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Overview

ID MAG00046
Name BYD1_bin.64
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Steroidobacterales
Family Steroidobacteraceae
Genus SCUD01
Species
Assembly information
Completeness (%) 77.53
Contamination (%) 2.87
GC content (%) 69.0
N50 (bp) 51,284
Genome size (bp) 2,495,435

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2278

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10184019_0 COG1233 Phytoene dehydrogenase and related proteins - - - 1.031e-258 811.0
BYD1_k127_10184019_1 COG0457 FOG TPR repeat - - - 6.248e-239 759.0
BYD1_k127_10184019_10 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004535 467.0
BYD1_k127_10184019_11 COG1233 Phytoene dehydrogenase and related proteins K10027,K10210 - 1.14.99.44,1.3.99.26,1.3.99.28,1.3.99.29,1.3.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 467.0
BYD1_k127_10184019_12 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008709 476.0
BYD1_k127_10184019_13 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 398.0
BYD1_k127_10184019_14 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00479,K05549,K05708,K14748,K16319 - 1.14.12.1,1.14.12.10,1.14.12.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009738 386.0
BYD1_k127_10184019_15 Putrescine transport system permease K11075 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001563 369.0
BYD1_k127_10184019_16 Bacterial extracellular solute-binding protein K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002575 367.0
BYD1_k127_10184019_17 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006344 370.0
BYD1_k127_10184019_18 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 356.0
BYD1_k127_10184019_19 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 339.0
BYD1_k127_10184019_2 belongs to the aldehyde dehydrogenase family K09472 - 1.2.1.99 5.139e-213 672.0
BYD1_k127_10184019_20 ABC-type spermidine putrescine transport system, permease component II K11074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 327.0
BYD1_k127_10184019_21 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K17837 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004817 321.0
BYD1_k127_10184019_22 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001214 261.0
BYD1_k127_10184019_23 Enoyl-CoA hydratase/isomerase K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000003327 269.0
BYD1_k127_10184019_24 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000001712 241.0
BYD1_k127_10184019_25 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000002533 206.0
BYD1_k127_10184019_26 BetI-type transcriptional repressor, C-terminal - - - 0.00000000000000000000000000000000000000000000000000333 189.0
BYD1_k127_10184019_27 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000001293 174.0
BYD1_k127_10184019_28 Aminoacyl-tRNA editing domain K19055 - - 0.00000000000000000000000000000000000000007779 168.0
BYD1_k127_10184019_29 PFAM UbiA prenyltransferase - - - 0.00003588 48.0
BYD1_k127_10184019_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 5.961e-206 649.0
BYD1_k127_10184019_30 Carboxypeptidase - - - 0.0007853 51.0
BYD1_k127_10184019_4 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 1.181e-202 640.0
BYD1_k127_10184019_5 COG1042 Acyl-CoA synthetase (NDP forming) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 631.0
BYD1_k127_10184019_6 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 608.0
BYD1_k127_10184019_7 TonB dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 604.0
BYD1_k127_10184019_8 PFAM amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003305 526.0
BYD1_k127_10184019_9 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008227 503.0
BYD1_k127_10626532_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1099.0
BYD1_k127_10626532_1 AAA-like domain - - - 3.339e-243 778.0
BYD1_k127_10626532_10 Belongs to the helicase family. UvrD subfamily K10742 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000579 224.0
BYD1_k127_10626532_11 - - - - 0.000000000000000000000000000000000000000000000000000000001066 230.0
BYD1_k127_10626532_12 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000008148 215.0
BYD1_k127_10626532_13 Domain of unknown function (DUF4437) - - - 0.0000000000000000000000000000000000000000000000000002235 191.0
BYD1_k127_10626532_14 PFAM FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000001733 161.0
BYD1_k127_10626532_15 WHG domain - - - 0.00000000000000000000000000000000000002723 155.0
BYD1_k127_10626532_16 Universal stress protein family - - - 0.000000000000000000000000000000001636 146.0
BYD1_k127_10626532_17 Bacterial protein of unknown function (DUF885) - - - 0.000000000005188 73.0
BYD1_k127_10626532_18 SnoaL-like domain - - - 0.000000000007478 72.0
BYD1_k127_10626532_19 - - - - 0.00000001314 63.0
BYD1_k127_10626532_2 MBOAT, membrane-bound O-acyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000211 602.0
BYD1_k127_10626532_3 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 518.0
BYD1_k127_10626532_4 Lecithin:cholesterol acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 362.0
BYD1_k127_10626532_5 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001037 342.0
BYD1_k127_10626532_6 Amino acid permease K03294 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007706 289.0
BYD1_k127_10626532_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003686 264.0
BYD1_k127_10626532_8 Biotin-lipoyl like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001274 259.0
BYD1_k127_10626532_9 COG0346 Lactoylglutathione lyase and related lyases - - - 0.0000000000000000000000000000000000000000000000000000000000000006851 226.0
BYD1_k127_1065661_0 GHMP kinases N terminal domain K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000361 186.0
BYD1_k127_1065661_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000002675 147.0
BYD1_k127_1065661_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000002197 145.0
BYD1_k127_10679805_0 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 4.995e-311 960.0
BYD1_k127_10679805_1 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 4.416e-260 813.0
BYD1_k127_10679805_10 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000003572 264.0
BYD1_k127_10679805_11 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000001421 260.0
BYD1_k127_10679805_12 FR47-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002506 227.0
BYD1_k127_10679805_13 Methyladenine glycosylase K01246 - 3.2.2.20 0.0000000000000000000000000000000000000000000000000000000000005616 222.0
BYD1_k127_10679805_14 - - - - 0.0000000000000000000000000000000000000000000000000000003558 199.0
BYD1_k127_10679805_15 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.000000000000000000000000000000000000000000000000000001999 210.0
BYD1_k127_10679805_16 Cytochrome c oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000004089 198.0
BYD1_k127_10679805_17 - - - - 0.000000000000000000000000000000000000000000000000000006749 197.0
BYD1_k127_10679805_18 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000158 204.0
BYD1_k127_10679805_19 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000001575 198.0
BYD1_k127_10679805_2 Cytochrome C oxidase subunit II, periplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 569.0
BYD1_k127_10679805_20 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000002667 182.0
BYD1_k127_10679805_21 oxidase (Subunit iv) - - - 0.0000000000000000000000000000000000000003478 151.0
BYD1_k127_10679805_22 DoxX family K15977 - - 0.000000000000000000000000000000000003856 141.0
BYD1_k127_10679805_23 Domain of unknown function (DUF4126) - - - 0.0000000000000000000000000000000009868 147.0
BYD1_k127_10679805_25 - - - - 0.00000000000000003564 89.0
BYD1_k127_10679805_26 - - - - 0.0000000000002775 81.0
BYD1_k127_10679805_27 Protein of unknown function (DUF2384) - - - 0.000003876 52.0
BYD1_k127_10679805_3 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 525.0
BYD1_k127_10679805_4 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 402.0
BYD1_k127_10679805_5 Cytochrome c oxidase subunit III K02276,K02299 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 336.0
BYD1_k127_10679805_6 membrane K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 342.0
BYD1_k127_10679805_7 ornithine cyclodeaminase activity K01750,K18258,K19244 - 1.4.1.1,1.5.1.25,4.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003947 314.0
BYD1_k127_10679805_8 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000033 294.0
BYD1_k127_10679805_9 VIT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007659 276.0
BYD1_k127_10731619_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1261.0
BYD1_k127_10731619_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1191.0
BYD1_k127_10731619_10 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 615.0
BYD1_k127_10731619_11 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 594.0
BYD1_k127_10731619_12 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004868 582.0
BYD1_k127_10731619_13 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002927 569.0
BYD1_k127_10731619_14 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 GO:0000287,GO:0003674,GO:0003824,GO:0004812,GO:0004828,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006434,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009059,GO:0009069,GO:0009070,GO:0009987,GO:0010467,GO:0016053,GO:0016070,GO:0016259,GO:0016260,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000732 538.0
BYD1_k127_10731619_15 single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 543.0
BYD1_k127_10731619_16 secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005131 546.0
BYD1_k127_10731619_17 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 478.0
BYD1_k127_10731619_18 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001481 477.0
BYD1_k127_10731619_19 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0033818,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 446.0
BYD1_k127_10731619_2 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1062.0
BYD1_k127_10731619_20 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 456.0
BYD1_k127_10731619_21 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 444.0
BYD1_k127_10731619_22 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 427.0
BYD1_k127_10731619_23 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 420.0
BYD1_k127_10731619_24 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 415.0
BYD1_k127_10731619_25 aminotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 406.0
BYD1_k127_10731619_26 Peptidogalycan biosysnthesis/recognition K09919 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 392.0
BYD1_k127_10731619_27 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 377.0
BYD1_k127_10731619_28 COG0076 Glutamate decarboxylase and related PLP-dependent - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 374.0
BYD1_k127_10731619_29 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000409 381.0
BYD1_k127_10731619_3 Belongs to the ClpA ClpB family K03694 - - 0.0 1054.0
BYD1_k127_10731619_30 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 366.0
BYD1_k127_10731619_31 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008875 364.0
BYD1_k127_10731619_32 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 337.0
BYD1_k127_10731619_33 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008489 328.0
BYD1_k127_10731619_34 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 327.0
BYD1_k127_10731619_35 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000417 328.0
BYD1_k127_10731619_36 L,D-transpeptidase catalytic domain K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004844 325.0
BYD1_k127_10731619_37 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 306.0
BYD1_k127_10731619_38 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 310.0
BYD1_k127_10731619_39 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 305.0
BYD1_k127_10731619_4 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.81e-292 913.0
BYD1_k127_10731619_40 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042802,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 302.0
BYD1_k127_10731619_41 Belongs to the BI1 family K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003253 281.0
BYD1_k127_10731619_42 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007684 286.0
BYD1_k127_10731619_43 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001479 285.0
BYD1_k127_10731619_44 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004405 280.0
BYD1_k127_10731619_45 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007519 275.0
BYD1_k127_10731619_46 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000001185 271.0
BYD1_k127_10731619_47 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000001063 267.0
BYD1_k127_10731619_48 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000126 261.0
BYD1_k127_10731619_49 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.00000000000000000000000000000000000000000000000000000000000000000000000006571 262.0
BYD1_k127_10731619_5 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.667e-287 891.0
BYD1_k127_10731619_50 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001165 247.0
BYD1_k127_10731619_51 PFAM MotA TolQ ExbB proton channel K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000003378 239.0
BYD1_k127_10731619_52 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 - 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000001089 226.0
BYD1_k127_10731619_53 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000007638 210.0
BYD1_k127_10731619_54 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000003629 202.0
BYD1_k127_10731619_55 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000006512 189.0
BYD1_k127_10731619_56 Negative regulator of sigma E activity K03598 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0044464,GO:0045152 - 0.00000000000000000000000000000000000000000000000001963 192.0
BYD1_k127_10731619_57 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.0000000000000000000000000000000000000000000003311 184.0
BYD1_k127_10731619_58 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000009471 187.0
BYD1_k127_10731619_59 peptidase K06194 - - 0.000000000000000000000000000000000000000000001612 176.0
BYD1_k127_10731619_6 DNA segregation ATPase FtsK SpoIIIE K03466 - - 9.263e-269 847.0
BYD1_k127_10731619_60 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000003828 173.0
BYD1_k127_10731619_61 Outer membrane lipoprotein carrier protein LolA K03634 - - 0.0000000000000000000000000000000000000000001094 173.0
BYD1_k127_10731619_62 CYTH K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000055 164.0
BYD1_k127_10731619_63 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000009552 156.0
BYD1_k127_10731619_64 Small MutS-related domain - - - 0.00000000000000000000000000000000000000008388 156.0
BYD1_k127_10731619_65 Type II secretion system protein C - - - 0.000000000000000000000000000000000000002711 159.0
BYD1_k127_10731619_66 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000001411 141.0
BYD1_k127_10731619_67 Biopolymer transport protein ExbD/TolR K03559 - - 0.00000000000000000000000000000005161 132.0
BYD1_k127_10731619_68 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000007282 128.0
BYD1_k127_10731619_69 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.00000000000000000000000000000009925 134.0
BYD1_k127_10731619_7 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.92e-253 792.0
BYD1_k127_10731619_70 Redoxin K03564 - 1.11.1.15 0.00000000000000000000000000001397 133.0
BYD1_k127_10731619_71 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000008892 109.0
BYD1_k127_10731619_72 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000006954 104.0
BYD1_k127_10731619_73 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000002938 94.0
BYD1_k127_10731619_74 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008897,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016780,GO:0018070,GO:0018193,GO:0018209,GO:0018215,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:0072330,GO:1901564,GO:1901576 2.7.8.7 0.00000000000000000001521 104.0
BYD1_k127_10731619_75 Phosphoglycerate mutase family - - - 0.0000000000000000000306 99.0
BYD1_k127_10731619_76 succinate dehydrogenase K00242 - - 0.0000000000000000001743 98.0
BYD1_k127_10731619_77 Succinate dehydrogenase, cytochrome b556 subunit K00241 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000002637 100.0
BYD1_k127_10731619_78 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000142 85.0
BYD1_k127_10731619_79 - - - - 0.000000000000002593 79.0
BYD1_k127_10731619_8 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.336e-210 680.0
BYD1_k127_10731619_80 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000002858 78.0
BYD1_k127_10731619_81 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.00000000007996 66.0
BYD1_k127_10731619_82 Sigma factor algU negative regulatory protein K03597 - - 0.000000008143 64.0
BYD1_k127_10731619_83 metal-binding, possibly nucleic acid-binding protein K07040 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000001223 60.0
BYD1_k127_10731619_84 PFAM VanZ - - - 0.0000002296 60.0
BYD1_k127_10731619_85 Domain of unknown function (DUF4845) - - - 0.0000008183 57.0
BYD1_k127_10731619_86 (Lipo)protein - - - 0.0003803 51.0
BYD1_k127_10731619_9 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 1.178e-202 645.0
BYD1_k127_10976135_0 Bacterial NAD-glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1469.0
BYD1_k127_10976135_1 MaoC like domain K02618 - 1.2.1.91,3.3.2.12 6.487e-270 853.0
BYD1_k127_10976135_10 YKOF-related Family - - - 0.000000000000001155 79.0
BYD1_k127_10976135_11 Choline ethanolamine kinase - - - 0.00000000003757 75.0
BYD1_k127_10976135_2 TonB-dependent receptor plug K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 543.0
BYD1_k127_10976135_3 Belongs to the enoyl-CoA hydratase isomerase family K07516 - 1.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 461.0
BYD1_k127_10976135_4 phosphoglycerate mutase activity K01834 GO:0003674,GO:0003824,GO:0004619,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006109,GO:0006139,GO:0006140,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009894,GO:0009987,GO:0010675,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0017144,GO:0018130,GO:0019219,GO:0019220,GO:0019222,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0031323,GO:0031329,GO:0032787,GO:0034248,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0043455,GO:0043456,GO:0043470,GO:0043471,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046538,GO:0046700,GO:0046939,GO:0050789,GO:0050794,GO:0051171,GO:0051174,GO:0051186,GO:0051188,GO:0051193,GO:0051196,GO:0055086,GO:0060255,GO:0062012,GO:0065007,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902031 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 346.0
BYD1_k127_10976135_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 356.0
BYD1_k127_10976135_6 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008847 302.0
BYD1_k127_10976135_7 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000003975 154.0
BYD1_k127_10976135_8 COG3201 Nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000000000001161 133.0
BYD1_k127_10976135_9 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000179 124.0
BYD1_k127_11031423_0 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000005241 204.0
BYD1_k127_11031423_1 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000007301 96.0
BYD1_k127_11058394_0 Lipocalin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 378.0
BYD1_k127_11058394_1 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003906 333.0
BYD1_k127_11074453_0 Heat shock 70 kDa protein K04043 - - 4.991e-312 968.0
BYD1_k127_11074453_1 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0006457,GO:0008150,GO:0009987 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009954 494.0
BYD1_k127_11074453_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000001028 107.0
BYD1_k127_11074453_11 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000121 84.0
BYD1_k127_11074453_2 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002265 468.0
BYD1_k127_11074453_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003866 401.0
BYD1_k127_11074453_4 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000006003 248.0
BYD1_k127_11074453_5 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000143 246.0
BYD1_k127_11074453_6 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000003378 228.0
BYD1_k127_11074453_7 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000006149 201.0
BYD1_k127_11074453_8 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000001482 147.0
BYD1_k127_11074453_9 oligoketide cyclase lipid transport protein - GO:0003674,GO:0005488,GO:0006417,GO:0006446,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044877,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 - 0.000000000000000000000000000000005483 139.0
BYD1_k127_11164401_0 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 305.0
BYD1_k127_11164401_1 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000009122 295.0
BYD1_k127_11164401_2 PTS fructose transporter subunit IIA K02793 - 2.7.1.191 0.0000000000000000000000000000000000000003398 153.0
BYD1_k127_11164401_3 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.0000000000000000000000000003201 121.0
BYD1_k127_11164401_4 RNA polymerase sigma-54 factor K03092 - - 0.0000000000000000000000000003636 115.0
BYD1_k127_11164401_5 Phosphotransferase System K11189 - - 0.000000000000000001727 94.0
BYD1_k127_11274824_0 PFAM Integrase catalytic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004599 574.0
BYD1_k127_11274824_1 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002202 511.0
BYD1_k127_11274824_2 PFAM IstB domain protein ATP-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 455.0
BYD1_k127_11274824_3 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000008532 93.0
BYD1_k127_11274824_4 Sap, sulfolipid-1-addressing protein - - - 0.000001164 51.0
BYD1_k127_11573419_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 1.743e-276 861.0
BYD1_k127_11573419_1 Aminotransferase K00819,K00821 GO:0003674,GO:0005488,GO:0005515,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 2.6.1.11,2.6.1.13,2.6.1.17 6.272e-214 668.0
BYD1_k127_11697411_0 Epoxide hydrolase N terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 594.0
BYD1_k127_11697411_1 FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 511.0
BYD1_k127_11697411_2 Protein of unknown function (DUF861) - - - 0.00000000000000000000000000000000000000000003885 165.0
BYD1_k127_11697411_3 Berberine and berberine like - - - 0.0000000000000000000000000000001482 129.0
BYD1_k127_11697411_4 Transcriptional regulator - - - 0.00000000000001533 76.0
BYD1_k127_11874966_0 FtsX-like permease family K02004 - - 0.0 1050.0
BYD1_k127_11874966_1 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 5.227e-279 863.0
BYD1_k127_11874966_10 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004922 332.0
BYD1_k127_11874966_11 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005469 332.0
BYD1_k127_11874966_12 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006895 339.0
BYD1_k127_11874966_13 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002594 309.0
BYD1_k127_11874966_14 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003786 299.0
BYD1_k127_11874966_15 HTH domain - - - 0.00000000000000000000000000000000000000000000000000000000002353 212.0
BYD1_k127_11874966_16 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000001405 226.0
BYD1_k127_11874966_17 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000007678 202.0
BYD1_k127_11874966_18 - - - - 0.000000000000000000000000000000000000000000000000000000008931 205.0
BYD1_k127_11874966_19 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000002181 205.0
BYD1_k127_11874966_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 GO:0003674,GO:0003678,GO:0003724,GO:0003824,GO:0004003,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006996,GO:0008026,GO:0008094,GO:0008150,GO:0008152,GO:0008186,GO:0009314,GO:0009379,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032392,GO:0032508,GO:0032991,GO:0033202,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048476,GO:0050896,GO:0051276,GO:0070035,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0140097,GO:0140098,GO:1901360,GO:1902494 3.6.4.12 3.185e-262 831.0
BYD1_k127_11874966_20 Competence protein - - - 0.0000000000000000000000000000000000000000000002069 179.0
BYD1_k127_11874966_21 PFAM Cytochrome c oxidase assembly protein CtaG Cox11 K02258 - - 0.000000000000000000000000000000000000000007237 161.0
BYD1_k127_11874966_22 PFAM Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000001075 159.0
BYD1_k127_11874966_23 Protein tyrosine kinase K08282,K11916,K12132 - 2.7.11.1 0.00000000000000000000000000000000000003352 163.0
BYD1_k127_11874966_24 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000002389 162.0
BYD1_k127_11874966_25 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.0000000000000000000003424 104.0
BYD1_k127_11874966_26 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0030880,GO:0032774,GO:0032991,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0061695,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.6 0.00000000000000000001284 95.0
BYD1_k127_11874966_27 - - - - 0.00000000000003244 76.0
BYD1_k127_11874966_28 PFAM Oxidoreductase FAD NAD(P)-binding - - - 0.000019 51.0
BYD1_k127_11874966_29 repeat-containing protein - - - 0.000525 51.0
BYD1_k127_11874966_3 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 7.969e-239 759.0
BYD1_k127_11874966_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 1.77e-203 652.0
BYD1_k127_11874966_5 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005156 460.0
BYD1_k127_11874966_6 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 432.0
BYD1_k127_11874966_7 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 392.0
BYD1_k127_11874966_8 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001175 399.0
BYD1_k127_11874966_9 Heme copper-type cytochrome quinol oxidase subunit 3 K02276 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004571 346.0
BYD1_k127_11938237_0 COG0146 N-methylhydantoinase B acetone carboxylase, alpha subunit K01474 - 3.5.2.14 8.736e-308 988.0
BYD1_k127_11938237_1 Hydantoinase/oxoprolinase N-terminal region K01473 - 3.5.2.14 2.499e-276 866.0
BYD1_k127_11938237_10 - - - - 0.0000000000000000000000000000000000000000000000001538 181.0
BYD1_k127_11938237_11 PFAM adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000003646 106.0
BYD1_k127_11938237_12 BrnA antitoxin of type II toxin-antitoxin system - - - 0.00000000001485 65.0
BYD1_k127_11938237_13 Helix-turn-helix XRE-family like proteins - - - 0.0000000005179 67.0
BYD1_k127_11938237_14 Periplasmic or secreted lipoprotein - - - 0.0000003493 61.0
BYD1_k127_11938237_2 Outer membrane receptor K02014 - - 7.905e-239 767.0
BYD1_k127_11938237_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 3.956e-206 650.0
BYD1_k127_11938237_4 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000824 555.0
BYD1_k127_11938237_5 CoA-transferase family III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 498.0
BYD1_k127_11938237_6 Isochorismatase family K13995 - 3.5.1.107 0.00000000000000000000000000000000000000000000000000000000000000000006071 237.0
BYD1_k127_11938237_7 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000001324 231.0
BYD1_k127_11938237_8 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000248 197.0
BYD1_k127_11938237_9 FCD - - - 0.000000000000000000000000000000000000000000000000002482 188.0
BYD1_k127_12011917_0 Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 398.0
BYD1_k127_12011917_1 Di-iron-containing protein involved in the repair of iron-sulfur clusters K07322 - - 0.00000000000000000000004217 99.0
BYD1_k127_12027283_0 Belongs to the GcvT family K00315,K19191 - 1.5.3.19,1.5.8.4 0.0 1370.0
BYD1_k127_12027283_1 2Fe-2S iron-sulfur cluster binding domain K00302,K22086 - 1.5.3.1,1.5.99.5 0.0 1280.0
BYD1_k127_12027283_10 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.072e-220 705.0
BYD1_k127_12027283_11 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid K00130 - 1.2.1.8 5.168e-219 688.0
BYD1_k127_12027283_12 PFAM peptidase M2, peptidyl-dipeptidase A K01283 - 3.4.15.1 1.688e-216 712.0
BYD1_k127_12027283_13 Major Facilitator Superfamily K02445,K07783 - - 1.281e-203 662.0
BYD1_k127_12027283_14 Nucleoside K03289,K11537 - - 5.816e-196 618.0
BYD1_k127_12027283_15 COG3104 Dipeptide tripeptide permease K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000135 615.0
BYD1_k127_12027283_16 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009532 610.0
BYD1_k127_12027283_17 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 601.0
BYD1_k127_12027283_18 ABC-type proline glycine betaine transport systems periplasmic components K02002 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002991 559.0
BYD1_k127_12027283_19 response regulator K07712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 538.0
BYD1_k127_12027283_2 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0007059,GO:0008094,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009295,GO:0009330,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032991,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0042221,GO:0042493,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097367,GO:0097659,GO:0140097,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1075.0
BYD1_k127_12027283_20 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 503.0
BYD1_k127_12027283_21 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 510.0
BYD1_k127_12027283_22 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002898 469.0
BYD1_k127_12027283_23 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 483.0
BYD1_k127_12027283_24 COG3540 Phosphodiesterase alkaline phosphatase D K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 449.0
BYD1_k127_12027283_25 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 414.0
