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Overview

ID MAG00049
Name BYD1_bin.7
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Desulfobacterota_I
Class Desulfovibrionia
Order Desulfovibrionales
Family
Genus
Species
Assembly information
Completeness (%) 82.72
Contamination (%) 0.4
GC content (%) 55.0
N50 (bp) 9,715
Genome size (bp) 3,181,447

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes2757

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_1000231_0 hydro-lyase, Fe-S type, tartrate fumarate subfamily, alpha subunit K01677 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 415.0
BYD1_k127_1000231_1 TIGRFAM hydro-lyase, Fe-S type, tartrate fumarate subfamily, beta subunit K01676,K01678 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002487 285.0
BYD1_k127_1000231_2 Lysine methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003301 246.0
BYD1_k127_1000231_3 - - - - 0.0000000000000000000000000000000000000000000005309 168.0
BYD1_k127_1000231_4 COG0840 Methyl-accepting chemotaxis protein K08738 - - 0.000000000000000000000000000000000000000000001307 169.0
BYD1_k127_1000231_5 - - - - 0.000000000000000007942 88.0
BYD1_k127_1000231_6 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.00000000000000009258 81.0
BYD1_k127_10002936_0 PFAM glycosyl transferase family 51 K05366 - 2.4.1.129,3.4.16.4 7.961e-255 810.0
BYD1_k127_10002936_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 608.0
BYD1_k127_10002936_2 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004648 368.0
BYD1_k127_10002936_3 PFAM ABC transporter related K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 344.0
BYD1_k127_10002936_4 oxidase subunit K08738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005542 277.0
BYD1_k127_10002936_5 Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase K05808 - - 0.000000000000000000000000000000000000000000000000000000000000000000003788 239.0
BYD1_k127_10002936_6 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.00000000000000000000000000000000000000000000000000004041 190.0
BYD1_k127_10002936_7 system, fructose subfamily IIA component K02793 - 2.7.1.191 0.000000000000000000000000000000000000000000005275 170.0
BYD1_k127_10054684_0 histidine kinase HAMP region domain protein K03406 - - 1.224e-238 755.0
BYD1_k127_10054684_1 Two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002875 540.0
BYD1_k127_10054684_2 PFAM chorismate K01665 - 2.6.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 387.0
BYD1_k127_10054684_3 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009936 387.0
BYD1_k127_10054684_4 PFAM Aminotransferase, class IV K00826,K02619 - 2.6.1.42,4.1.3.38 0.000000000000000000000000000000000000000000000000002231 192.0
BYD1_k127_10054684_5 PFAM glutamine amidotransferase K01664 - 2.6.1.85 0.0000000000000000000000000000000000000000000000002566 181.0
BYD1_k127_10054684_6 Glycosyl transferases group 1 - - - 0.000000000000000000000000134 120.0
BYD1_k127_10054684_7 chlorophyll binding K03286 - - 0.00000000000000000000008576 106.0
BYD1_k127_10054684_8 Belongs to the ompA family K03286 - - 0.0000000000000000000005441 107.0
BYD1_k127_10054684_9 PFAM Extracellular ligand-binding receptor K01999 - - 0.00001207 49.0
BYD1_k127_10093778_0 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 554.0
BYD1_k127_10093778_1 Belongs to the DegT DnrJ EryC1 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003677 371.0
BYD1_k127_10122444_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1056.0
BYD1_k127_1012981_0 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 5.813e-305 944.0
BYD1_k127_1012981_1 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K06001 - 4.2.1.20 8.835e-228 714.0
BYD1_k127_1012981_2 SMART chemotaxis sensory transducer K03406 - - 3.564e-201 647.0
BYD1_k127_1012981_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008371 512.0
BYD1_k127_1012981_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002689 473.0
BYD1_k127_1012981_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 460.0
BYD1_k127_1012981_6 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 426.0
BYD1_k127_1012981_7 Cellulose biosynthesis protein BcsQ - - - 0.000000000000000000000000000000000000000000000000000000000006478 218.0
BYD1_k127_1012981_8 PFAM ABC transporter related K01996 - - 0.00000000000000000000000000000000000000000000000000000008026 201.0
BYD1_k127_10153534_0 Carbamoyl-phosphate synthetase large chain domain protein K01958 - 6.4.1.1 0.0 1794.0
BYD1_k127_10153534_1 PFAM AMP-dependent synthetase and ligase K00666 - - 1.675e-296 915.0
BYD1_k127_10153534_2 GDP-mannose 4,6 dehydratase - - - 3.715e-196 615.0
BYD1_k127_10153534_3 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 598.0
BYD1_k127_10153534_4 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 458.0
BYD1_k127_10153534_5 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002903 311.0
BYD1_k127_10153534_6 Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001539 263.0
BYD1_k127_10153534_7 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000001352 219.0
BYD1_k127_10153534_8 ATPase (AAA superfamily - - - 0.0000000000000000000000000000000000000000000000000000004739 198.0
BYD1_k127_10153534_9 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000002148 90.0
BYD1_k127_10164035_0 GGGtGRT protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 516.0
BYD1_k127_10164035_1 Psort location Cytoplasmic, score - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 353.0
BYD1_k127_10164035_2 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006162 325.0
BYD1_k127_10167574_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901576 2.7.4.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 338.0
BYD1_k127_10167574_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 311.0
BYD1_k127_10167574_2 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 301.0
BYD1_k127_10167574_3 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000102 261.0
BYD1_k127_10167574_4 Belongs to the universal ribosomal protein uS2 family K02967 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000746 141.0
BYD1_k127_10167574_5 Belongs to the CDS family K00981 - 2.7.7.41 0.00000001047 64.0
BYD1_k127_10186090_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002617 287.0
BYD1_k127_10186090_1 PFAM CheW domain protein K03408 - - 0.000000000000000000000000002108 113.0
BYD1_k127_10202100_0 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 9.933e-196 623.0
BYD1_k127_10202100_1 4Fe-4S dicluster domain K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001371 286.0
BYD1_k127_10202100_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000000000000000000000000000001153 196.0
BYD1_k127_10221282_0 ABC-type polysaccharide polyol phosphate transport system ATPase component K09691 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 378.0
BYD1_k127_10221282_1 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347 351.0
BYD1_k127_10221282_2 ABC-2 type transporter K09690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 338.0
BYD1_k127_10221282_3 PFAM Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 349.0
BYD1_k127_10221282_4 Hypothetical methyltransferase K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 297.0
BYD1_k127_10221282_5 Glycosyltransferase like family 2 K20444 - - 0.000000000000000000000000000003494 140.0
BYD1_k127_10221282_6 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000002495 105.0
BYD1_k127_10221282_7 Belongs to the HesB IscA family - - - 0.00000000000176 69.0
BYD1_k127_10223665_0 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174,K00186 - 1.2.7.11,1.2.7.3,1.2.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004446 568.0
BYD1_k127_10223665_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303 492.0
BYD1_k127_10223665_2 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 405.0
BYD1_k127_10223665_3 Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit K00595 - 2.1.1.132 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 396.0
BYD1_k127_10223665_4 PFAM Peptidase M23 K21471 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 316.0
BYD1_k127_10223665_5 PFAM HhH-GPD family protein K07457 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 288.0
BYD1_k127_10223665_6 PFAM Pyruvate ketoisovalerate oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002231 273.0
BYD1_k127_10223665_7 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 - 1.2.7.3 0.000000000000000000000000000114 117.0
BYD1_k127_10223665_8 Divergent polysaccharide deacetylase K09798 - - 0.00000002093 63.0
BYD1_k127_10261926_0 Nickel-dependent hydrogenase - - - 5.613e-196 620.0
BYD1_k127_10261926_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 511.0
BYD1_k127_10261926_2 Oxidoreductase FAD-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 442.0
BYD1_k127_10261926_3 NADH ubiquinone oxidoreductase, 20 Kd subunit K14128 - 1.8.98.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004588 370.0
BYD1_k127_10261926_4 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 303.0
BYD1_k127_10261926_5 Roadblock/LC7 domain - - - 0.0000000000000000000000000000000000000000001519 162.0
BYD1_k127_10304651_0 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 516.0
BYD1_k127_10304651_1 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 424.0
BYD1_k127_10304651_2 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000004661 196.0
BYD1_k127_10304651_3 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000002334 124.0
BYD1_k127_10304651_4 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000115 105.0
BYD1_k127_10304651_5 Rubredoxin is a small nonheme, iron protein lacking acid-labile sulfide. Its single Fe, chelated to 4 Cys, functions as an electron acceptor and may also stabilize the conformation of the molecule - - - 0.0000000000000000000002603 98.0
BYD1_k127_10304651_6 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000125 61.0
BYD1_k127_10306728_0 Two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008258 502.0
BYD1_k127_10306728_1 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006624 274.0
BYD1_k127_10306728_2 Cold-Shock Protein K03704 - - 0.0000000000000000000000000005276 114.0
BYD1_k127_10316535_0 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1088.0
BYD1_k127_10316535_1 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 1.359e-230 717.0
BYD1_k127_10316535_10 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 303.0
BYD1_k127_10316535_11 Protein of unknown function (DUF1009) K09949 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008836 306.0
BYD1_k127_10316535_12 Histidine kinase K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 314.0
BYD1_k127_10316535_13 PFAM 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase K06898 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 287.0
BYD1_k127_10316535_14 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007356 283.0
BYD1_k127_10316535_15 Transcriptional regulator, LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003567 277.0
BYD1_k127_10316535_16 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006503 263.0
BYD1_k127_10316535_17 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000764 262.0
BYD1_k127_10316535_18 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002963 261.0
BYD1_k127_10316535_19 One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome K02926 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007756 262.0
BYD1_k127_10316535_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.168e-216 679.0
BYD1_k127_10316535_20 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.000000000000000000000000000000000000000000000000000000000000000000002676 237.0
BYD1_k127_10316535_21 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000000000001529 228.0
BYD1_k127_10316535_22 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000001377 222.0
BYD1_k127_10316535_23 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000744 208.0
BYD1_k127_10316535_24 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000000009278 208.0
BYD1_k127_10316535_25 Involved in the binding of tRNA to the ribosomes K02946 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000327 191.0
BYD1_k127_10316535_26 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.000000000000000000000000000000000000000000000005858 173.0
BYD1_k127_10316535_27 binds to the 23S rRNA K02876 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000003619 173.0
BYD1_k127_10316535_28 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000444 171.0
BYD1_k127_10316535_29 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000001214 165.0
BYD1_k127_10316535_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003702 522.0
BYD1_k127_10316535_30 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - 0.0000000000000000000000000000000000000000000144 164.0
BYD1_k127_10316535_31 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000009485 161.0
BYD1_k127_10316535_32 PFAM ribosomal protein L17 K02879 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000001001 148.0
BYD1_k127_10316535_33 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000001413 137.0
BYD1_k127_10316535_34 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000004844 133.0
BYD1_k127_10316535_35 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - 0.000000000000000000000000000000002315 129.0
BYD1_k127_10316535_36 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000008051 118.0
BYD1_k127_10316535_37 filamentous hemagglutinin family N-terminal domain - - - 0.0000000000000000001402 99.0
BYD1_k127_10316535_38 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.000000000000002391 78.0
BYD1_k127_10316535_39 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.000000000000003782 75.0
BYD1_k127_10316535_4 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002407 449.0
BYD1_k127_10316535_40 Ribosomal protein L30 K02907 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000001654 68.0
BYD1_k127_10316535_41 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000001543 61.0
BYD1_k127_10316535_5 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 372.0
BYD1_k127_10316535_6 Poly A polymerase head domain K00970,K00974 - 2.7.7.19,2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007713 378.0
BYD1_k127_10316535_7 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 357.0
BYD1_k127_10316535_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 355.0
BYD1_k127_10316535_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 331.0
BYD1_k127_10321683_0 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004383 313.0
BYD1_k127_10321683_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000003466 228.0
BYD1_k127_10321683_2 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000003769 129.0
BYD1_k127_10322165_0 His Kinase A (phosphoacceptor) domain - - - 1.149e-315 1010.0
BYD1_k127_10322165_1 TIGRFAM glutamate synthase (NADPH), homotetrameric K00266 - 1.4.1.13,1.4.1.14 1.459e-213 672.0
BYD1_k127_10322165_10 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000594 310.0
BYD1_k127_10322165_11 (ABC) transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001549 286.0
