.00000000000000000000000000000002469 128.0
BYD1_k127_5577383_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 335.0
BYD1_k127_5586152_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 2.878e-315 970.0
BYD1_k127_5586152_1 DegT/DnrJ/EryC1/StrS aminotransferase family K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 376.0
BYD1_k127_5586236_0 PFAM PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 610.0
BYD1_k127_5586236_1 Methanogenesis marker protein 8 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 327.0
BYD1_k127_5586236_2 - - - - 0.0000000000000000000000000000000000000000000000000000000002882 214.0
BYD1_k127_5599013_0 Formylmethanofuran dehydrogenase, subunit B K00201 - 1.2.7.12 2.517e-256 794.0
BYD1_k127_5599013_1 PFAM molydopterin dinucleotide-binding region K00203 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000002967 210.0
BYD1_k127_5599013_2 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 0.0000000000000000000000000000000000000000000001222 169.0
BYD1_k127_5603505_0 Methyltransferase domain K15256 - - 0.0000000000000000000000000000000000000000104 158.0
BYD1_k127_5603505_1 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000003047 147.0
BYD1_k127_5603505_2 Alpha beta hydrolase superfamily K01563 - 3.8.1.5 0.00000000000000000000000000000000001959 137.0
BYD1_k127_5603505_3 ubiE/COQ5 methyltransferase family - - - 0.0000000000000307 76.0
BYD1_k127_5610290_0 AAA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000002893 241.0
BYD1_k127_5619254_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 374.0
BYD1_k127_5619254_1 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000002162 166.0
BYD1_k127_5625041_0 Helix-turn-helix domain - - - 0.00001158 48.0
BYD1_k127_5656360_0 Pfam:DUF1628 - - - 0.000000000000000000000000003705 114.0
BYD1_k127_5656360_1 TIGRFAM archaeal flagellin N-terminal-like domain - - - 0.000000000000005914 78.0
BYD1_k127_5661620_0 PFAM nucleic acid binding, OB-fold, tRNA helicase-type K07466 - - 4.687e-197 640.0
BYD1_k127_5661620_1 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K02858 - 4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 363.0
BYD1_k127_5661620_2 Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN) K07732 - 2.7.1.161 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 312.0
BYD1_k127_5661620_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000000000004212 220.0
BYD1_k127_5661620_4 protein conserved in archaea K09746 - - 0.000000000000000000000000000000000000000000000000000000000001311 214.0
BYD1_k127_5661620_5 PFAM Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.00000000000000000000000000000000000000000000000000007646 196.0
BYD1_k127_5661620_6 Cysteine-rich small domain K08260 - 3.5.1.90 0.000000000000000000000000000000000000007634 149.0
BYD1_k127_5661620_7 - - - - 0.0000000000531 63.0
BYD1_k127_5665399_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000003202 113.0
BYD1_k127_5665399_1 TIGRFAM PAS sensor protein - - - 0.00000000000000000000008515 98.0
BYD1_k127_5682717_0 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000001261 156.0
BYD1_k127_5682717_1 TIGRFAM hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000000000000000000008577 125.0
BYD1_k127_5688626_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000005392 165.0
BYD1_k127_5727788_0 Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing growth on acetate as sole source of carbon and energy. The alpha-epsilon complex generates CO from CO(2), while the beta subunit (this protein) combines the CO with CoA and a methyl group to form acetyl-CoA. The methyl group, which is incorporated into acetyl-CoA, is transferred to the beta subunit by a corrinoid iron-sulfur protein (the gamma-delta complex) K00193 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 541.0
BYD1_k127_5727788_1 Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha- epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear K00195 - - 0.0000000000000000000000000000001802 126.0
BYD1_k127_5744403_0 membrane protein (DUF2178) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001009 233.0
BYD1_k127_5744403_1 PAS domain - - - 0.0000000000000000000000000000000000000000000000000002141 188.0
BYD1_k127_5744403_2 Helix-turn-helix domain K07729 - - 0.00000000000003303 75.0
BYD1_k127_5750429_0 TPR repeat-containing protein - - - 1.428e-270 850.0
BYD1_k127_5750429_1 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004011 275.0
BYD1_k127_5750429_2 response regulator, receiver K02658,K03413 - - 0.00000000000000000000000000000000000339 140.0
BYD1_k127_5750429_3 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 0.0000000000000000001589 88.0
BYD1_k127_5751126_0 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0 1102.0
BYD1_k127_5751126_1 Proton-conducting membrane transporter K05565,K12137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005099 297.0
BYD1_k127_5751126_2 Hydrogenase maturation protease K08315 - 3.4.23.51 0.00000000000000000000000000000000000000002826 157.0
BYD1_k127_575971_0 PFAM Aldehyde dehydrogenase K00130,K00135 - 1.2.1.16,1.2.1.20,1.2.1.79,1.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003431 547.0
BYD1_k127_575971_1 Periplasmic copper-binding protein (NosD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 533.0
BYD1_k127_575971_2 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 439.0
BYD1_k127_575971_3 Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin K01151 - 3.1.21.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 341.0
BYD1_k127_575971_4 PFAM LemA family K03744 - - 0.000000000000000000000000000000000000000002275 156.0
BYD1_k127_5763127_0 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004634 440.0
BYD1_k127_5763127_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002037 259.0
BYD1_k127_5763127_2 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000008002 156.0
BYD1_k127_5767298_0 PBS lyase HEAT-like repeat K22221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 297.0
BYD1_k127_5767298_1 aspartate ornithine carbamoyltransferase, carbamoyl-P binding domain K00609 - 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000001556 239.0
BYD1_k127_5767298_2 PBS lyase HEAT-like repeat K22221 - - 0.000000005986 59.0
BYD1_k127_5776631_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001029 268.0
BYD1_k127_5778532_0 Catalyzes the reversible interconversion of 5-formyl- H(4)MPT to methenyl-H(4)MPT( K01499 - 3.5.4.27 1.516e-194 609.0
BYD1_k127_5778532_1 May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity K06965 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003984 464.0
BYD1_k127_5778532_2 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 374.0
BYD1_k127_5778532_3 PFAM Xylose isomerase domain protein TIM barrel K18910 - 5.1.3.30,5.1.3.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 354.0
BYD1_k127_5778532_4 Involved in regulation of DNA replication K10725 - - 0.000000000000000000000000000000000000000000005159 166.0
BYD1_k127_5778532_5 Domain of unknown function (DUF1858) - - - 0.00000000000000000000000001345 110.0
BYD1_k127_5778532_6 Domain of unknown function (DUF814) - - - 0.000000000001294 68.0
BYD1_k127_5788909_0 COG3547 Transposase and inactivated derivatives - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002691 413.0
BYD1_k127_5813775_0 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 301.0
BYD1_k127_5822921_0 AAA ATPase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003838 364.0
BYD1_k127_5823349_0 amino acid K16263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 481.0
BYD1_k127_5823349_1 Sulphur transport K07112 - - 0.000000005667 58.0
BYD1_k127_5828197_0 AMP-binding enzyme C-terminal domain K05939 - 2.3.1.40,6.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009499 464.0
BYD1_k127_5828197_1 Putative DNA-binding domain - - - 0.0000002101 55.0
BYD1_k127_5848418_0 PFAM ABC-2 type transporter K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 381.0
BYD1_k127_5848418_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000007601 258.0
BYD1_k127_5848418_2 TIGRFAM daunorubicin resistance ABC transporter K01990 - - 0.00000000000000000000000002977 110.0
BYD1_k127_5860076_0 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000633 357.0
BYD1_k127_5860076_1 response regulator, receiver K07669 - - 0.0000000000000000000001775 97.0
BYD1_k127_586985_0 COG1234 Metal-dependent hydrolases of the beta-lactamase superfamily III K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 310.0
BYD1_k127_586985_1 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001369 235.0
BYD1_k127_586985_2 PFAM Carbon starvation protein CstA K06200 - - 0.00000000000000000000000000000000000002702 146.0
BYD1_k127_5878952_0 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008764 558.0
BYD1_k127_5878952_1 Cytochrome C biogenesis protein transmembrane region K06196 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 298.0
BYD1_k127_5878952_2 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000009306 175.0
BYD1_k127_5878952_3 Involved in the catabolism of quinolinic acid (QA) K00767 - 2.4.2.19 0.000000000000000000000000007136 111.0
BYD1_k127_5878952_4 nucleic acid binding OB-fold tRNA helicase-type - - - 0.000000000000000005186 88.0
BYD1_k127_5881556_0 PFAM chemotaxis sensory transducer K03406 - - 0.0 1038.0
BYD1_k127_5881556_1 Uncharacterised conserved protein UCP033563 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 563.0
BYD1_k127_5881556_2 PFAM SCP-like extracellular - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 310.0
BYD1_k127_5881556_3 TIGRFAM ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.00000000000000000000000000000000000000000000000000000008755 199.0
BYD1_k127_5893150_0 PFAM Radical SAM domain protein K06937 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008925 529.0
BYD1_k127_5893150_1 Peptidase S9 prolyl oligopeptidase active site K01278,K01322 - 3.4.14.5,3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 377.0
BYD1_k127_5893150_2 PFAM Radical SAM domain protein K06937 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009213 268.0
BYD1_k127_5893150_3 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000005353 223.0
BYD1_k127_5893150_4 Catalyzes the formation of CDP-2,3-bis-(O- geranylgeranyl)-sn-glycerol (CDP-archaeol) from 2,3-bis-(O- geranylgeranyl)-sn-glycerol 1-phosphate (DGGGP) and CTP. This reaction is the third ether-bond-formation step in the biosynthesis of archaeal membrane lipids K19664 - 2.7.7.67 0.0000000000000000000002427 104.0
BYD1_k127_5893150_5 RimK domain protein ATP-grasp K05844,K15740 - 6.3.2.33 0.000000000000000009884 83.0
BYD1_k127_589652_0 CO dehydrogenase/acetyl-CoA synthase delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000312 295.0
BYD1_k127_589652_1 PFAM PKD domain containing protein - - - 0.00000000000000000000000000000000000000111 166.0
BYD1_k127_589652_2 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000002948 131.0
BYD1_k127_5912769_0 Ferrous iron transport B domain protein K04759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003903 483.0
BYD1_k127_5921014_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004745 340.0
BYD1_k127_593098_0 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000004786 251.0
BYD1_k127_593098_1 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000004434 155.0
BYD1_k127_5931043_1 PFAM DNA polymerase beta domain protein region K07075 - - 0.0000000002409 65.0
BYD1_k127_5931043_2 PFAM Stigma-specific protein, Stig1 - - - 0.0000000003041 67.0
BYD1_k127_5931043_3 Protein of unknown function DUF86 - - - 0.00001321 49.0
BYD1_k127_5933433_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001568 252.0
BYD1_k127_5933433_1 PFAM Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000001349 244.0
BYD1_k127_5934550_0 serine threonine protein kinase K00870,K08884 - 2.7.1.37,2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000715 490.0
BYD1_k127_5934550_1 Serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 334.0
BYD1_k127_5960057_0 ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 319.0
BYD1_k127_5960057_1 Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006305 258.0
BYD1_k127_5960057_2 Archaeal Type IV pilin, N-terminal - - - 0.00000000000000000000000001641 117.0
BYD1_k127_5960057_3 metallopeptidase activity - - - 0.00000000000000001308 85.0
BYD1_k127_5960471_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000009777 224.0
BYD1_k127_5960471_1 protein containing a NRPS condensation (Elongation) domain - - - 0.00000000006539 73.0
BYD1_k127_596137_0 Papain family cysteine protease K14647 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 345.0
BYD1_k127_596137_1 CheC inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000000000000000000000000000004311 239.0
BYD1_k127_596137_2 RNA recognition motif - - - 0.000000000000000000000000000000000000006057 147.0
BYD1_k127_5963708_0 Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre- initiation complex (DNA-TBP-TFIIB) K03124 - - 1.861e-205 640.0
BYD1_k127_5963708_1 SMART phosphoesterase PHP domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 308.0
BYD1_k127_5963708_2 RNA-binding protein involved in rRNA processing K07569 - - 0.0000000000000000001032 91.0
BYD1_k127_5973199_0 Peptidase family M13 K07386 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000007957 256.0
BYD1_k127_5973199_1 Mediates influx of magnesium ions K03284 GO:0003674,GO:0005488,GO:0005515,GO:0042802 - 0.00000000000000000000000000000000000000000001834 163.0
BYD1_k127_5973199_2 Helix-turn-helix XRE-family like proteins K07729 - - 0.0000000000000000000000007042 107.0
BYD1_k127_5973199_3 - - - - 0.0000000000000000000009765 102.0
BYD1_k127_5978247_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000146 236.0
BYD1_k127_5978247_1 RibD C-terminal domain - - - 0.0000000000000000000000000005342 116.0
BYD1_k127_5991944_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 368.0
BYD1_k127_5991944_1 - - - - 0.00000000000000005817 81.0
BYD1_k127_6009477_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001061 259.0
BYD1_k127_6042255_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 2.682e-266 825.0
BYD1_k127_6042255_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009176 269.0
BYD1_k127_6042255_2 - - - - 0.000000000000000000000000000000000000005782 147.0
BYD1_k127_6042255_3 Helix-turn-helix domain - - - 0.00000000000000000000000002252 117.0
BYD1_k127_6044093_0 HxlR-like helix-turn-helix - - - 0.0000000000000000000000000000000000000000000000004617 177.0
BYD1_k127_6044093_1 - K02035 - - 0.0000000000000001864 89.0
BYD1_k127_6059362_0 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant K07025 - - 0.000000000000000000000000000000000000000013 158.0
BYD1_k127_6059362_1 integral membrane protein - - - 0.00000000000000000001182 102.0
BYD1_k127_6059472_0 Ferrous iron transport protein B K04759 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001358 609.0
BYD1_k127_6059472_1 FmdE, Molybdenum formylmethanofuran dehydrogenase operon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 602.0
BYD1_k127_6059472_2 - - - - 0.000000000000000000000000000000293 132.0
BYD1_k127_6059472_4 PFAM periplasmic binding protein K02016 - - 0.0000000005415 61.0
BYD1_k127_6059472_5 ATP-binding region, ATPase domain protein domain protein K03709 - - 0.0002177 44.0
BYD1_k127_6060515_0 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 462.0
BYD1_k127_6060515_1 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000799 336.0
BYD1_k127_6060515_2 Catalyzes the formation of S-adenosylmethionine from methionine and ATP K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000007934 258.0
BYD1_k127_6060515_3 PFAM Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.00000000000000000000000000000000000000000000000000000000737 202.0
BYD1_k127_6062062_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003523 308.0
BYD1_k127_6062062_1 PFAM response regulator receiver - - - 0.0000000000000000005773 102.0
BYD1_k127_6082211_0 Histone deacetylase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003296 547.0
BYD1_k127_6082211_1 PFAM beta-lactamase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001773 252.0
BYD1_k127_608708_0 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000005966 220.0
BYD1_k127_608708_1 Tyrosine phosphatase family - - - 0.000000000003464 70.0
BYD1_k127_6089090_0 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000001179 203.0
BYD1_k127_6089090_1 PQ loop repeat K15383 - - 0.00000000000000000000001008 102.0
BYD1_k127_6089424_0 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 510.0
BYD1_k127_6089424_1 Phosphate transport regulator K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 325.0
BYD1_k127_6112441_0 Structure-specific nuclease with 5'-flap endonuclease and 5'-3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double- stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair (BER) pathway. Acts as a genome stabilization factor that prevents flaps from equilibrating into K04799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009928 473.0
BYD1_k127_6112441_1 SMART Peptidase A22, presenilin signal peptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005711 256.0
BYD1_k127_6143147_0 Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA K03265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 357.0
BYD1_k127_6143147_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01887 - 6.1.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 347.0
BYD1_k127_6147882_0 PFAM ABC transporter K02017,K15497 - 3.6.3.29,3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007419 336.0