BYD1_k127_12027283_26 ATPases associated with a variety of cellular activities K02000 GO:0000166,GO:0003674,GO:0004888,GO:0005034,GO:0005215,GO:0005275,GO:0005488,GO:0005524,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006950,GO:0006970,GO:0006972,GO:0007154,GO:0007165,GO:0008144,GO:0008150,GO:0009628,GO:0009987,GO:0015695,GO:0015696,GO:0015697,GO:0015837,GO:0015838,GO:0016020,GO:0016021,GO:0017076,GO:0022857,GO:0023052,GO:0030554,GO:0031224,GO:0031460,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0036094,GO:0038023,GO:0043167,GO:0043168,GO:0043190,GO:0044425,GO:0044459,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0055085,GO:0060089,GO:0065007,GO:0071702,GO:0071705,GO:0071944,GO:0072337,GO:0097159,GO:0097367,GO:0098533,GO:0098796,GO:0098797,GO:1901265,GO:1901363,GO:1902494,GO:1902495,GO:1904949,GO:1990351 3.6.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005679 413.0
BYD1_k127_12027283_27 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 382.0
BYD1_k127_12027283_28 PAS fold K02484 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 383.0
BYD1_k127_12027283_29 Glycerol-3-phosphate dehydrogenase K00057 GO:0003674,GO:0003824,GO:0004367,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006072,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 354.0
BYD1_k127_12027283_3 GMC oxidoreductase K00108 - 1.1.99.1 1.552e-279 867.0
BYD1_k127_12027283_30 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 362.0
BYD1_k127_12027283_31 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 353.0
BYD1_k127_12027283_32 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 345.0
BYD1_k127_12027283_33 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 329.0
BYD1_k127_12027283_34 COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004553 341.0
BYD1_k127_12027283_35 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 315.0
BYD1_k127_12027283_36 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001339 335.0
BYD1_k127_12027283_37 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 308.0
BYD1_k127_12027283_38 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 297.0
BYD1_k127_12027283_39 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000254 289.0
BYD1_k127_12027283_4 trimethylamine methyltransferase K14083 - 2.1.1.250 1.982e-274 857.0
BYD1_k127_12027283_40 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006418 298.0
BYD1_k127_12027283_41 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002224 282.0
BYD1_k127_12027283_42 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000001828 269.0
BYD1_k127_12027283_43 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002821 251.0
BYD1_k127_12027283_44 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000004866 241.0
BYD1_k127_12027283_45 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009432,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0018130,GO:0019438,GO:0031668,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071496,GO:0071704,GO:0071897,GO:0090304,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000283 239.0
BYD1_k127_12027283_46 COG4942 Membrane-bound metallopeptidase - GO:0000920,GO:0001896,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008219,GO:0009273,GO:0009314,GO:0009628,GO:0009987,GO:0012501,GO:0016020,GO:0016787,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0042221,GO:0042493,GO:0042546,GO:0042597,GO:0043085,GO:0044085,GO:0044093,GO:0044464,GO:0050790,GO:0050896,GO:0051301,GO:0051336,GO:0051345,GO:0065007,GO:0065009,GO:0071554,GO:0071840,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000009097 231.0
BYD1_k127_12027283_47 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000001097 219.0
BYD1_k127_12027283_48 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000007451 192.0
BYD1_k127_12027283_49 TIGRFAM DJ-1 family protein K03152 - 3.5.1.124 0.00000000000000000000000000000000000000000000000022 197.0
BYD1_k127_12027283_5 COG0457 FOG TPR repeat - - - 3.023e-255 824.0
BYD1_k127_12027283_50 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000005757 184.0
BYD1_k127_12027283_51 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000002193 180.0
BYD1_k127_12027283_52 Major Facilitator Superfamily K07783 - - 0.000000000000000000000000000000000000000000007106 184.0
BYD1_k127_12027283_53 Protein of unknown function (DUF3313) - - - 0.00000000000000000000000000000000000000002192 162.0
BYD1_k127_12027283_54 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.000000000000000000000000000000000000002137 149.0
BYD1_k127_12027283_55 - - - - 0.0000000000000000000000000000000000000843 151.0
BYD1_k127_12027283_56 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.0000000000000000000000000000000000001709 151.0
BYD1_k127_12027283_57 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.0000000000000000000000000000000000009591 144.0
BYD1_k127_12027283_58 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000009925 157.0
BYD1_k127_12027283_59 PFAM Membrane protein of K08972 - - 0.000000000000000000000000000008425 123.0
BYD1_k127_12027283_6 TIGRFAM glutamine synthetase, type I K01915 - 6.3.1.2 1.043e-247 771.0
BYD1_k127_12027283_60 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000000002788 121.0
BYD1_k127_12027283_61 Sulfurtransferase - - - 0.00000000000000000000000008409 112.0
BYD1_k127_12027283_62 Type IV pilus biogenesis stability protein PilW - - - 0.000000000000000000001118 97.0
BYD1_k127_12027283_63 hydrolase - - - 0.00000000000000000002141 102.0
BYD1_k127_12027283_64 Domain of unknown function (DUF4124) - - - 0.0000000000000000001133 97.0
BYD1_k127_12027283_65 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0015035,GO:0015036,GO:0016491,GO:0016667,GO:0033218,GO:0042277,GO:0043167,GO:0043168,GO:0043295,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0055114,GO:0072341,GO:1900750,GO:1901681 - 0.000000000000000002267 91.0
BYD1_k127_12027283_66 Belongs to the bacterial ribosomal protein bL34 family K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000007268 72.0
BYD1_k127_12027283_67 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.00000000000007911 78.0
BYD1_k127_12027283_68 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000007499 69.0
BYD1_k127_12027283_69 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000004185 66.0
BYD1_k127_12027283_7 Outer membrane receptor - - - 3.941e-242 773.0
BYD1_k127_12027283_70 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00005664 53.0
BYD1_k127_12027283_8 transporter - - - 2.321e-235 746.0
BYD1_k127_12027283_9 sarcosine oxidase, beta subunit K00303 - 1.5.3.1 8.454e-228 714.0
BYD1_k127_1262890_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1270.0
BYD1_k127_1262890_1 dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes - - - 8.711e-272 850.0
BYD1_k127_1262890_10 Protein of unknown function (DUF1298) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 451.0
BYD1_k127_1262890_11 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00826 - 2.6.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007604 440.0
BYD1_k127_1262890_12 Transglutaminase/protease-like homologues K22452 - 2.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 450.0
BYD1_k127_1262890_13 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 437.0
BYD1_k127_1262890_14 N-acetylmuramoyl-L-alanine amidase K01448 GO:0000003,GO:0000910,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0007049,GO:0008150,GO:0008745,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0019954,GO:0022402,GO:0022414,GO:0030288,GO:0030313,GO:0031975,GO:0032505,GO:0042597,GO:0043093,GO:0044464,GO:0051301,GO:0061783 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 398.0
BYD1_k127_1262890_15 associated with various cellular activities K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003423 376.0
BYD1_k127_1262890_16 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 362.0
BYD1_k127_1262890_17 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002233 339.0
BYD1_k127_1262890_18 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 318.0
BYD1_k127_1262890_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003241 305.0
BYD1_k127_1262890_2 Cytochrome c - - - 2.466e-194 615.0
BYD1_k127_1262890_20 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001679 269.0
BYD1_k127_1262890_21 HflC and HflK could regulate a protease K04087 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0009266,GO:0009408,GO:0009628,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0031224,GO:0031226,GO:0031233,GO:0032991,GO:0043086,GO:0043170,GO:0044092,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050790,GO:0050896,GO:0065007,GO:0065009,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0098796,GO:0140096,GO:1901564 - 0.000000000000000000000000000000000000000000000000000000000000000000000000002085 269.0
BYD1_k127_1262890_22 COG1428 Deoxynucleoside kinases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009701 254.0
BYD1_k127_1262890_23 permease K07091 - - 0.000000000000000000000000000000000000000000000000000000000000003412 231.0
BYD1_k127_1262890_24 Protein of unknown function DUF58 - - - 0.00000000000000000000000000000000000000000000000000000000000001263 228.0
BYD1_k127_1262890_25 PFAM acid phosphatase (Class B) - - - 0.0000000000000000000000000000000000000000000000000000004551 213.0
BYD1_k127_1262890_26 Permease YjgP YjgQ K11720 - - 0.00000000000000000000000000000000000000000000000000005905 211.0
BYD1_k127_1262890_27 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000003353 171.0
BYD1_k127_1262890_28 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000001563 139.0
BYD1_k127_1262890_29 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.0000000000000000000000000004497 119.0
BYD1_k127_1262890_3 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003747 577.0
BYD1_k127_1262890_30 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000006854 130.0
BYD1_k127_1262890_31 - - - - 0.000000000000000000000001224 107.0
BYD1_k127_1262890_32 Poly(hydroxyalcanoate) granule associated protein - - - 0.00000000000000000000005115 106.0
BYD1_k127_1262890_33 pfam rdd - - - 0.00000000000000001544 90.0
BYD1_k127_1262890_34 - - - - 0.00000000000004151 75.0
BYD1_k127_1262890_35 Uncharacterized protein conserved in bacteria (DUF2065) K09937 - - 0.0000000001269 64.0
BYD1_k127_1262890_4 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046033,GO:0046040,GO:0046085,GO:0046086,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 538.0
BYD1_k127_1262890_5 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004857 499.0
BYD1_k127_1262890_6 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 474.0
BYD1_k127_1262890_7 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 475.0
BYD1_k127_1262890_8 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 465.0
BYD1_k127_1262890_9 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 457.0
BYD1_k127_1421549_0 Prolyl oligopeptidase family - - - 1.452e-201 649.0
BYD1_k127_1421549_1 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 401.0
BYD1_k127_1421549_2 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 357.0
BYD1_k127_1421549_3 NAD(P)H-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006296 247.0
BYD1_k127_1421549_4 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 0.00000000000000000000000000000000000000000000000000000000002378 213.0
BYD1_k127_1421549_5 COG1192 ATPases involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000013 142.0
BYD1_k127_1467372_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1518.0
BYD1_k127_1467372_1 WD40-like Beta Propeller Repeat - - - 2.158e-269 851.0
BYD1_k127_1467372_10 6-O-methylguanine DNA methyltransferase, DNA binding domain K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000000000000005164 262.0
BYD1_k127_1467372_11 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000002869 169.0
BYD1_k127_1467372_12 PFAM ADP-ribosylation Crystallin J1 K05521 - 3.2.2.24 0.0000000000000000000000000000000000000000002076 178.0
BYD1_k127_1467372_13 synthesis repressor, PhaR - - - 0.00000000000000000000000000000000000000494 151.0
BYD1_k127_1467372_14 PadR family transcriptional regulator K10947 - - 0.000000000000000000000000000000001131 134.0
BYD1_k127_1467372_15 Dual specificity phosphatase, catalytic domain - - - 0.00000000000000000000000000004642 134.0
BYD1_k127_1467372_16 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000001392 128.0
BYD1_k127_1467372_17 SMART Water Stress and Hypersensitive response - - - 0.000000000000000000007915 98.0
BYD1_k127_1467372_2 TonB dependent receptor - - - 9.198e-226 717.0
BYD1_k127_1467372_3 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 442.0
BYD1_k127_1467372_4 alpha/beta hydrolase fold K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 407.0
BYD1_k127_1467372_5 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009391 386.0
BYD1_k127_1467372_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 384.0
BYD1_k127_1467372_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 371.0
BYD1_k127_1467372_8 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 354.0
BYD1_k127_1467372_9 Putative sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 306.0
BYD1_k127_1468573_0 DNA ligase K01971 - 6.5.1.1 0.0 1052.0
BYD1_k127_1468573_1 protein conserved in bacteria K09955 - - 1.339e-301 947.0
BYD1_k127_1468573_10 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006282 412.0
BYD1_k127_1468573_11 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0042579,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009284 401.0
BYD1_k127_1468573_12 Serine hydrolase involved in the detoxification of formaldehyde K01070,K09795 - 3.1.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 401.0
BYD1_k127_1468573_13 Electron transfer flavoprotein K03522 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002752 400.0
BYD1_k127_1468573_14 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006785 369.0
BYD1_k127_1468573_15 PFAM aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005083 358.0
BYD1_k127_1468573_16 electron transfer flavoprotein beta subunit K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 338.0
BYD1_k127_1468573_17 transporter, permease K02033,K15581 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 342.0
BYD1_k127_1468573_18 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004237 356.0
BYD1_k127_1468573_19 N-terminal TM domain of oligopeptide transport permease C K02034,K15582 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006242 323.0
BYD1_k127_1468573_2 Catalyzes the NAD( )-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non- methylotrophic organisms K00122 - 1.17.1.9 4.082e-225 702.0
BYD1_k127_1468573_20 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 303.0
BYD1_k127_1468573_21 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 306.0
BYD1_k127_1468573_22 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003456 295.0
BYD1_k127_1468573_23 ABC-type transport system, involved in lipoprotein release, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004707 297.0
BYD1_k127_1468573_24 Glutathione-dependent formaldehyde-activating enzyme K03396 - 4.4.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002764 301.0
BYD1_k127_1468573_25 PFAM ABC transporter related K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001197 265.0
BYD1_k127_1468573_26 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003439 264.0
BYD1_k127_1468573_27 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002201 270.0
BYD1_k127_1468573_28 bacteriocin transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000001367 243.0
BYD1_k127_1468573_29 EamA-like transporter family K15268 - - 0.0000000000000000000000000000000000000000000000000000000000000001483 238.0
BYD1_k127_1468573_3 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 9.603e-220 724.0
BYD1_k127_1468573_31 Peroxiredoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000596 211.0
BYD1_k127_1468573_32 Hemerythrin - - - 0.0000000000000000000000000000000000000000001683 164.0
BYD1_k127_1468573_33 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.00000000000000000000000000000000000003386 147.0
BYD1_k127_1468573_34 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000009874 111.0
BYD1_k127_1468573_35 relative of glutathione S-transferase, MAPEG superfamily K07136 - - 0.00000000000000000005419 100.0
BYD1_k127_1468573_36 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000003057 98.0
BYD1_k127_1468573_37 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000005255 93.0
BYD1_k127_1468573_38 UvrD-like helicase C-terminal domain - - - 0.0001268 44.0
BYD1_k127_1468573_4 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 1.216e-207 649.0
BYD1_k127_1468573_5 acyl-CoA dehydrogenase K00248 - 1.3.8.1 2.741e-202 649.0
BYD1_k127_1468573_6 belongs to the aldehyde dehydrogenase family K00128,K00154 - 1.2.1.3,1.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000613 514.0
BYD1_k127_1468573_7 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 504.0
BYD1_k127_1468573_8 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003556 501.0
BYD1_k127_1468573_9 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 475.0
BYD1_k127_148924_0 Di-haem cytochrome c peroxidase - - - 8.522e-311 964.0
BYD1_k127_148924_1 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004697 627.0
BYD1_k127_148924_2 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 514.0
BYD1_k127_148924_3 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 421.0
BYD1_k127_148924_4 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000002772 187.0
BYD1_k127_148924_5 Conserved hypothetical protein 698 - - - 0.0000000000000000000000000000000000000004133 169.0
BYD1_k127_148924_6 E-Z type HEAT repeats - - - 0.00000000000000000000000000000000005137 147.0
BYD1_k127_148924_7 - - - - 0.0000000000001004 77.0
BYD1_k127_148924_8 Peptidase family M3 - - - 0.000007422 59.0
BYD1_k127_1497030_0 Belongs to the GcvT family K00302 - 1.5.3.1 1.973e-244 805.0
BYD1_k127_1497030_1 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 529.0
BYD1_k127_1497030_2 FAD dependent oxidoreductase K00303 - 1.5.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 470.0
BYD1_k127_1497030_3 Zn_pept - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 413.0
BYD1_k127_1497030_4 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 358.0
BYD1_k127_1497030_5 MASE1 - - - 0.00000000000000000000000000000000000000000000000000265 201.0
BYD1_k127_1497030_6 Sarcosine oxidase K00304 - 1.5.3.1 0.0000000000000000000000000000000000007334 140.0
BYD1_k127_1497030_7 - - - - 0.0000000000000000000001645 98.0
BYD1_k127_1497030_8 Diguanylate cyclase - - - 0.000000000000000000000868 110.0
BYD1_k127_1497030_9 Sarcosine oxidase, gamma subunit family K00305 - 1.5.3.1 0.000000000194 70.0
BYD1_k127_1531931_0 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004121 483.0
BYD1_k127_1531931_1 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 475.0
BYD1_k127_1960792_0 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000495 473.0
BYD1_k127_1960792_1 peptidyl-tyrosine sulfation K01277 - 3.4.14.4 0.0000000000000000000000000000000000000000000000000000003246 196.0
BYD1_k127_1960792_2 Catalyzes a cyclopropane ring-opening reaction, the irreversible conversion of 1-aminocyclopropane-1-carboxylate (ACC) to ammonia and alpha-ketobutyrate. Allows growth on ACC as a nitrogen source K05396,K17950 GO:0000096,GO:0000098,GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006520,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016829,GO:0016846,GO:0019752,GO:0019842,GO:0030170,GO:0034011,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044273,GO:0044281,GO:0044282,GO:0046395,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901565,GO:1901575 4.4.1.15,4.4.1.25 0.00000000000000000000002291 102.0
BYD1_k127_2093507_0 B12 binding domain K00548 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006464,GO:0006479,GO:0006520,GO:0006555,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0008213,GO:0008270,GO:0008276,GO:0008652,GO:0008705,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0019538,GO:0019752,GO:0019842,GO:0031419,GO:0032259,GO:0034641,GO:0035999,GO:0036094,GO:0036211,GO:0042084,GO:0042558,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0043436,GO:0043603,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050667,GO:0051186,GO:0071704,GO:0097159,GO:0140096,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.1.13 0.0 1584.0
BYD1_k127_2093507_1 Domain of unknown function (DUF4445) - - - 9.049e-279 872.0
BYD1_k127_2093507_10 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 605.0
BYD1_k127_2093507_11 Trimethylamine methyltransferase (MTTB) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001815 589.0
BYD1_k127_2093507_12 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823,K00836,K07250 - 2.6.1.19,2.6.1.22,2.6.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000783 567.0
BYD1_k127_2093507_13 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 571.0
BYD1_k127_2093507_14 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000446 559.0
BYD1_k127_2093507_15 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000482 522.0
BYD1_k127_2093507_16 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 465.0
BYD1_k127_2093507_17 COG1410 Methionine synthase I cobalamin-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002843 445.0
BYD1_k127_2093507_18 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007898 445.0
BYD1_k127_2093507_19 Carbon-nitrogen hydrolase K12251 - 3.5.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 425.0
BYD1_k127_2093507_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 8.676e-249 790.0
BYD1_k127_2093507_20 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005399 430.0
BYD1_k127_2093507_21 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 407.0
BYD1_k127_2093507_22 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002611 389.0
BYD1_k127_2093507_23 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 387.0
BYD1_k127_2093507_24 B12 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 353.0
BYD1_k127_2093507_25 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008795 311.0
BYD1_k127_2093507_26 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002513 286.0
BYD1_k127_2093507_27 COG2951 Membrane-bound lytic murein transglycosylase B K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007943 298.0
BYD1_k127_2093507_28 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000003549 261.0
BYD1_k127_2093507_29 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000164 251.0
BYD1_k127_2093507_3 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 6.97e-236 759.0
BYD1_k127_2093507_30 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000005418 247.0
BYD1_k127_2093507_31 protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000000000000000009633 245.0
BYD1_k127_2093507_32 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000001062 238.0
BYD1_k127_2093507_33 Cupin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001383 238.0
BYD1_k127_2093507_34 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000001417 241.0
BYD1_k127_2093507_35 Protein of unknown function (DUF1638) - - - 0.0000000000000000000000000000000000000000000000000000000000000006025 225.0
BYD1_k127_2093507_36 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000007498 214.0
BYD1_k127_2093507_37 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000003084 212.0
BYD1_k127_2093507_38 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000003882 200.0
BYD1_k127_2093507_39 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000002505 211.0
BYD1_k127_2093507_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 3.212e-234 735.0
BYD1_k127_2093507_40 Repressor involved in choline regulation of the bet genes K02167 - - 0.0000000000000000000000000000000000000000000000000001533 199.0
BYD1_k127_2093507_41 - - - - 0.00000000000000000000000000000001668 128.0
BYD1_k127_2093507_42 Protein of unknown function (DUF861) - - - 0.0000000000000000000000000000001381 132.0
BYD1_k127_2093507_43 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000002494 115.0
BYD1_k127_2093507_44 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.00000000000000000000000004096 117.0
BYD1_k127_2093507_45 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000924 106.0
BYD1_k127_2093507_46 - - - - 0.00000000000000000000000769 104.0
BYD1_k127_2093507_47 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.000000000000000000002348 109.0
BYD1_k127_2093507_48 Virulence factor - - - 0.0000000000000000000104 101.0
BYD1_k127_2093507_5 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 3.039e-226 739.0
BYD1_k127_2093507_6 belongs to the aldehyde dehydrogenase family K09472,K12254 - 1.2.1.54,1.2.1.99 1.044e-218 690.0
BYD1_k127_2093507_7 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.427e-215 679.0
BYD1_k127_2093507_8 trimethylamine methyltransferase K14083 - 2.1.1.250 4.41e-208 658.0
BYD1_k127_2093507_9 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 6.844e-204 642.0
BYD1_k127_2142915_0 peptidase K01354 - 3.4.21.83 3.087e-290 907.0
BYD1_k127_2142915_1 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA K06445 - - 8.967e-274 865.0
BYD1_k127_2142915_10 Protein of unknown function (DUF1282) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 358.0
BYD1_k127_2142915_11 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 359.0
BYD1_k127_2142915_12 Major Facilitator Superfamily K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 347.0
BYD1_k127_2142915_13 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 309.0
BYD1_k127_2142915_14 Flavin containing amine oxidoreductase K06955 - - 0.00000000000000000000000000000000000000000000000000000000000000001251 240.0
BYD1_k127_2142915_16 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000000000000000000000000007776 172.0
BYD1_k127_2142915_17 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000257 183.0
BYD1_k127_2142915_18 - K01992 - - 0.0000000000000000000000000000000000000000003127 172.0
BYD1_k127_2142915_19 Histidine kinase - - - 0.00000000000000000000000000000000000000003584 167.0
BYD1_k127_2142915_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 7.428e-272 863.0
BYD1_k127_2142915_20 - - - - 0.00000000000000000000000000000000000000005353 158.0
BYD1_k127_2142915_21 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000001898 154.0
BYD1_k127_2142915_22 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000971 153.0
BYD1_k127_2142915_23 Protein of Unknown function (DUF2784) - - - 0.0000000000000000000000000000000000000106 155.0
BYD1_k127_2142915_24 Protein of unknown function (DUF3667) - - - 0.000000000000000000000000000000000005858 152.0
BYD1_k127_2142915_25 response regulator K07689 - - 0.000000000000000000000000000000001051 134.0
BYD1_k127_2142915_26 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000004434 131.0
BYD1_k127_2142915_27 - - - - 0.000000000000000000000000000000009914 135.0
BYD1_k127_2142915_28 - - - - 0.0000000000000000000000008172 109.0
BYD1_k127_2142915_29 Rhodanese Homology Domain K03972 GO:0003674,GO:0003824,GO:0004792,GO:0005575,GO:0005623,GO:0016740,GO:0016782,GO:0016783,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464 - 0.00000000000000000000005177 102.0
BYD1_k127_2142915_3 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 1.995e-264 827.0
BYD1_k127_2142915_30 Dodecin K09165 - - 0.00000000000000000004297 91.0
BYD1_k127_2142915_31 Type II secretion system protein B - - - 0.0000000000000000006832 96.0
BYD1_k127_2142915_32 Putative adhesin - - - 0.000000000000000003342 99.0
BYD1_k127_2142915_33 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000000006668 96.0
BYD1_k127_2142915_34 Maltose operon periplasmic protein precursor (MalM) K05775 - - 0.00000000007954 71.0
BYD1_k127_2142915_35 Domain of unknown function (DUF4286) - - - 0.000000001416 70.0
BYD1_k127_2142915_36 Las17-binding protein actin regulator - - - 0.0001609 47.0
BYD1_k127_2142915_37 - - - - 0.0004634 50.0
BYD1_k127_2142915_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003294 464.0
BYD1_k127_2142915_5 Dak2 K07030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008829 447.0
BYD1_k127_2142915_6 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 437.0
BYD1_k127_2142915_7 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000559 420.0
BYD1_k127_2142915_8 COG0665 Glycine D-amino acid oxidases (deaminating) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 409.0
BYD1_k127_2142915_9 abc transporter atp-binding protein K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000369 380.0
BYD1_k127_2216199_0 DNA polymerase X family K02347 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 393.0
BYD1_k127_2216199_1 - - - - 0.000000000000000000008718 102.0
BYD1_k127_2216199_2 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000002119 53.0
BYD1_k127_2450524_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 4.301e-253 809.0
BYD1_k127_2450524_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 2.426e-209 659.0
BYD1_k127_2450524_10 Polysaccharide pyruvyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000006996 218.0
BYD1_k127_2450524_11 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000609 184.0
BYD1_k127_2450524_12 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000443 149.0
BYD1_k127_2450524_13 Toxic component of a toxin-antitoxin (TA) module. An RNase - - - 0.0000000000000000000000003681 109.0
BYD1_k127_2450524_14 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000000000807 79.0
BYD1_k127_2450524_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 3.848e-199 630.0
BYD1_k127_2450524_3 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 602.0
BYD1_k127_2450524_4 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01840,K15778 - 5.4.2.2,5.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 588.0
BYD1_k127_2450524_5 COG0471 Di- and tricarboxylate transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 589.0
BYD1_k127_2450524_6 nucleoside-diphosphate sugar epimerases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004179 581.0
BYD1_k127_2450524_7 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004779,GO:0004781,GO:0006082,GO:0006520,GO:0006534,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019344,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0070566,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002188 465.0
BYD1_k127_2450524_8 aromatic amino acid beta-eliminating lyase threonine aldolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 437.0
BYD1_k127_2450524_9 transferase activity, transferring glycosyl groups K00754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 301.0
BYD1_k127_2501184_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008222 366.0