BYD1_k127_10322165_12 Belongs to the D-glutamate cyclase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 286.0
BYD1_k127_10322165_13 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000001187 227.0
BYD1_k127_10322165_14 PFAM methyltransferase small K15460 - 2.1.1.223 0.00000000000000000000000000000000000000000000000000000002196 207.0
BYD1_k127_10322165_15 methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000001482 182.0
BYD1_k127_10322165_16 - - - - 0.00000000000000000000000000000000001745 139.0
BYD1_k127_10322165_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000754 592.0
BYD1_k127_10322165_3 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006639 539.0
BYD1_k127_10322165_4 metal-dependent phosphohydrolase HD region K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003899 492.0
BYD1_k127_10322165_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000499 492.0
BYD1_k127_10322165_6 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 483.0
BYD1_k127_10322165_7 PFAM Oxidoreductase FAD NAD(P)-binding K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 433.0
BYD1_k127_10322165_8 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009049 374.0
BYD1_k127_10322165_9 TOBE domain K02019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 331.0
BYD1_k127_10334727_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 541.0
BYD1_k127_10334727_1 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000288 532.0
BYD1_k127_10334727_2 Protein of unknown function (DUF1385) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000311 405.0
BYD1_k127_10334727_3 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000008579 178.0
BYD1_k127_10334727_4 50S ribosomal protein L31 K02909 - - 0.000000000000000000000000000008331 121.0
BYD1_k127_10334727_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.000000000000000000000000002579 113.0
BYD1_k127_10334727_6 COG2963 Transposase and inactivated derivatives - - - 0.00000005592 58.0
BYD1_k127_1036308_0 PFAM sigma-54 factor interaction domain-containing protein - - - 2.049e-198 647.0
BYD1_k127_1036308_1 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 478.0
BYD1_k127_1036308_2 - - - - 0.00000000000000000000000000000005035 127.0
BYD1_k127_1036308_3 Universal stress protein family - - - 0.0000000000000000000000163 105.0
BYD1_k127_1036308_4 Universal stress protein - - - 0.0000000000000000000004754 101.0
BYD1_k127_1037837_0 PFAM AICARFT IMPCHase bienzyme K00602 - 2.1.2.3,3.5.4.10 1.959e-197 624.0
BYD1_k127_1037837_1 aminotransferase class I and II - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 358.0
BYD1_k127_1037837_10 TIGRFAM acetylornithine and succinylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.0000000000000004637 79.0
BYD1_k127_1037837_11 Protein of unknown function (DUF3540) - - - 0.00000000000005123 82.0
BYD1_k127_1037837_2 Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA K07442 - 2.1.1.219,2.1.1.220 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 316.0
BYD1_k127_1037837_3 Alpha-acetolactate decarboxylase K01575 - 4.1.1.5 0.00000000000000000000000000000000000000000000000000000000000000007763 239.0
BYD1_k127_1037837_4 branched-chain amino acid permease (azaleucine resistance) - - - 0.000000000000000000000000000000000000000000000000000000000002305 217.0
BYD1_k127_1037837_5 Dihaem cytochrome c - - - 0.0000000000000000000000000000000000000000000000008352 180.0
BYD1_k127_1037837_6 PFAM 2-hydroxyglutaryl-CoA dehydratase, D-component - - - 0.000000000000000000000000000000000000000000000001769 181.0
BYD1_k127_1037837_7 - - - - 0.000000000000000000000000000002783 132.0
BYD1_k127_1037837_8 PFAM Type IV pilus assembly PilZ - - - 0.000000000000000000001608 104.0
BYD1_k127_1037837_9 branched-chain amino acid - - - 0.00000000000000000002836 98.0
BYD1_k127_10393615_0 ribonuclease, Rne Rng family K08300,K08301 - 3.1.26.12 8.434e-200 633.0
BYD1_k127_10393615_1 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001677 509.0
BYD1_k127_10393615_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007634 360.0
BYD1_k127_10393615_3 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 290.0
BYD1_k127_10393615_4 Belongs to the BI1 family K06890,K19416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001587 282.0
BYD1_k127_10393615_5 OmpA MotB domain protein K02557 - - 0.000000000000000000000000000124 119.0
BYD1_k127_10419026_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 5.833e-257 804.0
BYD1_k127_10419026_1 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes K03116,K03117 - - 0.000000000000002548 81.0
BYD1_k127_10419026_2 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008320,GO:0008565,GO:0009314,GO:0009628,GO:0009977,GO:0015031,GO:0015291,GO:0015399,GO:0015405,GO:0015450,GO:0015833,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022884,GO:0031224,GO:0031226,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042802,GO:0042886,GO:0042887,GO:0043953,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046907,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0065002,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098796,GO:0098797,GO:1904680 - 0.0000000001904 65.0
BYD1_k127_10461846_0 PFAM penicillin-binding protein transpeptidase K03587 - 3.4.16.4 3.264e-200 643.0
BYD1_k127_10461846_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 532.0
BYD1_k127_10461846_10 - - - - 0.000000000000000000007513 96.0
BYD1_k127_10461846_2 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 531.0
BYD1_k127_10461846_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 GO:0000270,GO:0003674,GO:0003824,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008765,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 512.0
BYD1_k127_10461846_4 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 474.0
BYD1_k127_10461846_5 Belongs to the SEDS family K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005384 471.0
BYD1_k127_10461846_6 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004319 410.0
BYD1_k127_10461846_7 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 362.0
BYD1_k127_10461846_8 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 351.0
BYD1_k127_10461846_9 Belongs to the MraZ family K03925 GO:0000976,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031333,GO:0043254,GO:0043565,GO:0044087,GO:0044212,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2000142,GO:2000143,GO:2001141 - 0.000000000000000000000000000000000000000000000000000009991 192.0
BYD1_k127_10502863_0 WG containing repeat - - - 0.000000000000000000000000000000000000000000000000000000005889 211.0
BYD1_k127_10507349_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 8.236e-314 974.0
BYD1_k127_10507349_1 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.559e-262 819.0
BYD1_k127_10507349_10 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000006396 203.0
BYD1_k127_10507349_11 Serine/threonine phosphatases, family 2C, catalytic domain K01090,K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000006728 190.0
BYD1_k127_10507349_12 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000006091 146.0
BYD1_k127_10507349_13 - - - - 0.00000000000000000000002165 106.0
BYD1_k127_10507349_2 TIGRFAM Threonine synthase K01733 - 4.2.3.1 4.103e-226 711.0
BYD1_k127_10507349_3 TIGRFAM Penicillin-binding protein 2 K05515 - 3.4.16.4 5.368e-224 710.0
BYD1_k127_10507349_4 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 607.0
BYD1_k127_10507349_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 511.0
BYD1_k127_10507349_6 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 423.0
BYD1_k127_10507349_7 PFAM Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002036 274.0
BYD1_k127_10507349_8 response to heat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008392 264.0
BYD1_k127_10507349_9 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006356 256.0
BYD1_k127_10523206_0 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 8.624e-248 779.0
BYD1_k127_10523206_1 Endoribonuclease that initiates mRNA decay K18682 - - 2.801e-236 743.0
BYD1_k127_10523206_10 4Fe-4S ferredoxin, iron-sulfur binding family protein - - - 0.000000000000003734 81.0
BYD1_k127_10523206_2 PFAM sigma-54 factor interaction domain-containing protein K02584 - - 6.733e-215 679.0
BYD1_k127_10523206_3 Penicillin-Binding Protein C-terminus Family K05367 - 2.4.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005534 623.0
BYD1_k127_10523206_4 Fumarate reductase flavoprotein C-term - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005693 366.0
BYD1_k127_10523206_5 Pyruvate ferredoxin/flavodoxin oxidoreductase K00180 - 1.2.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000002911 245.0
BYD1_k127_10523206_6 PFAM asparagine synthase K06864 - - 0.0000000000000000000000000000000000000000000000007655 185.0
BYD1_k127_10523206_7 repeat-containing protein - - - 0.0000000000000000000000000000000000001126 150.0
BYD1_k127_10523206_8 PFAM Type IV pilus assembly PilZ - - - 0.00000000000000000000008583 106.0
BYD1_k127_10523206_9 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000008588 92.0
BYD1_k127_10528354_0 drug resistance transporter, EmrB QacA subfamily K03446 - - 3.14e-213 674.0
BYD1_k127_10528354_1 sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 9.543e-205 642.0
BYD1_k127_10528354_10 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000002855 108.0
BYD1_k127_10528354_11 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000002666 55.0
BYD1_k127_10528354_2 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 520.0
BYD1_k127_10528354_3 PFAM secretion protein HlyD K03543 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003528 386.0
BYD1_k127_10528354_4 PFAM Three-deoxy-D-manno-octulosonic-acid transferase K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004167 353.0
BYD1_k127_10528354_5 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 341.0
BYD1_k127_10528354_6 Cell wall formation K01921 - 6.3.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 334.0
BYD1_k127_10528354_7 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 320.0
BYD1_k127_10528354_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000196 278.0
BYD1_k127_10528354_9 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001299 265.0
BYD1_k127_10538352_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 381.0
BYD1_k127_10538352_1 PFAM Glycosyl transferase family 2 K16650 - 2.4.1.288 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 349.0
BYD1_k127_10538352_2 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007945 321.0
BYD1_k127_10538352_3 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 301.0
BYD1_k127_10564773_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 4.85e-261 814.0
BYD1_k127_10564773_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00382 - 1.8.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 437.0
BYD1_k127_10564773_10 PFAM Tetratricopeptide repeat - - - 0.00004279 51.0
BYD1_k127_10564773_2 PFAM Cytochrome C biogenesis protein transmembrane region K06196 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 369.0
BYD1_k127_10564773_3 Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11785 - - 0.0000000000000000000000000000000000000000000000000000000000000000000259 241.0
BYD1_k127_10564773_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000001657 233.0
BYD1_k127_10564773_5 PFAM Maf family protein K06287 - - 0.000000000000000000000000000000000000000000000001152 182.0
BYD1_k127_10564773_6 PFAM biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000000000000000000000000000000000000000002031 184.0
BYD1_k127_10564773_7 PFAM Thioredoxin K03671 - - 0.0000000000000000000000000000000000000000000646 163.0
BYD1_k127_10564773_8 Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2) K11783 - 3.2.2.26 0.00000000000000000000000000000000007857 139.0
BYD1_k127_10564773_9 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.0000000000000000000000000000005868 126.0
BYD1_k127_10574463_0 PFAM Peptidase M18, aminopeptidase I K01267 - 3.4.11.21 2.168e-212 668.0
BYD1_k127_10574463_1 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 452.0
BYD1_k127_10574463_2 Sulfotransferase domain - - - 0.0000000000000000000000000000000000000000000000000000003303 208.0
BYD1_k127_10574463_3 lyase activity - - - 0.00000000000000000000000000000000000000000000000273 181.0
BYD1_k127_10585106_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 0.0 1106.0
BYD1_k127_10585106_1 Conserved hypothetical protein 698 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002631 583.0
BYD1_k127_10593613_0 response regulator, receiver K03415 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 409.0
BYD1_k127_10593613_1 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K02945,K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 323.0
BYD1_k127_10593613_2 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 295.0
BYD1_k127_10593613_3 PFAM Rubredoxin-type Fe(Cys)4 protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.00000000000000008689 80.0
BYD1_k127_10596876_0 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 490.0
BYD1_k127_10596876_1 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001375 426.0
BYD1_k127_10596876_2 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008071 346.0
BYD1_k127_10596876_3 ATPases associated with a variety of cellular activities K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007058 317.0
BYD1_k127_10596876_4 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 300.0
BYD1_k127_10596876_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding - - - 0.0000000000000000000000000000000000000000000000000000000000000703 215.0
BYD1_k127_10596876_6 PFAM Mammalian cell entry related K02067 - - 0.00000000000000000000000000000000000000000001822 173.0
BYD1_k127_10596876_7 response regulator - - - 0.00000000000000000000000000000000009778 138.0
BYD1_k127_10596876_8 Cytochrome c554 and c-prime - - - 0.000000000000000000000000000001373 124.0
BYD1_k127_10596876_9 ABC-type transport auxiliary lipoprotein component K18480 - - 0.00000000000000000000006685 107.0
BYD1_k127_10656557_0 TIGRFAM Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004181 586.0
BYD1_k127_10656557_1 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 577.0
BYD1_k127_10656557_10 PFAM regulatory protein TetR K16137 - - 0.00000000000000000000000000000000000000000000007315 175.0
BYD1_k127_10656557_11 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000000000000000000000000000009094 134.0
BYD1_k127_10656557_12 - - - - 0.000000000000000000000000186 115.0
BYD1_k127_10656557_13 PFAM acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000000963 106.0
BYD1_k127_10656557_14 PFAM regulatory protein AsnC Lrp family - - - 0.00000000000000000000007784 104.0
BYD1_k127_10656557_15 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000004749 97.0
BYD1_k127_10656557_16 Glutaredoxin K03676 - - 0.00000000000000008689 80.0
BYD1_k127_10656557_17 PFAM Protein kinase domain - - - 0.000000001489 71.0
BYD1_k127_10656557_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 581.0