BYD1_k127_6147882_1 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002716 308.0
BYD1_k127_6147882_2 PFAM binding-protein-dependent transport systems inner membrane component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003953 266.0
BYD1_k127_6147882_3 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.000000000000000000000000009148 111.0
BYD1_k127_6147882_4 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis - - - 0.0000000000000000000461 94.0
BYD1_k127_6167692_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001948 299.0
BYD1_k127_6168911_0 TIGRFAM MIP family channel K02440,K06188 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 377.0
BYD1_k127_6168911_1 Uncharacterized protein conserved in archaea (DUF2180) - - - 0.00000000000000000000000000000002642 126.0
BYD1_k127_6171438_0 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007476 305.0
BYD1_k127_6171438_1 protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000002251 168.0
BYD1_k127_6176461_2 PFAM PKD domain containing protein - - - 0.000000000000000000000002424 110.0
BYD1_k127_6186351_0 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007535 557.0
BYD1_k127_6192540_0 methyl-accepting chemotaxis protein K03406 - - 8.459e-250 789.0
BYD1_k127_6192540_1 Chemotaxis signal transduction protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000003266 213.0
BYD1_k127_6192540_2 PFAM response regulator receiver - - - 0.000000000000000000000000006593 111.0
BYD1_k127_6202792_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03041 - 2.7.7.6 0.0 1037.0
BYD1_k127_6202792_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03044 - 2.7.7.6 9.051e-196 611.0
BYD1_k127_6227338_0 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000007318 185.0
BYD1_k127_6227338_1 PFAM YHS domain K01533,K17686 - 3.6.3.4,3.6.3.54 0.000000000000000000001105 94.0
BYD1_k127_6227338_3 Protein of unknown function (DUF2892) - - - 0.000000000008742 67.0
BYD1_k127_6235043_0 PFAM Ppx GppA phosphatase K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 296.0
BYD1_k127_6235043_1 PFAM NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001738 241.0
BYD1_k127_6235043_2 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.000000000000000000000000003726 113.0
BYD1_k127_623854_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 372.0
BYD1_k127_623854_1 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 308.0
BYD1_k127_623854_2 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000009909 117.0
BYD1_k127_6243370_0 PFAM PKD domain containing protein - - - 1.527e-256 804.0
BYD1_k127_6243370_1 ICC-like phosphoesterases K06953 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 317.0
BYD1_k127_6243370_2 protein conserved in archaea K09746 - - 0.000000000000000000000000000002098 131.0
BYD1_k127_6245667_0 Functions by promoting the formation of the first peptide bond K03263 - - 0.0000000000000000000000000000000000000000000000000000000002403 204.0
BYD1_k127_6245667_1 PFAM Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000001803 160.0
BYD1_k127_6245667_2 - - - - 0.0000004287 56.0
BYD1_k127_6249892_0 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001212 253.0
BYD1_k127_6249892_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000005712 57.0
BYD1_k127_6253442_0 PAS domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003983 284.0
BYD1_k127_6253442_1 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor - - - 0.0000000000000000000000000000000000000000000000000004249 202.0
BYD1_k127_6253442_2 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000003518 108.0
BYD1_k127_6253442_3 His Kinase A (phosphoacceptor) domain - - - 0.00000000000005539 83.0
BYD1_k127_6262965_0 PFAM chemotaxis sensory transducer K03406 - - 1.247e-202 649.0
BYD1_k127_6262965_1 diguanylate cyclase (GGDEF) domain - - - 0.00005941 48.0
BYD1_k127_6268062_0 PFAM tRNA methyltransferase complex GCD14 subunit K07442 - 2.1.1.219,2.1.1.220 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002573 334.0
BYD1_k127_6268062_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 290.0
BYD1_k127_6268062_2 Contacts the emerging nascent chain on the ribosome K03626 - - 0.0000000000000000000000009174 104.0
BYD1_k127_6278800_0 oligoendopeptidase F - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003465 583.0
BYD1_k127_6281971_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 6.175e-233 724.0
BYD1_k127_6281971_1 Ammonium Transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 580.0
BYD1_k127_6281971_2 Belongs to the P(II) protein family K04751 - - 0.000000000000000000000000000000000000000000000000008201 181.0
BYD1_k127_6281971_3 DEAD DEAH box helicase domain protein K03725 - - 0.0000000000000000000000000002476 117.0
BYD1_k127_6292319_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 384.0
BYD1_k127_6301488_0 nucleic acid-binding protein contains PIN domain K07063 - - 0.00000000000000000000000000000000000000000158 160.0
BYD1_k127_6317570_0 TPR repeat-containing protein - - - 2.483e-196 619.0
BYD1_k127_6317570_1 Catalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) K11781 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 543.0
BYD1_k127_6317570_2 Intracellular protease K05520 - 3.5.1.124 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 323.0
BYD1_k127_6317570_4 low-complexity proteins - - - 0.000000000000000000000000000000000000000000000000002316 189.0
BYD1_k127_632034_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.242e-306 953.0
BYD1_k127_632034_1 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 5.003e-194 622.0
BYD1_k127_632034_2 FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.000000000000000000000000000000005084 134.0
BYD1_k127_6326406_0 COG0380 Trehalose-6-phosphate synthase K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 391.0
BYD1_k127_6326406_1 EamA-like transporter family - - - 0.00000000000000000000000000000002623 138.0
BYD1_k127_6326406_2 COG0380 Trehalose-6-phosphate synthase K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.0000000000000000005202 90.0
BYD1_k127_6341642_0 Putative threonine/serine exporter - - - 0.000267 51.0
BYD1_k127_6345462_0 peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.000000000000000000000000000000000000000000000000000000000000002049 221.0
BYD1_k127_6345462_1 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.00001688 53.0
BYD1_k127_6345856_0 COG1361 S-layer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004952 395.0
BYD1_k127_6377729_0 PFAM phosphoesterase, RecJ domain protein K07463 - - 4.691e-235 734.0
BYD1_k127_6377729_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 527.0
BYD1_k127_6377729_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000002421 180.0
BYD1_k127_6377729_3 Contacts the emerging nascent chain on the ribosome K03626 - - 0.00000000000000000000000000000000000009963 142.0
BYD1_k127_6377729_4 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.48 0.0000000000000000000000000000000221 131.0
BYD1_k127_639633_0 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004658 424.0
BYD1_k127_6403371_0 PFAM CBS domain - - - 5.244e-229 713.0
BYD1_k127_6403371_1 - - - - 0.00000000168 59.0
BYD1_k127_6438938_0 PFAM conserved K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 428.0
BYD1_k127_6438938_1 PFAM Ribonuclease III K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000002684 188.0
BYD1_k127_6457841_0 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 2.296e-215 682.0
BYD1_k127_6457841_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000002244 70.0
BYD1_k127_6457841_2 PFAM low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000001761 66.0
BYD1_k127_6458877_0 PFAM cobalamin (vitamin B12) biosynthesis CbiG protein K02189 - 3.7.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 332.0
BYD1_k127_6458877_1 PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K05934 - 2.1.1.131 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 321.0
BYD1_k127_6458877_2 PFAM Precorrin-8X methylmutase CbiC CobH K06042 - 5.4.99.60,5.4.99.61 0.00000000000000006966 85.0
BYD1_k127_646300_0 KH, type 1, domain K07041 - - 2.437e-291 897.0
BYD1_k127_646300_1 Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation K03433 - 3.4.25.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003228 302.0
BYD1_k127_6477661_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.364e-237 745.0
BYD1_k127_6481528_0 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 321.0
BYD1_k127_6484564_0 Catalyzes the formation of S-adenosylmethionine from methionine and ATP K00789 - 2.5.1.6 3.364e-205 642.0
BYD1_k127_6484564_1 O-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 329.0
BYD1_k127_6484564_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002588 272.0
BYD1_k127_6492554_0 - - - - 0.0000000000000000000000000000000000000000000000002391 188.0
BYD1_k127_6492554_1 - - - - 0.0000000007375 66.0
BYD1_k127_6492554_2 - - - - 0.0000005674 56.0
BYD1_k127_6494162_0 Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication K04802 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003475 383.0
BYD1_k127_6494162_1 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000007632 228.0
BYD1_k127_6494162_2 Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K18882 - - 0.000000000001381 69.0
BYD1_k127_6513728_0 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing K00123,K00367,K00372,K08356 - 1.17.1.9,1.20.2.1,1.20.9.1,1.7.7.2 0.0 1234.0
BYD1_k127_6513728_1 Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00125 - 1.17.1.9 1.657e-256 794.0
BYD1_k127_6513728_2 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 3.445e-245 764.0
BYD1_k127_6513728_3 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000007731 198.0
BYD1_k127_6534234_0 Metallo-beta-lactamase superfamily K02238 - - 0.0000000000000002991 91.0
BYD1_k127_6549069_0 Right handed beta helix region - - - 0.0002017 53.0
BYD1_k127_6550636_0 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.0 1034.0
BYD1_k127_6550636_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.0000006466 52.0
BYD1_k127_6570434_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003631 275.0
BYD1_k127_6570434_1 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000001013 131.0
BYD1_k127_6573924_0 PFAM Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003963 595.0
BYD1_k127_6573924_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 - 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004851 449.0
BYD1_k127_6573924_2 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 334.0
BYD1_k127_6573924_3 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001961 244.0
BYD1_k127_6573924_4 Methylase involved in ubiquinone menaquinone biosynthesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000001404 240.0
BYD1_k127_6574981_0 Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Rad50 controls the balance between DNA end bridging and DNA resection via ATP-dependent structural rearrangements of the Rad50 Mre11 complex K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001533 297.0
BYD1_k127_6574981_1 PFAM PKD domain containing protein - - - 0.0000000000000000000000001212 124.0
BYD1_k127_6574981_2 Belongs to the thymidylate synthase family. Archaeal- type ThyA subfamily K00560 - 2.1.1.45 0.0000000000000000000005987 106.0
BYD1_k127_6574981_3 Putative molybdenum carrier - - - 0.000000000000000004328 91.0
BYD1_k127_6574981_4 PEP-utilising enzyme, TIM barrel domain K01007 - 2.7.9.2 0.000000000005082 74.0
BYD1_k127_6574981_5 Domain of unknown function (DUF4326) - - - 0.00000000007996 66.0
BYD1_k127_6576918_0 Belongs to the NifD NifK NifE NifN family K02587 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 520.0
BYD1_k127_6576918_1 Belongs to the NifD NifK NifE NifN family K02592 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001406 294.0
BYD1_k127_6580369_0 ATP-binding region, ATPase domain protein K03407 - 2.7.13.3 3.123e-209 676.0
BYD1_k127_6580369_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 372.0
BYD1_k127_6580369_2 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 332.0
BYD1_k127_6580369_3 ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000007023 139.0
BYD1_k127_6584966_0 PFAM LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000003039 190.0
BYD1_k127_6584966_1 Response regulator receiver domain K03413 - - 0.000000000000000000000000000000000000009012 149.0
BYD1_k127_6586601_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000000000000003582 121.0
BYD1_k127_6590102_0 Pyruvate kinase, alpha/beta domain K09126 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003685 320.0
BYD1_k127_6590102_1 TGS domain protein K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 313.0
BYD1_k127_6591449_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 3.308e-219 699.0
BYD1_k127_6593625_0 Alcohol acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 339.0
BYD1_k127_6593625_1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.0000000000000000000000000000000000000000000326 165.0
BYD1_k127_6593625_2 Domain of unknown function (DUF1805) - - - 0.000000000000000000000000011 111.0
BYD1_k127_6593625_3 COG1361 S-layer domain - - - 0.0000000000000000000021 96.0
BYD1_k127_6593625_4 Glycosyl transferase 4-like domain - - - 0.00000000000000002947 84.0
BYD1_k127_6593625_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07709 - 2.7.13.3 0.000000001133 68.0
BYD1_k127_6596642_0 - - - - 0.000000000000000000000000000000000000000000000003273 177.0
BYD1_k127_6596642_1 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000005658 108.0
BYD1_k127_6601478_0 PFAM Carbon starvation protein CstA K06200 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007481 355.0
BYD1_k127_6601478_1 COG1403 Restriction endonuclease K07454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001203 279.0
BYD1_k127_6601478_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000002818 203.0
BYD1_k127_6607193_0 Regulatory protein MarR - - - 0.000000000000000000002084 100.0
BYD1_k127_6607193_1 COG1361 S-layer domain - - - 0.0000000000000000001495 93.0
BYD1_k127_6642773_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 412.0
BYD1_k127_6642773_1 PFAM Radical SAM domain protein K02585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 360.0
BYD1_k127_6642773_2 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000000001161 204.0
BYD1_k127_6642773_3 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000000002255 198.0
BYD1_k127_6642773_4 integral membrane protein - - - 0.00000000000000000000000000000000000000000000000000002383 199.0
BYD1_k127_6650836_0 Histidine kinase-like ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 468.0
BYD1_k127_6650836_1 DEAD DEAH box helicase domain protein K10896 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 291.0
BYD1_k127_6663184_0 COG0380 Trehalose-6-phosphate synthase K00697,K16055 - 2.4.1.15,2.4.1.347,3.1.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 301.0
BYD1_k127_6663184_1 PFAM alpha amylase catalytic region K05343 - 3.2.1.1,5.4.99.16 0.000000000000000000000000000006272 123.0
BYD1_k127_6671523_0 PFAM GHMP kinase K06982 - 2.7.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 303.0
BYD1_k127_6671523_1 Pfam:DUF137 K09722 - 6.3.2.36 0.000000000000000000000000000000000000000000000000000000000000000000002015 239.0
BYD1_k127_6671523_2 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000003915 67.0
BYD1_k127_6694809_0 SMART DNA-directed DNA polymerase B K02319 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008402 495.0
BYD1_k127_6694809_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of Ni- sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 379.0
BYD1_k127_669580_0 PFAM TrkA-N domain K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 313.0
BYD1_k127_669580_1 COG0569 K transport systems NAD-binding component K03499 - - 0.00000000000000000000000000000000000000000000000000001872 189.0
BYD1_k127_6697989_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002345 404.0
BYD1_k127_6703984_0 PFAM Sulfate transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003606 421.0
BYD1_k127_6703984_1 PFAM NADH ubiquinone oxidoreductase, 20 - - - 0.000000000000000000000000000000000000000000000000000000000026 210.0
BYD1_k127_6703984_2 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.000000000000000000000000000000000000000000000000002334 185.0
BYD1_k127_6703984_3 PFAM phosphatidate cytidylyltransferase - - - 0.000000000000000000000000000000000000000000001699 170.0
BYD1_k127_6703984_4 PFAM response regulator receiver - - - 0.0000000000000000000000000316 117.0
BYD1_k127_6710318_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 1.207e-206 646.0
BYD1_k127_6710318_1 COG0187 Type IIA topoisomerase (DNA gyrase topo II topoisomerase IV) B subunit K02470 GO:0003674,GO:0003824,GO:0003916,GO:0003918,GO:0008094,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0034335,GO:0042623,GO:0061505,GO:0140097 5.99.1.3 0.000000000000000000000000000000000000000000000000000001256 195.0
BYD1_k127_6713287_0 Methylase of chemotaxis methyl-accepting K00575 - 2.1.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003531 355.0
BYD1_k127_6713287_1 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000009485 160.0
BYD1_k127_6713287_2 Two component signalling adaptor domain K03408 - - 0.000000000000000000001808 98.0
BYD1_k127_67227_0 transferase hexapeptide repeat containing protein K00973 - 2.7.7.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004125 461.0