BYD1_k127_2501184_1 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.00000000000000000000000000004257 119.0
BYD1_k127_2501184_2 Cold shock K03704 - - 0.00000000000000000000000001524 110.0
BYD1_k127_2501184_3 - - - - 0.000007971 50.0
BYD1_k127_2531270_0 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 381.0
BYD1_k127_2531270_1 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001343 264.0
BYD1_k127_2531270_2 WYL domain - - - 0.000000000000000001759 87.0
BYD1_k127_2531270_3 Protein of unknown function (DUF952) - - - 0.00000000001345 66.0
BYD1_k127_2599438_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1109.0
BYD1_k127_2599438_1 TonB dependent receptor K02014 - - 1.283e-304 968.0
BYD1_k127_2599438_10 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000869 373.0
BYD1_k127_2599438_11 Aspartyl/Asparaginyl beta-hydroxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001856 346.0
BYD1_k127_2599438_12 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 334.0
BYD1_k127_2599438_13 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 319.0
BYD1_k127_2599438_14 pfam mofrl K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003393 310.0
BYD1_k127_2599438_15 FimV C-terminal K08086 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004027 323.0
BYD1_k127_2599438_16 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 291.0
BYD1_k127_2599438_17 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000009807 273.0
BYD1_k127_2599438_18 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000001358 264.0
BYD1_k127_2599438_19 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000004855 228.0
BYD1_k127_2599438_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 1.359e-217 685.0
BYD1_k127_2599438_20 serine threonine protein kinase K11912,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000006172 229.0
BYD1_k127_2599438_21 COG1956 GAF domain-containing protein K08968 - 1.8.4.14 0.000000000000000000000000000000000000000000000000003818 185.0
BYD1_k127_2599438_22 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767 - 5.2.1.8 0.00000000000000000000000000000000000000000000007377 176.0
BYD1_k127_2599438_23 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000000000000000238 156.0
BYD1_k127_2599438_24 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000169 154.0
BYD1_k127_2599438_25 membrane K08995 - - 0.000000000000000000000816 102.0
BYD1_k127_2599438_26 Colicin V production protein K03558 - - 0.000000000000000000004185 104.0
BYD1_k127_2599438_27 Sporulation related domain K03749 - - 0.0000000000000005473 85.0
BYD1_k127_2599438_28 - - - - 0.000003396 49.0
BYD1_k127_2599438_29 - - - - 0.000006587 48.0
BYD1_k127_2599438_3 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 5.037e-214 672.0
BYD1_k127_2599438_30 - - - - 0.000008741 49.0
BYD1_k127_2599438_31 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0007154,GO:0008150,GO:0009267,GO:0009605,GO:0009987,GO:0009991,GO:0016020,GO:0030312,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0042221,GO:0042594,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716,GO:0071496,GO:0071944 - 0.00001955 52.0
BYD1_k127_2599438_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 605.0
BYD1_k127_2599438_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 512.0
BYD1_k127_2599438_6 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 468.0
BYD1_k127_2599438_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002315 418.0
BYD1_k127_2599438_8 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 385.0
BYD1_k127_2599438_9 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 384.0
BYD1_k127_262096_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 2.201e-251 798.0
BYD1_k127_262096_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 461.0
BYD1_k127_262096_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0000049,GO:0001731,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006417,GO:0006446,GO:0006518,GO:0006807,GO:0006950,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009409,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0022411,GO:0022607,GO:0022613,GO:0022618,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031334,GO:0032268,GO:0032270,GO:0032790,GO:0032984,GO:0032988,GO:0032991,GO:0034248,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043254,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045727,GO:0045948,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065003,GO:0065007,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:1901193,GO:1901195,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008,GO:1904688,GO:1904690,GO:1990856,GO:1990904,GO:2000112,GO:2000765,GO:2000767 - 0.00000000000000000000000000000000000000000000000000000001971 203.0
BYD1_k127_262096_3 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000000000001213 196.0
BYD1_k127_262096_4 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000002838 175.0
BYD1_k127_262096_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000001923 163.0
BYD1_k127_262096_6 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.000000000000001295 78.0
BYD1_k127_262096_7 dehydrogenase - - - 0.000001657 51.0
BYD1_k127_280620_0 small GTP-binding protein K02355 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003644 363.0
BYD1_k127_280620_1 COG0784 FOG CheY-like receiver - - - 0.0000000000000000000000000000000000000002439 168.0
BYD1_k127_2854948_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 549.0
BYD1_k127_2854948_1 PFAM peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 364.0
BYD1_k127_2854948_2 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000000000000000000000000000000000000000000005291 197.0
BYD1_k127_2854948_3 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000007076 185.0
BYD1_k127_2854948_4 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000002783 180.0
BYD1_k127_2854948_5 - - - - 0.0000000002552 70.0
BYD1_k127_2950488_0 protein kinase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 499.0
BYD1_k127_2950488_1 protein kinase activity - - - 0.000000000000000000000000000000000000000005609 159.0
BYD1_k127_337207_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 1.245e-313 970.0
BYD1_k127_337207_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 2.821e-264 850.0
BYD1_k127_337207_10 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 321.0
BYD1_k127_337207_11 Alginate export - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000515 317.0
BYD1_k127_337207_12 permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001573 277.0
BYD1_k127_337207_13 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000001083 229.0
BYD1_k127_337207_14 phosphoribosyltransferase K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000597 191.0
BYD1_k127_337207_15 PFAM histidine triad (HIT) protein K02503 - - 0.00000000000000000000000000000000000000000003412 171.0
BYD1_k127_337207_16 SURF1-like protein - - - 0.00000000000000000000000000000000000000006295 164.0
BYD1_k127_337207_17 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000009196 171.0
BYD1_k127_337207_18 signal sequence binding - - - 0.000000000000000000000000001594 126.0
BYD1_k127_337207_19 Protein of unknown function (DUF2909) - - - 0.0000001368 61.0
BYD1_k127_337207_2 TrkA-N domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000378 564.0
BYD1_k127_337207_20 Tetratricopeptide repeat - - - 0.0000015 51.0
BYD1_k127_337207_3 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002269 564.0
BYD1_k127_337207_4 COG0471 Di- and tricarboxylate transporters - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001727 501.0
BYD1_k127_337207_5 MMPL family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 454.0
BYD1_k127_337207_6 Zinc-binding dehydrogenase K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001559 407.0
BYD1_k127_337207_7 Mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 376.0
BYD1_k127_337207_8 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000746 345.0
BYD1_k127_337207_9 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004491 339.0
BYD1_k127_3434549_0 formate-tetrahydrofolate ligase activity K01938 - 6.3.4.3 1.657e-273 853.0
BYD1_k127_3434549_1 Isocitrate dehydrogenase - - - 6.812e-217 678.0
BYD1_k127_3434549_10 glutamine synthetase K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009148 456.0
BYD1_k127_3434549_11 Aminotransferase K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009521 445.0
BYD1_k127_3434549_12 Required for the activity of the bacterial periplasmic transport system of putrescine K11069,K11073 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009881 422.0
BYD1_k127_3434549_13 e3 binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 419.0
BYD1_k127_3434549_14 Zinc-binding dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 407.0
BYD1_k127_3434549_15 Binding-protein-dependent transport system inner membrane component K11071,K11075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 413.0
BYD1_k127_3434549_16 COG1177 ABC-type spermidine putrescine transport system, permease component II K11074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 379.0
BYD1_k127_3434549_17 COG2230 Cyclopropane fatty acid synthase and related methyltransferases K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006779 350.0
BYD1_k127_3434549_18 Amino-transferase class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 345.0
BYD1_k127_3434549_19 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005471 311.0
BYD1_k127_3434549_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 1.828e-204 645.0
BYD1_k127_3434549_20 Peptidase C26 K07010 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 295.0
BYD1_k127_3434549_21 Methionine gamma-lyase K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 298.0
BYD1_k127_3434549_22 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000004053 245.0
BYD1_k127_3434549_23 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000001322 194.0
BYD1_k127_3434549_24 helix_turn_helix ASNC type K05800 - - 0.0000000000000000000000000000000000000000001226 164.0
BYD1_k127_3434549_25 - - - - 0.00000000000000000000000000000000000004779 148.0
BYD1_k127_3434549_26 Putative inner membrane exporter, YdcZ K09936 - - 0.0000000000000000000000000000001377 128.0
BYD1_k127_3434549_27 Repressor involved in choline regulation of the bet genes K02167 - - 0.00000000001712 65.0
BYD1_k127_3434549_3 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 5.774e-197 631.0
BYD1_k127_3434549_4 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 GO:0000166,GO:0003674,GO:0003824,GO:0004672,GO:0004721,GO:0005488,GO:0005524,GO:0006464,GO:0006468,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008772,GO:0009987,GO:0016208,GO:0016301,GO:0016310,GO:0016311,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0016791,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019538,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0036211,GO:0042578,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050790,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564 2.7.11.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003333 554.0
BYD1_k127_3434549_5 COG0022 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009836 533.0
BYD1_k127_3434549_6 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 518.0
BYD1_k127_3434549_7 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 512.0
BYD1_k127_3434549_8 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008742 496.0
BYD1_k127_3434549_9 oxidoreductase K09471 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0016491,GO:0044424,GO:0044464,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 465.0
BYD1_k127_3716488_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 1.295e-285 900.0
BYD1_k127_3716488_1 signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000374 572.0
BYD1_k127_3716488_10 Lysin motif - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 306.0
BYD1_k127_3716488_11 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001215 282.0
BYD1_k127_3716488_12 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005317 271.0
BYD1_k127_3716488_13 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000003338 269.0
BYD1_k127_3716488_14 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000007731 255.0
BYD1_k127_3716488_15 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.000000000000000000000000000000000000000000000000000000000000000000761 233.0
BYD1_k127_3716488_16 D-alanyl-D-alanine carboxypeptidase - - - 0.00000000000000000000000000000000000000000000000000000006006 211.0
BYD1_k127_3716488_17 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000000000004997 158.0
BYD1_k127_3716488_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000006878 156.0
BYD1_k127_3716488_19 response regulator receiver K13599 - - 0.00000000000000002716 95.0
BYD1_k127_3716488_2 Pyridoxal-phosphate dependent enzyme K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003406 543.0
BYD1_k127_3716488_20 LemA family K03744 - - 0.000000000000004726 84.0
BYD1_k127_3716488_21 AntiSigma factor - - - 0.00000000652 66.0
BYD1_k127_3716488_22 Domain of unknown function (DUF4390) - - - 0.0000003407 59.0
BYD1_k127_3716488_23 - - - - 0.0000008589 57.0
BYD1_k127_3716488_3 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 489.0
BYD1_k127_3716488_4 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005857 484.0
BYD1_k127_3716488_5 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006532 435.0
BYD1_k127_3716488_6 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008173,GO:0008649,GO:0008757,GO:0009383,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 381.0
BYD1_k127_3716488_7 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 339.0
BYD1_k127_3716488_8 TIGRFAM DNA protecting protein DprA K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 330.0
BYD1_k127_3716488_9 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008338 311.0
BYD1_k127_3800918_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 462.0
BYD1_k127_3800918_1 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 335.0
BYD1_k127_3800918_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.0000000000000000000000000000000000000000000000101 187.0
BYD1_k127_3800918_3 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000003184 169.0
BYD1_k127_3800918_4 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000001583 68.0
BYD1_k127_3890075_0 aldehyde oxidase - - - 0.0 1219.0
BYD1_k127_3890075_1 peptidase S9 - - - 1.601e-275 872.0
BYD1_k127_3890075_10 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001246 354.0
BYD1_k127_3890075_11 PFAM bifunctional deaminase-reductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008894 323.0
BYD1_k127_3890075_12 Alpha beta hydrolase K00433 - 1.11.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001618 323.0
BYD1_k127_3890075_13 Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 302.0
BYD1_k127_3890075_14 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 309.0
BYD1_k127_3890075_15 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000104 286.0
BYD1_k127_3890075_16 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002801 277.0
BYD1_k127_3890075_17 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003831 268.0
BYD1_k127_3890075_18 Protein of unknown function (DUF541) K09797 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007599 273.0
BYD1_k127_3890075_19 2Fe-2S -binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008007 252.0
BYD1_k127_3890075_2 Circadian clock protein KaiC K08482 - - 2.746e-226 711.0
BYD1_k127_3890075_20 Domain of unknown function (DUF1905) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001255 251.0
BYD1_k127_3890075_21 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008694 250.0
BYD1_k127_3890075_22 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000348 241.0
BYD1_k127_3890075_23 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000009339 239.0
BYD1_k127_3890075_24 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K01759 GO:0003674,GO:0003824,GO:0004462,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016829,GO:0016846,GO:0034641,GO:0043603,GO:0044237,GO:0051186,GO:0071704,GO:1901564 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000009347 232.0
BYD1_k127_3890075_25 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.000000000000000000000000000000000000000000000000000000000000000000167 252.0
BYD1_k127_3890075_26 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000387 226.0
BYD1_k127_3890075_27 Tryptophan-rich sensory protein K05770 - - 0.000000000000000000000000000000000000000000000000000000000000004767 221.0
BYD1_k127_3890075_28 dioxygenase of extradiol dioxygenase family K06991 - - 0.00000000000000000000000000000000000000000000000000000000000007366 215.0
BYD1_k127_3890075_29 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000000584 224.0
BYD1_k127_3890075_3 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 607.0
BYD1_k127_3890075_30 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000003955 208.0
BYD1_k127_3890075_31 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000002785 198.0
BYD1_k127_3890075_32 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000003701 204.0
BYD1_k127_3890075_33 COG0655 Multimeric flavodoxin WrbA - - - 0.00000000000000000000000000000000000000000000000000001068 195.0
BYD1_k127_3890075_34 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000003062 188.0
BYD1_k127_3890075_35 Glutathione-dependent formaldehyde-activating - - - 0.000000000000000000000000000000000000000000000000004495 187.0
BYD1_k127_3890075_36 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000009861 182.0
BYD1_k127_3890075_37 acetyltransferase K22441 - 2.3.1.57 0.000000000000000000000000000000000000000000000004978 186.0
BYD1_k127_3890075_38 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000000001171 175.0
BYD1_k127_3890075_39 G T U mismatch-specific DNA glycosylase K03649 - 3.2.2.28 0.00000000000000000000000000000000000000000000004545 183.0
BYD1_k127_3890075_4 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000191 529.0
BYD1_k127_3890075_40 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000001453 187.0
BYD1_k127_3890075_41 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000001055 160.0
BYD1_k127_3890075_42 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000001377 157.0
BYD1_k127_3890075_43 PFAM GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000001404 165.0
BYD1_k127_3890075_44 PFAM Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000000000006226 144.0
BYD1_k127_3890075_45 MazG-like family - - - 0.000000000000000000000000000000000001418 142.0
BYD1_k127_3890075_46 - - - - 0.000000000000000000000000000000000005158 141.0
BYD1_k127_3890075_47 Domain of unknown function (DUF4440) - - - 0.00000000000000000000000000000000006748 140.0
BYD1_k127_3890075_48 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000006908 148.0
BYD1_k127_3890075_49 addiction module antidote protein HigA K21498 - - 0.0000000000000000000000000000000008366 131.0
BYD1_k127_3890075_5 PFAM beta-lactamase domain protein K06897 - 2.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 449.0
BYD1_k127_3890075_50 transglycosylase associated protein - - - 0.00000000000000000000000000000001751 130.0
BYD1_k127_3890075_51 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000000236 119.0
BYD1_k127_3890075_52 Isochorismatase family - - - 0.000000000000000000000000002194 121.0
BYD1_k127_3890075_53 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000000000000137 112.0
BYD1_k127_3890075_54 - - - - 0.000000000000000000000002249 112.0
BYD1_k127_3890075_55 Response regulator, receiver - - - 0.00000000000000000001181 100.0
BYD1_k127_3890075_56 PFAM Integral membrane protein TerC K05794 - - 0.0000000000000000001078 91.0
BYD1_k127_3890075_57 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000001465 99.0
BYD1_k127_3890075_58 - - - - 0.0000000000000000009518 90.0
BYD1_k127_3890075_59 - - - - 0.000000000000000001824 94.0
BYD1_k127_3890075_6 major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 426.0
BYD1_k127_3890075_60 Domain of unknown function (DUF4437) - - - 0.0000000000000001841 86.0
BYD1_k127_3890075_61 Domain of unknown function (DUF4440) - - - 0.0000000000000009561 86.0
BYD1_k127_3890075_62 Domain of unknown function (DUF4440) - - - 0.0000000000001259 77.0
BYD1_k127_3890075_63 - - - - 0.000000000000149 72.0
BYD1_k127_3890075_64 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.00000000001644 67.0
BYD1_k127_3890075_65 Protein of unknown function (DUF2662) - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.000000001733 69.0
BYD1_k127_3890075_66 alpha/beta hydrolase fold - - - 0.00000072 59.0
BYD1_k127_3890075_67 Cupin 2, conserved barrel domain protein - - - 0.000003938 55.0
BYD1_k127_3890075_68 OsmC-like protein K04063 - - 0.00003284 48.0
BYD1_k127_3890075_69 Domain of unknown function (DUF4440) - - - 0.0002496 43.0
BYD1_k127_3890075_7 Transporter associated domain K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004348 417.0
BYD1_k127_3890075_70 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0003855 43.0
BYD1_k127_3890075_8 Peptidase dimerisation domain K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001513 392.0
BYD1_k127_3890075_9 RibD C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001584 340.0
BYD1_k127_3941196_0 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 1.04e-222 702.0
BYD1_k127_3941196_1 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 5.258e-215 692.0
BYD1_k127_3941196_10 Fumarylacetoacetate (FAA) hydrolase family K16171 - 3.7.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008878 448.0
BYD1_k127_3941196_11 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 379.0
BYD1_k127_3941196_12 Peptidase T2, asparaginase 2 K13051 - 3.4.19.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007859 356.0
BYD1_k127_3941196_13 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000144 353.0
BYD1_k127_3941196_14 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 333.0
BYD1_k127_3941196_15 Multidrug efflux pump K03327 GO:0003674,GO:0005215,GO:0006810,GO:0006855,GO:0008150,GO:0015238,GO:0015893,GO:0022857,GO:0042221,GO:0042493,GO:0042891,GO:0042895,GO:0046677,GO:0050896,GO:0051179,GO:0051234,GO:0055085 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 326.0
BYD1_k127_3941196_16 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009345 310.0
BYD1_k127_3941196_17 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 309.0
BYD1_k127_3941196_18 Exodeoxyribonuclease IX - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 300.0
BYD1_k127_3941196_19 Fructosamine kinase - GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0044237 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002161 288.0
BYD1_k127_3941196_2 Peptidase S46 - - - 3.711e-208 668.0
BYD1_k127_3941196_20 PFAM HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006821 284.0
BYD1_k127_3941196_21 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000001459 229.0
BYD1_k127_3941196_22 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000008166 213.0
BYD1_k127_3941196_23 Cytochrome B561 K12262 - - 0.00000000000000000000000000000000000000000000004485 175.0
BYD1_k127_3941196_24 NADP transhydrogenase K00324 - 1.6.1.2 0.00000000000000000000000000000000000000004659 153.0
BYD1_k127_3941196_25 ABC-type transport system, permease components - - - 0.00000000000000000000000000000000000001045 159.0
BYD1_k127_3941196_26 Sporulation related domain - - - 0.0000000000000000000000000000000006872 136.0
BYD1_k127_3941196_27 COG0724 RNA-binding proteins (RRM domain) - - - 0.000000000000000000000000000002587 123.0
BYD1_k127_3941196_28 Belongs to the UPF0312 family K12262 - - 0.000000000000000000000003724 116.0
BYD1_k127_3941196_29 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000002187 108.0
BYD1_k127_3941196_3 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 3.188e-204 684.0
BYD1_k127_3941196_30 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000001076 84.0
BYD1_k127_3941196_31 Protein of unknown function (DUF2845) - - - 0.0000000000009194 74.0
BYD1_k127_3941196_32 - - - - 0.00000000003144 76.0
BYD1_k127_3941196_33 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000004492 69.0
BYD1_k127_3941196_34 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000004492 69.0
BYD1_k127_3941196_35 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0007154,GO:0007165,GO:0008150,GO:0009897,GO:0009986,GO:0009987,GO:0015688,GO:0015833,GO:0015889,GO:0015891,GO:0015893,GO:0016020,GO:0016021,GO:0016032,GO:0019058,GO:0019062,GO:0019904,GO:0022610,GO:0023052,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0031992,GO:0032991,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0042914,GO:0043213,GO:0044403,GO:0044406,GO:0044419,GO:0044425,GO:0044459,GO:0044464,GO:0044650,GO:0046813,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051180,GO:0051181,GO:0051234,GO:0051704,GO:0051716,GO:0060089,GO:0065007,GO:0071575,GO:0071702,GO:0071705,GO:0071944,GO:0098002,GO:0098552,GO:0098670,GO:0098796,GO:0098797,GO:1901678 - 0.00000004156 66.0
BYD1_k127_3941196_4 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 3.674e-194 610.0
BYD1_k127_3941196_5 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 611.0
BYD1_k127_3941196_6 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 561.0
BYD1_k127_3941196_7 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 543.0
BYD1_k127_3941196_8 acetyl-coa hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 524.0
BYD1_k127_3941196_9 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00324 - 1.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008143 439.0
BYD1_k127_3970632_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034203,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 533.0
BYD1_k127_3970632_1 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006374 447.0
BYD1_k127_3970632_2 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 363.0
BYD1_k127_3970632_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000002962 146.0
BYD1_k127_3970632_4 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0000027,GO:0001558,GO:0003674,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0040008,GO:0042254,GO:0042255,GO:0042256,GO:0042273,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044877,GO:0048518,GO:0050789,GO:0050794,GO:0051128,GO:0065003,GO:0065007,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090069,GO:0090070,GO:1901564,GO:1901566,GO:1901576,GO:1902626,GO:1990904 - 0.000000000000000000000000000000000002673 138.0
BYD1_k127_3970632_5 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000004803 91.0
BYD1_k127_4004884_0 WD40-like Beta Propeller Repeat - - - 5.369e-251 794.0
BYD1_k127_4004884_1 Homospermidine synthase K00808 - 2.5.1.44 4.864e-230 722.0
BYD1_k127_4004884_10 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000001239 207.0
BYD1_k127_4004884_11 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.0000000000000000000000000000000000000000000000000001773 192.0
BYD1_k127_4004884_2 DNA helicase K03657 - 3.6.4.12 2.944e-229 730.0
BYD1_k127_4004884_3 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 1.664e-196 632.0
BYD1_k127_4004884_4 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 317.0
BYD1_k127_4004884_5 SMART Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 295.0
BYD1_k127_4004884_6 FIST N domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003356 285.0
BYD1_k127_4004884_7 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000006824 251.0
BYD1_k127_4004884_8 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000006151 229.0
BYD1_k127_4004884_9 peptidase K07386 - - 0.0000000000000000000000000000000000000000000000000000000000004196 227.0
BYD1_k127_4322900_0 von Willebrand factor, type A - - - 0.0000000000000000000000000002565 128.0
BYD1_k127_4322900_1 - - - - 0.0002096 55.0
BYD1_k127_4683126_0 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 412.0
BYD1_k127_4683126_1 Mannose-6-phosphate isomerase - - - 0.00000000000000000000000000000000000000000000002557 171.0
BYD1_k127_5040884_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 7.149e-292 909.0
BYD1_k127_5040884_1 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0000097,GO:0000166,GO:0001666,GO:0002376,GO:0002437,GO:0002439,GO:0002544,GO:0003674,GO:0003824,GO:0004013,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006152,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0006950,GO:0006952,GO:0006954,GO:0006955,GO:0007584,GO:0007610,GO:0007622,GO:0007623,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009164,GO:0009605,GO:0009628,GO:0009987,GO:0009991,GO:0016053,GO:0016054,GO:0016787,GO:0016801,GO:0016802,GO:0017076,GO:0017144,GO:0019439,GO:0019510,GO:0019752,GO:0030554,GO:0031667,GO:0033353,GO:0034641,GO:0034655,GO:0034656,GO:0036094,GO:0036293,GO:0042219,GO:0042221,GO:0042278,GO:0042454,GO:0042745,GO:0042802,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044272,GO:0044273,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046130,GO:0046394,GO:0046395,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0046700,GO:0048037,GO:0048511,GO:0048512,GO:0050662,GO:0050667,GO:0050896,GO:0051186,GO:0051187,GO:0051287,GO:0055086,GO:0070482,GO:0071268,GO:0071704,GO:0072521,GO:0072523,GO:0097159,GO:0097458,GO:0098604,GO:0120025,GO:1901135,GO:1901136,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607,GO:1901657,GO:1901658 3.3.1.1 3.092e-248 773.0
BYD1_k127_5040884_10 TraB family K09973 - - 0.00000000000000000000000000000000000000000000004521 182.0
BYD1_k127_5040884_2 Penicillin amidase K01434 - 3.5.1.11 1.661e-196 662.0
BYD1_k127_5040884_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 5.804e-195 625.0
BYD1_k127_5040884_4 Belongs to the phosphoglycerate kinase family K00927 GO:0003674,GO:0003824,GO:0004618,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001976 522.0
BYD1_k127_5040884_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001951 531.0
BYD1_k127_5040884_6 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 507.0
BYD1_k127_5040884_7 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006078 396.0
BYD1_k127_5040884_8 Glutamate-1-semialdehyde aminotransferase K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000001013 235.0
BYD1_k127_5040884_9 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000007843 212.0
BYD1_k127_5137713_0 WD40-like Beta Propeller Repeat - - - 0.0 1035.0