BYD1_k127_10656557_3 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit K11690 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 507.0
BYD1_k127_10656557_4 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 479.0
BYD1_k127_10656557_5 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001488 462.0
BYD1_k127_10656557_6 FMN binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005343 277.0
BYD1_k127_10656557_7 PFAM ApbE family lipoprotein K09740 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004689 265.0
BYD1_k127_10656557_8 Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000205 276.0
BYD1_k127_10656557_9 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000007048 177.0
BYD1_k127_10697298_0 Cysteine-rich domain - - - 5.402e-231 720.0
BYD1_k127_10697298_1 TamB, inner membrane protein subunit of TAM complex K09800 - - 5.609e-214 713.0
BYD1_k127_10697298_10 PFAM Peptidase S24 S26A S26B, conserved region - - - 0.00000000000000000000000000000000000000000000001412 182.0
BYD1_k127_10697298_12 PFAM Metal-dependent phosphohydrolase, HD - - - 0.0000000000000000000000002375 108.0
BYD1_k127_10697298_13 - - - - 0.0000000000000000000000004311 111.0
BYD1_k127_10697298_14 - - - - 0.0000000000002409 81.0
BYD1_k127_10697298_15 Mor transcription activator family - - - 0.000000000006074 68.0
BYD1_k127_10697298_16 Tetratricopeptide repeat - - - 0.00000001918 66.0
BYD1_k127_10697298_17 HD domain - - - 0.00000162 55.0
BYD1_k127_10697298_2 POTRA domain TamA domain 1 K07277,K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005754 554.0
BYD1_k127_10697298_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 526.0
BYD1_k127_10697298_4 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 458.0
BYD1_k127_10697298_5 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 348.0
BYD1_k127_10697298_6 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004166 343.0
BYD1_k127_10697298_7 Protein of unknown function (DUF3696) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 302.0
BYD1_k127_10697298_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002836 241.0
BYD1_k127_10697298_9 X-Pro dipeptidyl-peptidase (S15 family) K06889 - - 0.00000000000000000000000000000000000000000000000000000000005034 221.0
BYD1_k127_10719228_0 Integral membrane sensor signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 383.0
BYD1_k127_10752359_0 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003849 527.0
BYD1_k127_10752359_1 PFAM FAD binding domain of DNA photolyase K01669 - 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001735 280.0
BYD1_k127_10752359_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003157 263.0
BYD1_k127_10752359_3 Protein of unknown function (DUF2917) - - - 0.00000376 54.0
BYD1_k127_10759731_0 PFAM Glycosyl transferase family 2 K00694 - 2.4.1.12 2.014e-248 776.0
BYD1_k127_10759731_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 543.0
BYD1_k127_10759731_10 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000005611 88.0
BYD1_k127_10759731_11 CutA1 divalent ion tolerance protein K03926 - - 0.000000004588 57.0
BYD1_k127_10759731_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 495.0
BYD1_k127_10759731_3 PFAM PfkB domain protein K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 404.0
BYD1_k127_10759731_4 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 396.0
BYD1_k127_10759731_5 Belongs to the glycosyl hydrolase 26 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004666 323.0
BYD1_k127_10759731_6 - - - - 0.0000000000000000000000000000000000000000000000000000000006228 211.0
BYD1_k127_10759731_7 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.000000000000000000000000000000000000000000000004914 179.0
BYD1_k127_10759731_8 SMART Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000001503 170.0
BYD1_k127_10759731_9 Tetratricopeptide repeat - - - 0.000000000000000000000000006308 119.0
BYD1_k127_1077395_0 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 GO:0003674,GO:0003824,GO:0004478,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016740,GO:0016765,GO:0044424,GO:0044444,GO:0044464 2.5.1.6 4.058e-210 657.0
BYD1_k127_1077395_1 PFAM Cys Met metabolism K01739,K01760,K01761 - 2.5.1.48,4.4.1.11,4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 442.0
BYD1_k127_1077395_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003649 330.0
BYD1_k127_1077395_3 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007851 328.0
BYD1_k127_1077395_4 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005816 305.0
BYD1_k127_1077395_5 - - - - 0.0000000000000000000000000000001503 126.0
BYD1_k127_1077395_6 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000203 110.0
BYD1_k127_1077395_7 Involved in the tonB-independent uptake of proteins - - - 0.00000000002025 78.0
BYD1_k127_1077395_8 Protein of unknown function (DUF721) - - - 0.00000000006855 69.0
BYD1_k127_1077395_9 Domains in Na-Ca exchangers and integrin-beta4 K01406 - 3.4.24.40 0.0000000001406 75.0
BYD1_k127_10914796_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 5.718e-203 648.0
BYD1_k127_10914796_1 Tetratricopeptide repeats - - - 0.00000000000000000000000636 113.0
BYD1_k127_10914796_2 Ion channel - - - 0.000000000000001028 83.0
BYD1_k127_10940306_0 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 402.0
BYD1_k127_10940306_1 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 384.0
BYD1_k127_10940306_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000723 379.0
BYD1_k127_10957885_0 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000008929 227.0
BYD1_k127_10957885_1 - - - - 0.0000000000000000005491 91.0
BYD1_k127_10957885_2 - - - - 0.00000004483 60.0
BYD1_k127_10989194_0 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.000000000000000000000000000000000000000000000000001466 199.0
BYD1_k127_10989194_1 PFAM transposase YhgA family protein - - - 0.000000000000000000000000000000000000003318 151.0
BYD1_k127_1102100_0 phosphate-selective porin O and P - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 350.0
BYD1_k127_1102100_1 - - - - 0.0000000000000000000000000001668 119.0
BYD1_k127_11080703_0 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 574.0
BYD1_k127_11080703_1 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005871 376.0
BYD1_k127_11080703_2 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000009527 224.0
BYD1_k127_11080703_3 Biotin-protein ligase, N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000003227 223.0
BYD1_k127_11080703_4 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000000001096 214.0
BYD1_k127_11109867_0 radical SAM domain protein K04070 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 353.0
BYD1_k127_11109867_1 Belongs to the ABC transporter superfamily K02032 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 332.0
BYD1_k127_11109867_2 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 312.0
BYD1_k127_11109867_3 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000003696 269.0
BYD1_k127_11109867_4 - - - - 0.00000000000000000007288 95.0
BYD1_k127_11117784_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004968 469.0
BYD1_k127_11117784_1 PFAM glycosyl transferase family 11 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 290.0
BYD1_k127_11117784_2 Glycosyl transferase, group 2 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000004114 224.0
BYD1_k127_11118158_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 470.0
BYD1_k127_11118158_1 PFAM response regulator receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000001843 227.0
BYD1_k127_11118158_2 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000000002326 210.0
BYD1_k127_11118158_3 Cellulose biosynthesis protein BcsQ K03496 - - 0.0000000001803 62.0
BYD1_k127_11140337_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1184.0
BYD1_k127_11140337_1 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009344 462.0
BYD1_k127_11140337_2 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005887 430.0
BYD1_k127_11140337_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 360.0
BYD1_k127_11140337_4 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005277 272.0
BYD1_k127_11140337_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000426 146.0
BYD1_k127_11140337_6 PFAM MgtE intracellular - - - 0.000000000000000000000000000000001383 140.0
BYD1_k127_11140337_7 TLC ATP/ADP transporter K03301 - - 0.0000000000000000000000004229 123.0
BYD1_k127_11140337_8 TIGRFAM flagellar export protein FliJ K02413 - - 0.000000000000000000001445 101.0
BYD1_k127_11140337_9 Cyclic nucleotide-binding protein - - - 0.000004518 54.0
BYD1_k127_11168180_0 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000076 366.0
BYD1_k127_11168180_1 SMART metal-dependent phosphohydrolase HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001137 258.0
BYD1_k127_11168180_2 CheD chemotactic sensory transduction K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000789 203.0
BYD1_k127_11168180_3 cheY-homologous receiver domain K03413 - - 0.0000000000000000000000000000000000001137 145.0
BYD1_k127_11168180_4 - - - - 0.0000000001487 70.0
BYD1_k127_11168180_5 - - - - 0.000001607 55.0
BYD1_k127_11209191_0 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002546 622.0
BYD1_k127_11209191_1 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009069 375.0
BYD1_k127_11209191_2 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935,K02169 - 2.1.1.197,6.3.3.3 0.000000000000000000000000000000000000000000000000001468 190.0
BYD1_k127_11209191_3 PFAM Thioesterase superfamily K02614 - - 0.000000000000000000000000000005557 126.0
BYD1_k127_11209191_4 Type II secretion system K02653 - - 0.00000000000000000000003881 99.0
BYD1_k127_11209191_5 PFAM BFD domain protein 2Fe-2S -binding domain protein - - - 0.0000000000284 66.0
BYD1_k127_11209191_6 - - - - 0.000000001171 64.0
BYD1_k127_1121684_0 Uncharacterized protein conserved in bacteria (DUF2169) - - - 1.302e-211 687.0
BYD1_k127_1121684_1 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000156 391.0
BYD1_k127_1121684_2 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000002384 232.0
BYD1_k127_1121684_3 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000005713 203.0
BYD1_k127_1121684_4 Domain of unknown function (DUF4150) - - - 0.00000000000000000000000000000000000000000000008119 171.0
BYD1_k127_1121684_5 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.0000000000000000000001866 97.0
BYD1_k127_11227781_0 (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000388 492.0
BYD1_k127_11227781_1 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 355.0
BYD1_k127_11227781_2 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000002627 222.0
BYD1_k127_11227781_3 PFAM DoxX family protein - - - 0.0000000000000000000000000000000001938 139.0
BYD1_k127_11227781_4 4Fe-4S dicluster domain - - - 0.0000000000000000000000001871 109.0
BYD1_k127_11286876_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K02405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 325.0
BYD1_k127_11286876_1 Flagellar basal body-associated protein FliL K02415 - - 0.0000000000000000000000000000000000000000155 161.0
BYD1_k127_11286876_2 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000003015 138.0
BYD1_k127_1131934_0 PFAM Na H antiporter NhaB K03314 - - 3.463e-194 618.0
BYD1_k127_1131934_1 Belongs to the GARS family K01945 - 6.3.4.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008676 557.0
BYD1_k127_1131934_2 Metallo-beta-lactamase superfamily K00784 - 3.1.26.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001311 479.0
BYD1_k127_1131934_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006093 325.0
BYD1_k127_1131934_4 PFAM Peptidase S24 S26A S26B, conserved region - - - 0.00000000000000006251 89.0
BYD1_k127_1131934_5 O-methyltransferase activity - - - 0.0000271 53.0
BYD1_k127_11322898_0 TIGRFAM ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537,K12952 - 3.6.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005793 606.0
BYD1_k127_11322898_1 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 378.0
BYD1_k127_11322898_2 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000229 260.0
BYD1_k127_11424975_0 PFAM homoserine dehydrogenase K00003 - 1.1.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 434.0
BYD1_k127_11424975_1 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00033,K00616,K01810,K08300,K13810 - 1.1.1.343,1.1.1.44,2.2.1.2,3.1.26.12,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 356.0
BYD1_k127_11424975_2 haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000002147 160.0
BYD1_k127_11424975_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000005979 147.0
BYD1_k127_11459952_0 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 0.000000000000000000000000000000000000000000000000000000000009117 209.0
BYD1_k127_11459952_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.00000000000000000000000000000000000000001028 160.0
BYD1_k127_11459952_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000001672 134.0
BYD1_k127_11493630_0 FAD linked oxidase domain protein - - - 7.583e-287 900.0
BYD1_k127_11493630_1 Malic enzyme, NAD binding domain K00027 - 1.1.1.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001634 496.0
BYD1_k127_11493630_2 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 336.0
BYD1_k127_11493630_3 Transcriptional regulator K07722 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000075 229.0
BYD1_k127_11493630_4 Glutamyl glutaminyl-tRNA synthetase, class Ic, anti-codon binding domain K01886 - 6.1.1.18 0.0000000000000000000000000000000000003458 141.0
BYD1_k127_11497697_0 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 467.0
BYD1_k127_11497697_1 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 374.0
BYD1_k127_11497697_2 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000007262 226.0
BYD1_k127_11509891_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 8.703e-311 963.0
BYD1_k127_11509891_1 Phosphoglucomutase phosphomannomutase, alpha beta alpha domain II K01840,K15778 - 5.4.2.2,5.4.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004672 612.0
BYD1_k127_11509891_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007765 287.0
BYD1_k127_11509891_11 ligase activity, forming carbon-carbon bonds - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002322 273.0
BYD1_k127_11509891_12 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - 0.000000000000000000000000000000000000000000000000000000000000000002981 229.0
BYD1_k127_11509891_13 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000007188 246.0
BYD1_k127_11509891_14 Belongs to the pseudouridine synthase RluA family K06180 - 5.4.99.23 0.0000000000000000000000000000000000000000000000000000000001264 216.0
BYD1_k127_11509891_15 UDP-N-acetylglucosamine 2-epimerase K01791,K13019 - 5.1.3.14,5.1.3.23 0.000000000000000000000000000000000000000000000000000003124 206.0
BYD1_k127_11509891_16 Belongs to the thioredoxin family K03671 - - 0.000000000000000000000000000000000000000000000000000007607 190.0
BYD1_k127_11509891_17 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000000000000000000000000001091 197.0