BYD1_k127_67227_1 PFAM transferase hexapeptide repeat containing protein K04042 - 2.3.1.157,2.7.7.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001692 437.0
BYD1_k127_67227_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.0000000000000699 71.0
BYD1_k127_6737658_0 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 401.0
BYD1_k127_6737658_1 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000002989 232.0
BYD1_k127_6739287_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 8.486e-246 760.0
BYD1_k127_6739287_1 Papain family cysteine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000003817 230.0
BYD1_k127_6739287_2 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000002234 190.0
BYD1_k127_6771791_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 8.88e-224 713.0
BYD1_k127_6771791_1 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000006998 205.0
BYD1_k127_6773788_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000001193 226.0
BYD1_k127_6774417_0 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 486.0
BYD1_k127_6802172_0 acetyltransferase - - - 0.000000000000000000000001103 118.0
BYD1_k127_6804398_0 Serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000001486 217.0
BYD1_k127_6812088_0 regulatory protein, arsR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 387.0
BYD1_k127_6812088_1 MTH865-like family - - - 0.000000000000000000000000000000000001594 139.0
BYD1_k127_6812088_2 MTH865-like family - - - 0.0000000000001725 72.0
BYD1_k127_6812088_3 PAS domain K03406 - - 0.0000000000006027 71.0
BYD1_k127_6822751_0 AAA-like domain K06915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 578.0
BYD1_k127_6822751_1 Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L-cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)) K06868 - 2.5.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 532.0
BYD1_k127_6822751_2 - K06868 - 2.5.1.73 0.000000000002927 68.0
BYD1_k127_6826361_0 PFAM TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001073 264.0
BYD1_k127_6826361_1 Probably functions as a manganese efflux pump - - - 0.0000000000000000000000000000000000000000001728 165.0
BYD1_k127_6847483_0 parallel beta-helix repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008732 293.0
BYD1_k127_687394_0 amino acid K16263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008215 345.0
BYD1_k127_687673_0 His Kinase A (phospho-acceptor) domain - - - 1.299e-219 694.0
BYD1_k127_687673_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000003068 201.0
BYD1_k127_687673_2 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000008464 194.0
BYD1_k127_6880536_0 SMART Elongator protein 3 MiaB NifB K22226 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 500.0
BYD1_k127_6880536_1 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000004273 123.0
BYD1_k127_6887654_0 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 409.0
BYD1_k127_6887654_1 PFAM Sulfate transporter antisigma-factor antagonist STAS - - - 0.0000000000000000000000000000009519 126.0
BYD1_k127_6887654_2 Chagasin family peptidase inhibitor I42 K14475 - - 0.00000000000003446 78.0
BYD1_k127_6893247_0 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 3.613e-209 653.0
BYD1_k127_6893247_1 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K07342 - - 0.00000000000000003761 81.0
BYD1_k127_6896989_0 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing K00123,K00367,K00372,K08356 - 1.17.1.9,1.20.2.1,1.20.9.1,1.7.7.2 0.0 1277.0
BYD1_k127_6896989_1 Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00125 - 1.17.1.9 9.208e-248 767.0
BYD1_k127_6896989_2 PFAM formate nitrite transporter K21993 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009809 308.0
BYD1_k127_6896989_3 Pas domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001402 253.0
BYD1_k127_6896989_4 PFAM nucleic acid binding, OB-fold, tRNA helicase-type - - - 0.00000000000000000000000000000000000000000000000000000000008845 208.0
BYD1_k127_6901106_0 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002657 300.0
BYD1_k127_6901106_2 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 0.000000000000000001357 87.0
BYD1_k127_6904867_0 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000744 173.0
BYD1_k127_6904867_1 Pas domain s-box - - - 0.00000000000000000000000000000004857 136.0
BYD1_k127_6905689_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 0.000000000000000000000000000000000000000000002082 167.0
BYD1_k127_6905689_1 - - - - 0.0000000000000000000000000000008448 123.0
BYD1_k127_6905689_2 Transglutaminase-like superfamily - - - 0.0000000007689 67.0
BYD1_k127_6915500_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000000000003839 218.0
BYD1_k127_6915500_1 metallopeptidase activity K01385 - 3.4.23.42 0.00000000000000000002663 98.0
BYD1_k127_6917646_0 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005022 292.0
BYD1_k127_6917646_2 Domain of unknown function (DUF333) K09712 - - 0.000001224 55.0
BYD1_k127_6930899_0 archaeosine synthase activity K07557 - 2.6.1.97 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002735 301.0
BYD1_k127_6930899_1 Thiol disulfide interchange protein K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000007718 164.0
BYD1_k127_6930899_2 ThiS family K03636 - - 0.00000000000000533 76.0
BYD1_k127_6930899_3 Fumarase C C-terminus K01679,K01744 - 4.2.1.2,4.3.1.1 0.0000008746 52.0
BYD1_k127_694412_0 PFAM Phosphoribosylglycinamide synthetase K01945 - 6.3.4.13 1.393e-195 619.0
BYD1_k127_694412_1 Belongs to the ATCase OTCase family K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000003921 213.0
BYD1_k127_6948162_0 Belongs to the LDH MDH superfamily K00024 - 1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001739 511.0
BYD1_k127_6948162_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000059 288.0
BYD1_k127_6948162_2 aspartate glutamate uridylate kinase K07144 - 2.7.4.31 0.000000000000000000000000000000000000000000000000003263 188.0
BYD1_k127_6948162_3 Promotes the exchange of GDP for GTP in EF-1-alpha GDP, thus allowing the regeneration of EF-1-alpha GTP that could then be used to form the ternary complex EF-1-alpha GTP AAtRNA K03232 - - 0.00000000000000000000000000000007592 125.0
BYD1_k127_6948162_4 protein conserved in archaea - - - 0.000000000000000000000000000001086 123.0
BYD1_k127_6948162_5 Zn-ribbon RNA-binding protein with a function in translation K07580 - - 0.000000000000000000000000001104 112.0
BYD1_k127_696324_0 Subtilase family K14645 GO:0005575,GO:0005576 - 1.125e-202 644.0
BYD1_k127_6966427_0 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000007488 267.0
BYD1_k127_6966427_1 DNA polymerase activity K02319 - 2.7.7.7 0.0000001623 61.0
BYD1_k127_6970870_0 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002271 337.0
BYD1_k127_6970870_1 Diacylglycerol kinase catalytic domain (presumed) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001103 255.0
BYD1_k127_697772_0 - - - - 0.0000000000000000000000000000000000000000000000000000004205 198.0
BYD1_k127_697772_1 Tetratricopeptide repeat - - - 0.00000000000000000002652 96.0
BYD1_k127_6990269_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 285.0
BYD1_k127_6990269_1 5-formyltetrahydrofolate cycloligase K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000000000000001665 220.0
BYD1_k127_6990269_2 Methyltransferase domain - - - 0.0000000000000002657 79.0
BYD1_k127_7002811_0 Fumarate reductase succinate dehydrogenase flavoprotein K00239 - 1.3.5.1,1.3.5.4 8.423e-243 762.0
BYD1_k127_7002811_1 Fumarase C C-terminus K01679,K01744 - 4.2.1.2,4.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 533.0
BYD1_k127_7002811_2 COG0479 Succinate dehydrogenase fumarate reductase, Fe-S protein subunit K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 292.0
BYD1_k127_7012062_0 transcription termination protein NusA K02600 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0043244,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000002901 242.0
BYD1_k127_7012062_1 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.000000000000000000000000000000009426 129.0
BYD1_k127_7012062_2 Protein of unknown function (DUF357) K09728 - - 0.000000000000001707 79.0
BYD1_k127_7026429_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.00000000129 59.0
BYD1_k127_7026429_1 - - - - 0.00000001552 59.0
BYD1_k127_7026499_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000004548 219.0
BYD1_k127_7026499_1 CHAT domain - - - 0.000000000002489 71.0
BYD1_k127_7028440_0 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000312 144.0
BYD1_k127_7035378_0 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 350.0
BYD1_k127_7039800_0 His Kinase A (phosphoacceptor) domain K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 439.0
BYD1_k127_704684_0 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000002157 215.0
BYD1_k127_7047401_0 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002554 270.0
BYD1_k127_7048528_0 Cell division protein 48 (CDC48), domain 2 K13525 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007703 472.0
BYD1_k127_7050349_0 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000003695 187.0
BYD1_k127_7058377_0 PhoD-like phosphatase K01179 - 3.2.1.4 0.0 1188.0
BYD1_k127_7058377_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 6.1.1.6 1.457e-263 818.0
BYD1_k127_7064511_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3'- to 5'-direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02322 - 2.7.7.7 8.234e-223 696.0
BYD1_k127_7064511_1 TIGRFAM UbiD family - - - 5.79e-214 670.0
BYD1_k127_7064511_2 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 609.0
BYD1_k127_7064511_3 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008641 271.0
BYD1_k127_7064511_4 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.00001929 46.0
BYD1_k127_7068007_0 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000006819 202.0
BYD1_k127_7078606_0 TIGRFAM pyruvate ketoisovalerate oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 297.0
BYD1_k127_7078606_1 TIGRFAM pyruvate ferredoxin flavodoxin oxidoreductase, delta subunit K00171 - 1.2.7.1 0.0000000000000000000000000000000000000000004156 158.0
BYD1_k127_7078606_2 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169 - 1.2.7.1 0.0000000000000000000000000000000000003365 140.0
BYD1_k127_7088796_0 PFAM Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0 1119.0
BYD1_k127_7088796_1 Uncharacterized protein conserved in archaea (DUF2098) - - - 0.000000000002035 70.0
BYD1_k127_7101018_0 COG0436 Aspartate tyrosine aromatic aminotransferase K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 434.0
BYD1_k127_7101018_1 Transcriptional regulator, TrmB - - - 0.000000000000000000000000000000000000000000000001227 177.0
BYD1_k127_7105213_0 TPR Domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006393 286.0
BYD1_k127_7105213_1 Alkyl sulfatase dimerisation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001546 268.0
BYD1_k127_7128090_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.000000000000000000000000000006208 134.0
BYD1_k127_7128090_1 Mannose-6-phosphate isomerase K01485 - 3.5.4.1 0.00004975 54.0
BYD1_k127_7130218_0 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 3.266e-273 849.0
BYD1_k127_7130218_1 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006954 354.0
BYD1_k127_7130853_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 361.0
BYD1_k127_7130853_1 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000004119 175.0
BYD1_k127_7130853_2 PFAM tRNA synthetase, class II (G, H, P and S) K01880 - 6.1.1.14 0.0000000000000000000000000000000000000000000001399 171.0
BYD1_k127_713564_0 Methanogenesis marker 13 metalloprotein K21611 - 6.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 549.0
BYD1_k127_713564_1 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl-coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of Ni- sirohydrochlorin, using L-glutamine or ammonia as the nitrogen source K22012 - 6.3.5.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 537.0
BYD1_k127_713564_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 527.0
BYD1_k127_713564_3 PFAM Mur ligase, middle domain protein K21612 - 6.4.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009434 347.0
BYD1_k127_713564_4 Catalyzes the insertion of Co(2 ) into sirohydrochlorin as part of the anaerobic pathway to cobalamin biosynthesis. Involved in the biosynthesis of the unique nickel-containing tetrapyrrole coenzyme F430, the prosthetic group of methyl- coenzyme M reductase (MCR), which plays a key role in methanogenesis and anaerobic methane oxidation. Catalyzes the insertion of Ni(2 ) into sirohydrochlorin to yield Ni- sirohydrochlorin K22011 - 4.99.1.11,4.99.1.3 0.0000000000000000000000000000000000000000000000000000000000002085 214.0
BYD1_k127_713827_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K11527 - 2.7.13.3 0.0000000000000000000000000000000000000001565 167.0
BYD1_k127_713827_1 GGDEF domain - - - 0.0000000000000000000000001366 121.0
BYD1_k127_7140480_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.00000000000000000000000000000000000000000000002004 174.0
BYD1_k127_7140480_1 - - - - 0.0007838 48.0
BYD1_k127_7140488_0 PFAM CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 506.0
BYD1_k127_7140488_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000009043 227.0
BYD1_k127_7140488_2 Belongs to the UPF0280 family K09740 - - 0.000000000000000000000000000000003705 131.0
BYD1_k127_7143330_0 CARDB - - - 0.000000000000000000000000000000000000000000000000000000000000000000001546 245.0
BYD1_k127_7143330_1 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000004311 241.0
BYD1_k127_7143330_2 8-oxoguanine DNA glycosylase domain protein K03660 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000001543 233.0
BYD1_k127_7166252_0 Putative heavy-metal chelation K09138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004568 366.0
BYD1_k127_7171503_0 PFAM Aminotransferase class I and II K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006751 451.0
BYD1_k127_7171503_1 Broad-specificity nucleoside monophosphate (NMP) kinase that catalyzes the reversible transfer of the terminal phosphate group between nucleoside triphosphates and monophosphates K18532 - 2.7.4.3 0.00000000000000000000000000000000003231 137.0
BYD1_k127_7188872_0 peptidase S8 and S53, subtilisin, kexin, sedolisin K06877 - - 0.00000000000000000000000000000000000000000000000000000000000000000003778 240.0
BYD1_k127_7188872_1 domain protein - - - 0.0000000000000000002286 94.0
BYD1_k127_7193107_0 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1292.0
BYD1_k127_7193107_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 282.0
BYD1_k127_7193107_2 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000000000000000007294 215.0
BYD1_k127_7193107_3 COG3634 Alkyl hydroperoxide reductase, large subunit - - - 0.00000000000000000000000000007631 118.0
BYD1_k127_719400_0 Uncharacterized protein conserved in archaea (DUF2114) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 338.0
BYD1_k127_723128_0 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 460.0
BYD1_k127_723128_1 PFAM ABC transporter related K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 397.0
BYD1_k127_723128_2 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000003785 142.0
BYD1_k127_7232972_0 Catalyzes the radical-mediated transfer of the hydroxybenzyl group from 4-hydroxyphenylpyruvate (HPP) to 5-amino- 6-ribitylamino-2,4(1H,3H)-pyrimidinedione to form 7,8-didemethyl- 8-hydroxy-5-deazariboflavin (FO) K11780 - 2.5.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 411.0
BYD1_k127_7232972_1 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.00000000000000000000000000000000000000000000000000000000000000000000000006315 255.0
BYD1_k127_7232972_2 NADP oxidoreductase, coenzyme F420-dependent K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000929 222.0
BYD1_k127_7232972_3 DNA-binding protein with PD1-like DNA-binding motif K06934 - - 0.0000000000000000000000000000000000001229 147.0
BYD1_k127_7232972_4 Belongs to the peptidase M48B family K03799 - - 0.0003133 43.0
BYD1_k127_7251520_0 TIGRFAM small GTP-binding protein K06943 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 474.0
BYD1_k127_7251520_1 SMART Peptidase A22, presenilin signal peptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000002738 233.0
BYD1_k127_7257791_0 Belongs to the HMG-CoA reductase family K00021 - 1.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000007279 229.0
BYD1_k127_7257791_1 - - - - 0.000000000000000000000000000000002437 141.0
BYD1_k127_7257791_2 Peptidase family M13 K07386 - - 0.0000000000000000000000000000003668 129.0
BYD1_k127_7258368_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 344.0
BYD1_k127_7258368_1 Aerotolerance regulator N-terminal K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000001039 235.0
BYD1_k127_7259078_0 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04801 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 398.0
BYD1_k127_7259078_1 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 317.0
BYD1_k127_7259078_2 tetratricopeptide repeat - - - 0.000008278 59.0
BYD1_k127_7278631_0 PFAM chemotaxis sensory transducer K03406,K05874 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001373 508.0
BYD1_k127_7278631_1 SMART PAS domain containing protein K03406 - - 0.0000000004044 73.0
BYD1_k127_7283091_0 Tetratricopeptide repeat - - - 1.405e-195 625.0
BYD1_k127_7283091_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K07558 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 436.0