BYD1_k127_5137713_1 Prolyl oligopeptidase family - - - 8.093e-275 865.0
BYD1_k127_5137713_2 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00823 - 2.6.1.19 5.732e-218 683.0
BYD1_k127_5137713_3 Aldehyde dehydrogenase family K00294 - 1.2.1.88 3.246e-195 615.0
BYD1_k127_5137713_4 Peptidase family S58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 522.0
BYD1_k127_5137713_5 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002494 520.0
BYD1_k127_5137713_6 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001947 455.0
BYD1_k127_5137713_7 Amino acid permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003365 474.0
BYD1_k127_5137713_8 Acyl CoA acetate 3-ketoacid CoA transferase beta subunit K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 355.0
BYD1_k127_5137713_9 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003859 290.0
BYD1_k127_5234144_0 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007821 434.0
BYD1_k127_5234144_1 Redoxin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 339.0
BYD1_k127_5234144_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007594 319.0
BYD1_k127_5234144_3 Putative phosphatase (DUF442) - - - 0.00000000000000000000000000000000000000000000000000000000002518 209.0
BYD1_k127_5271563_0 COG3459 Cellobiose phosphorylase - - - 0.0 4071.0
BYD1_k127_5271563_1 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1513.0
BYD1_k127_5271563_10 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 9.406e-240 775.0
BYD1_k127_5271563_11 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 4.46e-231 737.0
BYD1_k127_5271563_12 amino acid K03294 - - 1.787e-225 711.0
BYD1_k127_5271563_13 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 7.124e-211 666.0
BYD1_k127_5271563_14 Insulinase (Peptidase family M16) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008221 580.0
BYD1_k127_5271563_15 carboxylase K01968 - 6.4.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 593.0
BYD1_k127_5271563_16 Peptidase family M28 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004814 578.0
BYD1_k127_5271563_17 Acyl-CoA dehydrogenase, middle domain K00253 - 1.3.8.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 563.0
BYD1_k127_5271563_18 Belongs to the peptidase S41A family K03797 GO:0003674,GO:0003824,GO:0004175,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016020,GO:0016787,GO:0019538,GO:0023052,GO:0030163,GO:0030288,GO:0030313,GO:0031975,GO:0042221,GO:0042597,GO:0043170,GO:0044238,GO:0044464,GO:0046677,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003852 569.0
BYD1_k127_5271563_19 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 555.0
BYD1_k127_5271563_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1114.0
BYD1_k127_5271563_20 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005065 557.0
BYD1_k127_5271563_21 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001505 537.0
BYD1_k127_5271563_22 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 519.0
BYD1_k127_5271563_23 Belongs to the peptidase M50B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 512.0
BYD1_k127_5271563_24 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046116,GO:0046483,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003201 502.0
BYD1_k127_5271563_25 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002441 495.0
BYD1_k127_5271563_26 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 462.0
BYD1_k127_5271563_27 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005334 458.0
BYD1_k127_5271563_28 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 452.0
BYD1_k127_5271563_29 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001199 429.0
BYD1_k127_5271563_3 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1097.0
BYD1_k127_5271563_30 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006605 426.0
BYD1_k127_5271563_31 Peptidase, M16 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 400.0
BYD1_k127_5271563_32 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 394.0
BYD1_k127_5271563_33 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005939 386.0
BYD1_k127_5271563_34 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 382.0
BYD1_k127_5271563_35 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 393.0
BYD1_k127_5271563_36 Aminotransferase class-V K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 383.0
BYD1_k127_5271563_37 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 374.0
BYD1_k127_5271563_38 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 393.0
BYD1_k127_5271563_39 galactose oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000438 369.0
BYD1_k127_5271563_4 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K15022 - 1.17.1.10 9.67e-288 895.0
BYD1_k127_5271563_40 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 362.0
BYD1_k127_5271563_41 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 358.0
BYD1_k127_5271563_42 Inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 328.0
BYD1_k127_5271563_43 Belongs to the short-chain dehydrogenases reductases (SDR) family K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009395 323.0
BYD1_k127_5271563_44 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000204 316.0
BYD1_k127_5271563_45 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008646 338.0
BYD1_k127_5271563_46 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0008104,GO:0008150,GO:0008152,GO:0009279,GO:0009987,GO:0016020,GO:0016043,GO:0016491,GO:0019867,GO:0022607,GO:0030312,GO:0030313,GO:0031224,GO:0031230,GO:0031241,GO:0031246,GO:0031975,GO:0032991,GO:0033036,GO:0034613,GO:0042802,GO:0043163,GO:0043165,GO:0044085,GO:0044091,GO:0044425,GO:0044462,GO:0044464,GO:0045184,GO:0045229,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0055114,GO:0061024,GO:0070727,GO:0071709,GO:0071840,GO:0071944,GO:0072657,GO:0090150,GO:0098552,GO:0098796,GO:1990063 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001023 290.0
BYD1_k127_5271563_47 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001472 289.0
BYD1_k127_5271563_48 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001978 280.0
BYD1_k127_5271563_49 membrane protein, TerC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003813 280.0
BYD1_k127_5271563_5 Acetoacetyl-CoA synthase K01907 - 6.2.1.16 3.143e-277 865.0
BYD1_k127_5271563_50 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007316 280.0
BYD1_k127_5271563_51 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000862 267.0
BYD1_k127_5271563_52 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001267 273.0
BYD1_k127_5271563_53 Domain of unknown function (DUF4398) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002047 270.0
BYD1_k127_5271563_54 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007582 274.0
BYD1_k127_5271563_55 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000007409 247.0
BYD1_k127_5271563_56 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000006468 218.0
BYD1_k127_5271563_57 Enoyl-CoA hydratase carnithine racemase K13766 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000008763 233.0
BYD1_k127_5271563_58 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000006216 221.0
BYD1_k127_5271563_59 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000003345 221.0
BYD1_k127_5271563_6 Di-haem cytochrome c peroxidase K00428 GO:0005575,GO:0005623,GO:0042597,GO:0044464 1.11.1.5 1.321e-271 889.0
BYD1_k127_5271563_60 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.000000000000000000000000000000000000000000000000000000000005012 233.0
BYD1_k127_5271563_61 Nudix N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000006046 211.0
BYD1_k127_5271563_62 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) - - - 0.00000000000000000000000000000000000000000000000000000002982 200.0
BYD1_k127_5271563_63 Protein tyrosine kinase - - - 0.0000000000000000000000000000000000000000000000000000007947 213.0
BYD1_k127_5271563_64 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000005816 191.0
BYD1_k127_5271563_65 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000001986 176.0
BYD1_k127_5271563_66 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000005498 175.0
BYD1_k127_5271563_67 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K05997,K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - 0.0000000000000000000000000000000000000000004994 159.0
BYD1_k127_5271563_69 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000004421 160.0
BYD1_k127_5271563_7 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 4.521e-264 827.0
BYD1_k127_5271563_70 FCD - - - 0.00000000000000000000000000000000000001654 153.0
BYD1_k127_5271563_71 - - - - 0.000000000000000000000000000000000003138 153.0
BYD1_k127_5271563_72 protein conserved in bacteria - - - 0.00000000000000000000000000000000001209 143.0
BYD1_k127_5271563_73 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.00000000000000000000000000000000007946 149.0
BYD1_k127_5271563_74 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000004646 134.0
BYD1_k127_5271563_75 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000386 130.0
BYD1_k127_5271563_76 lipid kinase, YegS Rv2252 BmrU family - - - 0.000000000000000000000000000000006244 147.0
BYD1_k127_5271563_77 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000003208 130.0
BYD1_k127_5271563_78 PDZ domain - - - 0.00000000000000000000000000000567 131.0
BYD1_k127_5271563_79 SCO1/SenC K07152 - - 0.00000000000000000000000000118 121.0
BYD1_k127_5271563_8 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 1.407e-252 806.0
BYD1_k127_5271563_80 Protein of unknown function (DUF1249) K09920 - - 0.000000000000000000000000008575 115.0
BYD1_k127_5271563_81 Domain of unknown function (DUF4398) - - - 0.0000000000000000000006034 100.0
BYD1_k127_5271563_82 4-hydroxyphenylpyruvate dioxygenase K00457 - 1.13.11.27 0.000000000000000000003031 93.0
BYD1_k127_5271563_83 - - - - 0.000001431 57.0
BYD1_k127_5271563_86 - - - - 0.0007129 51.0
BYD1_k127_5271563_9 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 5.988e-242 767.0
BYD1_k127_531864_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009314,GO:0009380,GO:0009381,GO:0009628,GO:0009987,GO:0016462,GO:0016787,GO:0016788,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033554,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.0 1387.0
BYD1_k127_531864_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1195.0
BYD1_k127_531864_10 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 596.0
BYD1_k127_531864_11 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 604.0
BYD1_k127_531864_12 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 577.0
BYD1_k127_531864_13 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 577.0
BYD1_k127_531864_14 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007021 574.0
BYD1_k127_531864_15 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 595.0
BYD1_k127_531864_16 serine dehydratase beta chain K01752 - 4.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005756 537.0
BYD1_k127_531864_17 Amidohydrolase K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000746 529.0
BYD1_k127_531864_18 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 539.0
BYD1_k127_531864_19 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 522.0
BYD1_k127_531864_2 Pro-apoptotic serine protease nma111. Source PGD - - - 5.223e-240 777.0
BYD1_k127_531864_20 Splits dipeptides with a prolyl residue in the C- terminal position K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 494.0
BYD1_k127_531864_21 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001588 515.0
BYD1_k127_531864_22 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 477.0
BYD1_k127_531864_23 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001275 480.0
BYD1_k127_531864_24 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003567 484.0
BYD1_k127_531864_25 SAICAR synthetase K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 417.0
BYD1_k127_531864_26 pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 416.0
BYD1_k127_531864_27 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 410.0
BYD1_k127_531864_28 ABC transporter substrate-binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008977 383.0
BYD1_k127_531864_29 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 392.0
BYD1_k127_531864_3 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00283 - 1.4.4.2 2.451e-239 753.0
BYD1_k127_531864_30 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006357 381.0
BYD1_k127_531864_31 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008159 346.0
BYD1_k127_531864_32 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006933 344.0
BYD1_k127_531864_33 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002504 348.0
BYD1_k127_531864_34 Protein of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 359.0
BYD1_k127_531864_35 PFAM CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501 315.0
BYD1_k127_531864_36 Type II secretory pathway component ExeA K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002728 318.0
BYD1_k127_531864_37 COG1538 Outer membrane protein K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 315.0
BYD1_k127_531864_38 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002085 305.0
BYD1_k127_531864_39 Belongs to the SUA5 family K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003067 319.0
BYD1_k127_531864_4 COG0457 FOG TPR repeat - - - 4.332e-224 715.0
BYD1_k127_531864_40 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 295.0
BYD1_k127_531864_41 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K18800 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 315.0
BYD1_k127_531864_42 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000263 280.0
BYD1_k127_531864_43 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003029 279.0
BYD1_k127_531864_44 Major facilitator superfamily - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001658 280.0
BYD1_k127_531864_45 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000001487 260.0
BYD1_k127_531864_46 cytochrome c oxidase, cbb3-type, subunit II K00405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001776 249.0
BYD1_k127_531864_47 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000009788 239.0
BYD1_k127_531864_48 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000002079 232.0
BYD1_k127_531864_49 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.00000000000000000000000000000000000000000000000000000000000000002811 231.0
BYD1_k127_531864_5 modulator of DNA gyrase K03568 - - 3.659e-219 694.0
BYD1_k127_531864_50 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.00000000000000000000000000000000000000000000000000000000000004878 219.0
BYD1_k127_531864_51 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000568 216.0
BYD1_k127_531864_52 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000001718 216.0
BYD1_k127_531864_53 Cytochrome c oxidase, subunit K00406 - - 0.00000000000000000000000000000000000000000000000000000000003132 217.0
BYD1_k127_531864_54 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000008951 199.0
BYD1_k127_531864_55 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000001198 201.0
BYD1_k127_531864_56 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.00000000000000000000000000000000000000000000000000001019 199.0
BYD1_k127_531864_57 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.00000000000000000000000000000000000000000000000000002148 192.0
BYD1_k127_531864_58 EVE domain - - - 0.000000000000000000000000000000000000000000000000001194 188.0
BYD1_k127_531864_59 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000001273 207.0
BYD1_k127_531864_6 Sugar (and other) transporter - - - 1.205e-212 674.0
BYD1_k127_531864_60 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000003805 181.0
BYD1_k127_531864_61 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000001362 184.0
BYD1_k127_531864_62 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000002271 182.0
BYD1_k127_531864_63 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000004367 169.0
BYD1_k127_531864_64 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000007191 168.0
BYD1_k127_531864_65 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000005977 156.0
BYD1_k127_531864_66 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000006924 159.0
BYD1_k127_531864_67 Ribosomal protein L17 K02879 - - 0.00000000000000000000000000000000000000004116 156.0
BYD1_k127_531864_68 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005216,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015075,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0034220,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.0000000000000000000000000000000000000004531 163.0
BYD1_k127_531864_69 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000006794 154.0
BYD1_k127_531864_7 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 2.209e-201 638.0
BYD1_k127_531864_70 Pterin 4 alpha carbinolamine dehydratase K01724 - 4.2.1.96 0.00000000000000000000000000000000000002161 147.0
BYD1_k127_531864_71 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000259 143.0
BYD1_k127_531864_72 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.0000000000000000000000000000000001769 140.0
BYD1_k127_531864_73 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000002512 136.0
BYD1_k127_531864_74 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000685 130.0
BYD1_k127_531864_75 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000008273 127.0
BYD1_k127_531864_76 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000000004822 108.0
BYD1_k127_531864_77 Yip1 domain - - - 0.00000000000000000000001572 108.0
BYD1_k127_531864_78 Pfam:DUF461 K09796 - - 0.00000000000000000000004616 115.0
BYD1_k127_531864_79 Belongs to the UPF0149 family K09895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000007462 106.0
BYD1_k127_531864_8 Bacterial protein of unknown function (DUF885) - - - 5.427e-201 640.0
BYD1_k127_531864_80 Protein of unknown function (DUF615) K09889 - - 0.0000000000000000000004903 108.0
BYD1_k127_531864_81 Acetyltransferase (GNAT) family - - - 0.00000000000000632 83.0
BYD1_k127_531864_82 Belongs to the bacterial ribosomal protein bL36 family K02919 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000261 68.0
BYD1_k127_531864_83 Outer membrane protein beta-barrel domain - - - 0.00000000002217 72.0
BYD1_k127_531864_84 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.0000000000641 72.0
BYD1_k127_531864_85 Ribosomal protein L30 K02907 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000002007 66.0
BYD1_k127_531864_9 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006126 610.0
BYD1_k127_535460_0 Subtilase family - - - 5.959e-279 882.0
BYD1_k127_535460_1 Subtilase family K17734 - - 5.132e-209 669.0
BYD1_k127_535460_10 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000445 263.0
BYD1_k127_535460_11 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001291 268.0
BYD1_k127_535460_12 Amidinotransferase K01482 - 3.5.3.18 0.00000000000000000000000000000000000000000000000000000000000000000000000002096 259.0
BYD1_k127_535460_13 peptidase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007298 250.0
BYD1_k127_535460_14 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000000001411 247.0
BYD1_k127_535460_15 Phosphatidylethanolamine-binding protein K06910 - - 0.00000000000000000000000000000000000000000000000000000000000000000002284 235.0
BYD1_k127_535460_16 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000000000004277 240.0
BYD1_k127_535460_17 histidine kinase, dimerisation and phosphoacceptor region K05962 - 2.7.13.1 0.000000000000000000000000000000000000000000000000000000000000004348 234.0
BYD1_k127_535460_18 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000002378 220.0
BYD1_k127_535460_19 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000000000000301 218.0
BYD1_k127_535460_2 Thermolysin metallopeptidase, alpha-helical domain K01400 - 3.4.24.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 548.0
BYD1_k127_535460_20 DoxX-like family K15977 - - 0.000000000000000000000000000000000000000000000000004594 184.0
BYD1_k127_535460_21 - - - - 0.0000000000000000000000000000000000000000000004187 177.0
BYD1_k127_535460_22 protein conserved in bacteria K04750 - - 0.000000000000000000000000000000000000000000002745 168.0
BYD1_k127_535460_23 - - - - 0.00000000000000000000000000000000000000004654 155.0
BYD1_k127_535460_24 Forkhead associated domain - - - 0.00000000000000000000000000000000000000007012 162.0
BYD1_k127_535460_25 Putative DNA-binding domain - - - 0.000000000000000000000000000000000005625 155.0
BYD1_k127_535460_26 CsbD-like - - - 0.000000000000000000000006818 106.0
BYD1_k127_535460_28 COGs COG4935 Regulatory P domain of the subtilisin-like proprotein convertase and other protease - - - 0.000000000000001299 93.0
BYD1_k127_535460_29 periplasmic or secreted lipoprotein K04065 - - 0.00000000000003296 79.0
BYD1_k127_535460_3 Protein tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 494.0
BYD1_k127_535460_30 BON domain K04065 - - 0.00000000000004493 79.0
BYD1_k127_535460_31 Protein of unknown function (DUF1328) - - - 0.0000000000004905 70.0
BYD1_k127_535460_32 response regulator - - - 0.000000000002366 72.0
BYD1_k127_535460_33 - - - - 0.00000000000277 72.0
BYD1_k127_535460_34 OmpA-like transmembrane domain - - - 0.000000000313 69.0
BYD1_k127_535460_4 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006718 415.0
BYD1_k127_535460_5 Protein of unknown function (DUF692) K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 375.0
BYD1_k127_535460_6 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002511 345.0
BYD1_k127_535460_7 antibiotic catabolic process K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 341.0
BYD1_k127_535460_8 amino acid K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 315.0
BYD1_k127_535460_9 chitinase K01183 - 3.2.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 322.0
BYD1_k127_5425985_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1172.0
BYD1_k127_5425985_1 Prolyl oligopeptidase, N-terminal beta-propeller domain K01322 - 3.4.21.26 4.302e-234 745.0
BYD1_k127_5425985_10 Responsible for synthesis of pseudouridine from uracil K06180 GO:0000154,GO:0000455,GO:0001522,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016853,GO:0016866,GO:0022613,GO:0031118,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 374.0
BYD1_k127_5425985_11 Histidine kinase K02668 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002845 356.0
BYD1_k127_5425985_12 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 314.0
BYD1_k127_5425985_13 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 319.0
BYD1_k127_5425985_14 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 304.0
BYD1_k127_5425985_15 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001458 279.0
BYD1_k127_5425985_16 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000008062 256.0
BYD1_k127_5425985_17 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000008617 255.0
BYD1_k127_5425985_18 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000001331 244.0
BYD1_k127_5425985_19 Protein of unknown function (DUF229) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001363 260.0
BYD1_k127_5425985_2 peptidase K01278 - 3.4.14.5 1.519e-228 730.0
BYD1_k127_5425985_20 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.0000000000000000000000000000000000000000000000000000000000000009118 228.0
BYD1_k127_5425985_21 Flavoprotein K01598 - 4.1.1.36 0.0000000000000000000000000000000000000000000000000000000000005925 215.0
BYD1_k127_5425985_22 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000003885 205.0
BYD1_k127_5425985_23 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000002643 190.0
BYD1_k127_5425985_24 Domain of unknown function (DUF2520) - - - 0.0000000000000000000000000000000000000000000000001731 185.0
BYD1_k127_5425985_25 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000001269 160.0
BYD1_k127_5425985_26 Tfp pilus assembly protein, major pilin PilA K02650 - - 0.000000000000000000000000000000000004262 142.0
BYD1_k127_5425985_27 DNA / pantothenate metabolism flavoprotein K21977 - 6.3.2.5 0.0000000000000000000000000000008855 136.0
BYD1_k127_5425985_28 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000002762 79.0
BYD1_k127_5425985_29 Protein of unknown function (DUF721) - - - 0.0007654 48.0
BYD1_k127_5425985_3 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 5.772e-226 713.0
BYD1_k127_5425985_4 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 584.0
BYD1_k127_5425985_5 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005238 519.0
BYD1_k127_5425985_6 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004963 513.0
BYD1_k127_5425985_7 Type II secretion system K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002022 500.0
BYD1_k127_5425985_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 490.0
BYD1_k127_5425985_9 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 454.0
BYD1_k127_55095_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1560.0
BYD1_k127_55095_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1158.0
BYD1_k127_55095_10 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006566,GO:0006567,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0008652,GO:0008743,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046870,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 1.1.1.103 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007291 550.0
BYD1_k127_55095_11 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007869 533.0
BYD1_k127_55095_12 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 519.0
BYD1_k127_55095_13 signal peptide peptidase K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 468.0
BYD1_k127_55095_14 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261 448.0
BYD1_k127_55095_15 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000945 451.0
BYD1_k127_55095_16 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001242 434.0
BYD1_k127_55095_17 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007115 399.0
BYD1_k127_55095_18 PFAM histone deacetylase superfamily K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 399.0
BYD1_k127_55095_19 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 407.0
BYD1_k127_55095_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 1e-323 1037.0
BYD1_k127_55095_20 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 367.0
BYD1_k127_55095_21 FeS assembly ATPase SufC K09013 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 363.0
BYD1_k127_55095_22 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 351.0
BYD1_k127_55095_23 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 351.0
BYD1_k127_55095_24 PFAM ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 346.0
BYD1_k127_55095_25 PFAM EAL domain K21025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002027 338.0
BYD1_k127_55095_26 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 303.0
BYD1_k127_55095_27 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 302.0
BYD1_k127_55095_28 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 317.0
BYD1_k127_55095_29 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007062 282.0
BYD1_k127_55095_3 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 4.098e-294 919.0
BYD1_k127_55095_30 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003288 283.0
BYD1_k127_55095_31 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003602 274.0
BYD1_k127_55095_32 FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001218 266.0
BYD1_k127_55095_33 PFAM Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001333 264.0
BYD1_k127_55095_34 assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008885 262.0
BYD1_k127_55095_35 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000000000000003492 218.0
BYD1_k127_55095_36 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000007702 216.0
BYD1_k127_55095_37 PFAM VacJ family lipoprotein K04754 - - 0.000000000000000000000000000000000000000000000000000000001069 211.0
BYD1_k127_55095_38 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.00000000000000000000000000000000000000000000000003999 188.0
BYD1_k127_55095_39 Riboflavin synthase K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000008504 192.0
BYD1_k127_55095_4 ABC transporter - - - 3.178e-284 890.0
BYD1_k127_55095_40 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000636 182.0
BYD1_k127_55095_41 PFAM Amino acid-binding ACT K03567 - - 0.000000000000000000000000000000000000000000000001689 196.0
BYD1_k127_55095_42 SUF system FeS assembly protein K04488 - - 0.0000000000000000000000000000000000000000000006356 182.0
BYD1_k127_55095_43 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000001375 177.0
BYD1_k127_55095_44 NUDIX domain K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000004763 177.0
BYD1_k127_55095_45 ABC-type transport system involved in resistance to organic solvents auxiliary component K07323 - - 0.0000000000000000000000000000000000000000001743 168.0
BYD1_k127_55095_46 PFAM Mammalian cell entry related domain protein K02067 - - 0.000000000000000000000000000000000000000008723 159.0
BYD1_k127_55095_47 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000000000000000000000000000000002765 158.0
BYD1_k127_55095_48 Domain of unknown function (DUF1820) - - - 0.000000000000000000000000000000000000002372 151.0
BYD1_k127_55095_49 transcriptional regulator - - - 0.0000000000000000000000000000009095 127.0
BYD1_k127_55095_5 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 3.881e-267 835.0
BYD1_k127_55095_50 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.000000000000000000000000000001998 132.0
BYD1_k127_55095_51 Type VI secretion system FHA domain protein K11894,K11913 - - 0.0000000000000000000000000006743 126.0
BYD1_k127_55095_52 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0000028,GO:0000217,GO:0000400,GO:0003674,GO:0003676,GO:0003677,GO:0003735,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006259,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016787,GO:0016788,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0090305,GO:0097159,GO:0140097,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000159 106.0
BYD1_k127_55095_53 Bacterial protein of unknown function (DUF883) - - - 0.00000000000000002817 86.0
BYD1_k127_55095_54 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000007364 80.0