BYD1_k127_11509891_18 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - 0.0000000000000000000000000000000000000000000249 164.0
BYD1_k127_11509891_19 PFAM flagellar protein FliS K02422 - - 0.000000000000000000000000000000000000000001487 166.0
BYD1_k127_11509891_2 Thiamine biosynthesis protein ThiC K03147 - 4.1.99.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002284 550.0
BYD1_k127_11509891_20 Bacterial protein of unknown function (DUF882) - - - 0.0000000000000000000000000001111 123.0
BYD1_k127_11509891_21 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000001001 101.0
BYD1_k127_11509891_22 Heavy-metal resistance K07803 - - 0.00000000000007289 79.0
BYD1_k127_11509891_23 TIGRFAM sulfate adenylyltransferase K00958,K13811 - 2.7.1.25,2.7.7.4 0.0000000000001712 70.0
BYD1_k127_11509891_3 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 526.0
BYD1_k127_11509891_4 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002502 522.0
BYD1_k127_11509891_5 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 446.0
BYD1_k127_11509891_6 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 406.0
BYD1_k127_11509891_7 Pfam:DUF342 K09749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009727 400.0
BYD1_k127_11509891_8 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002184 378.0
BYD1_k127_11509891_9 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004073 358.0
BYD1_k127_11551453_0 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005095 418.0
BYD1_k127_11551453_1 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001827 351.0
BYD1_k127_11551453_2 Belongs to the PdxA family K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 318.0
BYD1_k127_11551453_3 inositol 2-dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 314.0
BYD1_k127_11551453_4 PFAM nucleoside recognition domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005917 311.0
BYD1_k127_11551453_5 TIGRFAM ABC transporter, substrate-binding protein, aliphatic sulfonates family K02051,K15553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005373 274.0
BYD1_k127_11551453_6 PFAM regulatory protein LysR K02019 - - 0.000000000000000000000000000001106 129.0
BYD1_k127_115760_0 Catalase K03781 - 1.11.1.6 4.628e-303 931.0
BYD1_k127_115760_1 PFAM Type II secretion system protein E K02652 - - 2.876e-197 630.0
BYD1_k127_115760_10 PFAM NUDIX hydrolase K03574 - 3.6.1.55 0.00000000000000000000000000000000001046 139.0
BYD1_k127_115760_2 Cell shape determining protein MreB Mrl K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002068 508.0
BYD1_k127_115760_3 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002262 518.0
BYD1_k127_115760_4 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001369 493.0
BYD1_k127_115760_5 response regulator, receiver K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 431.0
BYD1_k127_115760_6 TIGRFAM signal peptide peptidase SppA, 36K type K04773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 322.0
BYD1_k127_115760_7 GAF domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002296 296.0
BYD1_k127_115760_8 Belongs to the Fur family K09825 - - 0.00000000000000000000000000000000000000000000000000000002489 200.0
BYD1_k127_115760_9 PFAM thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000001303 200.0
BYD1_k127_11579806_0 histidine kinase HAMP region domain protein K13598 - 2.7.13.3 7.598e-247 782.0
BYD1_k127_11579806_1 PFAM AMP-dependent synthetase and ligase K01895 - 6.2.1.1 4.633e-240 751.0
BYD1_k127_11579806_2 PFAM sigma-54 factor interaction domain-containing protein K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 607.0
BYD1_k127_11579806_3 PFAM peptidase M24 K01262,K01271 - 3.4.11.9,3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 527.0
BYD1_k127_11579806_4 PFAM Oligosaccharyl transferase STT3 subunit K07151 - 2.4.99.18 0.000000000000000000000000000000000000000179 162.0
BYD1_k127_11579806_5 Domain of unknown function (DUF4390) - - - 0.0000000000000000000000005397 114.0
BYD1_k127_1158364_0 PFAM Orn DAP Arg decarboxylase 2 K01586 - 4.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000003557 258.0
BYD1_k127_1158364_1 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000001575 248.0
BYD1_k127_1158364_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006718 235.0
BYD1_k127_1158364_3 Type II secretion system (T2SS), protein G K02456 - - 0.0000000000000000000000000000000000000000000000000000000463 200.0
BYD1_k127_1158364_4 S-adenosylmethionine decarboxylase - - - 0.00000000000000000000000000000000000000000000000434 175.0
BYD1_k127_1158364_5 Prokaryotic N-terminal methylation motif K02459 - - 0.00000000000000000000001172 108.0
BYD1_k127_1158364_6 - - - - 0.0000000000000003155 85.0
BYD1_k127_1158364_7 Type II secretion system (T2SS), protein K K02460 - - 0.00000000003637 69.0
BYD1_k127_1158364_8 Prokaryotic N-terminal methylation motif - - - 0.00005166 50.0
BYD1_k127_11593627_0 PFAM histone deacetylase superfamily K04768 - - 3.113e-211 664.0
BYD1_k127_11593627_1 PFAM Hydantoinase oxoprolinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 418.0
BYD1_k127_11623585_0 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 409.0
BYD1_k127_11623585_1 Cobyrinic acid ac-diamide synthase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004481 383.0
BYD1_k127_11623585_2 CobQ/CobB/MinD/ParA nucleotide binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005966 380.0
BYD1_k127_11623585_3 Dinitrogenase iron-molybdenum cofactor biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004364 254.0
BYD1_k127_11623585_4 PFAM Dinitrogenase iron-molybdenum cofactor biosynthesis - - - 0.000000000000000000000000000000000000000000000007748 174.0
BYD1_k127_11623585_5 SMART ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000228 138.0
BYD1_k127_11623585_6 Belongs to the UPF0251 family - - - 0.0000000000000000000000000001274 119.0
BYD1_k127_11623585_7 Major facilitator superfamily MFS_1 K02445 - - 0.0000000000000000000002121 100.0
BYD1_k127_11669503_0 type VI secretion ATPase, ClpV1 family K11907 - - 0.0 1088.0
BYD1_k127_11669503_1 TIGRFAM Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.628e-218 691.0
BYD1_k127_11669503_2 membrane transporter protein K07090 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 368.0
BYD1_k127_11669503_3 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K11392,K21970 - 2.1.1.178 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 376.0
BYD1_k127_11669503_4 PFAM Acyl transferase K00645 - 2.3.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 329.0
BYD1_k127_11669503_5 PFAM Desulfoferrodoxin ferrous iron-binding region K05919 - 1.15.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000001303 242.0
BYD1_k127_11669503_6 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K09765 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000001722 241.0
BYD1_k127_11669503_7 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.00000000000000000000000000000000000000000000000007963 183.0
BYD1_k127_11669503_8 CBS domain containing protein - - - 0.00000000000000000000000000000000000000000003275 166.0
BYD1_k127_11669503_9 PBP superfamily domain K02040 - - 0.00000000000000000000000002374 114.0
BYD1_k127_11670598_0 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 599.0
BYD1_k127_11670598_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 334.0
BYD1_k127_11670598_2 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001091 291.0
BYD1_k127_11670598_3 Required for formate dehydrogenase (FDH) activity K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000008921 233.0
BYD1_k127_11670598_4 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000006271 230.0
BYD1_k127_11670598_5 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000008413 175.0
BYD1_k127_11670598_6 Polysaccharide biosynthesis protein K15894 - 4.2.1.115 0.00000000000000000000000000000000000000001257 169.0
BYD1_k127_11670598_7 Cysteine rich repeat - - - 0.0000000000000000000001575 101.0
BYD1_k127_11670598_8 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000008468 60.0
BYD1_k127_11670598_9 acetyltransferase - - - 0.0001693 52.0
BYD1_k127_11675996_0 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004407 393.0
BYD1_k127_11675996_1 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005603 375.0
BYD1_k127_11675996_2 PFAM periplasmic binding protein K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006905 279.0
BYD1_k127_11675996_3 PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K03394 - 2.1.1.130,2.1.1.151 0.0000000000000000000000000000000000000000000000000000000000000000003465 235.0
BYD1_k127_11675996_4 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000001087 214.0
BYD1_k127_11675996_5 PFAM ABC transporter K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000004126 208.0
BYD1_k127_11675996_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000002573 112.0
BYD1_k127_11726638_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 554.0
BYD1_k127_11726638_1 Tetratricopeptide repeat - - - 0.00000000000001079 82.0
BYD1_k127_11814459_0 Conserved region in glutamate synthase - - - 1.342e-292 903.0
BYD1_k127_11814459_1 PFAM Nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 1.561e-248 771.0
BYD1_k127_11814459_10 Domain of unknown function (DUF4911) - - - 0.000000000000009555 78.0
BYD1_k127_11814459_11 PFAM Nickel-dependent hydrogenase, large subunit K14126 - 1.8.98.5 0.000002675 49.0
BYD1_k127_11814459_12 4Fe-4S dicluster domain K00196,K05796 - - 0.000004807 51.0
BYD1_k127_11814459_13 Biotin-lipoyl like - - - 0.00004545 56.0
BYD1_k127_11814459_2 PFAM amine oxidase K01854 - 5.4.99.9 5.782e-202 637.0
BYD1_k127_11814459_3 PFAM peptidase M24 K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002835 428.0
BYD1_k127_11814459_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001219 269.0
BYD1_k127_11814459_5 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000001483 208.0
BYD1_k127_11814459_6 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000002149 179.0
BYD1_k127_11814459_7 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000002793 147.0
BYD1_k127_11814459_8 PFAM NADH ubiquinone K14128 - 1.8.98.5 0.00000000000000000000000000001701 117.0
BYD1_k127_11814459_9 - - - - 0.0000000000000000000000044 106.0
BYD1_k127_11845988_0 PFAM Carboxylyase-related protein K03182 - 4.1.1.98 1.614e-269 836.0
BYD1_k127_11845988_1 PFAM Nickel-dependent hydrogenase, large subunit K06281 - 1.12.99.6 1.258e-243 759.0
BYD1_k127_11845988_11 Signal transduction histidine kinase, nitrogen specific K02668 - 2.7.13.3 0.00000000000003001 78.0
BYD1_k127_11845988_12 KTSC domain - - - 0.000000003026 61.0
BYD1_k127_11845988_13 Phage integrase family - - - 0.00000001025 61.0
BYD1_k127_11845988_15 actin binding - - - 0.000000313 55.0
BYD1_k127_11845988_16 PFAM helix-turn-helix domain protein - - - 0.0007178 45.0
BYD1_k127_11845988_2 small subunit K06282 - 1.12.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 451.0
BYD1_k127_11845988_3 Belongs to the UPF0173 family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 311.0
BYD1_k127_11845988_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 299.0
BYD1_k127_11845988_5 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 301.0
BYD1_k127_11845988_6 TIGRFAM molybdenum cofactor synthesis domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000009674 234.0
BYD1_k127_11845988_7 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000002065 223.0
BYD1_k127_11845988_8 Recombinational DNA repair protein, rece pathway - - - 0.000000000000000000000000000000000000000000000000000007265 207.0
BYD1_k127_11845988_9 Exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000006955 152.0
BYD1_k127_11890567_0 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.217e-197 626.0
BYD1_k127_11890567_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001025 489.0
BYD1_k127_11890567_2 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002641 363.0
BYD1_k127_11890567_3 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002223 229.0
BYD1_k127_11890567_4 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000001674 173.0
BYD1_k127_11890567_5 - - - - 0.0000000000000000000000000000000000004535 151.0
BYD1_k127_11890567_6 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.00000000000000000000000000001143 120.0
BYD1_k127_11890567_7 - - - - 0.0000000000000000000000004039 110.0
BYD1_k127_11909341_0 phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 1.052e-239 751.0
BYD1_k127_11909341_1 Belongs to the FPP GGPP synthase family K02523,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29,2.5.1.90 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000107 329.0
BYD1_k127_11909341_2 TIGRFAM Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003976 254.0
BYD1_k127_11909341_3 PFAM SEC-C motif K09858 - - 0.0000000000000000000000000000000000000000000000000000000000001182 216.0
BYD1_k127_11941828_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 2.687e-274 854.0
BYD1_k127_11941828_1 Belongs to the GPI family K01810 - 5.3.1.9 4.295e-256 799.0
BYD1_k127_11941828_10 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000000000002687 83.0
BYD1_k127_11941828_11 Protein of unknown function (DUF465) K09794 - - 0.00000000000000003031 85.0
BYD1_k127_11941828_12 mRNA binding K07339 - - 0.00000000000000003081 82.0
BYD1_k127_11941828_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007199 533.0
BYD1_k127_11941828_3 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042,K11528 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 502.0
BYD1_k127_11941828_4 Ribosomal protein L11 methyltransferase K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003724 269.0
BYD1_k127_11941828_5 TIGRFAM Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000005018 244.0
BYD1_k127_11941828_6 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000003774 189.0
BYD1_k127_11941828_7 YGGT family K02221 - - 0.00000000000000000000000000000000001645 138.0
BYD1_k127_11941828_8 transporter antisigma-factor antagonist STAS K04749,K06378 - - 0.000000000000000000000000000005534 121.0
BYD1_k127_11941828_9 Belongs to the UPF0235 family K09131 - - 0.00000000000000000005493 93.0
BYD1_k127_1195153_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1315.0
BYD1_k127_1195153_1 zinc finger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007488 599.0
BYD1_k127_1195153_2 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012,K16180 - 2.8.1.6,5.4.99.58 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000731 305.0
BYD1_k127_1195153_3 TPR repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000111 258.0
BYD1_k127_11959726_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 8.413e-213 673.0
BYD1_k127_11959726_1 PFAM response regulator receiver - - - 0.000000000000000000000000000000000000000000000000000000000000003698 231.0
BYD1_k127_11959726_2 - - - - 0.00000000000000000000000000000000000000000000000000001663 196.0
BYD1_k127_11959726_3 PFAM sulfate transporter K03321 - - 0.00000000000000000003988 92.0
BYD1_k127_12001264_0 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 426.0
BYD1_k127_12001264_1 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004695 286.0
BYD1_k127_12001264_2 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003349 288.0