BYD1_k127_7283091_2 Clostripain family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 318.0
BYD1_k127_7283091_3 COG1940 Transcriptional regulator sugar kinase K00845 - 2.7.1.2 0.000000000000000000000000000000000000000000000000000001671 196.0
BYD1_k127_7285014_0 Protein of unknown function (DUF460) K09150 - - 1.706e-259 814.0
BYD1_k127_7285014_1 Domain of unknown function DUF128 K21640 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003826 406.0
BYD1_k127_7285014_2 Rio2, N-terminal K07179 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009481 390.0
BYD1_k127_7285014_3 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 349.0
BYD1_k127_7285014_4 PFAM Glucose-6-phosphate isomerase K06859 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001003 301.0
BYD1_k127_7285014_5 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source K01916 - 6.3.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 295.0
BYD1_k127_7285014_6 PFAM PP-loop domain protein - - - 0.00000000000000000000000007941 115.0
BYD1_k127_7285014_7 TPR repeat-containing protein - - - 0.0000000000000004074 86.0
BYD1_k127_7285014_8 - - - - 0.000002998 49.0
BYD1_k127_7285504_0 Uncharacterized membrane protein (DUF2298) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 586.0
BYD1_k127_7285504_1 PFAM conserved K07027 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 419.0
BYD1_k127_7285504_2 PFAM Glycosyl transferase family 2 K07027 - - 0.00000000000000000000000000000000000000000000000000002564 190.0
BYD1_k127_7286590_0 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002111 382.0
BYD1_k127_7286590_1 PFAM Semialdehyde dehydrogenase NAD - binding K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 355.0
BYD1_k127_7286590_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.00000000000000000000000003263 108.0
BYD1_k127_7295069_0 Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L-cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)) K06868 - 2.5.1.73 2.69e-233 728.0
BYD1_k127_7295069_1 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 3.135e-196 617.0
BYD1_k127_7295069_2 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005852 354.0
BYD1_k127_7295069_3 FeS cluster assembly scaffold protein NifU K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005318 265.0
BYD1_k127_7295069_4 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.0000000001119 62.0
BYD1_k127_7302903_0 Threonine dehydratase K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 406.0
BYD1_k127_7302903_1 Pas domain K00974,K02485 - 2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000001518 257.0
BYD1_k127_7310694_0 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000004881 166.0
BYD1_k127_7310694_1 Putative heavy-metal chelation - - - 0.00000000000000000000000000000000000004944 149.0
BYD1_k127_7310875_0 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000000006059 216.0
BYD1_k127_7310875_1 PFAM Aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000005335 185.0
BYD1_k127_7310875_2 Acetyltransferase (GNAT) domain - - - 0.00000000005044 64.0
BYD1_k127_7319516_0 PHP-associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007138 398.0
BYD1_k127_7319516_1 PFAM GPR1 FUN34 yaaH family K07034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001234 256.0
BYD1_k127_7343908_0 Pas domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000388 154.0
BYD1_k127_7343908_1 Hemerythrin HHE cation binding domain - - - 0.000000003445 69.0
BYD1_k127_7348629_0 PFAM peptidase zinc-dependent K06974 - - 0.000000000000000000000000000000000000000000000000000000000000009672 221.0
BYD1_k127_7348629_1 Belongs to the UPF0146 family K09713 - - 0.00000000000000000000000000000000007597 137.0
BYD1_k127_7354427_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1238.0
BYD1_k127_7357893_0 Sodium hydrogen exchanger K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001987 265.0
BYD1_k127_7357893_1 MscS Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000007221 226.0
BYD1_k127_7388238_0 PFAM PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009016 282.0
BYD1_k127_7388238_1 PFAM PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000009368 177.0
BYD1_k127_7389069_0 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step K00577 - 2.1.1.86 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 445.0
BYD1_k127_7389069_1 PFAM Tetrahydromethanopterin S-methyltransferase MtrH subunit K00584 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 333.0
BYD1_k127_7389069_2 Part of a complex that catalyzes the formation of methyl-coenzyme M and tetrahydromethanopterin from coenzyme M and methyl-tetrahydromethanopterin. This is an energy-conserving, sodium-ion translocating step K00577 - 2.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000003886 242.0
BYD1_k127_7389069_3 TIGRFAM tetrahydromethanopterin S-methyltransferase, F subunit K00582 - 2.1.1.86 0.0000000000000001509 80.0
BYD1_k127_7412612_0 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 441.0
BYD1_k127_7414009_0 PFAM peptidase S8 and S53 subtilisin kexin sedolisin K08651 - 3.4.21.66 0.00003064 52.0
BYD1_k127_7421421_0 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000005439 228.0
BYD1_k127_7421421_1 IMP dehydrogenase activity - - - 0.0000000000000000000000001432 115.0
BYD1_k127_7421421_2 Periplasmic or secreted lipoprotein - - - 0.00006125 48.0
BYD1_k127_7422213_0 ATP-binding region, ATPase domain protein K03407 - 2.7.13.3 1.111e-318 982.0
BYD1_k127_7422213_1 CheC inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 354.0
BYD1_k127_7422213_2 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000003305 264.0
BYD1_k127_7422416_0 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000786 566.0
BYD1_k127_7422416_1 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 300.0
BYD1_k127_7425978_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 3.359e-282 879.0
BYD1_k127_7425978_1 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000000000000000162 193.0
BYD1_k127_7425978_2 Domain of unknown function (DUF3821) - - - 0.0000000000000000000000000000533 119.0
BYD1_k127_7429331_0 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000009144 222.0
BYD1_k127_7429331_1 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000009522 185.0
BYD1_k127_7429331_2 RNA recognition motif - - - 0.000000000000000000000000000000000000005061 149.0
BYD1_k127_7429331_3 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000005654 138.0
BYD1_k127_7445683_0 Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( ) K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 348.0
BYD1_k127_7448799_0 PFAM DNA polymerase beta domain protein region K07075 - - 0.00000000000000000234 87.0
BYD1_k127_7448799_1 Metallo-beta-lactamase superfamily K02238 - - 0.000000000001847 69.0
BYD1_k127_7448799_2 nuclease of the RecB family - - - 0.00000065 51.0
BYD1_k127_7452083_0 Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase K01601 - 4.1.1.39 2.015e-217 679.0
BYD1_k127_7452083_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 417.0
BYD1_k127_7452083_2 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001655 396.0
BYD1_k127_7452083_3 parallel beta-helix repeat - - - 0.000000000000000000000000000000000003977 143.0
BYD1_k127_7452083_4 Belongs to the eIF-2B alpha beta delta subunits family K18237 - 5.3.1.29 0.00000000000000000000000002303 109.0
BYD1_k127_7454355_0 Amino acid permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 509.0
BYD1_k127_7454355_1 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000002145 259.0
BYD1_k127_7465106_0 PFAM Phosphomethylpyrimidine kinase type-1 K00941,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 290.0
BYD1_k127_7465106_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000004824 220.0
BYD1_k127_7466633_0 DJ-1/PfpI family - - - 0.00000000000000000000000000000000000000000000000000000000000000001883 228.0
BYD1_k127_7466633_1 Tellurite resistance protein TehB - - - 0.00000000000000000000000000000000000000000000000008989 181.0
BYD1_k127_7479733_0 Predicted membrane protein (DUF2079) K07778 - 2.7.13.3 0.0000000000000000000000000000007001 135.0
BYD1_k127_7481947_0 Belongs to the UPF0305 family K07012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002923 293.0
BYD1_k127_7481947_1 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002453 271.0
BYD1_k127_7486170_0 PFAM NADH Ubiquinone plastoquinone (complex I) K14086 - - 1.588e-223 709.0
BYD1_k127_7486170_1 PFAM NADH-ubiquinone oxidoreductase, chain 49kDa K14090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002706 556.0
BYD1_k127_7486170_10 4Fe-4S dicluster domain - - - 0.00000000000000000000007035 98.0
BYD1_k127_7486170_2 CoB--CoM heterodisulfide reductase subunit B - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001405 483.0
BYD1_k127_7486170_3 PFAM respiratory-chain NADH dehydrogenase, subunit 1 K14087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004797 347.0
BYD1_k127_7486170_4 PFAM NADH ubiquinone oxidoreductase, 20 K14088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001387 267.0
BYD1_k127_7486170_5 heterodisulfide reductase subunit C K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000001572 149.0
BYD1_k127_7486170_6 4Fe-4S dicluster domain K14091 - - 0.0000000000000000000000000000000000003522 144.0
BYD1_k127_7486170_7 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000032 135.0
BYD1_k127_7486170_8 - - - - 0.000000000000000000000000000000003705 131.0
BYD1_k127_7486170_9 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K14089 - - 0.000000000000000000000000002864 115.0
BYD1_k127_7487934_0 Kef-type potassium proton antiporter, CPA2 family K03455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 591.0
BYD1_k127_7487934_1 protein histidine kinase activity K02482,K14986 - 2.7.13.3 0.000000000000000000000000000000000000002638 156.0
BYD1_k127_7487934_2 - - - - 0.000000000000000000000000000001986 124.0
BYD1_k127_7492821_0 iron dependent repressor K03709,K04758 - - 0.00000000000000000000000000000000000000001156 161.0
BYD1_k127_7492821_1 Ferrous iron transport B domain protein K04759 - - 0.00000000000000000000000000006933 116.0
BYD1_k127_7492821_2 Pyruvate kinase, barrel domain K00873 - 2.7.1.40 0.000000000000000000000008699 106.0
BYD1_k127_7501701_0 PFAM Radical SAM domain protein K04070 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000002857 257.0
BYD1_k127_7501701_1 PFAM extracellular solute-binding protein family 3 K02030 - - 0.0000000000000000000000000000000000000000000001208 172.0
BYD1_k127_7508106_0 TIGRFAM PAS sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001131 447.0
BYD1_k127_7508106_1 histidine kinase A domain protein - - - 0.00000000000213 81.0
BYD1_k127_7508106_2 PAS domain containing protein K07315,K07675 - 2.7.13.3,3.1.3.3 0.00000001111 69.0
BYD1_k127_7513705_0 COG0737 5'-nucleotidase 2',3'-cyclic phosphodiesterase and related esterases K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 467.0
BYD1_k127_7513705_1 ABC-type transport system, periplasmic component surface lipoprotein K02056,K02323,K07335 - 2.7.7.7,3.6.3.17 0.000000000000000000000000000000000000000000000000000002513 203.0
BYD1_k127_7513705_2 - - - - 0.000006464 51.0
BYD1_k127_751423_0 toxin activity - - - 0.00000000000000000000000000001169 126.0
BYD1_k127_7518937_0 phosphate ABC transporter, inner membrane subunit PstA K02037,K02038 - - 5.258e-310 960.0
BYD1_k127_7518937_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 430.0
BYD1_k127_7518937_2 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001393 268.0
BYD1_k127_7518937_3 Phosphate uptake regulator, PhoU - - - 0.00000000000000000000000000000007639 127.0
BYD1_k127_7521551_0 Uncharacterized ACR, COG1993 K09137 - - 0.0000000000000000000000000000000000000000000000000007566 186.0
BYD1_k127_7521551_1 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.000000000000000000000000000000000000000000000000004369 184.0
BYD1_k127_7521551_2 ATP-binding region, ATPase domain protein domain protein - - - 0.0000000000000000000004083 96.0
BYD1_k127_7521551_3 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000001201 98.0
BYD1_k127_7522897_0 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000000000000000000000000008332 226.0
BYD1_k127_7522897_1 PFAM regulatory protein TetR K03577,K18939 - - 0.000000000000000000000000000000000000000000000004503 179.0
BYD1_k127_7522897_2 FHA domain K12132 - 2.7.11.1 0.0000000000000000000000000000001697 124.0
BYD1_k127_7522897_5 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0002964 44.0
BYD1_k127_7532751_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0 1095.0
BYD1_k127_7550926_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000006092 165.0
BYD1_k127_7550926_1 Carboxymuconolactone decarboxylase family - - - 0.00000000000000000000000000000009551 126.0
BYD1_k127_7550926_2 RNA recognition motif - - - 0.00000000000000000000000004656 113.0
BYD1_k127_7550926_3 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000000000006731 102.0
BYD1_k127_7554247_0 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 380.0
BYD1_k127_7554247_1 - - - - 0.000000000000000000000000000000000000000004279 158.0
BYD1_k127_7554247_2 Hydrogenase maturation protease K08315 - 3.4.23.51 0.000000000000000000000000000000000000165 146.0
BYD1_k127_7554247_3 Protein phosphatase 2C - - - 0.0000000000000000000000000115 117.0
BYD1_k127_7554247_4 DEAD DEAH box helicase K06877 - - 0.000000000000000000000001768 104.0
BYD1_k127_7572322_0 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 377.0
BYD1_k127_7572322_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000001141 243.0
BYD1_k127_7572322_2 response regulator, receiver K07668,K07669 - - 0.000000000000000000000000000000000000000000000000000000000000003207 220.0
BYD1_k127_7572322_4 - - - - 0.000000000000000000000000000000000000000000000000000001202 207.0
BYD1_k127_7572322_5 His Kinase A (phosphoacceptor) domain K02030 - - 0.000000000000000000000000000000000000000000000000000202 205.0
BYD1_k127_7572322_6 response regulator, receiver K03413 - - 0.00000000000000000000000000000000000000000002763 166.0
BYD1_k127_7572322_7 diguanylate cyclase - - - 0.000000001932 70.0
BYD1_k127_758828_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 376.0
BYD1_k127_758828_1 PFAM Major Facilitator Superfamily - - - 0.0000000000000000000002319 97.0
BYD1_k127_7595146_0 PFAM DEAD_2 domain protein K10844 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000002377 246.0
BYD1_k127_7595146_1 PFAM Methylated-DNA- protein -cysteine S-methyltransferase K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000007242 173.0
BYD1_k127_7595146_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000401 149.0
BYD1_k127_7602498_0 Formylmethanofuran dehydrogenase, subunit B K00201 - 1.2.7.12 9.906e-283 869.0
BYD1_k127_7602498_1 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 520.0
BYD1_k127_7602498_2 PFAM molydopterin dinucleotide-binding region K00203 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000000000000000001706 248.0
BYD1_k127_7604042_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005324 265.0
BYD1_k127_7606536_0 Protein of unknown function (DUF4013) - - - 0.00000000000000000000000000000000000000000000000000000000007554 213.0
BYD1_k127_7606536_1 Transcriptional regulator padr-like family K10947 - - 0.0000000000000000000000000000000000000001313 153.0
BYD1_k127_7606536_2 Protein of unknown function (DUF1700) - - - 0.0000000000000000000000000000001096 127.0
BYD1_k127_762668_0 PFAM ribonuclease II K01147 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 376.0
BYD1_k127_7637162_0 PFAM Methyltransferase type - - - 0.0000000000000000000000000000000000000000000000000000000000001004 221.0
BYD1_k127_7637162_1 ABC transporter substrate-binding protein K02020 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0030973,GO:0031975,GO:0042597,GO:0043167,GO:0043168,GO:0044464 - 0.00000000000001079 78.0
BYD1_k127_7637523_0 AAA domain, putative AbiEii toxin, Type IV TA system K16786,K16787 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 413.0
BYD1_k127_7637523_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004828 316.0
BYD1_k127_7637523_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 306.0
BYD1_k127_7637523_3 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 280.0
BYD1_k127_7637523_4 PFAM Cobalt transport protein K16785 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009942 285.0
BYD1_k127_7637523_5 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007781 244.0
BYD1_k127_7637523_6 Binds to the 23S rRNA K02896 - - 0.000000000000000000000000000001308 121.0
BYD1_k127_7637523_7 Belongs to the eukaryotic ribosomal protein eS28 family K02979 - - 0.0000000000000000000008511 94.0
BYD1_k127_7662353_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 327.0
BYD1_k127_7662353_1 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000003375 237.0
BYD1_k127_7669567_0 PAS domain K00974,K02485 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000338 220.0
BYD1_k127_7691840_0 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 350.0
BYD1_k127_7693525_0 Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair K02683 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 505.0
BYD1_k127_7693525_1 TIGRFAM histone acetyltransferase, ELP3 family K07739 - 2.3.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002145 274.0
BYD1_k127_7699730_0 TIGRFAM ATP-dependent DNA helicase, RecQ K03654 - 3.6.4.12 1.37e-283 882.0
BYD1_k127_7699730_1 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002097 260.0