BYD1_k127_55095_55 NTP binding protein (Contains STAS domain) K07122 - - 0.000000007641 63.0
BYD1_k127_55095_6 TIGRFAM FeS assembly protein SufB K09014 - - 1.401e-259 807.0
BYD1_k127_55095_7 SMART Nucleotide binding protein, PINc K07175 - - 5.978e-214 677.0
BYD1_k127_55095_8 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 7.72e-211 661.0
BYD1_k127_55095_9 Cysteine-rich domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 600.0
BYD1_k127_5583260_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.035e-199 639.0
BYD1_k127_5583260_1 Belongs to the MurCDEF family K01924 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008763,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 587.0
BYD1_k127_5583260_10 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 330.0
BYD1_k127_5583260_11 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000009804 166.0
BYD1_k127_5583260_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 522.0
BYD1_k127_5583260_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 505.0
BYD1_k127_5583260_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 441.0
BYD1_k127_5583260_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004376 454.0
BYD1_k127_5583260_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002588 413.0
BYD1_k127_5583260_7 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 383.0
BYD1_k127_5583260_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 377.0
BYD1_k127_5583260_9 Cell wall formation K00075 - 1.3.1.98 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 346.0
BYD1_k127_5624238_0 Efflux pump membrane transporter K19585 - - 0.0 1465.0
BYD1_k127_5624238_1 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1142.0
BYD1_k127_5624238_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 615.0
BYD1_k127_5624238_11 Insecticidal toxin complex protein TcaC - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 646.0
BYD1_k127_5624238_12 amidohydrolase K12941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 584.0
BYD1_k127_5624238_13 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 577.0
BYD1_k127_5624238_14 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170,K18356 - 1.2.1.58,1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 521.0
BYD1_k127_5624238_15 PFAM Magnesium chelatase, ChlI subunit K07391 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009649 522.0
BYD1_k127_5624238_16 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 470.0
BYD1_k127_5624238_17 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298,K19586 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 458.0
BYD1_k127_5624238_18 Reductase C-terminal K00529 - 1.18.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 437.0
BYD1_k127_5624238_19 anion transporter K14445 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002495 419.0
BYD1_k127_5624238_2 TonB dependent receptor - - - 3.591e-294 921.0
BYD1_k127_5624238_20 N-terminal domain of oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009834 404.0
BYD1_k127_5624238_21 tryptophan 2,3-dioxygenase activity K00453 - 1.13.11.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 390.0
BYD1_k127_5624238_22 Zn-dependent hydrolases including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002507 373.0
BYD1_k127_5624238_23 Mediates influx of magnesium ions K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 335.0
BYD1_k127_5624238_24 Periplasmic binding protein LacI transcriptional regulator K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 344.0
BYD1_k127_5624238_25 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 333.0
BYD1_k127_5624238_26 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004717 342.0
BYD1_k127_5624238_27 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002038 328.0
BYD1_k127_5624238_28 amidohydrolase K07045 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 326.0
BYD1_k127_5624238_29 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 316.0
BYD1_k127_5624238_3 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 2.617e-278 867.0
BYD1_k127_5624238_30 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000895 316.0
BYD1_k127_5624238_31 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 314.0
BYD1_k127_5624238_32 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 300.0
BYD1_k127_5624238_33 fumarylacetoacetate (FAA) hydrolase K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003666 275.0
BYD1_k127_5624238_34 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000001467 263.0
BYD1_k127_5624238_35 Pyruvate ferredoxin/flavodoxin oxidoreductase K00172,K18357 - 1.2.1.58,1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002808 255.0
BYD1_k127_5624238_36 PFAM Appr-1-p processing domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001859 246.0
BYD1_k127_5624238_37 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008886 259.0
BYD1_k127_5624238_38 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000136 257.0
BYD1_k127_5624238_39 Peptidase C26 K01658 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000001886 258.0
BYD1_k127_5624238_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 4.648e-204 651.0
BYD1_k127_5624238_40 N-(5'phosphoribosyl)anthranilate (PRA) isomerase K01817 - 5.3.1.24 0.000000000000000000000000000000000000000000000000000000000000000000008599 255.0
BYD1_k127_5624238_41 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000000000000003058 237.0
BYD1_k127_5624238_42 LytTr DNA-binding domain K08083 - - 0.00000000000000000000000000000000000000000000000000000000000000005758 244.0
BYD1_k127_5624238_43 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000009239 229.0
BYD1_k127_5624238_44 Alpha beta hydrolase K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000000953 221.0
BYD1_k127_5624238_45 Ceramidase - - - 0.00000000000000000000000000000000000000000000000000000000002718 215.0
BYD1_k127_5624238_47 Thioesterase - - - 0.0000000000000000000000000000000000000000000000000000000564 214.0
BYD1_k127_5624238_48 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000001505 208.0
BYD1_k127_5624238_49 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000000000000002806 192.0
BYD1_k127_5624238_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 1.774e-201 658.0
BYD1_k127_5624238_50 Flagellar Assembly Protein A K09749 - - 0.000000000000000000000000000000000000000000000000004118 196.0
BYD1_k127_5624238_51 Methyl-transferase - - - 0.000000000000000000000000000000000000000000000000009488 191.0
BYD1_k127_5624238_52 Belongs to the P(II) protein family K04751 - - 0.00000000000000000000000000000000000000000000000005087 183.0
BYD1_k127_5624238_53 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000001365 186.0
BYD1_k127_5624238_54 Thioesterase-like superfamily K07107 - - 0.000000000000000000000000000000000000000000000000889 180.0
BYD1_k127_5624238_55 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000000007978 176.0
BYD1_k127_5624238_56 protein possibly involved in aromatic compounds catabolism K19222 - 3.1.2.28 0.0000000000000000000000000000000000000000000002198 171.0
BYD1_k127_5624238_57 - - - - 0.0000000000000000000000000000000000000000008938 172.0
BYD1_k127_5624238_58 lactoylglutathione lyase activity - - - 0.000000000000000000000000000000000000000001513 158.0
BYD1_k127_5624238_59 Uroporphyrinogen III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000001582 160.0
BYD1_k127_5624238_6 Trehalase K01194 - 3.2.1.28 1.353e-200 640.0
BYD1_k127_5624238_60 heme oxygenase (decyclizing) activity - - - 0.000000000000000000000000000000000000002507 153.0
BYD1_k127_5624238_61 RES - - - 0.0000000000000000000000000000000000001204 146.0
BYD1_k127_5624238_62 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000001471 149.0
BYD1_k127_5624238_63 Ferredoxin - - - 0.000000000000000000000000000000007929 137.0
BYD1_k127_5624238_64 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000001343 142.0
BYD1_k127_5624238_65 TIGRFAM 40-residue YVTN family beta-propeller repeat - - - 0.0000000000000000000000000000005823 136.0
BYD1_k127_5624238_66 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000000009591 118.0
BYD1_k127_5624238_67 Glutathione-dependent formaldehyde-activating - - - 0.0000000000000000000000000002251 125.0
BYD1_k127_5624238_68 COG3209 Rhs family protein - - - 0.000000000000000000000000003756 132.0
BYD1_k127_5624238_69 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000004198 128.0
BYD1_k127_5624238_7 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.566e-200 631.0
BYD1_k127_5624238_70 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000006594 118.0
BYD1_k127_5624238_71 Membrane fusogenic activity K09806 - - 0.000000000000000000003973 95.0
BYD1_k127_5624238_72 SCP-2 sterol transfer family - - - 0.00000000000000000002308 99.0
BYD1_k127_5624238_73 PA domain - - - 0.0000000000000000003389 103.0
BYD1_k127_5624238_74 self proteolysis - - - 0.0000000000007568 84.0
BYD1_k127_5624238_76 alginic acid biosynthetic process K09483 - 4.2.1.118 0.000000001745 70.0
BYD1_k127_5624238_77 Pyrrolo-quinoline quinone - - - 0.000000004561 70.0
BYD1_k127_5624238_78 Domain of unknown function (DUF4124) - - - 0.000000492 59.0
BYD1_k127_5624238_8 pyruvate flavodoxin ferredoxin oxidoreductase K00169 - 1.2.7.1 5.295e-200 632.0
BYD1_k127_5624238_80 Protein of unknown function (DUF2845) - - - 0.00002382 51.0
BYD1_k127_5624238_9 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 613.0
BYD1_k127_5644007_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 544.0
BYD1_k127_5644007_1 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 305.0
BYD1_k127_5644007_2 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003008 292.0
BYD1_k127_5644007_3 MlaD protein K02067,K06192 - - 0.000000000000000000000000000000000000001057 160.0
BYD1_k127_5644007_4 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000003289 102.0
BYD1_k127_5644007_5 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000003345 79.0
BYD1_k127_5781362_0 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 446.0
BYD1_k127_5781362_1 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 306.0
BYD1_k127_5781362_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003664 264.0
BYD1_k127_5781362_3 - - - - 0.000000000000000000000000000000000000000000000000000000000128 209.0
BYD1_k127_5781362_4 Succinylglutamate desuccinylase / Aspartoacylase family K06987 - - 0.000000000000000000000000000000000007244 150.0
BYD1_k127_5781362_5 LytTr DNA-binding domain K02477 - - 0.0000000000000142 78.0
BYD1_k127_5891106_0 ATPase activity K01990,K13926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002719 302.0
BYD1_k127_5891106_1 HlyD family secretion protein K01993 - - 0.000000000000000000000000000000000000000000000000001183 203.0
BYD1_k127_5891106_2 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000001085 158.0
BYD1_k127_5891106_3 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000002749 136.0
BYD1_k127_5891106_4 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000014 127.0
BYD1_k127_5974228_0 response regulator receiver K02487,K06596 - - 2e-323 1063.0
BYD1_k127_5974228_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 4.257e-222 709.0
BYD1_k127_5974228_10 Oxidoreductase FAD-binding domain K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 375.0
BYD1_k127_5974228_11 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 315.0
BYD1_k127_5974228_12 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000000000000006783 239.0
BYD1_k127_5974228_13 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000007445 226.0
BYD1_k127_5974228_14 response regulator receiver K02657 - - 0.0000000000000000000000000000000000000000000000000000000000003045 214.0
BYD1_k127_5974228_15 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000404 223.0
BYD1_k127_5974228_16 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.000000000000000000000000000000000000000000000000000000000003283 216.0
BYD1_k127_5974228_17 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.00000000000000000000000000000000000000000000000000000001905 205.0
BYD1_k127_5974228_18 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000001227 179.0
BYD1_k127_5974228_19 N-acetylmuramoyl-L-alanine amidase K01447 - 3.5.1.28 0.00000000000000000000000000000000000000003082 154.0
BYD1_k127_5974228_2 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 GO:0003674,GO:0003824,GO:0004015,GO:0005488,GO:0006082,GO:0006732,GO:0006766,GO:0006767,GO:0006768,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009102,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019752,GO:0019842,GO:0030170,GO:0032787,GO:0034641,GO:0036094,GO:0042364,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072330,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.6.1.62 1.158e-211 672.0
BYD1_k127_5974228_20 cheY-homologous receiver domain K02658 - - 0.00000000000000000000000000000000000000007279 155.0
BYD1_k127_5974228_21 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000005832 154.0
BYD1_k127_5974228_22 Peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000002608 144.0
BYD1_k127_5974228_23 Two component signalling adaptor domain K02659 - - 0.0000000000000000000000000000000004963 138.0
BYD1_k127_5974228_24 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000009792 123.0
BYD1_k127_5974228_25 integral membrane protein K02221 - - 0.00000000000000000000000003505 114.0
BYD1_k127_5974228_26 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.000000000000000000000001497 115.0
BYD1_k127_5974228_27 Two component signalling adaptor domain K06598 - - 0.000000000000000000002816 102.0
BYD1_k127_5974228_28 Belongs to the bacterial histone-like protein family - - - 0.0000000000000000003357 99.0
BYD1_k127_5974228_29 Belongs to the UPF0235 family K09131 - - 0.00000004114 58.0
BYD1_k127_5974228_3 Domain of unknown function (DUF4478) K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 584.0
BYD1_k127_5974228_4 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005009 563.0
BYD1_k127_5974228_5 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004401 528.0
BYD1_k127_5974228_6 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 482.0
BYD1_k127_5974228_7 twitching motility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000193 420.0
BYD1_k127_5974228_8 COG0840 Methyl-accepting chemotaxis protein K02660 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 412.0
BYD1_k127_5974228_9 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002677 377.0
BYD1_k127_6059364_0 Binding-protein-dependent transport system inner membrane component K02011 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 483.0
BYD1_k127_6059364_1 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007645 413.0
BYD1_k127_6059364_10 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000000003713 181.0
BYD1_k127_6059364_11 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000001576 167.0
BYD1_k127_6059364_12 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system - - - 0.000000000000000000000000000000000001532 147.0
BYD1_k127_6059364_2 Bacterial extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006329 406.0
BYD1_k127_6059364_3 receptor K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 387.0
BYD1_k127_6059364_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007711 325.0
BYD1_k127_6059364_5 Inositol monophosphatase family K05602 - 3.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006958 316.0
BYD1_k127_6059364_6 adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000003475 265.0
BYD1_k127_6059364_7 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000002659 248.0
BYD1_k127_6059364_8 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.0000000000000000000000000000000000000000000000000000000000003056 225.0
BYD1_k127_6059364_9 Pfam Periplasmic binding protein K02016,K06858 - - 0.0000000000000000000000000000000000000000000000000000325 201.0
BYD1_k127_6154102_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005377 606.0
BYD1_k127_6154102_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 600.0
BYD1_k127_6154102_10 stringent starvation protein b K03600 - - 0.000000000000000000000000000000000007625 139.0
BYD1_k127_6154102_11 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.0000000000000000002237 100.0
BYD1_k127_6154102_12 Belongs to the BolA IbaG family - - - 0.000000000000000001547 87.0
BYD1_k127_6154102_13 Belongs to the UPF0102 family K07460 - - 0.000000000000000002294 97.0
BYD1_k127_6154102_14 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000005763 70.0
BYD1_k127_6154102_15 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.00001215 55.0
BYD1_k127_6154102_2 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000289 437.0
BYD1_k127_6154102_3 abc transporter atp-binding protein K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005128 349.0
BYD1_k127_6154102_4 Belongs to the peptidase S1C family K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 323.0
BYD1_k127_6154102_5 PFAM LppC K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000101 268.0
BYD1_k127_6154102_6 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000004422 254.0
BYD1_k127_6154102_7 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000002295 245.0
BYD1_k127_6154102_8 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000003241 235.0
BYD1_k127_6154102_9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.000000000000000000000000000000000000001312 153.0
BYD1_k127_6375445_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 1.856e-276 862.0
BYD1_k127_6375445_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 GO:0003674,GO:0003824,GO:0006082,GO:0006464,GO:0006520,GO:0006541,GO:0006542,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008773,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019538,GO:0019752,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044283,GO:0046394,GO:0070569,GO:0071704,GO:0140096,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.7.59 3.303e-262 835.0
BYD1_k127_6375445_10 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006153 439.0
BYD1_k127_6375445_11 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 404.0
BYD1_k127_6375445_12 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 389.0
BYD1_k127_6375445_13 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 384.0
BYD1_k127_6375445_14 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003137 378.0
BYD1_k127_6375445_15 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009693 370.0
BYD1_k127_6375445_16 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003194 349.0
BYD1_k127_6375445_17 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 354.0
BYD1_k127_6375445_18 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004848 338.0
BYD1_k127_6375445_19 Histidine kinase K07636 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 335.0
BYD1_k127_6375445_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 3.921e-199 650.0
BYD1_k127_6375445_20 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001583 323.0
BYD1_k127_6375445_21 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005085,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0019899,GO:0034641,GO:0034645,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0051020,GO:0065007,GO:0065009,GO:0071704,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004584 316.0
BYD1_k127_6375445_22 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 306.0
BYD1_k127_6375445_23 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002175 305.0
BYD1_k127_6375445_24 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005543 273.0
BYD1_k127_6375445_25 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000001714 224.0
BYD1_k127_6375445_26 DNA polymerase III, alpha subunit K02337 GO:0003674,GO:0003824,GO:0003887,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009360,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032991,GO:0034061,GO:0034641,GO:0034645,GO:0034654,GO:0042575,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044776,GO:0046483,GO:0061695,GO:0071704,GO:0071897,GO:0090304,GO:0140097,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000001959 214.0
BYD1_k127_6375445_27 Forkhead associated domain - - - 0.000000000000000000000000000000000000000000000000000000002823 211.0
BYD1_k127_6375445_28 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000001866 213.0
BYD1_k127_6375445_29 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000208 211.0
BYD1_k127_6375445_3 Helicase K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 614.0
BYD1_k127_6375445_30 Belongs to the CDS family K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000002223 205.0
BYD1_k127_6375445_31 PFAM Peptidase M22, glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000009322 211.0
BYD1_k127_6375445_32 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000001698 193.0
BYD1_k127_6375445_33 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000005909 136.0
BYD1_k127_6375445_34 Belongs to the skp family K06142 - - 0.00000000000000000000004566 106.0
BYD1_k127_6375445_35 Transposase IS200 like - - - 0.0000000001154 74.0
BYD1_k127_6375445_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003283 604.0
BYD1_k127_6375445_5 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 473.0
BYD1_k127_6375445_6 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004134 470.0
BYD1_k127_6375445_7 Binding-protein-dependent transport system inner membrane component K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 434.0
BYD1_k127_6375445_8 zinc metalloprotease K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 434.0
BYD1_k127_6375445_9 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 420.0
BYD1_k127_6398805_0 Elongator protein 3, MiaB family, Radical SAM K11779 - 2.5.1.77 6.321e-315 983.0
BYD1_k127_6398805_1 PFAM NADH flavin oxidoreductase NADH oxidase K00219,K09461 - 1.14.13.40,1.3.1.34 6.449e-302 943.0
BYD1_k127_6398805_10 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 2.169e-204 648.0
BYD1_k127_6398805_100 DNA-templated transcription, initiation K03088,K03091 - - 0.000000000000000000000000005399 118.0
BYD1_k127_6398805_101 - - - - 0.000000000000000000000000005639 128.0
BYD1_k127_6398805_102 Rieske-like [2Fe-2S] domain - - - 0.0000000000000000000000001401 111.0
BYD1_k127_6398805_103 Pathogenicity locus - - - 0.000000000000000000003867 100.0
BYD1_k127_6398805_104 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000002197 96.0
BYD1_k127_6398805_105 Pilus assembly protein, PilP - - - 0.0000000000000000558 96.0
BYD1_k127_6398805_106 Antibiotic biosynthesis monooxygenase K11530 - 5.3.1.32 0.0000000000000004998 82.0
BYD1_k127_6398805_107 - - - - 0.0000000000000397 75.0
BYD1_k127_6398805_108 PFAM Carboxymuconolactone decarboxylase - - - 0.000000000005954 74.0
BYD1_k127_6398805_109 - - - - 0.00000000004162 69.0
BYD1_k127_6398805_11 Type II secretory pathway, component HofQ K02666 - - 4.565e-198 640.0
BYD1_k127_6398805_111 Domain of unknown function (DUF4440) - - - 0.00000002007 63.0
BYD1_k127_6398805_112 Belongs to the UPF0312 family K12262 - - 0.0001351 46.0
BYD1_k127_6398805_12 TonB dependent receptor - - - 3.858e-197 645.0
BYD1_k127_6398805_13 PQQ-like domain K05889 - 1.1.2.6 3.148e-194 636.0
BYD1_k127_6398805_14 AMP-dependent synthetase and ligase K00666 - - 5.266e-194 623.0
BYD1_k127_6398805_15 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003369 629.0
BYD1_k127_6398805_16 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 602.0
BYD1_k127_6398805_17 gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005351 602.0
BYD1_k127_6398805_18 Acyl-CoA dehydrogenase, C-terminal domain K18244 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003054 575.0
BYD1_k127_6398805_19 Acetyl-CoA acetyltransferase K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001474 568.0
BYD1_k127_6398805_2 Dehydrogenase - - - 2.357e-285 898.0
BYD1_k127_6398805_20 COG0183 Acetyl-CoA acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 554.0
BYD1_k127_6398805_21 COG1053 Succinate dehydrogenase fumarate reductase, flavoprotein subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003516 582.0
BYD1_k127_6398805_22 Luciferase-like monooxygenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007233 529.0
BYD1_k127_6398805_23 MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000155 542.0
BYD1_k127_6398805_24 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000389 514.0
BYD1_k127_6398805_25 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006278 525.0
BYD1_k127_6398805_26 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 482.0
BYD1_k127_6398805_27 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 484.0
BYD1_k127_6398805_28 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008499 474.0
BYD1_k127_6398805_29 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 469.0
BYD1_k127_6398805_3 Cytochrome C and Quinol oxidase polypeptide I K02274 - 1.9.3.1 4.715e-253 790.0
BYD1_k127_6398805_30 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 445.0
BYD1_k127_6398805_31 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 446.0
BYD1_k127_6398805_32 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 406.0
BYD1_k127_6398805_33 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 405.0
BYD1_k127_6398805_34 Enoyl-CoA hydratase/isomerase K01661,K07536 - 4.1.3.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 385.0
BYD1_k127_6398805_35 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 379.0
BYD1_k127_6398805_36 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 376.0
BYD1_k127_6398805_37 Uncharacterised protein family UPF0052 K11212 - 2.7.8.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 383.0
BYD1_k127_6398805_38 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005223 369.0
BYD1_k127_6398805_39 Zn-dependent protease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 371.0
BYD1_k127_6398805_4 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K02182 GO:0003674,GO:0003824,GO:0016405,GO:0016874,GO:0016877,GO:0016879,GO:0016881,GO:0051108,GO:0051109 6.2.1.48 4.203e-241 767.0
BYD1_k127_6398805_40 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016072,GO:0016075,GO:0019439,GO:0034641,GO:0034655,GO:0034660,GO:0034661,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:1901360,GO:1901361,GO:1901575 2.7.7.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 338.0
BYD1_k127_6398805_41 CHAT domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008692 353.0
BYD1_k127_6398805_42 Subtilase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 329.0
BYD1_k127_6398805_43 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 304.0
BYD1_k127_6398805_44 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007979 304.0
BYD1_k127_6398805_45 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004639 297.0
BYD1_k127_6398805_46 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019,K07535 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003874 297.0
BYD1_k127_6398805_47 NAD dependent epimerase/dehydratase family K00065 - 1.1.1.127 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007165 297.0
BYD1_k127_6398805_48 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 295.0
BYD1_k127_6398805_49 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007085 293.0
BYD1_k127_6398805_5 Activates fatty acids by binding to coenzyme A K01897 - 6.2.1.3 9.671e-226 712.0
BYD1_k127_6398805_50 membrane protein (homolog of Drosophila rhomboid) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 287.0
BYD1_k127_6398805_51 F420-0:Gamma-glutamyl ligase K12234 - 6.3.2.31,6.3.2.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001179 297.0
BYD1_k127_6398805_52 Pyridoxamine 5'-phosphate oxidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001371 282.0
BYD1_k127_6398805_53 Enoyl-(Acyl carrier protein) reductase K05296 - 1.1.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009389 279.0
BYD1_k127_6398805_54 Esterase PHB depolymerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003443 274.0
BYD1_k127_6398805_55 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001599 263.0
BYD1_k127_6398805_56 PFAM cytochrome c oxidase subunit II K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000002081 256.0
BYD1_k127_6398805_57 PFAM YicC-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002439 263.0
BYD1_k127_6398805_58 TonB-dependent receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000001087 259.0
BYD1_k127_6398805_59 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000001753 229.0
BYD1_k127_6398805_6 Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH K00033 - 1.1.1.343,1.1.1.44 8.659e-221 693.0
BYD1_k127_6398805_60 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000003326 224.0
BYD1_k127_6398805_61 COG2755 Lysophospholipase L1 and related esterases K10804 GO:0003674,GO:0003824,GO:0004620,GO:0004622,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016289,GO:0016290,GO:0016298,GO:0016787,GO:0016788,GO:0016790,GO:0019538,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0047617,GO:0052689,GO:0071704,GO:0140096,GO:1901564 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000148 216.0
BYD1_k127_6398805_62 MOSC N-terminal beta barrel domain K07140 - - 0.0000000000000000000000000000000000000000000000000000000004731 211.0
BYD1_k127_6398805_63 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.000000000000000000000000000000000000000000000000000000003719 203.0
BYD1_k127_6398805_64 N-terminal half of MaoC dehydratase K09709 - 4.2.1.153 0.00000000000000000000000000000000000000000000000000000001895 200.0
BYD1_k127_6398805_65 Protein of unknown function (DUF938) - - - 0.0000000000000000000000000000000000000000000000000000001014 224.0
BYD1_k127_6398805_66 Pilus assembly protein PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000001471 210.0
BYD1_k127_6398805_67 - - - - 0.000000000000000000000000000000000000000000000000000002496 198.0
BYD1_k127_6398805_68 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000000000000000000006587 195.0
BYD1_k127_6398805_69 6-phosphogluconolactonase K00851,K01057 - 2.7.1.12,3.1.1.31 0.0000000000000000000000000000000000000000000000000001337 194.0
BYD1_k127_6398805_7 TIGRFAM penicillin-binding protein, 1A K05366 - 2.4.1.129,3.4.16.4 3.041e-217 704.0
BYD1_k127_6398805_70 signal sequence binding K07152 - - 0.0000000000000000000000000000000000000000000000000005939 195.0
BYD1_k127_6398805_71 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000008403 190.0