BYD1_k127_12001264_3 PFAM cobalamin (vitamin B12) biosynthesis CbiG K02189 - 3.7.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004243 279.0
BYD1_k127_12001264_4 Chemotaxis phosphatase CheX K03409 - - 0.000000000000000000000000000000000000000000000000000000000001175 213.0
BYD1_k127_12001264_5 PFAM Type IV pilus assembly PilZ - - - 0.000000000000000000000000000000000000000000000003574 181.0
BYD1_k127_12001264_6 response regulator, receiver K03413 - - 0.00000000000000000000000000001427 135.0
BYD1_k127_12015619_0 PFAM ABC transporter K06148,K12541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003324 556.0
BYD1_k127_12015619_1 Uncharacterized protein conserved in bacteria (DUF2062) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 460.0
BYD1_k127_12015619_10 Thioesterase-like superfamily K07107 - - 0.00000000000000000000000000000000000000000000000004713 184.0
BYD1_k127_12015619_11 Beta-ketoacyl synthase, N-terminal domain K09458 - 2.3.1.179 0.000000000000000000000000000000103 138.0
BYD1_k127_12015619_12 - - - - 0.000000000000000000000000000003235 121.0
BYD1_k127_12015619_13 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.00000000000000000000000000006067 128.0
BYD1_k127_12015619_14 - - - - 0.00000000000000000000005942 103.0
BYD1_k127_12015619_15 Phosphopantetheine attachment site K02078 - - 0.000000000000000000001004 98.0
BYD1_k127_12015619_16 Hemerythrin HHE cation binding domain - - - 0.000000000000000000004339 100.0
BYD1_k127_12015619_17 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity - - - 0.00000000002485 71.0
BYD1_k127_12015619_18 dehydratase - - - 0.00000000006077 68.0
BYD1_k127_12015619_19 Transposase IS200 like K07491 - - 0.000000003717 58.0
BYD1_k127_12015619_2 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 436.0
BYD1_k127_12015619_20 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.000003051 55.0
BYD1_k127_12015619_3 SMART Elongator protein 3 MiaB NifB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004679 404.0
BYD1_k127_12015619_4 Beta-ketoacyl synthase, C-terminal domain K00647,K09458 - 2.3.1.179,2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 378.0
BYD1_k127_12015619_5 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000304 313.0
BYD1_k127_12015619_6 lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003915 286.0
BYD1_k127_12015619_7 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003972 264.0
BYD1_k127_12015619_8 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000001999 207.0
BYD1_k127_12015619_9 Phosphate acyltransferases K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000004459 203.0
BYD1_k127_1204517_0 Protein of unknown function (DUF401) K09133 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 344.0
BYD1_k127_1204517_1 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 331.0
BYD1_k127_1204517_2 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000000000000000000000000000007273 159.0
BYD1_k127_1204517_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000124 166.0
BYD1_k127_1204517_4 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase K19200 - - 0.0000000000000000000000000000000000000003347 160.0
BYD1_k127_12082031_0 histidine kinase HAMP region domain protein K03406 - - 1.938e-222 733.0
BYD1_k127_12082031_1 PFAM FAD dependent oxidoreductase K09516 - 1.3.99.23 0.0000000000000000000000000000000000000000000000000000001301 203.0
BYD1_k127_12082031_2 PFAM regulatory protein LysR K02019 - - 0.0000000000000000000000000000000000000000004025 162.0
BYD1_k127_12082031_3 PFAM Formylmethanofuran dehydrogenase, subunit E region K11261 - 1.2.7.12 0.0000000001693 61.0
BYD1_k127_12105758_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1023.0
BYD1_k127_12105758_1 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 293.0
BYD1_k127_12105758_2 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001286 271.0
BYD1_k127_12105758_3 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000738 258.0
BYD1_k127_12105758_4 PFAM UspA - - - 0.0000000000000000000000000000000000000000000000000000000000001636 222.0
BYD1_k127_12105758_5 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000001151 188.0
BYD1_k127_12133439_0 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 542.0
BYD1_k127_12133439_1 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002347 449.0
BYD1_k127_12133439_2 Helix-hairpin-helix motif - - - 0.00000348 53.0
BYD1_k127_12143410_0 PFAM Cytochrome bd ubiquinol oxidase, subunit I K00425 - 1.10.3.14 2.775e-208 655.0
BYD1_k127_12143410_1 Cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003977 431.0
BYD1_k127_12188368_0 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 2.47e-268 837.0
BYD1_k127_12188368_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007902 453.0
BYD1_k127_12188368_10 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.0000000000000000000000000000000000000000000000000000000000000001101 229.0
BYD1_k127_12188368_11 Nucleotidyl transferase - - - 0.000000000000000000000000000000823 138.0
BYD1_k127_12188368_2 -O-antigen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005243 441.0
BYD1_k127_12188368_3 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 411.0
BYD1_k127_12188368_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 325.0
BYD1_k127_12188368_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000585 310.0
BYD1_k127_12188368_6 Glycosyl transferase, WecB TagA CpsF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 314.0
BYD1_k127_12188368_7 COG1091 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 299.0
BYD1_k127_12188368_8 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 303.0
BYD1_k127_12188368_9 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase K00996 - 2.7.8.6 0.000000000000000000000000000000000000000000000000000000000000000000007313 241.0
BYD1_k127_12194930_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05559,K14086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 603.0
BYD1_k127_12194930_1 PFAM NADH-ubiquinone oxidoreductase chain 49kDa K00333,K14090 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 549.0
BYD1_k127_12194930_11 - - - - 0.00000000000000003206 94.0
BYD1_k127_12194930_12 Prokaryotic N-terminal methylation motif - - - 0.0000000000000001578 85.0
BYD1_k127_12194930_13 general secretion pathway protein - - - 0.000000000000001953 83.0
BYD1_k127_12194930_14 - - - - 0.000000002665 61.0
BYD1_k127_12194930_15 type IV pilus modification protein PilV - - - 0.0009765 48.0
BYD1_k127_12194930_2 HI0933-like protein K07007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004531 372.0
BYD1_k127_12194930_3 PFAM respiratory-chain NADH dehydrogenase subunit 1 K14087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004124 359.0
BYD1_k127_12194930_4 Belongs to the complex I 20 kDa subunit family K14088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007713 263.0
BYD1_k127_12194930_5 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000006904 230.0
BYD1_k127_12194930_6 transposase or invertase - - - 0.0000000000000000000000000000000000000000000000000000000000000002588 232.0
BYD1_k127_12194930_7 peroxiredoxin activity - - - 0.0000000000000000000000000000000000007956 143.0
BYD1_k127_12194930_8 PFAM 4Fe-4S ferredoxin iron-sulfur binding K14091 - - 0.0000000000000000000000000000000001367 136.0
BYD1_k127_12194930_9 Respiratory-chain NADH dehydrogenase, 30 Kd subunit K14089 - - 0.0000000000000000000000000000000002972 143.0
BYD1_k127_1250343_0 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005348 499.0
BYD1_k127_1250343_1 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005042 362.0
BYD1_k127_1250343_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000006222 237.0
BYD1_k127_1250343_3 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000000009549 176.0
BYD1_k127_1263376_0 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000007461 102.0
BYD1_k127_1263376_1 PFAM Late competence development protein ComFB - - - 0.000000000000000000002643 96.0
BYD1_k127_1263376_2 - - - - 0.0005965 51.0
BYD1_k127_1319226_0 4Fe-4S dicluster domain K00124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 351.0
BYD1_k127_1319226_1 protein involved in formate dehydrogenase formation K02380 - - 0.00000000000000000000000000000000000007923 153.0
BYD1_k127_1331068_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000591 588.0
BYD1_k127_1331068_1 reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 465.0
BYD1_k127_1331068_2 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000000000000000000004615 207.0
BYD1_k127_1331068_3 Phosphatidylglycerophosphatase A K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000171 160.0
BYD1_k127_1340467_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1010.0
BYD1_k127_1340467_1 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 379.0
BYD1_k127_1340467_2 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 310.0
BYD1_k127_1340467_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005694 311.0
BYD1_k127_1340467_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion K18302 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001007 274.0
BYD1_k127_1340467_5 GTP-binding signal recognition particle SRP54 K02404 - - 0.000000000000000000000000000000000000000000000000000000000001141 223.0
BYD1_k127_1340467_6 Belongs to the ParA family K04562 - - 0.00000000000000000000000005963 108.0
BYD1_k127_1363122_0 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000001402 183.0
BYD1_k127_1363122_1 Domain of unknown function (DUF1844) - - - 0.00000000000000000000000001508 113.0
BYD1_k127_1363122_2 Glycosyl transferase, group 2 family protein - - - 0.000000000000000000000001711 109.0
BYD1_k127_1363122_3 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000001977 109.0
BYD1_k127_1377386_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 3.177e-204 653.0
BYD1_k127_1377386_1 Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2) K11784 - 1.21.98.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 498.0
BYD1_k127_1377386_10 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000000000121 231.0
BYD1_k127_1377386_11 CoA-binding domain protein K06929 - - 0.000000000000000000000000000000000000000000000006241 175.0
BYD1_k127_1377386_12 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000008123 169.0
BYD1_k127_1377386_13 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000001145 173.0
BYD1_k127_1377386_14 PFAM heat shock protein DnaJ domain protein K03686 - - 0.000000000000000000000000000000000000005072 156.0
BYD1_k127_1377386_15 Protein of unknown function (DUF563) - - - 0.0000000000000000000000000000000001228 148.0
BYD1_k127_1377386_16 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.00000000000000000000000000001131 131.0
BYD1_k127_1377386_17 Virulence factor BrkB K07058 - - 0.000000000000000000000000157 116.0
BYD1_k127_1377386_18 Bacterial regulatory protein, Fis family - - - 0.0000000161 61.0
BYD1_k127_1377386_2 Cytochrome c554 and c-prime - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002607 494.0
BYD1_k127_1377386_3 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000803 449.0
BYD1_k127_1377386_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000349 437.0
BYD1_k127_1377386_5 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 GO:0003674,GO:0003824,GO:0006732,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0018130,GO:0019538,GO:0019637,GO:0019720,GO:0043170,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0071704,GO:0090407,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007117 385.0
BYD1_k127_1377386_6 formate dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 322.0
BYD1_k127_1377386_7 Domain of unknown function (DUF814) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007251 272.0
BYD1_k127_1377386_8 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009175 258.0
BYD1_k127_1377386_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000001698 236.0
BYD1_k127_1385968_0 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 8.518e-278 868.0
BYD1_k127_1385968_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 2.571e-245 767.0
BYD1_k127_1385968_2 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005548 369.0
BYD1_k127_1385968_3 PFAM chemotaxis sensory transducer K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005364 304.0
BYD1_k127_1468318_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006346 258.0
BYD1_k127_1468318_1 - - - - 0.000000000002435 74.0
BYD1_k127_1468318_2 OmpA family K03286 - - 0.000000000018 65.0
BYD1_k127_1468318_3 response regulator, receiver K03407,K07678,K14978 GO:0000155,GO:0000160,GO:0000302,GO:0003674,GO:0003824,GO:0004672,GO:0004673,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006979,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009636,GO:0009927,GO:0009987,GO:0010033,GO:0010035,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016775,GO:0018106,GO:0018193,GO:0018202,GO:0019538,GO:0023014,GO:0023052,GO:0035556,GO:0036211,GO:0042221,GO:0042493,GO:0042542,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046677,GO:0046777,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0070887,GO:0071310,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901700 2.7.13.3 0.00001184 51.0
BYD1_k127_1493866_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0 1032.0
BYD1_k127_1493866_1 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 2.741e-198 628.0
BYD1_k127_1493866_2 PFAM binding-protein-dependent transport systems inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009887 403.0
BYD1_k127_1493866_3 PFAM ABC transporter related K02028,K10038 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007801 382.0
BYD1_k127_1493866_4 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 344.0
BYD1_k127_1493866_5 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008517 308.0
BYD1_k127_1493866_6 PFAM Histidine triad (HIT) protein K19710 - 2.7.7.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 282.0
BYD1_k127_1493866_7 O-methyltransferase activity - - - 0.000000000000000000000000000000000000000000003151 176.0
BYD1_k127_1493866_8 - - - - 0.00000000000000000001501 97.0
BYD1_k127_1518906_0 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000009474 211.0
BYD1_k127_1518906_1 Beta-lactamase - - - 0.00001543 51.0
BYD1_k127_1531016_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 3.561e-314 974.0
BYD1_k127_1531016_1 PFAM glycosyl transferase family 9 K02843,K02849 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 394.0
BYD1_k127_1531016_2 PFAM Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004396 347.0
BYD1_k127_1531016_3 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002223 246.0
BYD1_k127_1531016_4 heat shock protein DnaJ domain protein K05516 - - 0.0000000000000000000000000000000000000000000003593 169.0
BYD1_k127_1531016_5 - - - - 0.0000000000000000000000000000000000000000001262 166.0
BYD1_k127_1531016_6 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000006603 124.0
BYD1_k127_1531016_7 PFAM Stage II sporulation E family protein K01079,K07315 - 3.1.3.3 0.00000000000000000000002146 104.0