BYD1_k127_7699730_2 - - - - 0.00000000000000000000000000000000000000001218 159.0
BYD1_k127_7699730_3 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000002117 61.0
BYD1_k127_7699730_4 - - - - 0.00000006491 61.0
BYD1_k127_7704966_0 Archaeal Type IV pilin, N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004222 423.0
BYD1_k127_7704966_1 Sporulation protein YtfJ (Spore_YtfJ) - - - 0.000000000000000000000000000000003556 133.0
BYD1_k127_7704966_2 Protein of unknown function (DUF2953) - - - 0.000000000000006561 83.0
BYD1_k127_7711838_0 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005446 558.0
BYD1_k127_7711838_1 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000001262 141.0
BYD1_k127_7711838_2 Sugar efflux transporter for intercellular exchange K15383 - - 0.0000000000000000000000993 101.0
BYD1_k127_7721687_0 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.00000000000000000000000000000006375 127.0
BYD1_k127_7721687_1 PAS fold - - - 0.00000000000000000049 95.0
BYD1_k127_7728572_0 PFAM molydopterin dinucleotide-binding region K00203 - 1.2.7.12 0.0000000000000000000000001585 107.0
BYD1_k127_7728572_1 Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule - - - 0.000000000000000004437 84.0
BYD1_k127_7730340_0 PAS domain K00974,K02485 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000009074 234.0
BYD1_k127_7730340_1 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000001202 161.0
BYD1_k127_7731101_0 Component of the F(420)H(2) dehydrogenase (FPO complex) which is part of the energy-conserving F(420)H(2) heterodisulfide oxidoreductase system. The membrane-bound electron transfer system of the complex plays an important role in the metabolism of methylotrophic methanogens when the organisms grow on methanol or methylamines. Catalyzes the oxidation of methanophenazine to dihydromethanophenazine. It shuttles electrons from F(420)H(2), via FAD and iron-sulfur (Fe-S) centers, to methanophenazine (an electron carrier in the membrane). It couples the redox reaction to proton translocation (for every two electrons transferred, two hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00337,K22163 - 1.5.98.3,1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009746 394.0
BYD1_k127_7731101_1 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) K00123,K00390,K00441,K03388,K14121,K22174 - 1.1.98.4,1.12.98.1,1.17.1.9,1.8.4.10,1.8.4.8,1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.00000000000000000000003762 102.0
BYD1_k127_7746634_0 CoB--CoM heterodisulfide reductase subunit B K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 587.0
BYD1_k127_7746634_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00205 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 539.0
BYD1_k127_7746634_2 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003298 514.0
BYD1_k127_7746634_3 heterodisulfide reductase subunit C K03390 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 361.0
BYD1_k127_7754053_0 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 490.0
BYD1_k127_7754053_1 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 354.0
BYD1_k127_7760623_0 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 293.0
BYD1_k127_7760623_1 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000004151 173.0
BYD1_k127_7760623_2 General factor that plays a role in the activation of archaeal genes transcribed by RNA polymerase. Binds specifically to the TATA box promoter element which lies close to the position of transcription initiation K03120 - - 0.00000000000000000000000000000003872 125.0
BYD1_k127_7764748_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 364.0
BYD1_k127_7764748_1 metallopeptidase activity - - - 0.000000000000007035 87.0
BYD1_k127_777529_0 SMART PAS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006034 261.0
BYD1_k127_777529_1 - - - - 0.000000000000000000000000008218 117.0
BYD1_k127_7779668_0 Domain of unknown function (DUF5122) beta-propeller - - - 0.0000000008333 64.0
BYD1_k127_7786363_0 transferase hexapeptide repeat containing protein K00966 - 2.7.7.13 1.088e-224 700.0
BYD1_k127_7786363_1 PFAM CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 455.0
BYD1_k127_7786363_2 TGS domain protein K06942 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 314.0
BYD1_k127_7786363_3 - - - - 0.0000000000000000000000000000000000000000000000000003071 188.0
BYD1_k127_7786363_4 - - - - 0.00000000000000000000000000000000000000000000000001834 180.0
BYD1_k127_7790935_0 Histidine kinase-like ATPases K20971,K20974 - 2.7.13.3 7.463e-200 649.0
BYD1_k127_7790935_1 Methyltransferase, chemotaxis proteins K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000002181 216.0
BYD1_k127_7796919_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000006692 241.0
BYD1_k127_7806315_0 Predicted membrane protein (DUF2070) K08979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 516.0
BYD1_k127_7806315_1 Belongs to the carbohydrate kinase PfkB family K00852,K22026 - 2.7.1.15,2.7.1.213,2.7.1.73 0.0000000000000000000000000000000000002366 143.0
BYD1_k127_7823_0 COG0863 DNA modification methylase K00571,K00590 - 2.1.1.113,2.1.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 522.0
BYD1_k127_7823_1 Histidine kinase-like ATPases K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000002269 138.0
BYD1_k127_7823_2 PFAM TPR repeat-containing protein - - - 0.0000000000000000006318 90.0
BYD1_k127_7823582_0 Proton-conducting membrane transporter K05568 - - 5.111e-258 801.0
BYD1_k127_7823582_1 - - - - 0.00000000019 62.0
BYD1_k127_7824528_0 PFAM triphosphoribosyl-dephospho-CoA protein K05966 - 2.4.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 344.0
BYD1_k127_7824528_1 Dihydrouridine synthase (Dus) - - - 0.00000000000000000000000000000000000001059 146.0
BYD1_k127_7824528_2 Protein of unknown function (DUF447) K09154 - - 0.00000000000000000000000008748 112.0
BYD1_k127_7827765_0 PFAM glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 605.0
BYD1_k127_7827765_1 Phosphohydrolase K09163 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006084 302.0
BYD1_k127_7897345_0 Part of the Rad50 Mre11 complex, which is involved in the early steps of DNA double-strand break (DSB) repair. The complex may facilitate opening of the processed DNA ends to aid in the recruitment of HerA and NurA. Mre11 binds to DSB ends and has both double-stranded 3'-5' exonuclease activity and single- stranded endonuclease activity K03547 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007991 415.0
BYD1_k127_7897345_1 ATPase involved in DNA repair K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001283 343.0
BYD1_k127_7902503_0 TIGRFAM acetolactate synthase, large subunit, biosynthetic type K01652 - 2.2.1.6 2.59e-225 711.0
BYD1_k127_7902503_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03406 - - 0.00000000000000000235 85.0
BYD1_k127_7902503_2 - - - - 0.00007821 51.0
BYD1_k127_7912870_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000009016 266.0
BYD1_k127_7912870_1 Protein of unknown function (DUF3795) - - - 0.00000000000000000000000000000289 124.0
BYD1_k127_7917940_0 PFAM bifunctional deaminase-reductase domain protein K14654 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006139,GO:0006725,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016614,GO:0016616,GO:0017144,GO:0018130,GO:0034641,GO:0036094,GO:0042364,GO:0042726,GO:0042727,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046983,GO:0048037,GO:0050661,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.1.1.302 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007532 319.0
BYD1_k127_7917940_1 Could be responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000008424 228.0
BYD1_k127_7924709_0 PFAM ADP-ribosylation Crystallin J1 - - - 0.0000000000000000000000000000000000000000000000818 175.0
BYD1_k127_7924709_1 Domain of unknown function (DUF1848) - - - 0.00000000000000000108 89.0
BYD1_k127_7924709_2 zinc finger K03168 - 5.99.1.2 0.000000000000000001707 87.0
BYD1_k127_7944206_0 Bacterial extracellular solute-binding protein - - - 0.00000000000000000000000000000001372 141.0
BYD1_k127_7961790_0 Bacterial Ig-like domain 2 - - - 0.000000000000000000000000000000000000000000000000000002323 202.0
BYD1_k127_7961790_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000001735 166.0
BYD1_k127_7976058_0 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 394.0
BYD1_k127_7976058_1 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000116 129.0
BYD1_k127_7982115_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000008526 145.0
BYD1_k127_7982115_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000001057 97.0
BYD1_k127_7985020_0 Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine K00641 - 2.3.1.31 1.219e-232 728.0
BYD1_k127_7985020_1 PFAM Cys Met metabolism K01740 - 2.5.1.49 1.147e-227 707.0
BYD1_k127_7985020_2 Metallo-beta-lactamase superfamily K02238 - - 0.00000000000000000000000000000000000000000000000000000000000000000007715 241.0
BYD1_k127_7985020_3 Protein of unknown function (DUF3006) - - - 0.00001745 50.0
BYD1_k127_7985177_0 calcium- and calmodulin-responsive adenylate cyclase activity K01186 - 3.2.1.18 0.000000000000000000000000000000000000000000000000000000000000001385 236.0
BYD1_k127_7985177_1 Papain family cysteine protease - - - 0.000000000000000000000000000002334 126.0
BYD1_k127_7985177_2 PFAM PKD domain containing protein - - - 0.0000000000001217 83.0
BYD1_k127_8019079_0 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 449.0
BYD1_k127_8019079_1 PFAM transport system permease protein K02015 - - 0.00000000000000000000000000000000000000000000000000000000000000000004466 234.0
BYD1_k127_802452_1 metallophosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003241 270.0
BYD1_k127_8032522_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 369.0
BYD1_k127_8032522_1 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009854 274.0
BYD1_k127_8045173_0 PFAM Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 349.0
BYD1_k127_8045173_1 TIGRFAM anaerobic ribonucleoside-triphosphate reductase activating protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000004439 248.0
BYD1_k127_8045173_2 adenyl ribonucleotide binding - - - 0.000000000000000000000000000000000000000000000000000000000001606 216.0
BYD1_k127_8045173_3 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000004441 119.0
BYD1_k127_8062964_0 PFAM class II aldolase adducin family protein K01628 - 4.1.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001924 291.0
BYD1_k127_8062964_1 PFAM NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000331 287.0
BYD1_k127_8062964_2 COG0467 RecA-superfamily ATPases implicated in signal transduction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001788 271.0
BYD1_k127_8062964_3 - - - - 0.000000000005943 71.0
BYD1_k127_8062964_4 PFAM Thioredoxin K03671 - - 0.000000001147 59.0
BYD1_k127_8069467_0 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 434.0
BYD1_k127_8069467_1 hydrophobe amphiphile efflux-3 (HAE3) family K07003 - - 0.000000000000000003681 85.0
BYD1_k127_8069467_2 PFAM Rubredoxin-type Fe(Cys)4 protein - - - 0.00000000000008699 72.0
BYD1_k127_8069467_3 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.000000000003047 70.0
BYD1_k127_8069467_4 TIGRFAM PAS sensor protein - - - 0.00000000001125 66.0
BYD1_k127_8084316_0 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids K15888 - 2.5.1.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007642 409.0
BYD1_k127_8084316_1 COG0467 RecA-superfamily ATPases implicated in signal transduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 359.0
BYD1_k127_8084316_2 S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF- 2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis K20215 - 2.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006439 343.0
BYD1_k127_8084316_3 PFAM Di-trans-poly-cis-decaprenylcistransferase K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000957 254.0
BYD1_k127_8084316_4 PFAM Radical SAM domain protein K07129 - - 0.0000000000000004259 78.0
BYD1_k127_8084316_5 protein conserved in archaea K09728,K14656,K20215 - 2.1.1.98,2.7.7.2 0.00000001208 60.0
BYD1_k127_8086271_0 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000522 214.0
BYD1_k127_8086271_1 Transport of potassium into the cell K03549 - - 0.0000000000000000000000000000000000000000000000000003788 189.0
BYD1_k127_8093016_0 Exchanges the guanine residue with 7-cyano-7- deazaguanine (preQ0) at position 15 in the dihydrouridine loop (D- loop) of archaeal tRNAs K18779 - 2.4.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 481.0
BYD1_k127_8093016_1 PFAM AMMECR1 domain protein K09141 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004142 287.0
BYD1_k127_8096805_0 PFAM dihydropteroate synthase, DHPS - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 519.0
BYD1_k127_8096805_1 nucleoside 2-deoxyribosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 315.0
BYD1_k127_8096805_2 pre-rRNA processing protein involved in ribosome biogenesis K09140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003 275.0
BYD1_k127_8096805_3 Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme K14656 - 2.7.7.2 0.0000000000000000000000000000000000000000000000000000001006 198.0
BYD1_k127_8096805_4 Prokaryotic homologs of the JAB domain - - - 0.0000000000000000000000000000000000000000007682 159.0
BYD1_k127_8096805_5 membrane-bound metal-dependent hydrolase - - - 0.000000000000000000000000000005164 126.0
BYD1_k127_8100444_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 331.0
BYD1_k127_8100444_1 PFAM Indole-3-glycerol phosphate synthase K01609 - 4.1.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001468 276.0
BYD1_k127_8100444_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.00000000000000000000000000000000000000000000000004759 181.0
BYD1_k127_8100444_3 Belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000000000000000000000000000001171 184.0
BYD1_k127_8102581_0 Membrane protein of unknown function DUF63 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007312 397.0
BYD1_k127_8102581_1 Catalyzes the NAD(P)H-dependent reduction of dihydroxyacetonephosphate (DHAP or glycerone phosphate) to glycerol 1-phosphate (G1P). The G1P thus generated is used as the glycerophosphate backbone of phospholipids in the cellular membranes of Archaea K00096 - 1.1.1.261 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003966 363.0
BYD1_k127_8102581_2 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) K01881 - 6.1.1.15 0.00000000000000000000000000000000000000000000000000000000000000003251 223.0
BYD1_k127_8102581_3 Stage II sporulation protein M K06384 - - 0.00000000000000000000000000000000000000000000000000000000353 206.0
BYD1_k127_8105854_0 CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000089 269.0
BYD1_k127_8105854_1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000000000002044 211.0
BYD1_k127_8109876_0 permease K03299 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008425 463.0
BYD1_k127_8109876_1 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis K04479 - 2.7.7.7 0.000000000000000001232 89.0
BYD1_k127_8125908_0 Histidine kinase - - - 8.425e-249 789.0
BYD1_k127_8125908_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 2.863e-223 695.0
BYD1_k127_8125908_2 Pas domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 501.0
BYD1_k127_8125908_3 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003933 400.0
BYD1_k127_8126216_0 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000019 223.0
BYD1_k127_8137597_0 Enoyl-(Acyl carrier protein) reductase K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 364.0
BYD1_k127_8137597_1 RecF/RecN/SMC N terminal domain K03631 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007442 262.0
BYD1_k127_8149445_0 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005291 410.0
BYD1_k127_8153064_0 PQQ-like domain - - - 0.00002876 55.0
BYD1_k127_8153064_1 Glycosyl hydrolase family 26 - - - 0.00006738 54.0
BYD1_k127_8154319_0 Amino acid permease - - - 0.0000000000000000000000009978 108.0
BYD1_k127_8154319_1 Mechanosensitive ion channel - - - 0.0000004634 57.0
BYD1_k127_815543_0 PFAM glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 454.0
BYD1_k127_815543_1 - - - - 0.0001233 46.0
BYD1_k127_8166791_0 PFAM D12 class N6 adenine-specific DNA methyltransferase K06223 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000005787 190.0
BYD1_k127_8166791_1 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.00000000000000000000000000000000000000000000007776 172.0
BYD1_k127_8182003_0 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000004352 192.0
BYD1_k127_8182003_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.000009161 49.0
BYD1_k127_8186789_0 PFAM Aminotransferase class I and II K05825 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005236 453.0
BYD1_k127_8186789_1 - - - - 0.00000000000000000000000000000008613 130.0
BYD1_k127_8190441_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001301 283.0
BYD1_k127_8190441_1 PAS domain - - - 0.00000000000000000000000000000003082 126.0
BYD1_k127_8199079_0 Uncharacterised protein family UPF0066 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 310.0
BYD1_k127_8208312_0 FHA domain K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000335 221.0
BYD1_k127_8208312_1 Serine threonine protein kinase K02035,K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000009629 188.0
BYD1_k127_821366_0 MgtE intracellular N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 372.0