BYD1_k127_6398805_72 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000005467 190.0
BYD1_k127_6398805_73 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.0000000000000000000000000000000000000000000000002601 181.0
BYD1_k127_6398805_74 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000003855 196.0
BYD1_k127_6398805_75 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000003581 188.0
BYD1_k127_6398805_76 Coenzyme A transferase K01039 - 2.8.3.12 0.00000000000000000000000000000000000000000000000466 183.0
BYD1_k127_6398805_77 AntiSigma factor - - - 0.000000000000000000000000000000000000000000000005472 188.0
BYD1_k127_6398805_78 SnoaL-like domain - - - 0.00000000000000000000000000000000000000000000001229 182.0
BYD1_k127_6398805_79 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000003024 181.0
BYD1_k127_6398805_8 FtsX-like permease family K02004 - - 5.619e-216 707.0
BYD1_k127_6398805_80 salt-induced outer membrane protein K07283 - - 0.00000000000000000000000000000000000000000000003289 179.0
BYD1_k127_6398805_81 Coenzyme A transferase K01040 - 2.8.3.12 0.000000000000000000000000000000000000000000002279 179.0
BYD1_k127_6398805_82 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000000003066 169.0
BYD1_k127_6398805_83 PFAM Fimbrial assembly K02663 - - 0.00000000000000000000000000000000000000000004227 168.0
BYD1_k127_6398805_84 N-terminal domain of Peptidase_S41 in eukaryotic IRBP - - - 0.0000000000000000000000000000000000000000001173 173.0
BYD1_k127_6398805_85 proteolysis - - - 0.0000000000000000000000000000000000000000002112 169.0
BYD1_k127_6398805_86 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000001103 175.0
BYD1_k127_6398805_87 PFAM regulatory protein, MarR - - - 0.000000000000000000000000000000000000000001315 179.0
BYD1_k127_6398805_88 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000008582 171.0
BYD1_k127_6398805_89 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity - - - 0.0000000000000000000000000000000000000009689 154.0
BYD1_k127_6398805_9 Ring hydroxylating alpha subunit (catalytic domain) K08689 - 1.14.12.18 1.966e-205 651.0
BYD1_k127_6398805_90 Phosphoglycerate mutase family K08296 - - 0.000000000000000000000000000000000000001759 164.0
BYD1_k127_6398805_91 pilus assembly protein pilp K02665 - - 0.00000000000000000000000000000000000003176 159.0
BYD1_k127_6398805_92 Guanylyltransferase that catalyzes the activation of 2- phospho-L-lactate (LP) as (2S)-lactyl-2-diphospho-5'-guanosine (LPPG), via the condensation of LP with GTP. Is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor K14941 - 2.7.7.68 0.0000000000000000000000000000000000001146 151.0
BYD1_k127_6398805_93 - - - - 0.0000000000000000000000000000000000013 142.0
BYD1_k127_6398805_94 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000008618 142.0
BYD1_k127_6398805_95 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000000000000002522 126.0
BYD1_k127_6398805_96 50S ribosomal protein L31 K02909 - - 0.0000000000000000000000000002467 116.0
BYD1_k127_6398805_97 oxygen carrier activity K07216 - - 0.0000000000000000000000000003247 121.0
BYD1_k127_6398805_98 DUF35 OB-fold domain, acyl-CoA-associated K07068 - - 0.0000000000000000000000000003352 130.0
BYD1_k127_6398805_99 - - - - 0.00000000000000000000000000384 115.0
BYD1_k127_6425013_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 1.936e-200 632.0
BYD1_k127_6425013_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 589.0
BYD1_k127_6425013_10 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003939 334.0
BYD1_k127_6425013_11 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 329.0
BYD1_k127_6425013_12 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002933 338.0
BYD1_k127_6425013_13 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000000000000000001096 195.0
BYD1_k127_6425013_14 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000000001313 164.0
BYD1_k127_6425013_15 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000005391 86.0
BYD1_k127_6425013_16 - - - - 0.00000000003382 71.0
BYD1_k127_6425013_2 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005597 556.0
BYD1_k127_6425013_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008963,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016740,GO:0016772,GO:0016780,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 507.0
BYD1_k127_6425013_4 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0032153,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034622,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044464,GO:0051258,GO:0051301,GO:0065003,GO:0071840,GO:0097159,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006548 483.0
BYD1_k127_6425013_5 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 452.0
BYD1_k127_6425013_6 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008663 424.0
BYD1_k127_6425013_7 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 403.0
BYD1_k127_6425013_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 381.0
BYD1_k127_6425013_9 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 376.0
BYD1_k127_6443047_0 Outer membrane receptor - - - 1.064e-284 913.0
BYD1_k127_6443047_1 Belongs to the GMC oxidoreductase family - - - 3.54e-212 676.0
BYD1_k127_6443047_10 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001185 285.0
BYD1_k127_6443047_11 PFAM transferase hexapeptide repeat containing protein K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000002032 256.0
BYD1_k127_6443047_12 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000000000000000000000000003513 255.0
BYD1_k127_6443047_13 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000000000000000000000000000000000001119 197.0
BYD1_k127_6443047_14 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000002277 179.0
BYD1_k127_6443047_15 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000003504 175.0
BYD1_k127_6443047_16 Glycosyl transferase, family 2 K13693 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006011,GO:0006139,GO:0006725,GO:0006793,GO:0006807,GO:0008150,GO:0008152,GO:0009225,GO:0009987,GO:0016740,GO:0016757,GO:0016758,GO:0034641,GO:0040007,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046872,GO:0046983,GO:0055086,GO:0071704,GO:1901135,GO:1901360 2.4.1.266 0.0000000000000000000000000000000000000000003852 168.0
BYD1_k127_6443047_17 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000003024 130.0
BYD1_k127_6443047_18 - - - - 0.0000000000000000000000000000004652 130.0
BYD1_k127_6443047_19 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000003936 113.0
BYD1_k127_6443047_2 Protein of unknown function (DUF1343) - - - 2.573e-204 647.0
BYD1_k127_6443047_20 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.0000000000000000001883 87.0
BYD1_k127_6443047_21 Membrane K08983 - - 0.000000000000000226 89.0
BYD1_k127_6443047_22 - - - - 0.000000000000001371 85.0
BYD1_k127_6443047_24 Belongs to the Ca(2 ) cation antiporter (CaCA) (TC 2.A.19) family K05849 - - 0.000000000005177 79.0
BYD1_k127_6443047_25 - - - - 0.000000002441 58.0
BYD1_k127_6443047_26 PilZ domain - - - 0.000000004841 61.0
BYD1_k127_6443047_3 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 434.0
BYD1_k127_6443047_4 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 433.0
BYD1_k127_6443047_5 Alkaline phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 409.0
BYD1_k127_6443047_6 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006508 364.0
BYD1_k127_6443047_7 Protein kinase domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 368.0
BYD1_k127_6443047_8 Periplasmic solute binding protein K02077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002567 342.0
BYD1_k127_6443047_9 ABC-3 protein K02075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001914 281.0
BYD1_k127_6725378_0 Bacterial protein of unknown function (DUF839) K07093 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002408 404.0
BYD1_k127_6725378_1 Protein of unknown function (DUF1203) - - - 0.000000000000000000000000000000000000001237 154.0
BYD1_k127_6725378_2 Protein of unknown function (DUF1232) - - - 0.000000000000000000000000001884 115.0
BYD1_k127_6725378_3 Peptidase family M1 domain - - - 0.00000000000003681 85.0
BYD1_k127_6736160_0 protein conserved in bacteria K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 546.0
BYD1_k127_6736160_1 Acts as a magnesium transporter K06213 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 501.0
BYD1_k127_6736160_2 AAA domain (Cdc48 subfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 458.0
BYD1_k127_6736160_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 429.0
BYD1_k127_6736160_4 Modulates the synthesis of GlmS, by affecting the processing and stability of the regulatory small RNA GlmZ. When glucosamine-6-phosphate (GlcN6P) concentrations are high in the cell, RapZ binds GlmZ and targets it to cleavage by RNase E. Consequently, GlmZ is inactivated and unable to activate GlmS synthesis. Under low GlcN6P concentrations, RapZ is sequestered and inactivated by an other regulatory small RNA, GlmY, preventing GlmZ degradation and leading to synthesis of GlmS K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 313.0
BYD1_k127_6736160_5 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006358 295.0
BYD1_k127_6736160_6 abc transporter atp-binding protein K06861 - - 0.000000000000000000000000000000000000000000000000000004108 192.0
BYD1_k127_6736160_7 Redoxin K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000008117 193.0
BYD1_k127_6736160_8 Sigma 54 modulation protein K05808 - - 0.00000000000000000000000000000000007242 139.0
BYD1_k127_6911568_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.05e-232 743.0
BYD1_k127_6911568_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 562.0
BYD1_k127_6911568_10 CBS domain - - - 0.000000000000000000000000000000000000000000000000000000000001161 227.0
BYD1_k127_6911568_11 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.000000000000000000000000000000000000000000000005998 178.0
BYD1_k127_6911568_12 binds to the 23S rRNA K02939 - - 0.000000000000000000000000000000000000000000001237 173.0
BYD1_k127_6911568_13 Evidence 4 Homologs of previously reported genes of K09700 - - 0.0000000000000000000000000000000000000000008436 171.0
BYD1_k127_6911568_14 cytochrome C assembly protein - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000002322 166.0
BYD1_k127_6911568_15 MAPEG family - - - 0.000000000000000000000000000000000002623 145.0
BYD1_k127_6911568_16 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000003153 130.0
BYD1_k127_6911568_17 MAPEG family - - - 0.00000000000000000004099 98.0
BYD1_k127_6911568_18 - - - - 0.00000000000003585 74.0
BYD1_k127_6911568_19 PFAM Lysine exporter protein (LYSE YGGA) - - - 0.0000000000001095 81.0
BYD1_k127_6911568_2 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 520.0
BYD1_k127_6911568_20 membrane - - - 0.00000005536 64.0
BYD1_k127_6911568_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006612,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032991,GO:0033036,GO:0034613,GO:0035639,GO:0036094,GO:0042886,GO:0043167,GO:0043168,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046907,GO:0048500,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0090150,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1990904 3.6.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 521.0
BYD1_k127_6911568_4 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 353.0
BYD1_k127_6911568_5 phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 296.0
BYD1_k127_6911568_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000005898 267.0
BYD1_k127_6911568_7 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000001929 271.0
BYD1_k127_6911568_8 ADP-glyceromanno-heptose 6-epimerase activity K01710,K01784 - 4.2.1.46,5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000005024 259.0
BYD1_k127_6911568_9 (FHA) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000004379 227.0
BYD1_k127_6946626_0 Protein export membrane protein - - - 0.0 1519.0
BYD1_k127_6946626_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner - - - 0.0 1033.0
BYD1_k127_6946626_10 Pyrimidine nucleoside phosphorylase C-terminal domain K00758 - 2.4.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 464.0
BYD1_k127_6946626_11 Multidrug ABC transporter ATP-binding protein K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 446.0
BYD1_k127_6946626_12 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001016 447.0
BYD1_k127_6946626_13 malic enzyme K00027,K00029 - 1.1.1.38,1.1.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 447.0
BYD1_k127_6946626_14 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006501 434.0
BYD1_k127_6946626_15 Belongs to the DEAD box helicase family K11927 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 450.0
BYD1_k127_6946626_16 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 403.0
BYD1_k127_6946626_17 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000392 396.0
BYD1_k127_6946626_18 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 382.0
BYD1_k127_6946626_19 Dehydrogenase K15054 - 1.1.99.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 371.0
BYD1_k127_6946626_2 TonB dependent receptor K02014 - - 8.736e-309 961.0
BYD1_k127_6946626_20 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 358.0
BYD1_k127_6946626_21 Saccharopine dehydrogenase NADP binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 375.0
BYD1_k127_6946626_22 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 361.0
BYD1_k127_6946626_23 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008901 342.0
BYD1_k127_6946626_24 Outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 346.0
BYD1_k127_6946626_25 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 GO:0000150,GO:0000976,GO:0000984,GO:0000985,GO:0000988,GO:0000990,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006259,GO:0006310,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009009,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031421,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000261 334.0
BYD1_k127_6946626_26 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 338.0
BYD1_k127_6946626_27 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008155 331.0
BYD1_k127_6946626_28 Formamidopyrimidine-DNA glycosylase H2TH domain K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 326.0
BYD1_k127_6946626_29 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 324.0
BYD1_k127_6946626_3 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 7.463e-223 705.0
BYD1_k127_6946626_30 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 - 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 336.0
BYD1_k127_6946626_31 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003178 301.0
BYD1_k127_6946626_32 PFAM Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 312.0
BYD1_k127_6946626_33 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000887 301.0
BYD1_k127_6946626_34 COG1073 Hydrolases of the alpha beta superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009741 306.0
BYD1_k127_6946626_35 PFAM LemA family protein K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005539 279.0
BYD1_k127_6946626_36 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 GO:0000287,GO:0003674,GO:0003824,GO:0004588,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001073 271.0
BYD1_k127_6946626_37 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001769 274.0
BYD1_k127_6946626_38 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000742 269.0
BYD1_k127_6946626_39 Putative methyltransferase K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000003024 270.0
BYD1_k127_6946626_4 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 1.487e-221 696.0
BYD1_k127_6946626_40 Phosphorylase superfamily K03784 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002716 276.0
BYD1_k127_6946626_41 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000001226 246.0
BYD1_k127_6946626_42 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000001392 245.0
BYD1_k127_6946626_43 Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate K01619 - 4.1.2.4 0.0000000000000000000000000000000000000000000000000000000000000000001405 239.0
BYD1_k127_6946626_44 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 GO:0000166,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019103,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0022607,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0051259,GO:0051260,GO:0055086,GO:0065003,GO:0070206,GO:0070207,GO:0071704,GO:0071840,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901136,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000009466 233.0
BYD1_k127_6946626_45 Lipoprotein - - - 0.000000000000000000000000000000000000000000000000000000000004482 214.0
BYD1_k127_6946626_46 Protein of unknown function (DUF1318) - - - 0.000000000000000000000000000000000000000000000000000000000005648 214.0
BYD1_k127_6946626_47 Steryl acetyl hydrolase K14731 - 3.1.1.83 0.0000000000000000000000000000000000000000000000000000000000917 214.0
BYD1_k127_6946626_48 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0008990,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0052913,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.171 0.0000000000000000000000000000000000000000000000000000003266 199.0
BYD1_k127_6946626_49 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000000001483 198.0
BYD1_k127_6946626_5 FAD dependent oxidoreductase K07077 - - 1.919e-211 669.0
BYD1_k127_6946626_50 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000003518 193.0
BYD1_k127_6946626_51 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0005488,GO:0005515,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000006193 203.0
BYD1_k127_6946626_52 Protein of unknown function (DUF1428) K01077 - 3.1.3.1 0.0000000000000000000000000000000000000000000000007048 177.0
BYD1_k127_6946626_53 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000000001614 187.0
BYD1_k127_6946626_54 TPM domain - - - 0.00000000000000000000000000000000000000000003382 178.0
BYD1_k127_6946626_55 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.0000000000000000000000000000000000000000001266 170.0
BYD1_k127_6946626_56 PFAM Glycerophosphoryl diester phosphodiesterase K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000005462 169.0
BYD1_k127_6946626_57 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000003437 162.0
BYD1_k127_6946626_58 YCII-related domain - - - 0.0000000000000000000000000000000000000003109 153.0
BYD1_k127_6946626_59 Archease protein family (MTH1598/TM1083) - - - 0.0000000000000000000000000000000000000007611 164.0
BYD1_k127_6946626_6 Major facilitator superfamily K08218 - - 1.042e-207 661.0
BYD1_k127_6946626_60 receiver - - - 0.000000000000000000000000000000000000000826 164.0
BYD1_k127_6946626_61 Phosphorylase superfamily K01243 - 3.2.2.9 0.000000000000000000000000000000000000001275 155.0
BYD1_k127_6946626_62 YCII-related domain - - - 0.0000000000000000000000000000000000003777 146.0
BYD1_k127_6946626_63 Hsp20/alpha crystallin family - - - 0.000000000000000000000000000000000002903 143.0
BYD1_k127_6946626_64 transcriptional - - - 0.0000000000000000000000000000001134 130.0
BYD1_k127_6946626_65 Putative adhesin - - - 0.000000000000000000000000000002503 131.0
BYD1_k127_6946626_66 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000131 117.0
BYD1_k127_6946626_67 YCII-related domain - - - 0.000000000000000000000000003827 114.0
BYD1_k127_6946626_68 This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis K01489 - 3.5.4.5 0.00000000000000000000000005819 115.0
BYD1_k127_6946626_69 Domain of unknown function (DUF4124) - - - 0.000000000000000000000005575 110.0
BYD1_k127_6946626_7 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 2.113e-196 627.0
BYD1_k127_6946626_70 Protein of unknown function (DUF2892) - - - 0.0000000000000000000001536 102.0
BYD1_k127_6946626_71 there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc K02913 - - 0.000000000000000000004107 94.0
BYD1_k127_6946626_72 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000008425 105.0
BYD1_k127_6946626_73 Peptidoglycan-binding domain 1 protein - - - 0.00000000000001245 81.0
BYD1_k127_6946626_74 Protein involved in outer membrane biogenesis K07289 - - 0.00000000008844 74.0
BYD1_k127_6946626_75 EF-hand domain pair - - - 0.000000006635 61.0
BYD1_k127_6946626_76 peptidase C14 caspase catalytic subunit p20 - - - 0.000001127 59.0
BYD1_k127_6946626_77 - - - - 0.000009981 56.0
BYD1_k127_6946626_8 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 569.0
BYD1_k127_6946626_9 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 484.0
BYD1_k127_6979271_0 Prokaryotic glutathione synthetase, ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 0.0 1530.0
BYD1_k127_6979271_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1140.0
BYD1_k127_6979271_10 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002889 310.0
BYD1_k127_6979271_11 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005781 294.0
BYD1_k127_6979271_12 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 286.0
BYD1_k127_6979271_13 KR domain K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000001162 272.0
BYD1_k127_6979271_14 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004946 282.0
BYD1_k127_6979271_15 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000001052 180.0
BYD1_k127_6979271_16 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.00000000000000000000000000000000000009125 145.0
BYD1_k127_6979271_17 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000006118 148.0
BYD1_k127_6979271_18 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000008633 101.0
BYD1_k127_6979271_19 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000002438 90.0
BYD1_k127_6979271_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 9.504e-241 759.0
BYD1_k127_6979271_3 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 555.0
BYD1_k127_6979271_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 543.0
BYD1_k127_6979271_5 Mur ligase family, glutamate ligase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002126 522.0
BYD1_k127_6979271_6 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 445.0
BYD1_k127_6979271_7 Peptidase family S51 K13282 - 3.4.15.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003014 407.0
BYD1_k127_6979271_8 Belongs to the peptidase S1C family K04691,K04771,K04772 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004043 411.0
BYD1_k127_6979271_9 NAD-dependent epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006887 323.0
BYD1_k127_7201347_0 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 429.0
BYD1_k127_7201347_1 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000005375 107.0
BYD1_k127_7201347_2 PAS fold - - - 0.0000003603 59.0
BYD1_k127_7423680_0 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006547,GO:0006548,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009987,GO:0016054,GO:0016153,GO:0016829,GO:0016835,GO:0016836,GO:0019439,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046395,GO:0046483,GO:0046700,GO:0052803,GO:0052805,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 4.2.1.49 1.46e-291 902.0
BYD1_k127_7423680_1 TonB dependent receptor - - - 4.979e-255 819.0
BYD1_k127_7423680_10 Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 408.0
BYD1_k127_7423680_11 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 394.0
BYD1_k127_7423680_12 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008784 365.0
BYD1_k127_7423680_13 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 354.0
BYD1_k127_7423680_14 Predicted membrane protein (DUF2238) K08984 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005107 344.0
BYD1_k127_7423680_15 PFAM FAD linked oxidase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 338.0
BYD1_k127_7423680_16 Secreted protein, containing von Willebrand factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005539 328.0
BYD1_k127_7423680_17 KR domain K10780 - 1.3.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 308.0
BYD1_k127_7423680_18 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 307.0
BYD1_k127_7423680_19 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006348 293.0
BYD1_k127_7423680_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 639.0
BYD1_k127_7423680_20 von Willebrand factor (VWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000579 287.0
BYD1_k127_7423680_21 COG0811 Biopolymer transport proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000016 281.0
BYD1_k127_7423680_22 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000132 283.0
BYD1_k127_7423680_23 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000722 275.0
BYD1_k127_7423680_24 COG0189 Glutathione synthase Ribosomal protein S6 modification enzyme (glutaminyl transferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001211 272.0
BYD1_k127_7423680_25 Belongs to the pseudouridine synthase RsuA family K06178,K06181 - 5.4.99.20,5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000004171 239.0
BYD1_k127_7423680_26 with different specificities (related to short-chain alcohol K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000001406 229.0
BYD1_k127_7423680_27 - - - - 0.0000000000000000000000000000000000000000000000000000000008646 208.0
BYD1_k127_7423680_28 lipid A biosynthesis K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000006287 213.0
BYD1_k127_7423680_29 - - - - 0.00000000000000000000000000000000000000000000000002546 188.0
BYD1_k127_7423680_3 Catalyzes the degradation of histidine to urocanate and ammmonia K01745 - 4.3.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007986 610.0
BYD1_k127_7423680_30 Bacterial protein of unknown function (DUF882) - - - 0.000000000000000000000000000000000000000000000002162 181.0
BYD1_k127_7423680_31 - - - - 0.000000000000000000000000000000000000000000002693 185.0
BYD1_k127_7423680_32 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000005046 176.0
BYD1_k127_7423680_33 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000004221 171.0
BYD1_k127_7423680_34 Phosphopantetheine attachment site - - - 0.00000000000000000000000000000000000017 145.0
BYD1_k127_7423680_35 Protein of unknown function (DUF1272) K09984 - - 0.000000000000000000000000000000003481 130.0
BYD1_k127_7423680_36 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000007181 144.0
BYD1_k127_7423680_37 - - - - 0.000000000000000000000000000004547 137.0
BYD1_k127_7423680_38 OmpA family K03286 - - 0.0000000000000000000000000003759 133.0
BYD1_k127_7423680_39 FabA-like domain - - - 0.0000000000000000000000007688 114.0
BYD1_k127_7423680_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001853 487.0
BYD1_k127_7423680_40 - - - - 0.00000000000000000004015 107.0
BYD1_k127_7423680_41 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.00000000000000000006446 95.0
BYD1_k127_7423680_42 - - - - 0.000000000000000808 90.0
BYD1_k127_7423680_43 - - - - 0.000000000000007792 87.0
BYD1_k127_7423680_44 Bacterial protein of unknown function (DUF883) - - - 0.0000000000002336 75.0
BYD1_k127_7423680_45 - - - - 0.000000000009776 71.0
BYD1_k127_7423680_46 PKD domain containing protein K01179 - 3.2.1.4 0.00000000004516 73.0
BYD1_k127_7423680_47 UPF0391 membrane protein - - - 0.000000000368 69.0
BYD1_k127_7423680_49 VanZ like family - - - 0.00002125 56.0
BYD1_k127_7423680_5 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006833 483.0
BYD1_k127_7423680_50 - - - - 0.0003928 52.0
BYD1_k127_7423680_51 - - - - 0.0006068 47.0
BYD1_k127_7423680_6 Imidazolone-5-propionate hydrolase K01468 - 3.5.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000063 470.0
BYD1_k127_7423680_7 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000807 479.0
BYD1_k127_7423680_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00647,K09458 - 2.3.1.179,2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 464.0
BYD1_k127_7423680_9 Adenosine/AMP deaminase K01488 - 3.5.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 455.0
BYD1_k127_7474735_0 N-methylhydantoinase A acetone carboxylase, beta subunit K01469 - 3.5.2.9 0.0 1274.0
BYD1_k127_7474735_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 5.514e-271 842.0
BYD1_k127_7474735_10 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 524.0
BYD1_k127_7474735_11 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000167 512.0
BYD1_k127_7474735_12 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002912 477.0
BYD1_k127_7474735_13 Peptidase family M13 K07386 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 443.0
BYD1_k127_7474735_14 Protein of unknown function (DUF1302) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 420.0
BYD1_k127_7474735_15 Cupin superfamily protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005257 388.0
BYD1_k127_7474735_16 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 387.0
BYD1_k127_7474735_17 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 359.0
BYD1_k127_7474735_18 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 357.0
BYD1_k127_7474735_19 protein involved in response to NO K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 340.0
BYD1_k127_7474735_2 MMPL family K07003 - - 2.356e-243 781.0
BYD1_k127_7474735_20 Phage tail sheath C-terminal domain K06907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 336.0
BYD1_k127_7474735_21 mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 320.0
BYD1_k127_7474735_22 TIGRFAM 3'(2'),5'-bisphosphate nucleotidase K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000377 310.0
BYD1_k127_7474735_23 Ribosomal protein L11 methyltransferase K02687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003395 294.0
BYD1_k127_7474735_24 PFAM EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006418 276.0
BYD1_k127_7474735_25 protein related to plant photosystem II stability assembly factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001169 264.0
BYD1_k127_7474735_26 pfam php K07053 - 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000505 237.0
BYD1_k127_7474735_27 hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000001193 229.0
BYD1_k127_7474735_28 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K00567,K01247 - 2.1.1.63,3.2.2.21 0.0000000000000000000000000000000000000000000000000000000000004071 234.0
BYD1_k127_7474735_29 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000005011 194.0
BYD1_k127_7474735_3 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 3.753e-229 719.0