BYD1_k127_1531016_8 PFAM transport-associated K04065 - - 0.0000000000000000000006689 102.0
BYD1_k127_1531016_9 PFAM import inner membrane translocase subunit Tim44 - - - 0.0000000000000007958 86.0
BYD1_k127_1571585_0 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003172 281.0
BYD1_k127_1571585_1 CRISPR-associated endoribonuclease Cas6 - - - 0.00000000000000000000000000000000000000000000000000000000001555 216.0
BYD1_k127_1571585_2 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000001491 158.0
BYD1_k127_1571585_3 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000003848 135.0
BYD1_k127_1572694_0 PFAM Cytochrome c assembly protein K02198 - - 1.121e-215 687.0
BYD1_k127_1572694_1 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 1.051e-207 654.0
BYD1_k127_1572694_10 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000000000000000000000000000000000003622 192.0
BYD1_k127_1572694_11 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.0000000000000000000000000000000000000000000000000985 180.0
BYD1_k127_1572694_12 Arsenical resistance operon trans-acting repressor ArsD - - - 0.000000000000000005895 87.0
BYD1_k127_1572694_13 - - - - 0.000000009164 60.0
BYD1_k127_1572694_2 Belongs to the RNA methyltransferase TrmD family K00554 GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002341 526.0
BYD1_k127_1572694_3 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008642 430.0
BYD1_k127_1572694_4 CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 398.0
BYD1_k127_1572694_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009319 427.0
BYD1_k127_1572694_6 PFAM secretion protein HlyD K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003246 295.0
BYD1_k127_1572694_7 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005713 252.0
BYD1_k127_1572694_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000000001319 233.0
BYD1_k127_1572694_9 PFAM Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000005041 220.0
BYD1_k127_1593239_0 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 GO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 345.0
BYD1_k127_1593239_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 343.0
BYD1_k127_1593239_2 Belongs to the TrpC family K01609,K13498 GO:0003674,GO:0003824,GO:0004425,GO:0016829,GO:0016830,GO:0016831 4.1.1.48,5.3.1.24 0.0000000000000000000000000000009768 128.0
BYD1_k127_1614199_0 Abc transporter K01990,K11050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 317.0
BYD1_k127_1614199_1 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000003482 240.0
BYD1_k127_1614199_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000002123 215.0
BYD1_k127_1700146_0 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 339.0
BYD1_k127_1700146_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000003506 225.0
BYD1_k127_1700146_2 reductase, beta subunit K00395 - 1.8.99.2 0.0000000000000000000000000000000000004314 139.0
BYD1_k127_1700146_3 PFAM Type IV pilus assembly PilZ - - - 0.00000000000000000000000000009869 125.0
BYD1_k127_1806907_0 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 1.443e-234 741.0
BYD1_k127_1806907_1 Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs K04094 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 2.1.1.74 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005904 553.0
BYD1_k127_1806907_10 - - - - 0.00000000000000000000000009633 115.0
BYD1_k127_1806907_11 Protein of unknown function (DUF805) - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000002324 87.0
BYD1_k127_1806907_2 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 515.0
BYD1_k127_1806907_3 Belongs to the helicase family. UvrD subfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005774 417.0
BYD1_k127_1806907_4 PFAM Cyclic nucleotide-binding K01420,K21563 - - 0.000000000000000000000000000000000000000000000000000000000002939 215.0
BYD1_k127_1806907_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000002922 189.0
BYD1_k127_1806907_6 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000000000000000000000000001921 187.0
BYD1_k127_1806907_7 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000005427 172.0
BYD1_k127_1806907_8 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000001586 173.0
BYD1_k127_1806907_9 Pfam:DUF2276 - - - 0.00000000000000000000000000000000000002051 156.0
BYD1_k127_1816382_0 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 568.0
BYD1_k127_1816382_1 PFAM NAD-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007463 349.0
BYD1_k127_1824097_0 CHAT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007881 385.0
BYD1_k127_1824097_1 Iron-sulfur cluster-binding domain - - - 0.00000000000000000000000000000006815 139.0
BYD1_k127_190058_0 von Willebrand factor type A domain - - - 0.00000000000000000000000000000000000000001927 163.0
BYD1_k127_190058_1 OmpA family - - - 0.000000000000000000000000000000001047 140.0
BYD1_k127_190058_2 - - - - 0.000000000000000000000005645 112.0
BYD1_k127_190058_3 CBS domain containing protein K06189 - - 0.00000000000000000001332 94.0
BYD1_k127_190058_4 HdeA/HdeB family - - - 0.0000000005121 64.0
BYD1_k127_190058_5 DnaJ molecular chaperone homology domain - - - 0.0002615 53.0
BYD1_k127_1935322_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 GO:0000166,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008144,GO:0008150,GO:0008320,GO:0008565,GO:0015031,GO:0015399,GO:0015405,GO:0015440,GO:0015450,GO:0015462,GO:0015833,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0022804,GO:0022857,GO:0022884,GO:0030554,GO:0031224,GO:0031226,GO:0031522,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033036,GO:0033220,GO:0035639,GO:0036094,GO:0042623,GO:0042626,GO:0042886,GO:0042887,GO:0043167,GO:0043168,GO:0043492,GO:0043952,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1904680 - 0.0 1208.0
BYD1_k127_1935322_1 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.906e-242 767.0
BYD1_k127_1935322_2 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005515 509.0
BYD1_k127_1935322_3 Metal-dependent hydrolase HDOD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 354.0
BYD1_k127_1935322_4 Involved in DNA repair and RecF pathway recombination K03584 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008292 256.0
BYD1_k127_1935322_5 peptidylprolyl isomerase K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000002529 238.0
BYD1_k127_1935322_6 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation - - - 0.000000000000000000000000000000000000000000000000000000000000002472 229.0
BYD1_k127_1935322_7 double-stranded DNA endodeoxyribonuclease activity - - - 0.0000000000000000000000000000000000000000000000000592 188.0
BYD1_k127_1935322_8 SMART helix-turn-helix domain protein K15539 - - 0.000000000000000000000000000000002776 141.0
BYD1_k127_2001963_0 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 367.0
BYD1_k127_2001963_1 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001125 265.0
BYD1_k127_2001963_2 response regulator, receiver K03413 - - 0.0000000000000000000000000000000000000001098 154.0
BYD1_k127_2001963_3 cheY-homologous receiver domain - - - 0.00000000000000000000000000118 116.0
BYD1_k127_2001963_4 MerR HTH family regulatory protein - - - 0.000000000000000001069 97.0
BYD1_k127_2031918_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 8.697e-314 971.0
BYD1_k127_2031918_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.189e-293 914.0
BYD1_k127_2031918_2 Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate K10206 - 2.6.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004756 579.0
BYD1_k127_2031918_3 Carbonic anhydrase K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000001895 266.0
BYD1_k127_2031918_4 transposase or invertase - - - 0.0000000000000000000000000000000000000007075 154.0
BYD1_k127_2031918_5 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.000000000000000000000473 96.0
BYD1_k127_2031918_6 FAD linked oxidase domain protein - - - 0.0000000000000000005184 88.0
BYD1_k127_2031918_7 Resolvase, N terminal domain - - - 0.000000003929 57.0
BYD1_k127_2052848_0 reductase, dissimilatory-type alpha subunit K11180 - 1.8.99.5 4.351e-253 784.0
BYD1_k127_2052848_1 TIGRFAM sulfite reductase, dissimilatory-type beta subunit K11181 - 1.8.99.5 1.027e-207 651.0
BYD1_k127_2052848_10 PFAM Dissimilatory sulfite reductase D - - - 0.000000000000000001698 87.0
BYD1_k127_2052848_11 EamA-like transporter family - - - 0.00000000001106 66.0
BYD1_k127_2052848_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 566.0
BYD1_k127_2052848_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008796 465.0
BYD1_k127_2052848_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003245 427.0
BYD1_k127_2052848_5 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 428.0
BYD1_k127_2052848_6 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003,K05685 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001381 282.0
BYD1_k127_2052848_7 Domain of unknown function (DUF362) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007885 285.0
BYD1_k127_2052848_8 transposase, YhgA-like - - - 0.00000000000000000000000000000000000000000000000000000000000001425 227.0
BYD1_k127_2098501_0 Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 4.539e-203 658.0
BYD1_k127_2098501_1 Pfam:DUF342 K09749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006512 407.0
BYD1_k127_2098501_2 O-methyltransferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 315.0
BYD1_k127_2098501_3 hydrogen uptake protein K03605 - - 0.000000000000000000000000000000000000000000000000000000000000000002701 229.0
BYD1_k127_2098501_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000002915 193.0
BYD1_k127_2098501_5 Universal stress protein - - - 0.0000000000000000000409 95.0
BYD1_k127_2098501_6 transferase activity, transferring glycosyl groups - - - 0.00000002439 67.0
BYD1_k127_2098501_7 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000001812 54.0
BYD1_k127_2183406_0 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic K00015 - 1.1.1.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000766 462.0
BYD1_k127_2183406_1 PFAM Glycosyl transferase family 2 K07011,K20444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 339.0
BYD1_k127_2183406_2 Diguanylate cyclase K21084 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000192 216.0
BYD1_k127_2183406_3 Putative transposase of IS4/5 family (DUF4096) - - - 0.000000000002534 68.0
BYD1_k127_2197086_0 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 466.0
BYD1_k127_2197086_1 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000571 441.0
BYD1_k127_2197086_2 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 332.0
BYD1_k127_2197086_3 Belongs to the bacterial histone-like protein family K05788 - - 0.000000000000000000000000000000007541 133.0
BYD1_k127_2197086_4 TIGRFAM Diguanylate cyclase K13069 - 2.7.7.65 0.00000000000000000000006724 109.0
BYD1_k127_2197086_5 Belongs to the 5'-nucleotidase family - - - 0.00000000000000006636 87.0
BYD1_k127_2248785_0 PFAM ABC transporter K11004 - - 5.534e-201 641.0
BYD1_k127_2248785_1 Formyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000001256 222.0
BYD1_k127_2270492_0 Transcriptional regulatory protein, C terminal K07662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 299.0
BYD1_k127_2270492_1 PFAM ATP-binding region ATPase domain protein K02484,K07640 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000008405 314.0
BYD1_k127_2270492_2 Histidine kinase K11383 - 2.7.13.3 0.0000000000000000000000000000000000000000000003212 171.0
BYD1_k127_2270492_3 - - - - 0.00000000000000000000000000000000000000001805 164.0
BYD1_k127_2312749_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 504.0
BYD1_k127_2312749_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006047 297.0
BYD1_k127_2312749_2 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004085 248.0
BYD1_k127_2312749_3 sigma factor antagonist activity - - - 0.000000000000000000000000000000000000000000000000000000000000002002 234.0
BYD1_k127_2331132_0 Histidine Phosphotransfer domain - - - 0.0000000000000000000000000000000000000000000000000000000009166 223.0
BYD1_k127_2331132_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995 - 2.7.8.5 0.0000000000000000000000000000000000000000000000000000004136 199.0
BYD1_k127_2331132_2 PBP superfamily domain K02040 - - 0.000000000000000000000001299 108.0
BYD1_k127_2331132_3 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000001377 103.0
BYD1_k127_23456_0 Histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001728 449.0
BYD1_k127_2393974_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004992 486.0
BYD1_k127_2393974_1 Catalyzes the insertion of Co(2 ) into sirohydrochlorin K02190 GO:0003674,GO:0003824,GO:0004325,GO:0005488,GO:0005575,GO:0005623,GO:0008150,GO:0009987,GO:0016043,GO:0016829,GO:0016852,GO:0020037,GO:0022607,GO:0042597,GO:0043167,GO:0043169,GO:0043933,GO:0044085,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0048037,GO:0050897,GO:0051259,GO:0051262,GO:0051266,GO:0065003,GO:0071840,GO:0097159,GO:1901363 4.99.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001911 287.0
BYD1_k127_2393974_2 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000004729 226.0
BYD1_k127_2436322_0 Gtr1/RagA G protein conserved region K06883 GO:0008150,GO:0032879,GO:0032880,GO:0050789,GO:0065007 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 292.0
BYD1_k127_2436322_2 - K08086 - - 0.0000000000001366 83.0
BYD1_k127_2436322_3 TIGRFAM MJ0042 family finger-like protein - - - 0.000006076 56.0
BYD1_k127_2442663_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 419.0
BYD1_k127_2451033_0 Beta-Casp domain K07576 - - 4.768e-233 733.0
BYD1_k127_2451033_1 PFAM Succinylglutamate desuccinylase Aspartoacylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 458.0
BYD1_k127_2451033_10 PFAM Xylose isomerase domain protein TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000000002049 225.0
BYD1_k127_2451033_11 PFAM Precorrin-8X methylmutase CbiC CobH K06042 - 5.4.99.60,5.4.99.61 0.00000000000000000000000000000000000000000000000000000000000003897 222.0
BYD1_k127_2451033_12 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000001731 207.0
BYD1_k127_2451033_13 5'-deoxynucleotidase activity K06952 - - 0.0000000000000000000000000000000000000000155 161.0
BYD1_k127_2451033_14 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000001998 158.0
BYD1_k127_2451033_15 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.00000000000000000000000000000000004237 140.0
BYD1_k127_2451033_16 Bacterial SH3 domain homologues - - - 0.000000000000000000000000000005966 124.0
BYD1_k127_2451033_17 TPR repeat - - - 0.000000000001109 79.0
BYD1_k127_2451033_18 - - - - 0.00001977 57.0
BYD1_k127_2451033_2 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 444.0
BYD1_k127_2451033_3 PFAM phosphoesterase RecJ domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 412.0
BYD1_k127_2451033_4 serine threonine protein kinase K08282 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 388.0
BYD1_k127_2451033_5 Histidine kinase A domain protein K07678 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 386.0