BYD1_k127_8226509_0 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008366 270.0
BYD1_k127_8229040_0 Papain family cysteine protease K11751,K14647 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000001665 256.0
BYD1_k127_8229040_1 transcription factor (CBF NF-Y) - - - 0.000000000000000000000004578 102.0
BYD1_k127_8237893_0 PFAM Thiolase K00626 - 2.3.1.9 5.986e-237 734.0
BYD1_k127_8237893_1 3-Oxoacyl- acyl-carrier-protein (ACP) synthase III C terminal K01641 - 2.3.3.10 3.48e-212 661.0
BYD1_k127_8237893_2 Helix-turn-helix domain protein K07731 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009402 258.0
BYD1_k127_8237893_3 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001682 245.0
BYD1_k127_8237893_4 - - - - 0.00000000000000000000000000000007288 127.0
BYD1_k127_8237893_5 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000002177 80.0
BYD1_k127_8241225_0 plastoquinone (Complex I) K12137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 476.0
BYD1_k127_8241225_1 ATP-binding region, ATPase domain protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006665 373.0
BYD1_k127_8241225_2 PFAM carbonic anhydrase K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 346.0
BYD1_k127_8241225_4 Pas domain - - - 0.00000000000002618 74.0
BYD1_k127_8242138_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 4.619e-262 812.0
BYD1_k127_8248153_0 COG0371 Glycerol dehydrogenase and related enzymes K00005 - 1.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004391 438.0
BYD1_k127_8248153_1 cheY-homologous receiver domain - - - 0.00000000000000000000000000004541 121.0
BYD1_k127_8282916_0 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 312.0
BYD1_k127_8282916_1 PFAM Isochorismatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003882 259.0
BYD1_k127_8282916_2 PFAM Uncharacterised protein family (UPF0153) - - - 0.0000000000000000000000000000000000000000000006791 169.0
BYD1_k127_8282916_3 PFAM response regulator receiver K03413 - - 0.000000000000000000000001032 107.0
BYD1_k127_8283333_0 Predicted metal-binding protein (DUF2284) - - - 0.0000000000000000000000000000000000000000000000000004023 192.0
BYD1_k127_8283333_1 Calcineurin-like phosphoesterase - - - 0.0000000000000000000000000000000000000007998 155.0
BYD1_k127_8283333_2 Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity - - - 0.00000000000000002599 93.0
BYD1_k127_8283568_0 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004203 602.0
BYD1_k127_8283568_1 Catalyzes the reversible reduction of methenyl- H(4)MPT( ) to methylene-H(4)MPT K00319 - 1.5.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006309 411.0
BYD1_k127_8283568_2 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 410.0
BYD1_k127_8283568_3 PFAM sigma-70 region 4 domain protein K09714 - - 0.0000000000000000000000000000000000000000000000000000000000000000003305 230.0
BYD1_k127_8283568_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.000000000000000000000000000000001682 131.0
BYD1_k127_8283568_5 Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome K02892 - - 0.000000000000000000000000006179 111.0
BYD1_k127_8292002_0 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 297.0
BYD1_k127_8292002_1 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000001751 255.0
BYD1_k127_8308175_0 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002828 362.0
BYD1_k127_8308175_1 PFAM DNA polymerase, beta domain protein region K07075 - - 0.0000000000000000000000000000000000000002199 151.0
BYD1_k127_8308175_2 Protein of unknown function DUF86 - - - 0.0000000000000000000000000000000003983 133.0
BYD1_k127_8308175_3 Archaeal Type IV pilin, N-terminal - - - 0.0000006864 51.0
BYD1_k127_831493_0 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 297.0
BYD1_k127_831493_1 PFAM helix-turn-helix HxlR type - - - 0.0000000000000000000000000000000000000000000000000001294 188.0
BYD1_k127_831493_2 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000005506 141.0
BYD1_k127_831493_3 NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000009605 131.0
BYD1_k127_831493_4 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000006982 76.0
BYD1_k127_8321829_0 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 282.0
BYD1_k127_8321829_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.000000000000000000000000000000000000000000000000000000000001433 221.0
BYD1_k127_8339045_0 TIGRFAM AAA family ATPase, CDC48 subfamily K13525 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006545 554.0
BYD1_k127_8339045_1 Belongs to the LarC family K09121 - 4.99.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002781 303.0
BYD1_k127_8343197_0 His Kinase A (phosphoacceptor) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006899 371.0
BYD1_k127_8366178_0 Histidine kinase-like ATPases K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 457.0
BYD1_k127_8378821_0 PFAM Carboxymuconolactone decarboxylase - - - 0.0000000000000000000000000000002315 127.0
BYD1_k127_8378821_1 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.0000000000000009519 82.0
BYD1_k127_838183_0 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000002037 231.0
BYD1_k127_838183_1 SMART ATP-binding region ATPase domain protein - - - 0.000006055 58.0
BYD1_k127_8389623_0 PFAM elongation factor Tu domain 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 451.0
BYD1_k127_8389623_1 Intracellular protease, PfpI family K05520 - 3.5.1.124 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000105 280.0
BYD1_k127_8389623_2 - - - - 0.0000000000000000000000000000000000000000000000001744 186.0
BYD1_k127_8389623_3 SMART Elongator protein 3 MiaB NifB - - - 0.00001359 48.0
BYD1_k127_8413155_0 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014,K00891,K03785 - 1.1.1.25,2.7.1.71,4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 371.0
BYD1_k127_8418408_0 DNA polymerase beta domain protein region K09717 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 360.0
BYD1_k127_8418408_1 PFAM amino acid-binding ACT domain protein K06862 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000014 268.0
BYD1_k127_8418408_2 TIGRFAM Sua5 YciO YrdC YwlC family protein K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000006136 256.0
BYD1_k127_8425813_0 NAD(P)H-binding K01709,K01710,K01784 - 4.2.1.45,4.2.1.46,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006291 357.0
BYD1_k127_8425813_1 dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000008449 204.0
BYD1_k127_8425813_2 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.000000000000000000004713 104.0
BYD1_k127_8425813_3 glycosyl transferase family 2 - - - 0.00000000000000000008506 92.0
BYD1_k127_8432869_0 TIGRFAM phosphate binding protein K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001855 270.0
BYD1_k127_8432869_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000005649 180.0
BYD1_k127_8439985_0 Pas domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 518.0
BYD1_k127_84550_0 Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT K00320 - 1.5.98.2 5.866e-196 612.0
BYD1_k127_84550_1 UDP-glucose:hexose-1-phosphate uridylyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 410.0
BYD1_k127_84550_2 Catalyzes the reversible reduction of methenyl- H(4)MPT( ) to methylene-H(4)MPT K00319 - 1.5.98.1 0.0000000000000000000000000000000000161 135.0
BYD1_k127_8470166_0 Involved in cell shape control K22222 - - 5.267e-194 610.0
BYD1_k127_8470166_1 PFAM amine oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 331.0
BYD1_k127_8470562_0 PFAM Exonuclease RNase T and DNA polymerase III K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000004494 221.0
BYD1_k127_8470562_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000001064 80.0
BYD1_k127_849147_0 Uncharacterised ArCR, COG2043 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 355.0
BYD1_k127_849147_1 Radical SAM domain - - - 0.000000000000000000000000000000000000003839 148.0
BYD1_k127_849147_3 Domain of unknown function (DUF4405) - - - 0.00000000000000000001454 95.0
BYD1_k127_849147_4 Tetratricopeptide repeat - - - 0.0000001228 61.0
BYD1_k127_8491960_0 PFAM Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 359.0
BYD1_k127_8491960_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family - - - 0.0000000000000000000000000000000000001226 150.0
BYD1_k127_8491960_2 PFAM Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000003461 139.0
BYD1_k127_8491960_3 Belongs to the archaeal rpoM eukaryotic RPA12 RPB9 RPC11 RNA polymerase family K03057 - - 0.00000000004749 64.0
BYD1_k127_851011_0 CheC inhibitor of MCP methylation K03410 - - 0.00000000000000000000000000000000000000000000000000000000002783 212.0
BYD1_k127_851011_1 ATP-binding region, ATPase domain protein domain protein - - - 0.00000000000000000000000000000000003538 138.0
BYD1_k127_851011_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000009717 77.0
BYD1_k127_8519009_0 Catalyzes the condensation of formaldehyde with tetrahydromethanopterin (H(4)MPT) to 5,10- methylenetetrahydromethanopterin K13812 - 4.1.2.43,4.2.1.147 3.424e-221 690.0
BYD1_k127_8519009_1 PFAM AMP-dependent synthetase and ligase K00666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 428.0
BYD1_k127_8519009_2 Belongs to the UPF0173 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001119 305.0
BYD1_k127_852438_0 - - - - 0.00000000000000000000000000000000001359 140.0
BYD1_k127_852438_1 PFAM cytochrome c biogenesis protein, transmembrane region - - - 0.00000000000000000000000000915 116.0
BYD1_k127_852438_2 PFAM regulatory protein, ArsR K21903 - - 0.00000000000000000000000008358 110.0
BYD1_k127_852438_3 DGC domain - - - 0.00000000002432 68.0
BYD1_k127_8535175_0 UvrD REP helicase K16899 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 395.0
BYD1_k127_8535410_0 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000004101 169.0
BYD1_k127_8535410_1 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000003409 154.0
BYD1_k127_8545948_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002697 605.0
BYD1_k127_8545948_1 Protein of unknown function (DUF4013) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000275 254.0
BYD1_k127_8545948_2 Ferredoxin thioredoxin reductase catalytic beta chain - - - 0.000000000000000000000000000000000000000568 150.0
BYD1_k127_85506_0 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 482.0
BYD1_k127_85506_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000009401 220.0
BYD1_k127_85506_2 - - - - 0.00000000000000000000000000000000000246 140.0
BYD1_k127_85506_3 - - - - 0.00000000000000000000005598 109.0
BYD1_k127_8551887_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002979 430.0
BYD1_k127_8551887_1 - - - - 0.0000000000000000000000000000000000001914 152.0
BYD1_k127_8579911_0 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000006661 199.0
BYD1_k127_8579911_1 Archaeal Type IV pilin, N-terminal - - - 0.0000000000000003677 93.0
BYD1_k127_8599891_0 amino acid ABC transporter K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006862 271.0
BYD1_k127_8599891_1 Belongs to the bacterial solute-binding protein 3 family K02030,K02424 - - 0.00000000000000000000000000000000000000004047 156.0
BYD1_k127_8617666_0 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000918 411.0
BYD1_k127_8617666_1 TIGRFAM siroheme synthase K02304 GO:0003674,GO:0003824,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0019354,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043115,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046156,GO:0046483,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.76,4.99.1.4 0.00000000000000000000000000000006453 129.0
BYD1_k127_8619192_0 Sigma factor PP2C-like phosphatases - - - 0.0000000000000000000000000000000006892 145.0
BYD1_k127_8619192_1 cheY-homologous receiver domain - - - 0.00000000000000000000001598 114.0
BYD1_k127_8642063_0 Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 436.0
BYD1_k127_8642063_1 PFAM metallophosphoesterase K07096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 374.0
BYD1_k127_8642063_2 Pfam:KaiC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 366.0
BYD1_k127_8642063_3 COG0467 RecA-superfamily ATPases implicated in signal transduction - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004114 251.0
BYD1_k127_8642063_4 PFAM peptidylprolyl isomerase FKBP-type K01802,K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000008456 237.0
BYD1_k127_8642063_5 adenylyl cyclase CyaB K05873 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000008357 226.0
BYD1_k127_8642063_6 TIR domain - - - 0.000000009629 63.0
BYD1_k127_8655723_0 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 510.0
BYD1_k127_8655723_1 Belongs to the class-II aminoacyl-tRNA synthetase family K01892 - 6.1.1.21 0.00000000000000001052 84.0
BYD1_k127_8658937_0 PFAM AAA ATPase central domain protein - - - 8.672e-209 655.0
BYD1_k127_8658937_1 Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin K17488 - 3.5.4.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 589.0
BYD1_k127_8658937_2 PFAM peptidase M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 471.0
BYD1_k127_8658937_3 Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004936 400.0
BYD1_k127_8658937_4 eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA K03238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 362.0
BYD1_k127_8658937_5 PFAM beta-lactamase domain protein K06167 - 3.1.4.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 350.0
BYD1_k127_8658937_6 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03056 - 2.7.7.6 0.00000000000000000000000000000000006459 135.0
BYD1_k127_8658937_7 Protein of unknown function DUF86 - - - 0.00000000000000000000000000000483 123.0
BYD1_k127_8658937_8 protein conserved in archaea - - - 0.00000000000000000000000000007115 117.0
BYD1_k127_8658937_9 - - - - 0.000000000000253 72.0
BYD1_k127_8671760_0 TIGRFAM F420-dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007359 332.0
BYD1_k127_8671760_1 PFAM dihydropteroate synthase, DHPS K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006796 269.0
BYD1_k127_8680929_0 PFAM aldo keto reductase K07079 - - 3.96e-202 635.0
BYD1_k127_8680929_1 Transcriptional regulator - - - 0.00000000000000000000000000000000000000116 152.0
BYD1_k127_8708006_0 PAS domain K06930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002215 430.0
BYD1_k127_8708006_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000001179 184.0
BYD1_k127_8710490_0 ATPase involved in DNA repair K03546 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 296.0
BYD1_k127_8718313_0 ATPase which is responsible for recognizing, binding, unfolding and translocation of substrate proteins into the archaeal 20S proteasome core particle. Is essential for opening the gate of the 20S proteasome via an interaction with its C- terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. Unfolding activity requires energy from ATP hydrolysis, whereas ATP binding alone promotes ATPase-20S proteasome association which triggers gate opening, and supports translocation of unfolded substrates K03420 - - 8.047e-233 730.0
BYD1_k127_8718313_1 TIGRFAM 26S proteasome subunit P45 family K03420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 449.0
BYD1_k127_8718313_2 Helix-turn-helix domain protein K03627 - - 0.0000000000000000000000000000000000000000000000000000000000000004047 223.0
BYD1_k127_8718313_3 - - - - 0.000000000000000000000000000000000000000000000000000000000006982 218.0
BYD1_k127_8718313_4 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.00000000000000000000000000000000000000000000000004303 178.0
BYD1_k127_8718313_5 - - - - 0.0000000000000000000000000002708 120.0
BYD1_k127_8723247_0 membrane-bound mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 495.0
BYD1_k127_8723247_1 PFAM Glycosyl transferase family 2 K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001009 270.0
BYD1_k127_8726263_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999,K11954 - - 2.307e-244 771.0
BYD1_k127_8726263_1 Amino acid amide ABC transporter substrate-binding protein, HAAT family K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002005 289.0
BYD1_k127_8727541_0 PFAM chaperonin Cpn60 TCP-1 K22447 - - 9e-275 853.0
BYD1_k127_8727541_1 Sulphur transport K07112 - - 0.00000000000000000000000000000000000000000000000000000000000000002099 232.0
BYD1_k127_8727541_2 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000001496 199.0
BYD1_k127_8727941_0 Pfam:DUF650 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 514.0
BYD1_k127_8727941_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 381.0
BYD1_k127_8727941_2 oligoendopeptidase F - - - 0.00000000006132 72.0
BYD1_k127_8737858_0 type II secretion system protein K07333 - - 2.622e-264 822.0
BYD1_k127_8737858_1 - - - - 0.0000000000000000000000000000000000000000000007299 172.0
BYD1_k127_8762600_0 Integral membrane protein DUF106 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 324.0
BYD1_k127_8762600_1 Belongs to the cytidylate kinase family. Type 2 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001369 280.0
BYD1_k127_8762600_2 Belongs to the archaeal adenylate kinase family K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000008313 238.0
BYD1_k127_8762600_3 Pfam:UPF0118 - - - 0.0000000000000000000000000001121 119.0
BYD1_k127_8765653_0 PFAM alpha beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000001958 233.0
BYD1_k127_8765653_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000008962 215.0
BYD1_k127_8769839_0 amino acid K03293,K16238,K20265 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 546.0