BYD1_k127_7474735_30 - - - - 0.0000000000000000000000000000000000000000000000000002137 192.0
BYD1_k127_7474735_31 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000002392 171.0
BYD1_k127_7474735_32 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.000000000000000000000000000000000000000000003199 164.0
BYD1_k127_7474735_33 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000005407 166.0
BYD1_k127_7474735_34 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000002397 170.0
BYD1_k127_7474735_35 alpha beta - - - 0.0000000000000000000000000000000000000000046 173.0
BYD1_k127_7474735_36 chain release factor K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.00000000000000000000000000003742 127.0
BYD1_k127_7474735_37 Thioredoxin-like - - - 0.00000000000000000000000000008168 123.0
BYD1_k127_7474735_38 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000001457 102.0
BYD1_k127_7474735_39 Cysteine methyltransferase K07443 - - 0.00000000000000000000003607 111.0
BYD1_k127_7474735_4 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 2.73e-216 687.0
BYD1_k127_7474735_40 Mj0042 family finger-like - - - 0.000000000000000001249 99.0
BYD1_k127_7474735_41 small protein containing a coiled-coil domain - - - 0.0000000000000004465 81.0
BYD1_k127_7474735_42 polyhydroxyalkanoic acid - - - 0.00000000000003686 78.0
BYD1_k127_7474735_43 - - - - 0.00000000003503 70.0
BYD1_k127_7474735_44 Protein of unknown function (DUF3301) - - - 0.0000000002348 72.0
BYD1_k127_7474735_45 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00001786 56.0
BYD1_k127_7474735_5 Belongs to the GPAT DAPAT family K00631 GO:0003674,GO:0003824,GO:0004366,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006082,GO:0006629,GO:0006631,GO:0006644,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0019752,GO:0031224,GO:0031226,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0071704,GO:0071944,GO:0090407,GO:1901576 2.3.1.15 3.625e-212 685.0
BYD1_k127_7474735_6 Dehydrogenase - - - 4.436e-208 656.0
BYD1_k127_7474735_7 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 4.127e-196 626.0
BYD1_k127_7474735_8 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 562.0
BYD1_k127_7474735_9 Protein of unknown function (DUF1329) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 564.0
BYD1_k127_7498732_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 4.382e-199 652.0
BYD1_k127_7498732_1 NmrA-like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005627 491.0
BYD1_k127_7498732_10 Glycosyltransferase Family 4 - - - 0.000000000000000000000000000000000000000000000657 187.0
BYD1_k127_7498732_11 - - - - 0.000000000000000000000000000000000009159 147.0
BYD1_k127_7498732_12 Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000002604 135.0
BYD1_k127_7498732_13 Nodulation protein S (NodS) K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000001135 119.0
BYD1_k127_7498732_14 Polysaccharide deacetylase - - - 0.00000000000000000000000001172 121.0
BYD1_k127_7498732_15 COG2244 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.00000000000000000000006524 113.0
BYD1_k127_7498732_16 GlcNAc-PI de-N-acetylase - - - 0.0000000000000000000001971 108.0
BYD1_k127_7498732_17 Glycosyl transferase family group 2 - - - 0.0000000000000000621 93.0
BYD1_k127_7498732_2 PFAM asparagine synthase K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 475.0
BYD1_k127_7498732_3 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 318.0
BYD1_k127_7498732_4 Glycosyl transferase, family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001854 252.0
BYD1_k127_7498732_5 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002009 247.0
BYD1_k127_7498732_6 Hexapeptide repeat of succinyl-transferase - - - 0.0000000000000000000000000000000000000000000000000000000000004457 218.0
BYD1_k127_7498732_7 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000001471 220.0
BYD1_k127_7498732_8 Glycosyl transferase 4-like domain - - - 0.000000000000000000000000000000000000000000000000000000003605 214.0
BYD1_k127_7498732_9 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000005715 201.0
BYD1_k127_752415_0 Phosphomethylpyrimidine kinase K03272 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008713,GO:0008920,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016757,GO:0016772,GO:0019200,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046401,GO:0046835,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.1.167,2.7.7.70 0.0000000000000000000000000000000000000000000000000000543 194.0
BYD1_k127_752415_1 PFAM glycosyl transferase family 9 K02841 - - 0.0000000000000000000000000000000000000000000000002019 192.0
BYD1_k127_752415_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.000000000000000000000000000000000000000000000003623 178.0
BYD1_k127_7650101_0 TonB dependent receptor - - - 6.858e-271 859.0
BYD1_k127_7650101_1 multicopper - - - 1.057e-221 695.0
BYD1_k127_7650101_2 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 323.0
BYD1_k127_7650101_3 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000002153 219.0
BYD1_k127_7650101_4 Calcium/calmodulin dependent protein kinase II association domain - - - 0.00000000000000000000000000000000000000000000000001115 189.0
BYD1_k127_7650101_5 Oxidoreductase FAD-binding domain - - - 0.000000000000002905 77.0
BYD1_k127_7650101_6 Phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.000000000001358 70.0
BYD1_k127_7703854_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07715 GO:0000156,GO:0000160,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001130,GO:0001150,GO:0001151,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0035556,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 377.0
BYD1_k127_7703854_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 302.0
BYD1_k127_7703854_2 polysaccharide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000009977 222.0
BYD1_k127_7703854_3 - - - - 0.0000000000000000000000000000000000000000000000001531 192.0
BYD1_k127_7703854_4 - - - - 0.00000000000002286 83.0
BYD1_k127_7734941_0 Berberine and berberine like - - - 4.042e-280 863.0
BYD1_k127_7734941_1 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009018 575.0
BYD1_k127_7734941_10 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003793 266.0
BYD1_k127_7734941_11 Lysine exporter protein LysE YggA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001238 251.0
BYD1_k127_7734941_12 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001502 239.0
BYD1_k127_7734941_14 Penicillinase repressor - - - 0.000000000000000000000000000000000000001051 151.0
BYD1_k127_7734941_15 - K01286 - 3.4.16.4 0.00000000000000000000000000000000000008346 161.0
BYD1_k127_7734941_16 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000001399 143.0
BYD1_k127_7734941_17 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000004411 102.0
BYD1_k127_7734941_18 COG4319 Ketosteroid isomerase homolog - - - 0.0000002718 59.0
BYD1_k127_7734941_2 TIGRFAM 6-phosphogluconate dehydrogenase (decarboxylating) K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 484.0
BYD1_k127_7734941_3 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007385 445.0
BYD1_k127_7734941_4 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 449.0
BYD1_k127_7734941_5 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004094 407.0
BYD1_k127_7734941_6 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 407.0
BYD1_k127_7734941_7 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 391.0
BYD1_k127_7734941_8 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01431,K12251 - 3.5.1.53,3.5.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 369.0
BYD1_k127_7734941_9 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006109 276.0
BYD1_k127_7821720_0 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002816 509.0
BYD1_k127_7821720_1 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 425.0
BYD1_k127_7821720_10 -acetyltransferase K06975 - - 0.00000000000000000000000000001438 120.0
BYD1_k127_7821720_2 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001278 414.0
BYD1_k127_7821720_3 abc transporter atp-binding protein K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 347.0
BYD1_k127_7821720_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 328.0
BYD1_k127_7821720_5 domain, Protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 298.0
BYD1_k127_7821720_6 FtsX-like permease family K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000039 299.0
BYD1_k127_7821720_7 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000009711 238.0
BYD1_k127_7821720_8 COG1309 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000003704 176.0
BYD1_k127_7821720_9 Cytochrome c - - - 0.00000000000000000000000000000000000004611 158.0
BYD1_k127_7862299_0 PFAM ABC transporter K02471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 424.0
BYD1_k127_7862299_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 292.0
BYD1_k127_8081447_0 TonB dependent receptor K02014 - - 6.899e-296 934.0
BYD1_k127_8081447_1 small GTP-binding protein K02355 - - 1.302e-288 902.0
BYD1_k127_8081447_10 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 1.703e-206 671.0
BYD1_k127_8081447_100 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000001658 171.0
BYD1_k127_8081447_101 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000001798 175.0
BYD1_k127_8081447_102 - - - - 0.00000000000000000000000000000000000000000005881 166.0
BYD1_k127_8081447_103 Transcription elongation factor - - - 0.00000000000000000000000000000000000000004007 158.0
BYD1_k127_8081447_104 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000004905 159.0
BYD1_k127_8081447_105 Phenylacetate-CoA oxygenase K02610 - - 0.000000000000000000000000000000000000001487 149.0
BYD1_k127_8081447_106 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000004454 151.0
BYD1_k127_8081447_107 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000000000001047 143.0
BYD1_k127_8081447_108 protein conserved in bacteria - - - 0.0000000000000000000000000000000000002615 145.0
BYD1_k127_8081447_109 arsenate reductase K00537 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 1.20.4.1 0.00000000000000000000000000000000000383 144.0
BYD1_k127_8081447_11 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 1.359e-203 639.0
BYD1_k127_8081447_111 Protein of unknown function (DUF4242) - - - 0.0000000000000000000000000000009116 124.0
BYD1_k127_8081447_112 PFAM Activator of Hsp90 ATPase 1 family protein - - - 0.00000000000000000000000000001342 123.0
BYD1_k127_8081447_113 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000002815 120.0
BYD1_k127_8081447_114 Domain of unknown function (DUF4154) - - - 0.00000000000000000000000004825 115.0
BYD1_k127_8081447_115 Prokaryotic dksA/traR C4-type zinc finger - - - 0.0000000000000000000002072 101.0
BYD1_k127_8081447_116 Molybdopterin K03636 - - 0.0000000000000000000002716 100.0
BYD1_k127_8081447_117 transcriptional regulator - - - 0.00000000000000000000219 98.0
BYD1_k127_8081447_118 mandelate racemase muconate lactonizing K19802 GO:0003674,GO:0003824,GO:0016853,GO:0016854,GO:0016855 5.1.1.20 0.00000000000000003665 87.0
BYD1_k127_8081447_12 Bacterial protein of unknown function (DUF885) - - - 6.224e-201 642.0
BYD1_k127_8081447_120 - - - - 0.000000000002582 71.0
BYD1_k127_8081447_121 SnoaL-like domain - - - 0.000000000006848 71.0
BYD1_k127_8081447_122 NfeD-like C-terminal, partner-binding - - - 0.00000000001765 70.0
BYD1_k127_8081447_124 Tetratricopeptide repeat - - - 0.00002177 57.0
BYD1_k127_8081447_13 acyl-CoA dehydrogenase - - - 2.916e-199 637.0
BYD1_k127_8081447_14 PTS system, N-acetylglucosamine-specific K02803,K02804 - 2.7.1.193 1.484e-196 629.0
BYD1_k127_8081447_15 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 617.0
BYD1_k127_8081447_16 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 627.0
BYD1_k127_8081447_17 Belongs to the thiolase family K00626,K00632 - 2.3.1.16,2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001329 589.0
BYD1_k127_8081447_18 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000441 615.0
BYD1_k127_8081447_19 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 575.0
BYD1_k127_8081447_2 ABC-type multidrug transport system ATPase and permease K06147 - - 1.038e-283 882.0
BYD1_k127_8081447_20 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 540.0
BYD1_k127_8081447_21 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001316 542.0
BYD1_k127_8081447_22 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 532.0
BYD1_k127_8081447_23 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006127 548.0
BYD1_k127_8081447_24 Phenylacetate-CoA oxygenase K02609 - 1.14.13.149 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 517.0
BYD1_k127_8081447_25 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 527.0
BYD1_k127_8081447_26 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005981 515.0
BYD1_k127_8081447_27 carnitine dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 506.0
BYD1_k127_8081447_28 Cobalamin-independent synthase, Catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001147 507.0
BYD1_k127_8081447_29 E COG0620 Methionine synthase II (cobalamin-independent) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002751 507.0
BYD1_k127_8081447_3 Transketolase, pyrimidine binding domain - - - 3.19e-279 876.0
BYD1_k127_8081447_30 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003767 505.0
BYD1_k127_8081447_31 glycolate oxidase subunit GlcD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005412 482.0
BYD1_k127_8081447_32 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006434 480.0
BYD1_k127_8081447_33 ribosomal rna small subunit methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002445 482.0
BYD1_k127_8081447_34 Aminotransferase, class V - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001288 467.0
BYD1_k127_8081447_35 Sulfotransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 451.0
BYD1_k127_8081447_36 COG2133 Glucose sorbosone dehydrogenases K21430 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016901,GO:0019842,GO:0030288,GO:0030313,GO:0031406,GO:0031975,GO:0036094,GO:0042597,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0044464,GO:0046872,GO:0048037,GO:0048038,GO:0055114,GO:0070968,GO:0097159,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 445.0
BYD1_k127_8081447_37 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004486 433.0
BYD1_k127_8081447_38 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 461.0
BYD1_k127_8081447_39 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 440.0
BYD1_k127_8081447_4 TonB-dependent receptor - - - 9.757e-247 783.0
BYD1_k127_8081447_40 mannitol 2-dehydrogenase activity K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005625 434.0
BYD1_k127_8081447_41 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 420.0
BYD1_k127_8081447_42 Exodeoxyribonuclease III K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 420.0
BYD1_k127_8081447_43 Belongs to the peptidase M48B family K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002904 407.0
BYD1_k127_8081447_44 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 405.0
BYD1_k127_8081447_45 prohibitin homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004106 404.0
BYD1_k127_8081447_46 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 398.0
BYD1_k127_8081447_47 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008826 413.0
BYD1_k127_8081447_48 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 395.0
BYD1_k127_8081447_49 efflux protein, MATE family K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 402.0
BYD1_k127_8081447_5 X-Pro dipeptidyl-peptidase domain protein K06978 - - 1.681e-240 760.0
BYD1_k127_8081447_50 OST-HTH/LOTUS domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 383.0
BYD1_k127_8081447_51 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 375.0
BYD1_k127_8081447_52 Mo-co oxidoreductase dimerisation domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006491 371.0
BYD1_k127_8081447_53 FAD linked oxidase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 379.0
BYD1_k127_8081447_54 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 365.0
BYD1_k127_8081447_55 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003971 376.0
BYD1_k127_8081447_56 Sigma factor regulator FecR K00820 - 2.6.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 361.0
BYD1_k127_8081447_57 UTRA - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004798 341.0
BYD1_k127_8081447_58 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005379 351.0
BYD1_k127_8081447_59 Acyl-CoA thioesterase K10805 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002908 346.0
BYD1_k127_8081447_6 Glycosyl hydrolase family 20, catalytic domain K12373 - 3.2.1.52 1.324e-226 726.0
BYD1_k127_8081447_60 dipeptidase activity K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 337.0
BYD1_k127_8081447_61 Molybdenum cofactor synthesis domain protein K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 338.0
BYD1_k127_8081447_62 Membrane dipeptidase (Peptidase family M19) K01273 - 3.4.13.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 336.0
BYD1_k127_8081447_63 Belongs to the enoyl-CoA hydratase isomerase family K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 333.0
BYD1_k127_8081447_64 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004929 332.0
BYD1_k127_8081447_65 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 312.0
BYD1_k127_8081447_66 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006855 313.0
BYD1_k127_8081447_67 Phenylacetic acid catabolic protein K02611 - 1.14.13.149 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009951 293.0
BYD1_k127_8081447_68 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000012 295.0
BYD1_k127_8081447_69 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005697 286.0
BYD1_k127_8081447_7 Sodium:sulfate symporter transmembrane region - - - 3.254e-226 716.0
BYD1_k127_8081447_70 belongs to the nudix hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000009162 293.0
BYD1_k127_8081447_71 Oxidoreductase FAD-binding domain K02613 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000131 297.0
BYD1_k127_8081447_72 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001195 307.0
BYD1_k127_8081447_73 WYL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002912 303.0
BYD1_k127_8081447_74 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007859 269.0
BYD1_k127_8081447_75 Belongs to the NadC ModD family K00767,K03813 - 2.4.2.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000004135 274.0
BYD1_k127_8081447_76 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000004134 265.0
BYD1_k127_8081447_77 Belongs to the GST superfamily K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000006163 273.0
BYD1_k127_8081447_78 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007676 270.0
BYD1_k127_8081447_79 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002414 271.0
BYD1_k127_8081447_8 PTS system, glucose subfamily, IIA K11189 - - 9.291e-221 713.0
BYD1_k127_8081447_80 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005944 265.0
BYD1_k127_8081447_81 TRAP transporter T-component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009614 265.0
BYD1_k127_8081447_82 Belongs to the arginase family K01480 - 3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000403 271.0
BYD1_k127_8081447_83 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001078 247.0
BYD1_k127_8081447_84 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001934 256.0
BYD1_k127_8081447_85 peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002578 248.0
BYD1_k127_8081447_86 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000000000000000000000002026 216.0
BYD1_k127_8081447_87 XdhC and CoxI family - - - 0.00000000000000000000000000000000000000000000000000000001989 211.0
BYD1_k127_8081447_88 helix_turn_helix isocitrate lyase regulation K02624 - - 0.00000000000000000000000000000000000000000000000000000002356 218.0
BYD1_k127_8081447_89 SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000000000000005208 203.0
BYD1_k127_8081447_9 Peptidase family M49 - - - 1.181e-217 693.0
BYD1_k127_8081447_90 enoyl-CoA hydratase K07516 - 1.1.1.35 0.0000000000000000000000000000000000000000000000000000001055 217.0
BYD1_k127_8081447_91 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000001324 202.0
BYD1_k127_8081447_92 Sortilin, neurotensin receptor 3, - - - 0.000000000000000000000000000000000000000000000000001974 198.0
BYD1_k127_8081447_93 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000001675 188.0
BYD1_k127_8081447_94 Phenylacetate-CoA oxygenase K02612 GO:0006082,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016054,GO:0019439,GO:0019748,GO:0019752,GO:0032787,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 - 0.000000000000000000000000000000000000000000000001567 179.0
BYD1_k127_8081447_95 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000004198 191.0
BYD1_k127_8081447_96 PRC-barrel domain - - - 0.00000000000000000000000000000000000000000000004923 171.0
BYD1_k127_8081447_97 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000006629 188.0
BYD1_k127_8081447_98 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000002396 187.0
BYD1_k127_8081447_99 phenylacetic acid degradation protein K02614 GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 - 0.000000000000000000000000000000000000000000001391 169.0
BYD1_k127_8099063_0 helix_turn_helix, Lux Regulon K03556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 557.0
BYD1_k127_8099063_1 Pyridoxal-dependent decarboxylase conserved domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 528.0
BYD1_k127_8099063_10 Type III secretion system lipoprotein chaperone (YscW) K09914 - - 0.000000001674 71.0
BYD1_k127_8099063_2 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000498 385.0
BYD1_k127_8099063_3 pyrroloquinoline quinone binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005873 300.0
BYD1_k127_8099063_4 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002157 256.0
BYD1_k127_8099063_5 Cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000004616 230.0
BYD1_k127_8099063_6 Low affinity iron permease - - - 0.000000000000000000000000000000000000000000000000001475 185.0
BYD1_k127_8099063_7 Glutathione-dependent formaldehyde-activating enzyme family protein 4 - - - 0.00000000000000000000000000000000001041 145.0
BYD1_k127_8099063_9 Acetyltransferase (GNAT) domain - - - 0.000000000000004737 76.0
BYD1_k127_8156589_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 520.0
BYD1_k127_8156589_1 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007977 434.0
BYD1_k127_8156589_10 Belongs to the HpcH HpaI aldolase family - - - 0.000000000000000000000000000000000001723 149.0
BYD1_k127_8156589_11 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000008903 127.0
BYD1_k127_8156589_12 exo-alpha-(2->6)-sialidase activity - - - 0.000000000004879 79.0
BYD1_k127_8156589_13 exo-alpha-(2->6)-sialidase activity - - - 0.000000001462 73.0
BYD1_k127_8156589_2 Aldo/keto reductase family K00064 - 1.1.1.122 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 362.0
BYD1_k127_8156589_3 Bacterial extracellular solute-binding protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004058 294.0
BYD1_k127_8156589_4 H( )-stimulated, divalent metal cation uptake system - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006463 278.0
BYD1_k127_8156589_5 MaoC like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004073 253.0
BYD1_k127_8156589_6 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005257 245.0
BYD1_k127_8156589_7 hydratase K01617,K02554 - 4.1.1.77,4.2.1.80 0.00000000000000000000000000000000000000000000000000000000000000003242 244.0
BYD1_k127_8156589_8 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000005613 178.0
BYD1_k127_8156589_9 SnoaL-like domain - - - 0.000000000000000000000000000000000000000000001134 182.0
BYD1_k127_8346140_0 OmpA family - - - 0.0 2078.0
BYD1_k127_8346140_1 Domain of unknown function DUF11 - - - 0.0 1414.0
BYD1_k127_8346140_10 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 - 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008376 457.0
BYD1_k127_8346140_11 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 440.0
BYD1_k127_8346140_12 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 419.0
BYD1_k127_8346140_13 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 413.0
BYD1_k127_8346140_14 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009782 391.0
BYD1_k127_8346140_15 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 383.0
BYD1_k127_8346140_16 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 391.0
BYD1_k127_8346140_17 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009845 358.0
BYD1_k127_8346140_18 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016043,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0022607,GO:0030288,GO:0030313,GO:0031647,GO:0031975,GO:0033218,GO:0036211,GO:0042277,GO:0042597,GO:0043163,GO:0043165,GO:0043170,GO:0043412,GO:0044085,GO:0044091,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0044764,GO:0045229,GO:0050821,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0060274,GO:0061024,GO:0061077,GO:0065007,GO:0065008,GO:0071704,GO:0071709,GO:0071840,GO:0140096,GO:1901564 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008495 361.0
BYD1_k127_8346140_19 PFAM Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 334.0
BYD1_k127_8346140_2 Tetratricopeptide repeat - - - 0.0 1040.0
BYD1_k127_8346140_20 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002194 311.0
BYD1_k127_8346140_21 MotA/TolQ/ExbB proton channel family K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 288.0
BYD1_k127_8346140_22 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 299.0
BYD1_k127_8346140_23 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000659 286.0
BYD1_k127_8346140_24 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000002533 276.0
BYD1_k127_8346140_25 COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) K00966,K00992 GO:0000166,GO:0000270,GO:0000287,GO:0001882,GO:0001884,GO:0002134,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006040,GO:0006082,GO:0006807,GO:0008150,GO:0008152,GO:0009254,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0019103,GO:0019752,GO:0030203,GO:0032549,GO:0032551,GO:0032553,GO:0032557,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044281,GO:0046872,GO:0070569,GO:0071704,GO:0097159,GO:0097172,GO:0097367,GO:1901135,GO:1901265,GO:1901363,GO:1901564 2.7.7.13,2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000001792 262.0
BYD1_k127_8346140_26 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.0000000000000000000000000000000000000000000000000000000000000000000000142 258.0
BYD1_k127_8346140_27 Metal dependent phosphohydrolases with conserved 'HD' motif. K06950 - - 0.00000000000000000000000000000000000000000000000000000000000000000005464 241.0
BYD1_k127_8346140_28 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.00000000000000000000000000000000000000000000000000000007731 203.0
BYD1_k127_8346140_29 arylformamidase activity - - - 0.000000000000000000000000000000000000000000000000000001594 204.0
BYD1_k127_8346140_3 Protein of unknown function, DUF255 K06888 - - 5.356e-257 811.0
BYD1_k127_8346140_30 PFAM ApaG domain protein K06195 - - 0.000000000000000000000000000000000000000000000000000004514 192.0
BYD1_k127_8346140_31 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000000000000000000000000000000002967 197.0
BYD1_k127_8346140_32 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000803 168.0
BYD1_k127_8346140_33 Biopolymer transport protein ExbD/TolR - - - 0.00000000000000000000000000000000000000000001272 175.0
BYD1_k127_8346140_34 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000001704 163.0
BYD1_k127_8346140_35 redox protein regulator of disulfide bond formation - - - 0.000000000000000000000000000000000000000001315 160.0
BYD1_k127_8346140_36 bis(5'-adenosyl)-triphosphatase activity - - - 0.000000000000000000000000000000000000000001652 160.0
BYD1_k127_8346140_37 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000007986 159.0
BYD1_k127_8346140_38 MAPEG family - - - 0.00000000000000000000000000003452 129.0
BYD1_k127_8346140_39 PFAM TfoX domain protein K07343 - - 0.0000000000000000000000000006715 117.0
BYD1_k127_8346140_4 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 4.227e-254 814.0
BYD1_k127_8346140_40 protein conserved in bacteria - - - 0.0000000000000000000001784 102.0
BYD1_k127_8346140_41 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K06149 - - 0.0000000000000000000002096 106.0
BYD1_k127_8346140_42 Belongs to the UPF0250 family K09158 - - 0.0000000000000000003664 89.0
BYD1_k127_8346140_5 cytochrome c peroxidase K00428 - 1.11.1.5 6.851e-232 724.0
BYD1_k127_8346140_6 Tetratricopeptide repeat - - - 6.399e-201 639.0
BYD1_k127_8346140_7 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008017 513.0
BYD1_k127_8346140_8 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 464.0
BYD1_k127_8346140_9 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 444.0
BYD1_k127_8426727_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1137.0
BYD1_k127_8426727_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 2.002e-308 968.0
BYD1_k127_8426727_10 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003253 270.0
BYD1_k127_8426727_11 Aerobic-type carbon monoxide dehydrogenase small subunit CoxS K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000001204 227.0
BYD1_k127_8426727_12 - - - - 0.000000000000000000000000000000000000000000000000000000006157 202.0
BYD1_k127_8426727_13 transcriptional regulator K05800 - - 0.00000000000000000000000000000000000000000000000001129 184.0
BYD1_k127_8426727_14 arylsulfatase activity - - - 0.00000000000000000000000000000000000000000000001135 191.0
BYD1_k127_8426727_15 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000006783 176.0
BYD1_k127_8426727_16 gag-polyprotein putative aspartyl protease - - - 0.000000000000000000000000000000000000000009812 165.0
BYD1_k127_8426727_17 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000005794 165.0
BYD1_k127_8426727_18 Regulatory protein, FmdB family - - - 0.000000000000000000000000239 115.0
BYD1_k127_8426727_19 Modulates RecA activity K03565 - - 0.000000000000000000000001344 111.0
BYD1_k127_8426727_2 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 5.59e-295 912.0