BYD1_k127_2451033_6 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 356.0
BYD1_k127_2451033_7 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000563 344.0
BYD1_k127_2451033_8 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000852 336.0
BYD1_k127_2451033_9 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002748 286.0
BYD1_k127_2555437_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 1.659e-201 634.0
BYD1_k127_2555437_1 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 407.0
BYD1_k127_2555437_2 Protein of unknown function (DUF4239) - - - 0.000000000000000000000000000000005084 134.0
BYD1_k127_2571931_0 PFAM Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003135 495.0
BYD1_k127_2571931_1 Rhodanese-like domain - - - 0.00000000000000000000000000000000000002287 148.0
BYD1_k127_2571931_2 PFAM regulatory protein ArsR K22043 - - 0.00000000000000000000000000000003709 128.0
BYD1_k127_2571931_3 - - - - 0.000000000000000000000000002211 113.0
BYD1_k127_2571931_4 - - - - 0.00000000003329 65.0
BYD1_k127_2581879_0 ATP-dependent Clp protease ATP-binding subunit ClpA K03694 - - 5.901e-288 904.0
BYD1_k127_2581879_1 PFAM chemotaxis sensory transducer K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 351.0
BYD1_k127_2581879_2 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000007915 141.0
BYD1_k127_2581879_3 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.000000000001807 68.0
BYD1_k127_2630849_0 S-(hydroxymethyl)glutathione dehydrogenase activity K00001,K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 457.0
BYD1_k127_2630849_1 Transketolase, pyrimidine binding domain K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003136 403.0
BYD1_k127_2630849_10 Radical SAM - - - 0.000000000213 72.0
BYD1_k127_2630849_2 COG3959 Transketolase, N-terminal subunit K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 357.0
BYD1_k127_2630849_3 methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001591 271.0
BYD1_k127_2630849_4 Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000000000000000005041 200.0
BYD1_k127_2630849_5 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000001493 208.0
BYD1_k127_2630849_6 Aminoglycoside phosphotransferase - - - 0.000000000000000000000000000005742 128.0
BYD1_k127_2630849_7 Methyltransferase domain - - - 0.00000000000000000000000000006526 124.0
BYD1_k127_2630849_8 Tetratricopeptide repeat - - - 0.00000000000000000000000002676 124.0
BYD1_k127_2630849_9 3-demethylubiquinone-9 3-O-methyltransferase activity K15257 - - 0.0000000000000000002038 100.0
BYD1_k127_2641833_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 577.0
BYD1_k127_2641833_1 PFAM Band 7 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004253 444.0
BYD1_k127_2641833_2 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000131 167.0
BYD1_k127_2641833_3 response regulator, receiver - - - 0.0000000000000000000000000000000003979 145.0
BYD1_k127_2641833_4 cellular response to DNA damage stimulus K07340 - - 0.000000000000000000002928 98.0
BYD1_k127_2641833_5 - - - - 0.0000000000000002032 90.0
BYD1_k127_2647491_0 PFAM Cytochrome c, class I - - - 2.636e-260 828.0
BYD1_k127_2739787_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007768 441.0
BYD1_k127_2739787_1 Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl- D-erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2- phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4- cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF) K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005956 420.0
BYD1_k127_2739787_12 Caspase domain - - - 0.0001677 48.0
BYD1_k127_2739787_2 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 321.0
BYD1_k127_2739787_3 C4-type zinc ribbon domain K07164 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009593 261.0
BYD1_k127_2739787_4 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007357 249.0
BYD1_k127_2739787_5 type VI secretion protein K11900 - - 0.000000000000000000000000000000000000000000000000000000000000000000793 247.0
BYD1_k127_2739787_6 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000007937 209.0
BYD1_k127_2739787_7 transcription activator, effector binding K13652 - - 0.00000000000000000000000000000000000000000000000004759 182.0
BYD1_k127_2739787_9 Caspase domain - - - 0.0000007023 60.0
BYD1_k127_2766336_0 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004598 256.0
BYD1_k127_2766336_1 Domain of unknown function (DUF4150) - - - 0.000000000000000000000000000000000000000000000000000006336 194.0
BYD1_k127_2766336_2 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000003528 190.0
BYD1_k127_2766336_3 Protein of unknown function (DUF3540) - - - 0.0000000000000000000000000000000000000007303 157.0
BYD1_k127_2766336_4 Putative diguanylate phosphodiesterase - - - 0.000000000000000004928 85.0
BYD1_k127_2766336_5 - - - - 0.00000000000002013 76.0
BYD1_k127_2788161_0 PFAM aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 588.0
BYD1_k127_2788161_1 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 338.0
BYD1_k127_2788161_2 hydrogenase maturation protease K00442 - - 0.000000000000000000000000000000000000000000000000000000000003564 213.0
BYD1_k127_2788161_4 - - - - 0.000000313 55.0
BYD1_k127_2789931_0 Histidine kinase K11527 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 652.0
BYD1_k127_2789931_1 Protein of unknown function, DUF255 K06888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002247 516.0
BYD1_k127_2789931_2 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007949 451.0
BYD1_k127_2805203_0 PFAM Radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 343.0
BYD1_k127_2805203_1 Pfam SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 295.0
BYD1_k127_2805203_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001034 188.0
BYD1_k127_2805203_3 PFAM Cytochrome C biogenesis protein transmembrane region K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000005309 168.0
BYD1_k127_2805203_4 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K01607 - 4.1.1.44 0.000000000000000000000000000000000000000000008311 164.0
BYD1_k127_2805203_5 TIGRFAM C_GCAxxG_C_C family protein - - - 0.00000000000000000000000000000000000005061 148.0
BYD1_k127_2805203_6 - - - - 0.0000000000000000000000000003004 115.0
BYD1_k127_2809823_0 PFAM Cytochrome c assembly protein K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005754 281.0
BYD1_k127_2809823_1 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000833 134.0
BYD1_k127_2809823_2 Nitroreductase family - - - 0.000000000007981 68.0
BYD1_k127_2844482_0 Cache_2 K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 474.0
BYD1_k127_2844482_1 Alanine racemase, N-terminal domain - - - 0.00000000000000000000000000000000000000000000000002673 187.0
BYD1_k127_2882336_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 1.487e-293 908.0
BYD1_k127_2882336_1 PFAM ATP-binding region ATPase domain protein - - - 2.315e-245 814.0
BYD1_k127_2882336_2 PFAM Sodium calcium exchanger membrane region K07301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007733 491.0
BYD1_k127_2882336_3 PFAM ATP phosphoribosyltransferase, catalytic region K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009835 451.0
BYD1_k127_2882336_4 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K00254,K02823,K17828 GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019856,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046390,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 414.0
BYD1_k127_2882336_5 PFAM GGDEF domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 362.0
BYD1_k127_2882336_6 signal peptide peptidase SppA, 36K type K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003229 271.0
BYD1_k127_2882336_7 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.000000000000000000000000000000000000000000000000000000004385 201.0
BYD1_k127_2882336_8 AsmA family K07289 - - 0.000000000001939 76.0
BYD1_k127_2896943_0 - - - - 0.000000000000000000000000000002777 124.0
BYD1_k127_2896943_1 - - - - 0.000000000000000000000000007175 123.0
BYD1_k127_2896943_2 - - - - 0.00000000000003265 76.0
BYD1_k127_2896943_3 - - - - 0.000000001651 66.0
BYD1_k127_2896943_4 - - - - 0.0000005464 55.0
BYD1_k127_2918427_0 4Fe-4S binding domain - - - 7.209e-229 731.0
BYD1_k127_2918427_1 Belongs to the HypD family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007707 513.0
BYD1_k127_2918427_10 - - - - 0.00000000000000000000000000000000000007517 153.0
BYD1_k127_2918427_11 - - - - 0.00000000000000000000000000000125 128.0
BYD1_k127_2918427_12 - - - - 0.000000000000000000000005213 107.0
BYD1_k127_2918427_13 Protein of unknown function (DUF1015) - - - 0.0000000000000000004564 90.0
BYD1_k127_2918427_14 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000000009161 96.0
BYD1_k127_2918427_15 Protein of unknown function (DUF563) - - - 0.00000000000000007733 93.0
BYD1_k127_2918427_16 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000001158 77.0
BYD1_k127_2918427_17 PFAM Radical SAM - - - 0.00000000000008958 84.0
BYD1_k127_2918427_2 TIGRFAM hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006377 492.0
BYD1_k127_2918427_3 Aldo/keto reductase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 493.0
BYD1_k127_2918427_4 Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3- (1- carboxyvinyl)oxy benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate K11779,K11784,K18285 - 1.21.98.1,2.5.1.120,2.5.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001296 469.0
BYD1_k127_2918427_5 Ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 419.0
BYD1_k127_2918427_6 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002318 398.0
BYD1_k127_2918427_7 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000554 404.0
BYD1_k127_2918427_8 PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K05936 - 2.1.1.133,2.1.1.271 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004854 271.0
BYD1_k127_2918427_9 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003041 261.0
BYD1_k127_3013029_0 PFAM type II secretion system K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002234 520.0
BYD1_k127_3013029_1 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000591 298.0
BYD1_k127_3013029_2 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000004076 154.0
BYD1_k127_3108825_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001413 555.0
BYD1_k127_3108825_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 526.0
BYD1_k127_3124404_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 4.226e-214 670.0
BYD1_k127_3124404_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007837 416.0
BYD1_k127_3124404_2 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000001831 196.0
BYD1_k127_3124404_3 - - - - 0.00000000000000000000000000000000000000000006762 173.0
BYD1_k127_3134656_0 7TM diverse intracellular signalling K20971 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007795 372.0
BYD1_k127_3134656_1 Glycosyl transferase 4-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002385 280.0
BYD1_k127_3134656_2 PFAM phosphate transporter K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006846 269.0
BYD1_k127_3134656_3 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006699 278.0
BYD1_k127_3134656_4 Phosphate transport regulator K07220 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001153 248.0
BYD1_k127_3134656_5 Transcriptional regulator, Crp Fnr family K03321,K10914 - - 0.00000000000000000000000000000000000000000000000000004195 202.0
BYD1_k127_3173076_0 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 444.0
BYD1_k127_3173076_1 CheY-like receiver, AAA-type ATPase and DNA-binding domain-containing response regulator - - - 0.000000000000000000000000000000000000000000188 172.0
BYD1_k127_3173076_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.000000000000000000000000004761 115.0
BYD1_k127_3173076_3 - - - - 0.000000000000000000000001627 117.0
BYD1_k127_3173076_4 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K05337 - - 0.0000003626 54.0
BYD1_k127_3178390_0 Signal transducing histidine kinase, homodimeric K02487,K06596 - - 1.292e-208 691.0
BYD1_k127_3178390_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001328 431.0
BYD1_k127_3178390_2 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 401.0
BYD1_k127_3178390_3 Chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007287 327.0
BYD1_k127_3178390_4 Chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 312.0
BYD1_k127_3178390_5 Belongs to the RtcB family K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000002766 239.0
BYD1_k127_3178390_6 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.000000000000000000000000000000000000000000000000000003161 205.0
BYD1_k127_3178390_7 Two component signalling adaptor domain - - - 0.00000000000000000000000000009757 121.0
BYD1_k127_3178390_8 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000001735 113.0
BYD1_k127_3180060_0 similarity to GP 21899254 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003195 337.0
BYD1_k127_3180060_1 Major Facilitator Superfamily K02445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 325.0
BYD1_k127_3180060_2 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000001549 216.0
BYD1_k127_3180060_3 Pathogenicity locus - - - 0.000000000000000000000000000000003206 130.0
BYD1_k127_3183753_0 Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 1.114e-272 864.0
BYD1_k127_3183753_1 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009669 362.0
BYD1_k127_3183753_2 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000007134 230.0
BYD1_k127_3213234_0 PFAM Type II secretion system protein E K02454,K02652 - - 1.394e-210 670.0
BYD1_k127_3213234_1 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 1.777e-196 625.0
BYD1_k127_3213234_2 Belongs to the DEAD box helicase family K05592 - 3.6.4.13 1.82e-196 625.0
BYD1_k127_3213234_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 526.0
BYD1_k127_3213234_4 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000036 463.0
BYD1_k127_3213234_5 PFAM GAF domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001656 236.0
BYD1_k127_3269231_0 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 2.76e-217 679.0
BYD1_k127_3269231_1 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007203 539.0
BYD1_k127_3269231_2 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000006685 264.0
BYD1_k127_3269231_3 Cell division protein FtsQ K03589 - - 0.0000000000000000000000000000000000000000000000006402 185.0
BYD1_k127_3269231_4 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000006474 122.0
BYD1_k127_3269231_5 - - - - 0.0000000000000000008849 89.0
BYD1_k127_329201_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 4.413e-248 784.0
BYD1_k127_329201_1 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K00058,K01754,K04767 - 1.1.1.399,1.1.1.95,4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004306 532.0
BYD1_k127_329201_2 - - - - 0.000000000000000000000000000000000002357 141.0
BYD1_k127_329201_3 transcriptional regulator - - - 0.000186 48.0
BYD1_k127_3336989_0 PFAM Metal-dependent hydrolase HDOD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008508 310.0