BYD1_k127_8769839_1 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 298.0
BYD1_k127_878047_0 DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks K03726 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004496 445.0
BYD1_k127_879524_0 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003614 290.0
BYD1_k127_879524_1 COG0339 Zn-dependent oligopeptidases K01414 GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006465,GO:0006508,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016485,GO:0016787,GO:0019538,GO:0034641,GO:0034645,GO:0043170,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051604,GO:0070011,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564,GO:1901576 3.4.24.70 0.00003175 51.0
BYD1_k127_8799649_0 CheC inhibitor of MCP methylation K03410 - - 0.000000000000000000000000000000000000000000000000000000000000000002384 237.0
BYD1_k127_8799649_1 Belongs to the PdaD family K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000002363 167.0
BYD1_k127_8813710_0 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily K01889 - 6.1.1.20 2.047e-261 812.0
BYD1_k127_8813710_1 PFAM aminoacyl-tRNA synthetase class Ib K01867 - 6.1.1.2 0.00000000000004335 72.0
BYD1_k127_8824771_0 Catalyzes the NAD-dependent oxidative cleavage of spermidine and the subsequent transfer of the butylamine moiety of spermidine to the epsilon-amino group of a specific lysine residue of the eIF-5A precursor protein to form the intermediate deoxyhypusine residue K00809 - 2.5.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006427 493.0
BYD1_k127_8824771_1 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004568 269.0
BYD1_k127_8824771_2 ATP-dependent agmatine transferase that catalyzes the formation of 2-agmatinylcytidine (agm2C) at the wobble position (C34) of tRNA(Ile2), converting the codon specificity from AUG to AUA K06932 - 6.3.4.22 0.00000000000000000000000000000000000000000003759 164.0
BYD1_k127_8824771_3 4-oxalocrotonate tautomerase K01821 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0044237 5.3.2.6 0.00000000006293 64.0
BYD1_k127_8826714_0 TIGRFAM NiFe hydrogenase maturation protein HypF K04656 - - 2.414e-225 707.0
BYD1_k127_8828970_0 - - - - 0.000000000000000000000000000000000000000000000000000000000006439 220.0
BYD1_k127_8828970_1 PFAM major facilitator superfamily MFS_1 - - - 0.000000000000000000000000000000005782 131.0
BYD1_k127_8828970_2 Major Facilitator - - - 0.0009593 44.0
BYD1_k127_8830121_0 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.0000000000000000000000000000000000000000000000000000005999 201.0
BYD1_k127_8830121_1 SMART DEAD-like helicase K08282 - 2.7.11.1 0.000000000000000001269 100.0
BYD1_k127_8841369_0 methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 591.0
BYD1_k127_8841369_1 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003783 332.0
BYD1_k127_8865081_0 SOS response associated peptidase (SRAP) - - - 0.000000000000000000000000000000000000000000000000004577 189.0
BYD1_k127_8865081_1 - - - - 0.0000000000003273 74.0
BYD1_k127_8865081_2 DNA polymerase activity K02319 - 2.7.7.7 0.0001643 51.0
BYD1_k127_8886665_0 Single cache domain 3 K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003713 490.0
BYD1_k127_8886665_1 TIGRFAM methionine-R-sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000003246 196.0
BYD1_k127_8886665_2 PFAM response regulator receiver - - - 0.000000000000000000004121 98.0
BYD1_k127_8886665_3 - - - - 0.0000000000001113 78.0
BYD1_k127_8888834_0 DNA (cytosine-5-)-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000003438 235.0
BYD1_k127_8888834_1 PFAM Band 7 protein - - - 0.000000000000000000004632 105.0
BYD1_k127_8889366_0 PFAM glutamate synthase alpha subunit domain protein K00202 - 1.2.7.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009968 389.0
BYD1_k127_8889366_1 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004912 341.0
BYD1_k127_8898293_0 acid binding OB-fold tRNA helicase-type K07463 - - 0.0 1018.0
BYD1_k127_8898293_1 Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA K00784 - 3.1.26.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003894 492.0
BYD1_k127_8898293_2 - - - - 0.0000000000000000000000000000000000000000481 153.0
BYD1_k127_8898293_3 - - - - 0.000000000000000000000001891 103.0
BYD1_k127_8917447_0 Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L-cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)) K06868 - 2.5.1.73 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 411.0
BYD1_k127_8917447_1 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS K03151 - 2.8.1.4 0.000000000000000000791 89.0
BYD1_k127_8934600_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 354.0
BYD1_k127_8934600_1 - - - - 0.00000003469 55.0
BYD1_k127_8940453_0 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 337.0
BYD1_k127_8949902_0 - - - - 0.00001551 48.0
BYD1_k127_8961170_0 PhoD-like phosphatase K01113 - 3.1.3.1 0.00000000000000000000000000000000000000000000000000000000000003158 219.0
BYD1_k127_8961170_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000002475 134.0
BYD1_k127_8964174_0 Phosphate uptake regulator, PhoU - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000107 263.0
BYD1_k127_8964174_1 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003258 256.0
BYD1_k127_8975631_0 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses K03561,K12287 - - 0.0000000000000000000000000000000000000000000000000000002993 215.0
BYD1_k127_8980974_0 Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 K03243 - - 1.298e-213 670.0
BYD1_k127_8994727_0 hydrolase, family 3 K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003303 286.0
BYD1_k127_8994727_1 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001605 271.0
BYD1_k127_8994727_2 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000559 152.0
BYD1_k127_8994727_3 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000000000000004527 141.0
BYD1_k127_9011027_0 PFAM ATPase associated with various cellular activities, AAA_3 K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 323.0
BYD1_k127_9011027_1 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000001607 134.0
BYD1_k127_9011801_0 Papain family cysteine protease - - - 0.0000000000000000005409 94.0
BYD1_k127_9011801_1 Subtilase family - - - 0.000000000000002817 80.0
BYD1_k127_9029502_0 D-isomer specific 2-hydroxyacid dehydrogenase catalytic K00058 - 1.1.1.399,1.1.1.95 1.912e-291 901.0
BYD1_k127_9029502_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008983 536.0
BYD1_k127_9037320_0 ATP-binding region, ATPase domain protein K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 371.0
BYD1_k127_9037320_1 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000002346 258.0
BYD1_k127_9038613_0 Belongs to the HMG-CoA reductase family K00021 - 1.1.1.34 6.351e-198 625.0
BYD1_k127_9038613_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 453.0
BYD1_k127_9038613_2 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 426.0
BYD1_k127_9038613_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K06930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 406.0
BYD1_k127_9038613_4 Methyltransferase K15429 - 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 343.0
BYD1_k127_9038613_5 Transcriptional regulator K07108 - - 0.00000000000000000000000000000007142 128.0
BYD1_k127_9040270_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003875 505.0
BYD1_k127_9040270_1 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.000000000000000000000000000000000000000000000000000008601 198.0
BYD1_k127_9040270_2 protein conserved in archaea - - - 0.00000000000000000000000001846 110.0
BYD1_k127_9047512_0 Prephenate dehydratase K04518 - 4.2.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 350.0
BYD1_k127_9047512_1 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 286.0
BYD1_k127_9054035_0 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 327.0
BYD1_k127_9054035_1 KH, type 1, domain K07041 - - 0.000000000000000000000000000000000000000000000000000002009 191.0
BYD1_k127_9054035_2 Methyltransferase type 11 - - - 0.000000000000000000000000000000000000000000000517 175.0
BYD1_k127_90668_0 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K11645,K16306 - 2.2.1.10,4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000424 425.0
BYD1_k127_90668_1 Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis K11646 - 1.4.1.24 0.0000000000000000000000000000000000000000000000000000000001065 207.0
BYD1_k127_90668_2 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K16306 - 2.2.1.10,4.1.2.13 0.00000000000004815 72.0
BYD1_k127_9074539_0 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007111 362.0
BYD1_k127_9074539_1 Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import K02007,K02009 GO:0000041,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0008150,GO:0016020,GO:0016021,GO:0030001,GO:0031224,GO:0032991,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0071944,GO:0072511,GO:0098533,GO:0098796,GO:0098797,GO:1902494,GO:1902495,GO:1904949,GO:1990351 - 0.000000000000000000000000000000002946 131.0
BYD1_k127_9079646_0 formylmethanofuran dehydrogenase, subunit E K11261 - 1.2.7.12 0.00000000000000000000000000000000000000000000000000000000000000000000000002808 255.0
BYD1_k127_9079646_1 PFAM Methyltransferase type - - - 0.00000000000008699 72.0
BYD1_k127_9084995_0 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 3.6e-273 846.0
BYD1_k127_9084995_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 428.0
BYD1_k127_9084995_2 peptidase S8 and S53, subtilisin, kexin, sedolisin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005598 370.0
BYD1_k127_9084995_3 - - - - 0.00000001254 58.0
BYD1_k127_9091653_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003576 578.0
BYD1_k127_9091653_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000001224 184.0
BYD1_k127_911744_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 584.0
BYD1_k127_911744_1 B-block binding subunit of TFIIIC - - - 0.000000000000000000000000000000000000000000000000000000002778 201.0
BYD1_k127_911744_2 PFAM Like-Sm ribonucleoprotein, core - - - 0.000000000000000000000000000000002447 130.0
BYD1_k127_9125293_0 flavodoxin nitric oxide synthase K19817 - 1.5.3.22 2.013e-222 694.0
BYD1_k127_9125293_1 Catalyzes the irreversible beta-carboxylation of phosphoenolpyruvate (PEP) to form oxaloacetate (OAA), a four- carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 309.0
BYD1_k127_9125293_2 V4R K07013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002766 283.0
BYD1_k127_9125293_3 Predicted metal-binding protein (DUF2284) - - - 0.000000000000000000000000000000000000000000000000004558 188.0
BYD1_k127_9126043_0 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 384.0
BYD1_k127_914174_0 Molybdopterin oxidoreductase Fe4S4 domain K00123 - 1.17.1.9 2.931e-207 647.0
BYD1_k127_9147627_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03042 - 2.7.7.6 2.454e-271 840.0
BYD1_k127_9147627_1 TIR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001688 278.0
BYD1_k127_9147627_2 transcription termination protein NusA K02600 - - 0.00000000000000000000000000000000000000000000000000000000000000000001181 235.0
BYD1_k127_9147627_3 Protein of unknown function (DUF473) K09135 - - 0.0000000000000000000000000000000000000000000000000000005495 195.0
BYD1_k127_9147627_4 PFAM ribosomal protein L7Ae L30e S12e Gadd45 K02908 - - 0.0000000000000000000000000000000000000003764 150.0
BYD1_k127_9148947_0 Domain of unknown function (DUF3821) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000316 615.0
BYD1_k127_9148947_1 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000000000000000008223 168.0
BYD1_k127_9152740_0 Uncharacterized protein conserved in archaea (DUF2193) - - - 2.462e-230 721.0
BYD1_k127_9152740_1 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001627 248.0
BYD1_k127_9152740_2 Uncharacterized protein conserved in archaea (DUF2180) - - - 0.0000000000000002048 78.0
BYD1_k127_918987_0 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005616 288.0
BYD1_k127_918987_1 Domain of unknown function (DUF4349) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001189 254.0
BYD1_k127_918987_2 PFAM amino acid-binding ACT domain protein K06862 - - 0.0000000000000000000000000000000000000000000000000000000000000003071 223.0
BYD1_k127_918987_3 COG0589 Universal stress protein UspA and related nucleotide-binding proteins - - - 0.000000000000000000000000000000000000000000000000001135 186.0
BYD1_k127_918987_4 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 - 3.5.2.3 0.0000000000000000000000000000000000002364 144.0
BYD1_k127_9194633_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02488 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 610.0
BYD1_k127_9196532_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 473.0
BYD1_k127_9196532_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 342.0
BYD1_k127_9197053_0 PFAM PKD domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 475.0
BYD1_k127_9197053_1 PhoD-like phosphatase K01179 - 3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002293 345.0
BYD1_k127_9197053_2 COG1520 FOG WD40-like repeat - - - 0.00000000004688 73.0
BYD1_k127_9213250_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003564 319.0
BYD1_k127_9213250_1 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004066 284.0
BYD1_k127_9213250_2 Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1- phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000001292 180.0
BYD1_k127_9213250_3 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000001253 144.0
BYD1_k127_9213250_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000002232 137.0
BYD1_k127_9224302_0 Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs K03177,K11131 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006098 392.0
BYD1_k127_9224302_1 Tripartite tricarboxylate transporter TctA family K08971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842 389.0
BYD1_k127_9224302_2 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 374.0
BYD1_k127_9224302_3 PFAM Pre-mRNA processing ribonucleoprotein, binding K14564 - - 0.0000000000000000000000000000000000000000000000000000000004618 212.0
BYD1_k127_9224302_4 Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA K04795 - - 0.000000000000000000000000000000000000000000000008442 178.0
BYD1_k127_9224302_5 Domain of unknown function (DUF3821) - - - 0.00000000000000000000000000000000000000003236 153.0
BYD1_k127_9224302_6 PFAM isocitrate isopropylmalate dehydrogenase K00052 - 1.1.1.85 0.0000000000000005018 78.0
BYD1_k127_9228861_0 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004282 256.0
BYD1_k127_9228861_1 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000005546 194.0
BYD1_k127_9232283_0 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 351.0
BYD1_k127_9232283_1 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily K05830 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000001519 162.0
BYD1_k127_9232283_2 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000122 66.0
BYD1_k127_9260916_0 Produces ATP from ADP in the presence of a proton gradient across the membrane K02120 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003705 254.0
BYD1_k127_9260916_1 Produces ATP from ADP in the presence of a proton gradient across the membrane K02119 - - 0.0000000000000000000000000000000000000000000001599 170.0
BYD1_k127_9270146_0 RNA methylase K07446 - 2.1.1.213 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 411.0
BYD1_k127_9270146_1 Methylase of chemotaxis methyl-accepting K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 330.0
BYD1_k127_9270146_2 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 - 3.1.2.6 0.0000000000000000000000000000000000000000002994 161.0
BYD1_k127_9271500_0 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000000000000000000000000000006572 211.0
BYD1_k127_9271500_1 - K12512 - - 0.00000009774 59.0
BYD1_k127_9292241_0 Coenzyme F420 hydrogenase dehydrogenase, beta subunit K00125 - 1.17.1.9 5.001e-234 727.0
BYD1_k127_9292241_1 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000001902 119.0
BYD1_k127_9292241_2 PFAM molybdopterin oxidoreductase K00123,K05299 - 1.17.1.10,1.17.1.9 0.000000000000000000000000143 110.0
BYD1_k127_9292241_3 - - - - 0.00000000000000001485 89.0
BYD1_k127_929732_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K03231 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 4.654e-233 723.0
BYD1_k127_929732_1 - - - - 0.000000000000000000000000000000000000000001395 157.0
BYD1_k127_9318071_0 Ribonuclease R winged-helix domain K09720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000489 377.0
BYD1_k127_9318071_1 Involved in cell shape control K22222 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0044424,GO:0044464,GO:0051301,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003317 293.0
BYD1_k127_9320188_0 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000002904 267.0
BYD1_k127_9320188_1 histidine kinase A domain protein - - - 0.00000000000000000008606 99.0
BYD1_k127_9320231_0 PFAM AIR synthase related protein K07123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003185 501.0
BYD1_k127_9320231_1 Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA K04800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006204 324.0
BYD1_k127_9375844_0 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 392.0
BYD1_k127_9375844_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000009968 193.0