BYD1_k127_8426727_20 CAAX protease self-immunity - - - 0.000000000000000000000001812 115.0
BYD1_k127_8426727_21 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.00000000000000000000003473 100.0
BYD1_k127_8426727_22 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000003771 108.0
BYD1_k127_8426727_23 - - - - 0.00000000000000033 82.0
BYD1_k127_8426727_24 Integrase core domain - - - 0.000000000000005759 76.0
BYD1_k127_8426727_25 helix_turn_helix ASNC type - - - 0.000000000000007401 79.0
BYD1_k127_8426727_26 Helix-turn-helix domain - - - 0.000002971 55.0
BYD1_k127_8426727_27 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.000008409 48.0
BYD1_k127_8426727_3 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 2.086e-294 928.0
BYD1_k127_8426727_4 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 1.521e-257 806.0
BYD1_k127_8426727_5 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 582.0
BYD1_k127_8426727_6 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000575 537.0
BYD1_k127_8426727_7 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 457.0
BYD1_k127_8426727_8 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002952 294.0
BYD1_k127_8426727_9 DDE domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002995 268.0
BYD1_k127_8571975_0 Heavy metal translocating P-type atpase K17686 - 3.6.3.54 0.0 1055.0
BYD1_k127_8571975_1 Putative glucoamylase - - - 2.516e-250 780.0
BYD1_k127_8571975_10 TAP-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007127 376.0
BYD1_k127_8571975_11 N-formylglutamate amidohydrolase K01458,K01479 - 3.5.1.68,3.5.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 362.0
BYD1_k127_8571975_12 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001174 363.0
BYD1_k127_8571975_13 Methyl-transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 364.0
BYD1_k127_8571975_14 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001905 350.0
BYD1_k127_8571975_15 abc transporter atp-binding protein K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 331.0
BYD1_k127_8571975_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 317.0
BYD1_k127_8571975_17 ABC transporter K09697 - 3.6.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002419 324.0
BYD1_k127_8571975_18 ATPases associated with a variety of cellular activities K05847 GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0015695,GO:0015696,GO:0015697,GO:0015838,GO:0031460,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0072337 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 297.0
BYD1_k127_8571975_19 PFAM O-methyltransferase family 3 K00588 - 2.1.1.104 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 293.0
BYD1_k127_8571975_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 1.877e-249 781.0
BYD1_k127_8571975_20 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001309 296.0
BYD1_k127_8571975_21 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006849 273.0
BYD1_k127_8571975_22 glutathione s-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000001535 277.0
BYD1_k127_8571975_23 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000006611 233.0
BYD1_k127_8571975_24 Sodium ABC transporter permease K09696 - - 0.0000000000000000000000000000000000000000000000000000000000008518 229.0
BYD1_k127_8571975_25 Sigma-70 region 2 - - - 0.0000000000000000000000000000006908 128.0
BYD1_k127_8571975_28 SnoaL-like domain - - - 0.00000000000188 75.0
BYD1_k127_8571975_29 Outer membrane protein beta-barrel domain - - - 0.000002393 58.0
BYD1_k127_8571975_3 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 2.855e-235 732.0
BYD1_k127_8571975_4 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 595.0
BYD1_k127_8571975_5 Substrate binding domain of ABC-type glycine betaine transport system K05845,K05846 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 542.0
BYD1_k127_8571975_6 Amidohydrolase family K05603 - 3.5.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004298 522.0
BYD1_k127_8571975_7 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004289 495.0
BYD1_k127_8571975_8 NADPH-dependent FMN reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002065 449.0
BYD1_k127_8571975_9 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007158 462.0
BYD1_k127_8641900_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1274.0
BYD1_k127_8641900_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1225.0
BYD1_k127_8641900_10 TonB-dependent receptor plug - - - 4.004e-210 678.0
BYD1_k127_8641900_11 Beta-eliminating lyase K01667 - 4.1.99.1 4.961e-208 654.0
BYD1_k127_8641900_12 serine threonine protein kinase K12132 - 2.7.11.1 6.209e-208 679.0
BYD1_k127_8641900_13 Diguanylate cyclase - - - 1.187e-206 673.0
BYD1_k127_8641900_14 POT family K03305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004973 603.0
BYD1_k127_8641900_15 Domain of unknown function (DUF1611_N) Rossmann-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 533.0
BYD1_k127_8641900_16 PFAM Type II secretion system protein E - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 497.0
BYD1_k127_8641900_17 COG5598 Trimethylamine corrinoid methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007823 478.0
BYD1_k127_8641900_18 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007964 473.0
BYD1_k127_8641900_19 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 464.0
BYD1_k127_8641900_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 9.173e-275 859.0
BYD1_k127_8641900_20 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 454.0
BYD1_k127_8641900_21 geranylgeranyl reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 452.0
BYD1_k127_8641900_22 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003559 447.0
BYD1_k127_8641900_23 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001512 428.0
BYD1_k127_8641900_24 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 439.0
BYD1_k127_8641900_25 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001674 445.0
BYD1_k127_8641900_26 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00627 - 2.3.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007746 438.0
BYD1_k127_8641900_27 protein conserved in bacteria K09930 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009991 385.0
BYD1_k127_8641900_28 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009315 376.0
BYD1_k127_8641900_29 Cupin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007422 362.0
BYD1_k127_8641900_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 8.487e-250 788.0
BYD1_k127_8641900_30 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis K01494 - 3.5.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009392 344.0
BYD1_k127_8641900_31 Belongs to the mandelate racemase muconate lactonizing enzyme family K19802 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016854,GO:0034641,GO:0043167,GO:0043169,GO:0043603,GO:0044237,GO:0046872,GO:0071704,GO:1901564 5.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 352.0
BYD1_k127_8641900_32 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 314.0
BYD1_k127_8641900_33 taurine catabolism dioxygenase K00471 - 1.14.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 317.0
BYD1_k127_8641900_34 3-phytase K01083 - 3.1.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 325.0
BYD1_k127_8641900_35 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001904 297.0
BYD1_k127_8641900_36 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000123 298.0
BYD1_k127_8641900_37 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:1901360 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003712 276.0
BYD1_k127_8641900_38 Phosphohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002762 275.0
BYD1_k127_8641900_39 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001969 263.0
BYD1_k127_8641900_4 MatE - - - 1.081e-246 767.0
BYD1_k127_8641900_40 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006452 273.0
BYD1_k127_8641900_41 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.000000000000000000000000000000000000000000000000000000000000000000005333 241.0
BYD1_k127_8641900_42 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000004014 237.0
BYD1_k127_8641900_43 Phage SPO1 DNA polymerase-related protein K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000002145 245.0
BYD1_k127_8641900_44 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000003862 229.0
BYD1_k127_8641900_45 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000003066 246.0
BYD1_k127_8641900_46 Putative DNA-binding domain K09929 - - 0.0000000000000000000000000000000000000000000000000000000000002395 225.0
BYD1_k127_8641900_47 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000234 220.0
BYD1_k127_8641900_48 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000003265 210.0
BYD1_k127_8641900_49 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 GO:0003674,GO:0003824,GO:0004644,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0033554,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051716 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000586 212.0
BYD1_k127_8641900_5 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 3.655e-239 752.0
BYD1_k127_8641900_50 Belongs to the MtfA family K09933 - - 0.000000000000000000000000000000000000000000000000000000000442 211.0
BYD1_k127_8641900_51 Psort location CytoplasmicMembrane, score 9.46 K15977 - - 0.0000000000000000000000000000000000000000000000000000000004922 209.0
BYD1_k127_8641900_52 Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000000001461 170.0
BYD1_k127_8641900_53 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.0000000000000000000000000000000000000000009854 158.0
BYD1_k127_8641900_54 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000003775 167.0
BYD1_k127_8641900_55 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.0000000000000000000000000000000000000002457 154.0
BYD1_k127_8641900_56 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.0000000000000000000000000000000000001081 155.0
BYD1_k127_8641900_57 belongs to the Fur family K09826 - - 0.0000000000000000000000000000000000008977 143.0
BYD1_k127_8641900_58 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.000000000000000000000000000000002413 143.0
BYD1_k127_8641900_59 protein conserved in bacteria K09938 - - 0.000000000000000000000000001846 130.0
BYD1_k127_8641900_6 Beta-lactamase - - - 2.888e-238 754.0
BYD1_k127_8641900_60 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0006950,GO:0008150,GO:0009266,GO:0009408,GO:0009628,GO:0016787,GO:0016817,GO:0016818,GO:0050896 3.6.1.7 0.0000000000000000001926 96.0
BYD1_k127_8641900_61 Protein of unknown function (DUF3108) - - - 0.0000000000000000004047 100.0
BYD1_k127_8641900_62 Transposase - - - 0.000000000000000002567 87.0
BYD1_k127_8641900_63 Protein of unknown function (DUF1289) K06938 - - 0.00000000005293 64.0
BYD1_k127_8641900_64 Type II transport protein GspH K08084 - - 0.000000009342 63.0
BYD1_k127_8641900_65 Cytochrome c K12263 - - 0.00000007933 60.0
BYD1_k127_8641900_66 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000004251 61.0
BYD1_k127_8641900_68 Type IV Pilus-assembly protein W K02672 - - 0.000003938 59.0
BYD1_k127_8641900_69 helix_turn_helix, arabinose operon control protein - - - 0.0001362 54.0
BYD1_k127_8641900_7 PFAM Beta-lactamase - - - 9.196e-222 698.0
BYD1_k127_8641900_8 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 8.031e-221 695.0
BYD1_k127_8641900_9 PFAM biotin lipoyl attachment domain-containing protein K00382 - 1.8.1.4 2.465e-213 699.0
BYD1_k127_8829787_0 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 9.252e-225 713.0
BYD1_k127_8829787_1 RESPONSE REGULATOR receiver - - - 6.381e-205 644.0
BYD1_k127_8829787_10 NnrU protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000006136 246.0
BYD1_k127_8829787_11 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001232 241.0
BYD1_k127_8829787_12 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000000000000000000000000000000006548 203.0
BYD1_k127_8829787_13 PQQ-like domain - - - 0.0000000000000000000000000000000000000000000000005539 175.0
BYD1_k127_8829787_14 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000007986 162.0
BYD1_k127_8829787_16 response to hydrogen peroxide - - - 0.0000000000000001664 87.0
BYD1_k127_8829787_18 Integrase core domain - - - 0.000000000000001237 77.0
BYD1_k127_8829787_2 Pfam Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 579.0
BYD1_k127_8829787_3 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 539.0
BYD1_k127_8829787_4 Alpha/beta hydrolase family K01259 - 3.4.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002294 484.0
BYD1_k127_8829787_5 Pyridoxal-phosphate dependent enzyme K01738 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0048037,GO:0050662,GO:0070279,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 449.0
BYD1_k127_8829787_6 Bacterial protein of unknown function (DUF899) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005717 443.0
BYD1_k127_8829787_7 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004902 437.0
BYD1_k127_8829787_8 C-terminal domain of 1-Cys peroxiredoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 384.0
BYD1_k127_8829787_9 PFAM Alcohol dehydrogenase, zinc-binding K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001437 296.0
BYD1_k127_898382_0 Response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 505.0
BYD1_k127_898382_1 MacB-like periplasmic core domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 441.0
BYD1_k127_898382_2 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007678 362.0
BYD1_k127_898382_3 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 339.0
BYD1_k127_898382_4 HlyD family secretion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006872 281.0
BYD1_k127_898382_5 Chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000977 210.0
BYD1_k127_9160913_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 2.706e-217 700.0
BYD1_k127_9160913_1 2-methylcitrate dehydratase K01720 - 4.2.1.79 6.931e-212 669.0
BYD1_k127_9160913_10 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 342.0
BYD1_k127_9160913_11 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000299 336.0
BYD1_k127_9160913_12 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 310.0
BYD1_k127_9160913_13 PFAM Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001035 268.0
BYD1_k127_9160913_14 PFAM Aminotransferase, class IV K02619 - 4.1.3.38 0.0000000000000000000000000000000000000000000000000000000000000006558 229.0
BYD1_k127_9160913_15 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000679 198.0
BYD1_k127_9160913_16 General Secretion Pathway protein K02456 - - 0.0000000000000000000000000000000000000000000000000001365 189.0
BYD1_k127_9160913_17 Pilus assembly protein PilZ K02676 - - 0.0000000000000000000000000000000000000000000000002678 181.0
BYD1_k127_9160913_18 Type II secretion system (T2SS), protein K K02460 - - 0.0000000000000000000000000000000000000000000000004188 195.0
BYD1_k127_9160913_19 DNA polymerase III, delta' K02341 - 2.7.7.7 0.000000000000000000000000000000000000000000000001013 187.0
BYD1_k127_9160913_2 3-hydroxyacyl-coa dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 9.536e-211 675.0
BYD1_k127_9160913_20 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0050896,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000000001694 128.0
BYD1_k127_9160913_21 Type II secretion system (T2SS), protein J - - - 0.0000000000000000000000000000003024 130.0
BYD1_k127_9160913_22 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.000000000000000000000000008163 124.0
BYD1_k127_9160913_23 general secretion pathway protein H K02457 - - 0.0000000000000000000001404 104.0
BYD1_k127_9160913_24 general secretion pathway protein K02458 - - 0.00000000000000000008105 95.0
BYD1_k127_9160913_25 Type II secretion system (T2SS), protein N - - - 0.00000000000001873 82.0
BYD1_k127_9160913_26 MTH538 TIR-like domain (DUF1863) - - - 0.0000000000003 78.0
BYD1_k127_9160913_27 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000004607 72.0
BYD1_k127_9160913_28 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000001365 59.0
BYD1_k127_9160913_3 Citrate synthase, C-terminal domain K01659 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006113,GO:0006629,GO:0006631,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016740,GO:0016746,GO:0016829,GO:0016830,GO:0016833,GO:0016999,GO:0017144,GO:0019541,GO:0019679,GO:0019752,GO:0032787,GO:0036440,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0046459,GO:0046912,GO:0050440,GO:0055114,GO:0071704 2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000834 595.0
BYD1_k127_9160913_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005419 555.0
BYD1_k127_9160913_5 component I K01657 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 436.0
BYD1_k127_9160913_6 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 400.0
BYD1_k127_9160913_7 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001909 382.0
BYD1_k127_9160913_8 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 346.0
BYD1_k127_9160913_9 Fumarylacetoacetate (FAA) hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004899 342.0
BYD1_k127_9196692_0 Neisseria PilC beta-propeller domain K02674 - - 0.0 1104.0
BYD1_k127_9196692_1 Nitrite reductase K15864 - 1.7.2.1,1.7.99.1 1.695e-316 983.0
BYD1_k127_9196692_10 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003533 533.0
BYD1_k127_9196692_11 Involved in arsenical resistance. Thought to form the channel of an arsenite pump - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 500.0
BYD1_k127_9196692_12 Homospermidine synthase K00808 - 2.5.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 497.0
BYD1_k127_9196692_13 TonB-dependent heme hemoglobin receptor K16087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 458.0
BYD1_k127_9196692_14 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 423.0
BYD1_k127_9196692_15 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 396.0
BYD1_k127_9196692_16 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586,K12526 - 2.7.2.4,4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 397.0
BYD1_k127_9196692_17 Ring hydroxylating alpha subunit (catalytic domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 357.0
BYD1_k127_9196692_18 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 356.0
BYD1_k127_9196692_19 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 322.0
BYD1_k127_9196692_2 Major Facilitator Superfamily - - - 4.49e-244 764.0
BYD1_k127_9196692_20 methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000165 277.0
BYD1_k127_9196692_21 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007959 286.0
BYD1_k127_9196692_22 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001614 284.0
BYD1_k127_9196692_23 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000001262 244.0
BYD1_k127_9196692_24 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000002639 236.0
BYD1_k127_9196692_25 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000006323 236.0
BYD1_k127_9196692_26 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000008484 222.0
BYD1_k127_9196692_27 Cysteine-rich secretory protein family - - - 0.00000000000000000000000000000000000000000000000000000000000001412 225.0
BYD1_k127_9196692_28 Belongs to the ompA family - - - 0.00000000000000000000000000000000000000000000000000000000812 208.0
BYD1_k127_9196692_29 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000009086 203.0
BYD1_k127_9196692_3 peptidase S9 - - - 6.898e-229 737.0
BYD1_k127_9196692_30 type IV pilus modification protein PilV K02671 - - 0.0000000000000000000000000000000000000000000000000000002447 207.0
BYD1_k127_9196692_31 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000007242 201.0
BYD1_k127_9196692_32 nitrogen fixation sensor protein fixL K14986 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000002297 201.0
BYD1_k127_9196692_33 Las17-binding protein actin regulator - - - 0.00000000000000000000000000000000000000000001136 174.0
BYD1_k127_9196692_34 Type II transport protein GspH K08084 - - 0.0000000000000000000000000000000000000000009578 162.0
BYD1_k127_9196692_35 - - - - 0.00000000000000000000000000000000000000001326 158.0
BYD1_k127_9196692_36 Domain of unknown function (DUF4399) - - - 0.00000000000000000000000000000000000000001738 163.0
BYD1_k127_9196692_37 PAP2 superfamily - - - 0.0000000000000000000000000000000000357 145.0
BYD1_k127_9196692_38 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000001635 134.0
BYD1_k127_9196692_39 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.000000000000000000000000000000001709 133.0
BYD1_k127_9196692_4 Amidohydrolase family K06015 - 3.5.1.81 7.12e-229 722.0
BYD1_k127_9196692_40 DNA-templated transcription, initiation K03088,K03091 - - 0.00000000000000000000000000000007662 132.0
BYD1_k127_9196692_41 Pilus assembly protein PilX - - - 0.000000000000000000000000000001172 136.0
BYD1_k127_9196692_42 COG0589 Universal stress protein UspA and related nucleotide-binding proteins K14055 - - 0.00000000000000000000000000005145 129.0
BYD1_k127_9196692_43 - - - - 0.00000000000000000000000000005965 120.0
BYD1_k127_9196692_44 methyltransferase activity - - - 0.0000000000000000000000001642 123.0
BYD1_k127_9196692_45 Protein required for attachment to host cells - - - 0.000000000000000008516 89.0
BYD1_k127_9196692_47 Cupin 2, conserved barrel domain protein - - - 0.000000002971 68.0
BYD1_k127_9196692_48 Domain of unknown function (DUF4398) - - - 0.00000565 54.0
BYD1_k127_9196692_5 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 2.212e-228 739.0
BYD1_k127_9196692_6 Flavin containing amine oxidoreductase - - - 2.114e-216 685.0
BYD1_k127_9196692_7 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 585.0
BYD1_k127_9196692_8 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily K01002 - 2.7.8.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002717 582.0
BYD1_k127_9196692_9 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain K06978 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 550.0
BYD1_k127_9263755_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 627.0
BYD1_k127_9263755_1 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure - - - 0.00000000000000000000000004553 114.0
BYD1_k127_9263755_2 cheY-homologous receiver domain - - - 0.00000000000000000000000007797 108.0
BYD1_k127_9263755_3 Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth - - - 0.000000000000000000002885 100.0
BYD1_k127_9367252_0 GTP-binding protein TypA K06207 - - 4.458e-272 848.0
BYD1_k127_9367252_1 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008744 606.0
BYD1_k127_9367252_2 Male sterility protein K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 454.0
BYD1_k127_9367252_3 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004188 366.0
BYD1_k127_9367252_4 Histidine kinase K07711 GO:0000155,GO:0000160,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564 2.7.13.3 0.0000000000000000005468 95.0
BYD1_k127_9543785_0 N-6 DNA Methylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002537 312.0
BYD1_k127_9543785_1 helicase activity - - - 0.000000000000000000000000000000000000000000000000000000007933 225.0
BYD1_k127_9545982_0 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 6.704e-239 757.0
BYD1_k127_9545982_1 Asparagine synthase - - - 5.955e-211 683.0
BYD1_k127_9545982_10 Phosphoglucose isomerase K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008325 497.0
BYD1_k127_9545982_11 COG3980 Spore coat polysaccharide biosynthesis protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 479.0
BYD1_k127_9545982_12 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003087 401.0
BYD1_k127_9545982_13 Lysin motif K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008691 391.0
BYD1_k127_9545982_14 Capsule assembly protein Wzi - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 381.0
BYD1_k127_9545982_15 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 351.0
BYD1_k127_9545982_16 NeuB family K01654 - 2.5.1.56 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 354.0
BYD1_k127_9545982_17 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006502 332.0
BYD1_k127_9545982_18 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000222 323.0
BYD1_k127_9545982_19 Acylneuraminate cytidylyltransferase K00983 - 2.7.7.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 298.0
BYD1_k127_9545982_2 Polysaccharide biosynthesis/export protein - - - 4.263e-208 681.0
BYD1_k127_9545982_20 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001228 278.0
BYD1_k127_9545982_21 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007351 274.0
BYD1_k127_9545982_22 Glycosyl transferase 4-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001625 271.0
BYD1_k127_9545982_23 protein methyltransferase activity K00568,K02687 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000001815 270.0
BYD1_k127_9545982_24 PFAM sugar transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002987 264.0
BYD1_k127_9545982_25 peptidylprolyl isomerase K03770 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000005811 275.0
BYD1_k127_9545982_26 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000007407 265.0
BYD1_k127_9545982_27 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007915 254.0
BYD1_k127_9545982_28 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000007856 236.0
BYD1_k127_9545982_29 Bacterial transferase hexapeptide (six repeats) - - - 0.000000000000000000000000000000000000000000000000000000000006626 215.0
BYD1_k127_9545982_3 (ABC) transporter K06147,K06148 GO:0003674,GO:0003824,GO:0005215,GO:0005319,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0008643,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0010876,GO:0015221,GO:0015399,GO:0015405,GO:0015437,GO:0015772,GO:0015920,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0022804,GO:0022857,GO:0022884,GO:0033036,GO:0034040,GO:0034645,GO:0036211,GO:0042623,GO:0042626,GO:0043170,GO:0043412,GO:0043413,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0051179,GO:0051234,GO:0055085,GO:0070085,GO:0071702,GO:0071704,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 - 4.823e-203 665.0
BYD1_k127_9545982_30 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000002987 215.0
BYD1_k127_9545982_31 lipopolysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000127 182.0
BYD1_k127_9545982_32 methyltransferase K03183,K15256 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000004303 184.0
BYD1_k127_9545982_33 Bacterial transferase hexapeptide (six repeats) K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000007362 176.0
BYD1_k127_9545982_34 3-demethylubiquinone-9 3-O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000004372 171.0
BYD1_k127_9545982_35 PFAM methyltransferase - - - 0.00000000000000000000000000000000000000007171 161.0
BYD1_k127_9545982_36 Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components K05785 - - 0.0000000000000000000000000000000000008248 145.0
BYD1_k127_9545982_37 Winged helix-turn-helix DNA-binding - - - 0.00000000000000000000000000000000003086 137.0
BYD1_k127_9545982_38 Glutathione synthase Ribosomal protein S6 modification enzyme (Glutaminyl transferase) K01955,K05844,K14940 - 6.3.2.32,6.3.5.5 0.0000000000000000000000000000008847 134.0
BYD1_k127_9545982_39 Glycosyltransferase, group 1 family protein - - - 0.0000000000000000000000265 116.0
BYD1_k127_9545982_4 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 590.0
BYD1_k127_9545982_40 Polysaccharide biosynthesis protein - - - 0.0000000000000000007444 93.0
BYD1_k127_9545982_41 lipid-A-disaccharide synthase activity K00748 - 2.4.1.182 0.00000000000000347 91.0
BYD1_k127_9545982_42 - - - - 0.0000000000002344 70.0
BYD1_k127_9545982_43 hydrolase (HAD superfamily) K07025 - - 0.000001576 59.0
BYD1_k127_9545982_5 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03314 GO:0003674,GO:0005215,GO:0005451,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006873,GO:0006885,GO:0008150,GO:0008324,GO:0009987,GO:0010035,GO:0010038,GO:0010226,GO:0015075,GO:0015077,GO:0015078,GO:0015081,GO:0015291,GO:0015297,GO:0015298,GO:0015299,GO:0015318,GO:0015385,GO:0015491,GO:0015672,GO:0016020,GO:0019725,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0034220,GO:0035725,GO:0042221,GO:0042592,GO:0044464,GO:0045851,GO:0046873,GO:0048878,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099516,GO:1902600 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 578.0
BYD1_k127_9545982_6 NAD(P)H-binding K15894,K17716 - 4.2.1.115,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 541.0
BYD1_k127_9545982_7 Belongs to the DegT DnrJ EryC1 family K13010 - 2.6.1.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004831 551.0
BYD1_k127_9545982_8 3-beta hydroxysteroid dehydrogenase/isomerase family K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 515.0
BYD1_k127_9545982_9 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002534 499.0
BYD1_k127_9634654_0 Patatin-like phospholipase K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 511.0
BYD1_k127_9634654_1 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000009182 228.0
BYD1_k127_9634654_2 serine threonine protein kinase - - - 0.00000000000000000231 85.0
BYD1_k127_9634654_3 - - - - 0.00004705 51.0
BYD1_k127_9780444_0 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000003425 253.0
BYD1_k127_9780444_1 ABC transporter K09812 - - 0.000000000000000000000000000000000000000000000000000000001801 209.0
BYD1_k127_9780444_2 SurA N-terminal domain K03771 - 5.2.1.8 0.00000002771 59.0
BYD1_k127_985885_0 Glycosyl hydrolases family 15 - - - 4.849e-251 788.0
BYD1_k127_985885_1 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 537.0
BYD1_k127_985885_2 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 458.0
BYD1_k127_985885_3 Peptidase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006805 447.0
BYD1_k127_985885_4 Belongs to the bacterial glucokinase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001748 253.0
BYD1_k127_985885_5 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000005871 106.0
BYD1_k127_985885_6 LysR substrate binding domain K03566 - - 0.00000000000000000000005694 104.0
BYD1_k127_9867226_0 Peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 451.0
BYD1_k127_9867226_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002618 280.0
BYD1_k127_9867226_2 Chromosomal replication initiator, DnaA K07491 - - 0.00000000000000000000000000000000000000005486 156.0
BYD1_k127_9867226_3 Glycosyl transferase, family 2 - - - 0.0001944 45.0