BYD1_k127_9386908_0 4Fe-4S ferredoxin iron-sulfur binding domain protein K03388 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 6.061e-210 660.0
BYD1_k127_9386908_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000342 287.0
BYD1_k127_9386908_2 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000003377 223.0
BYD1_k127_9386908_3 TIGRFAM cytidyltransferase-related domain K02201 - 2.7.7.3 0.00000000000000000001635 91.0
BYD1_k127_9392676_0 phenylalanyl-tRNA synthetase beta subunit K01890 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004169 309.0
BYD1_k127_9392676_1 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000000000000000000000000000000000000000000000000007078 205.0
BYD1_k127_9392676_2 - - - - 0.00000000000000000000000002361 111.0
BYD1_k127_9393725_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 7.418e-278 861.0
BYD1_k127_9403101_0 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 284.0
BYD1_k127_9403101_1 ATPases associated with a variety of cellular activities K02006 - - 0.000000000000000000000000000000000000000000000000005464 183.0
BYD1_k127_9403101_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000002944 184.0
BYD1_k127_9406373_0 DNA polymerase activity K02319 - 2.7.7.7 0.0000000000203 72.0
BYD1_k127_9406373_1 Belongs to the glycosyl hydrolase 8 (cellulase D) family - - - 0.00002833 54.0
BYD1_k127_9410340_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006001 571.0
BYD1_k127_9410340_1 PFAM HhH-GPD family protein K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 331.0
BYD1_k127_9410340_2 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit K03399 - 2.1.1.289 0.00000000000000000000000000000000000000000000000000000000000002383 220.0
BYD1_k127_9417862_0 DNA polymerase elongation subunit (Family B) K02319 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 462.0
BYD1_k127_9417862_1 DNA polymerase activity K02319 - 2.7.7.7 0.000000000000000000000000004589 116.0
BYD1_k127_9419106_0 Papain family cysteine protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000755 267.0
BYD1_k127_9419232_0 COG1404 Subtilisin-like serine proteases K14645 GO:0005575,GO:0005576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003026 370.0
BYD1_k127_9419232_1 PEGA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002908 250.0
BYD1_k127_9421402_0 COG0025 NhaP-type Na H and K H K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 374.0
BYD1_k127_944318_0 PFAM Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 362.0
BYD1_k127_9445663_0 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004004 273.0
BYD1_k127_9445663_1 COG1132 ABC-type multidrug transport system, ATPase and permease components K06147,K11085 - - 0.000000000000000000000000000000000000000000000001108 182.0
BYD1_k127_9445663_2 Large-conductance mechanosensitive channel, MscL K03282 - - 0.00000000000000000000000000000000000000000001424 164.0
BYD1_k127_9446753_0 PFAM SufBD protein K07033 - - 5.809e-205 642.0
BYD1_k127_9446753_1 sugar phosphatases of the HAD superfamily K02566 - - 0.000000000000000000000000000000000000000000000000000000001432 207.0
BYD1_k127_9446753_2 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000002417 89.0
BYD1_k127_9448432_0 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004819 354.0
BYD1_k127_9455672_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007213 594.0
BYD1_k127_9455672_1 Diguanylate cyclase - - - 0.00007601 50.0
BYD1_k127_9457435_0 His Kinase A (phosphoacceptor) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000003529 207.0
BYD1_k127_9457435_1 PhoD-like phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000007108 187.0
BYD1_k127_9467105_0 COG0025 NhaP-type Na H and K H K03316 - - 0.0000000000000000000000000000000000003326 151.0
BYD1_k127_9467105_1 Chloramphenicol phosphotransferase-like protein K18554 - - 0.000000000003091 73.0
BYD1_k127_9468977_0 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007816 605.0
BYD1_k127_9470218_0 Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P) K09733 - 4.2.3.153 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 328.0
BYD1_k127_9470218_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007006 276.0
BYD1_k127_9472530_0 - - - - 0.00000000000000000000000000000000000000000000000000000000005007 211.0
BYD1_k127_9472530_1 Papain family cysteine protease - - - 0.00000000000000000000000000003103 119.0
BYD1_k127_9475415_0 PAS domain K00974,K02485 - 2.7.7.72 0.00000000000000006976 83.0
BYD1_k127_9480842_0 Possesses two activities a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase K02323 - 2.7.7.7 6.915e-214 669.0
BYD1_k127_9480842_1 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000001658 147.0
BYD1_k127_9481027_0 PFAM type II secretion system protein E K07332 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 532.0
BYD1_k127_9481027_1 type II secretion system protein K07333 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 323.0
BYD1_k127_9481099_0 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 7.21e-296 924.0
BYD1_k127_9481099_1 sugar phosphatases of the HAD superfamily K02566 - - 0.00000000000000000000000000000000000000000000000000000000000000002343 230.0
BYD1_k127_9492968_0 Formate hydrogenlyase subunit 6 NADH ubiquinone oxidoreductase 23 kD subunit (chain I) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 605.0
BYD1_k127_9522214_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000007492 183.0
BYD1_k127_9522214_1 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.00000000000000138 78.0
BYD1_k127_9532594_0 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000186 387.0
BYD1_k127_9532594_1 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000009443 164.0
BYD1_k127_9535378_0 DEAD DEAH box helicase domain protein K03724 - - 0.0 1347.0
BYD1_k127_9535378_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 0.0 1053.0
BYD1_k127_9535378_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.05e-233 727.0
BYD1_k127_9535378_3 PFAM response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000004932 201.0
BYD1_k127_9535378_4 - - - - 0.0000000000000000000000000000000000000000000000000003288 189.0
BYD1_k127_9535378_5 - - - - 0.000000000000000008861 84.0
BYD1_k127_9542831_0 APHP domain protein - - - 0.0000000000001503 75.0
BYD1_k127_9545700_0 Subtilase family K14645 GO:0005575,GO:0005576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008358 495.0
BYD1_k127_9566868_0 methyl-accepting chemotaxis protein K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003191 339.0
BYD1_k127_9568278_0 Succinate dehydrogenase fumarate reductase flavoprotein subunit K00239,K18209 GO:0003674,GO:0003824,GO:0006091,GO:0008150,GO:0008152,GO:0009055,GO:0009061,GO:0009987,GO:0015980,GO:0016491,GO:0022900,GO:0044237,GO:0045333,GO:0055114 1.3.4.1,1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 493.0
BYD1_k127_9568278_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K18210 - 1.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 336.0
BYD1_k127_9591401_0 Molybdopterin oxidoreductase K00201 - 1.2.7.12 4.59e-223 698.0
BYD1_k127_9591401_1 Nitrite and sulphite reductase 4Fe-4S - GO:0003674,GO:0003824,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016002,GO:0016491,GO:0016667,GO:0016673,GO:0019419,GO:0044237,GO:0050311,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005935 390.0
BYD1_k127_9591401_2 PFAM molydopterin dinucleotide-binding region K00203 - 1.2.7.12 0.0000000000000000000000000000000000000000000000000000000000001416 216.0
BYD1_k127_9591401_3 - - - - 0.000000000000000000000000000000000000000000000000000008071 194.0
BYD1_k127_9591401_4 Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule - - - 0.000000000000000000079 89.0
BYD1_k127_9591401_5 Formylmethanofuran dehydrogenase subunit A K00200 - 1.2.7.12 0.0000000000000008131 77.0
BYD1_k127_9592968_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007178 452.0
BYD1_k127_9592968_1 - - - - 0.00000000000000000000000000000000000000000000000000000000663 203.0
BYD1_k127_9592968_2 peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000007036 165.0
BYD1_k127_9598760_0 4-amino-4-deoxy-L-arabinose transferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 522.0
BYD1_k127_9598760_1 Bacterial membrane protein, YfhO - - - 0.00000000000000000000000000002185 130.0
BYD1_k127_9606705_1 COG2076 Membrane transporters of cations and cationic drugs K11741 - - 0.0000000000000000000000000000000000000005495 150.0
BYD1_k127_9614385_0 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 599.0
BYD1_k127_9614385_1 extracellular matrix structural constituent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008871 511.0
BYD1_k127_9614385_2 ABC-type antimicrobial peptide transport system, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 359.0
BYD1_k127_9614385_3 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000003003 205.0
BYD1_k127_9614992_0 PEP-utilising enzyme, TIM barrel domain K01006 - 2.7.9.1 9.319e-207 649.0
BYD1_k127_9625435_0 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000211 156.0
BYD1_k127_9625435_1 META domain - - - 0.00001116 54.0
BYD1_k127_9626469_0 COG0467 RecA-superfamily ATPases implicated in signal transduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006715 410.0
BYD1_k127_9626469_1 PFAM type II secretion system protein E K07332 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 374.0
BYD1_k127_9632638_0 Belongs to the NifD NifK NifE NifN family K02592 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009075 332.0
BYD1_k127_9632638_1 cobalamin (vitamin B12) biosynthesis CbiX protein - - - 0.00000000000000000000000000000000000000000000000000000000007557 204.0
BYD1_k127_9632638_2 Iron only nitrogenase protein AnfO (AnfO_nitrog) - - - 0.000000000000000000000003974 106.0
BYD1_k127_9653368_0 Mn2 dependent serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003388 278.0
BYD1_k127_9653368_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002306 246.0
BYD1_k127_9653368_2 - - - - 0.000000000000000000000000000000000000000000000000000000000003782 214.0
BYD1_k127_9653368_3 Nucleoside 2-deoxyribosyltransferase like K08728 - 2.4.2.6 0.000000000000000000000001212 106.0
BYD1_k127_9659358_0 Lysine 2,3-aminomutase YodO family protein K01843 - 5.4.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 596.0
BYD1_k127_9659358_1 TIGRFAM lysine 2,3-aminomutase YodO family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 383.0
BYD1_k127_9659358_2 Acetyltransferase (GNAT) family K21935 - 2.3.1.264 0.0000000000000000000001363 104.0
BYD1_k127_9662088_0 Aldo/keto reductase family K07079 - - 0.00000000000000000000000000000000000000000000000000000000000000008692 224.0
BYD1_k127_9662088_2 (GNAT) family - - - 0.00000000000005026 72.0
BYD1_k127_9682875_0 TIGRFAM PAS sensor protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002302 239.0
BYD1_k127_9682875_1 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000001294 60.0
BYD1_k127_9683227_0 Conserved region in glutamate synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 586.0
BYD1_k127_9683227_1 PFAM Ferritin Dps family protein K02217 - 1.16.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006566 271.0
BYD1_k127_9692286_0 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004129 343.0
BYD1_k127_9692286_1 HB1, ASXL, restriction endonuclease HTH domain K09805 - - 0.000000000000000000000000000000000000000000004357 171.0
BYD1_k127_9692286_2 PFAM helix-turn-helix HxlR type - - - 0.00000000000001608 74.0
BYD1_k127_9692286_3 - - - - 0.0000000114 56.0
BYD1_k127_9712745_0 Dihydroorotate dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002801 378.0
BYD1_k127_9712745_1 Zn-dependent hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005796 267.0
BYD1_k127_9719881_0 Sugar-specific transcriptional regulator TrmB - - - 0.00000000000000000000000000000000000000227 154.0
BYD1_k127_9719881_1 COG1361 S-layer domain - - - 0.00000000000000000000000001944 115.0
BYD1_k127_9721452_0 PFAM PilT protein domain protein K06865 - - 8e-323 996.0
BYD1_k127_9721452_1 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03166 - 5.99.1.3 1.95e-200 627.0
BYD1_k127_9721452_2 Relaxes both positive and negative superturns and exhibits a strong decatenase activity K03167 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006872 469.0
BYD1_k127_9721452_3 Peptidase A24A, prepilin type IV K07991 - 3.4.23.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008749 433.0
BYD1_k127_9721452_4 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.0000000000000000000000000000000000000000000000001595 181.0
BYD1_k127_9734472_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003557 323.0
BYD1_k127_9734472_1 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005769 291.0
BYD1_k127_9734472_2 glycosyl transferase family K07151 - 2.4.99.18 0.0000000000000000001037 104.0
BYD1_k127_9739162_0 ATP-binding region, ATPase domain protein domain protein - - - 5.279e-233 758.0
BYD1_k127_9739635_0 Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 527.0
BYD1_k127_9751623_0 by modhmm - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009203 537.0
BYD1_k127_9751623_1 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005597 266.0
BYD1_k127_9751623_2 PFAM Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009054 246.0
BYD1_k127_9751623_3 PFAM Cache, type 2 domain protein K02030 - - 0.000000000000000000000000006429 120.0
BYD1_k127_9764257_0 His Kinase A (phospho-acceptor) domain - - - 1.409e-277 866.0
BYD1_k127_9764257_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 477.0
BYD1_k127_9764257_2 cheY-homologous receiver domain - - - 0.0000000000000326 74.0
BYD1_k127_9798607_0 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 2.548e-198 624.0
BYD1_k127_9798607_1 TIGRFAM PAS sensor protein - - - 0.00000000000000007865 93.0
BYD1_k127_9805438_0 Pas domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005568 499.0
BYD1_k127_9805779_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 8.181e-213 668.0
BYD1_k127_9805779_1 TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 497.0
BYD1_k127_9805779_2 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 447.0
BYD1_k127_9805779_3 Nitroreductase family - - - 0.000000000000000000000000000000000000000000000000000000000009885 208.0
BYD1_k127_9805779_4 TPR Domain containing protein - - - 0.00000000001301 68.0
BYD1_k127_981221_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384,K03387 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002087 589.0
BYD1_k127_981221_1 DNA methylase K00590 - 2.1.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003647 567.0
BYD1_k127_981221_2 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K18210 - 1.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 448.0
BYD1_k127_981221_3 PFAM metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001751 264.0
BYD1_k127_981221_4 - - - - 0.000000000000000000000000000000000000000000000000000002255 196.0
BYD1_k127_9821257_0 HNH endonuclease - - - 0.000000000000000008304 86.0
BYD1_k127_9822283_0 NADH:flavin oxidoreductase / NADH oxidase family K10680 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 519.0
BYD1_k127_9822283_1 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001069 284.0
BYD1_k127_9822283_2 PFAM flavin reductase domain protein, FMN-binding - - - 0.000000000000000000000000000000000000000000000000007877 184.0
BYD1_k127_9848822_0 extracellular matrix structural constituent - - - 1.653e-310 972.0
BYD1_k127_9848822_1 extracellular matrix structural constituent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007206 398.0
BYD1_k127_9862976_0 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001324 470.0
BYD1_k127_9862976_1 Chemotaxis signal transduction protein K03408 - - 0.00000006736 56.0
BYD1_k127_9862976_2 transposase activity K07481 - - 0.0009593 44.0
BYD1_k127_9869392_0 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000007634 239.0
BYD1_k127_9882198_0 Domain of unknown function (DUF362) K07138 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001498 568.0
BYD1_k127_9882198_1 Auxin Efflux Carrier K07088 - - 0.00000000000005925 72.0
BYD1_k127_9893330_0 TIGRFAM PAS sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004275 360.0
BYD1_k127_9896594_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007295 448.0
BYD1_k127_9896594_1 Archaeal flagellar protein G K07330 - - 0.00000000000000000000000000000003703 128.0
BYD1_k127_9896594_2 Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family K01486 - 3.5.4.2 0.0000695 46.0
BYD1_k127_9915249_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 460.0
BYD1_k127_9915249_1 HI0933 family K07007 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 428.0
BYD1_k127_9915249_2 PAS domain - - - 0.00000000000000000000000000000001615 135.0
BYD1_k127_9920794_0 DNA integration - - - 0.000000000000000000003444 102.0
BYD1_k127_995065_0 TIGRFAM hydrogenase expression formation protein HypD K04654 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 388.0
BYD1_k127_995065_1 Mechanosensitive ion channel K16052 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 291.0
BYD1_k127_9985501_0 Heat shock 70 kDa protein - - - 3.17e-279 867.0
BYD1_k127_9985501_1 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687,K04043 - - 0.000000000000000000000000000000000000000000000000000000000000000000001133 246.0
BYD1_k127_9985501_2 PFAM alpha beta hydrolase fold - - - 0.00002703 46.0
BYD1_k127_9987878_0 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 292.0
BYD1_k127_9987878_1 transcriptional regulators - - - 0.000000000000000000000000005278 112.0