BYD1_k127_3336989_1 MoeA domain protein domain I and II K03750,K07219 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000249 280.0
BYD1_k127_3336989_2 SMART ATP-binding region ATPase domain protein - - - 0.0000000000000000000004159 104.0
BYD1_k127_3345523_0 NlpC P60 family - - - 0.000000000000000000000000002399 121.0
BYD1_k127_3473052_0 PFAM CBS domain containing protein K04767 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002078 309.0
BYD1_k127_3473052_1 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000004547 222.0
BYD1_k127_3473052_2 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.000000000000148 73.0
BYD1_k127_347719_0 PFAM AIR synthase related protein K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 514.0
BYD1_k127_347719_1 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003417 432.0
BYD1_k127_347719_2 beta-lactamase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006224 269.0
BYD1_k127_347719_3 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000008088 182.0
BYD1_k127_347719_4 PFAM Peptidase M22, glycoprotease - - - 0.00000000000000000000000000000000000000000005811 174.0
BYD1_k127_347719_5 PFAM Class II Aldolase K01628 - 4.1.2.17 0.00000000000000000000000000000000000003635 145.0
BYD1_k127_3494679_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 406.0
BYD1_k127_3494679_1 DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity K03581 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000429 301.0
BYD1_k127_3494679_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005952 301.0
BYD1_k127_3526034_0 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008773 557.0
BYD1_k127_3526034_1 Phage late control gene D protein (GPD) K11904 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 557.0
BYD1_k127_3526034_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 342.0
BYD1_k127_3526034_3 PFAM Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K05934,K13541,K21479 - 2.1.1.131,2.1.1.272,3.7.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000004219 266.0
BYD1_k127_3526034_4 Domain of unknown function (DUF4150) - - - 0.0000000000000000000000000000000000002684 144.0
BYD1_k127_3526034_5 Pentapeptide repeat protein - - - 0.00000000000000001856 94.0
BYD1_k127_3526034_6 COG0457 FOG TPR repeat - - - 0.0001301 52.0
BYD1_k127_3547273_0 Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.0 1756.0
BYD1_k127_3547273_1 DUF based on E. rectale Gene description (DUF3880) K06320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000157 626.0
BYD1_k127_3547273_10 PFAM response regulator receiver - - - 0.00000000000000000000000000000001074 133.0
BYD1_k127_3547273_11 transporter antisigma-factor antagonist STAS K04749 - - 0.0000000000000000000000001319 109.0
BYD1_k127_3547273_12 anti-sigma regulatory factor, serine threonine protein kinase K04757 - 2.7.11.1 0.0000000000000000000008259 100.0
BYD1_k127_3547273_13 PFAM CutA1 divalent ion tolerance protein K03926 - - 0.0000000000000000006473 88.0
BYD1_k127_3547273_14 Heavy-metal resistance K07803 - - 0.000000000000000007756 91.0
BYD1_k127_3547273_2 PFAM Adenylate cyclase, class-I K05851 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 557.0
BYD1_k127_3547273_3 aminotransferase class I and II K05825 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002634 470.0
BYD1_k127_3547273_4 Beta-eliminating lyase K13017 - 2.6.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 464.0
BYD1_k127_3547273_5 PBP superfamily domain K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 376.0
BYD1_k127_3547273_6 protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001776 307.0
BYD1_k127_3547273_7 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - 0.0000000000000000000000000000000000000000000000007483 178.0
BYD1_k127_3547273_8 PFAM Uncharacterised protein family UPF0047 - - - 0.000000000000000000000000000000000000000000001235 170.0
BYD1_k127_3547273_9 PFAM 6-pyruvoyl tetrahydropterin synthase and K01737 - 4.1.2.50,4.2.3.12 0.0000000000000000000000000000000001175 137.0
BYD1_k127_3561739_0 PFAM chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 386.0
BYD1_k127_3561739_1 Acid phosphatase homologues K19302 - 3.6.1.27 0.000000000000000000000000000000008187 135.0
BYD1_k127_3568834_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002304 328.0
BYD1_k127_3568834_1 Putative member of DMT superfamily (DUF486) K09922 - - 0.00000000000000000000000000000000000000000000000000000164 194.0
BYD1_k127_3568834_2 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000122 69.0
BYD1_k127_3572782_0 Cupin 2 conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002869 263.0
BYD1_k127_3572782_1 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.000000000000000000000000000000000002144 144.0
BYD1_k127_3572782_2 SMART TRASH domain protein - - - 0.0000000000000000000000000006376 115.0
BYD1_k127_3572782_3 Belongs to the flagella basal body rod proteins family K02388 - - 0.0001951 44.0
BYD1_k127_3599342_0 NLP P60 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009149 471.0
BYD1_k127_3599342_1 Cell wall-associated hydrolase (invasion-associated protein) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007822 252.0
BYD1_k127_3673914_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.625e-239 743.0
BYD1_k127_3673914_1 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005074 473.0
BYD1_k127_3673914_2 PFAM Transcription factor CarD K07736 - - 0.0000000000000000000000000000000000000000000000000000000000000000002184 233.0
BYD1_k127_3673914_3 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000009281 204.0
BYD1_k127_3673914_4 SNARE associated Golgi protein - - - 0.0000000000000000000000000000000000000000000000000009718 189.0
BYD1_k127_3673914_5 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 GO:0003674,GO:0003824,GO:0004045,GO:0016787,GO:0016788,GO:0052689,GO:0140098,GO:0140101 3.1.1.29 0.0000000000000000000000000000000000000000000000002049 184.0
BYD1_k127_3683152_0 acetyl-CoA hydrolase transferase K18288 - - 3.193e-204 643.0
BYD1_k127_3683152_1 Fructose-1,6-bisphosphate aldolase, class II K01624 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 453.0
BYD1_k127_3683152_2 WLM domain K07043 - - 0.000000000000000000000000000000000000000000000000000002103 199.0
BYD1_k127_3683152_3 Protein of unknown function (DUF554) K07150 - - 0.000000003015 58.0
BYD1_k127_3700796_0 Iron-containing alcohol dehydrogenase K00005 - 1.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007709 571.0
BYD1_k127_3700796_1 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005455 539.0
BYD1_k127_3700796_2 PFAM Isocitrate lyase family K03417,K20454 - 4.1.3.30,4.1.3.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 332.0
BYD1_k127_3700796_3 PFAM EamA-like transporter family K03298 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 292.0
BYD1_k127_371029_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002095 488.0
BYD1_k127_371029_1 signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 398.0
BYD1_k127_371029_2 PFAM Pyruvoyl-dependent arginine decarboxylase K02626 - 4.1.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 313.0
BYD1_k127_371029_3 Cupin superfamily (DUF985) K09705 - - 0.0000000000000000000000000000000000000000000000000000000000000005933 224.0
BYD1_k127_371029_4 Putative zinc- or iron-chelating domain - - - 0.000000000000000000000000000000000000002944 154.0
BYD1_k127_371029_5 - - - - 0.00000000000000000000000000000000001049 139.0
BYD1_k127_371029_6 PFAM Sporulation - - - 0.00000000000000000000005808 111.0
BYD1_k127_371029_7 - - - - 0.00000007105 62.0
BYD1_k127_3711913_0 BadF BadG BcrA BcrD - - - 0.0 1504.0
BYD1_k127_3711913_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 8.807e-291 899.0
BYD1_k127_3711913_10 PFAM 2-nitropropane dioxygenase NPD K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000001334 220.0
BYD1_k127_3711913_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000001518 154.0
BYD1_k127_3711913_12 - - - - 0.00000000000000000000002607 102.0
BYD1_k127_3711913_13 elongation factor Tu domain 2 protein K02355,K18220 - - 0.0000000000000005485 78.0
BYD1_k127_3711913_2 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007622 550.0
BYD1_k127_3711913_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007902 486.0
BYD1_k127_3711913_4 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007265 499.0
BYD1_k127_3711913_5 Calcineurin-like phosphoesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 383.0
BYD1_k127_3711913_6 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 346.0
BYD1_k127_3711913_7 SMART phosphoesterase PHP domain protein K07053 - 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 321.0
BYD1_k127_3711913_8 AAA domain K03546 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 305.0
BYD1_k127_3711913_9 PFAM NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004266 276.0
BYD1_k127_3712585_0 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000182 543.0
BYD1_k127_3712585_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008414 268.0
BYD1_k127_3712585_2 cog1234, metal-dependent hydrolases of the beta-lactamase superfamily III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004109 254.0
BYD1_k127_3712585_3 S-layer homology domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009617 266.0
BYD1_k127_3712585_4 PFAM Hemolysin-type calcium-binding repeat (2 copies) K01183 - 3.2.1.14 0.000000000000000001262 99.0
BYD1_k127_3712585_5 Zeta toxin - - - 0.000000000000000006496 89.0
BYD1_k127_3712585_6 - - - - 0.00000000000000002839 82.0
BYD1_k127_3712585_7 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain K02030 - - 0.000000002373 67.0
BYD1_k127_3713901_0 Glycosyl transferase family 41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 316.0
BYD1_k127_3713901_1 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001352 314.0
BYD1_k127_3720107_0 Pyruvate phosphate dikinase PEP K01007 - 2.7.9.2 5.847e-303 952.0
BYD1_k127_3720107_1 membrane transporter protein K07090 - - 1.677e-207 652.0
BYD1_k127_3720107_2 Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 588.0
BYD1_k127_3720107_3 protein N-acetylglucosaminyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001687 392.0
BYD1_k127_3720107_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000008242 246.0
BYD1_k127_3720107_5 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000002524 173.0
BYD1_k127_3720107_6 PFAM response regulator receiver - - - 0.0000000000000007758 83.0
BYD1_k127_3734791_0 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 - 1.7.2.2 7.868e-233 734.0
BYD1_k127_3734791_1 CBS domain containing protein K03281 - - 3.287e-214 684.0
BYD1_k127_3734791_10 Pfam Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000007388 198.0
BYD1_k127_3734791_11 Cytochrome c-type protein K15876 - - 0.00000000000000000000000000000001044 129.0
BYD1_k127_3734791_12 Bacterial OB fold (BOF) protein - - - 0.000000000000000000000005111 106.0
BYD1_k127_3734791_13 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000005813 99.0
BYD1_k127_3734791_14 Beta-lactamase - - - 0.0000004033 59.0
BYD1_k127_3734791_15 Cytochrome c-type protein K15876 - - 0.000003043 49.0
BYD1_k127_3734791_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001866 546.0
BYD1_k127_3734791_3 Belongs to the acetokinase family K00929 - 2.7.2.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003018 379.0
BYD1_k127_3734791_4 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004209 310.0
BYD1_k127_3734791_5 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006039 270.0
BYD1_k127_3734791_6 Abc transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001062 248.0
BYD1_k127_3734791_7 phosphate butyryltransferase K00634 GO:0003674,GO:0003824,GO:0016740,GO:0016746,GO:0016747,GO:0050182 2.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000002528 237.0
BYD1_k127_3734791_8 Acetolactate synthase, small subunit K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000048 217.0
BYD1_k127_3734791_9 - - - - 0.0000000000000000000000000000000000000000000000000000002828 199.0
BYD1_k127_3743085_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.107e-206 647.0
BYD1_k127_3743085_1 overlaps another CDS with the same product name K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 327.0
BYD1_k127_3743085_2 PFAM Methyltransferase type 11 K03892 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001434 279.0
BYD1_k127_3743085_3 Glycosyl transferase, family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001651 268.0
BYD1_k127_3743085_4 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000001076 145.0
BYD1_k127_3784471_0 PFAM acetyl-CoA carboxylase alpha subunit K01962,K01963 - 2.1.3.15,6.4.1.2 0.0 1009.0
BYD1_k127_3784471_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 8.581e-309 972.0
BYD1_k127_3784471_2 TIGRFAM Lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 359.0
BYD1_k127_3784471_3 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 GO:0003674,GO:0003824,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016740,GO:0016746,GO:0016747,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 362.0
BYD1_k127_3784471_4 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 316.0
BYD1_k127_3784471_5 PFAM CBS domain containing protein K07168 - - 0.000000000000000000000000000000000000000000000000000003944 195.0
BYD1_k127_3784471_6 transporter antisigma-factor antagonist STAS K03321 - - 0.00000000000000000000000000000000000000000000000002829 185.0
BYD1_k127_3784471_7 outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000008416 159.0
BYD1_k127_3801636_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 9.256e-255 794.0
BYD1_k127_3801636_1 AMP-binding enzyme K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007184 565.0
BYD1_k127_3801636_2 HDOD domain - - - 0.000000000000000000000000000000000000000000000000001138 200.0
BYD1_k127_3801636_3 PFAM DSBA oxidoreductase - - - 0.00000000000000000000000000000000000000000000002412 185.0
BYD1_k127_3801636_4 Histidine kinase A domain protein - - - 0.000000003333 68.0
BYD1_k127_3833756_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 GO:0003674,GO:0003824,GO:0004812,GO:0004832,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006438,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.9 0.0 1256.0
BYD1_k127_3833756_1 TIGRFAM anaerobic ribonucleoside-triphosphate reductase K21636 - 1.1.98.6 0.0 1127.0
BYD1_k127_3833756_10 Histidine kinase K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006554 344.0
BYD1_k127_3833756_11 mRNA catabolic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003456 278.0
BYD1_k127_3833756_12 haemagglutination activity domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001661 286.0
BYD1_k127_3833756_13 PFAM Radical SAM domain protein K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000172 244.0
BYD1_k127_3833756_14 PFAM GCN5-related N-acetyltransferase K00619 - 2.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000009931 242.0
BYD1_k127_3833756_15 MJ0042 family finger-like protein - - - 0.000000000000000000000000000000000000000000000000000000000007158 220.0
BYD1_k127_3833756_16 Protein of unknown function (DUF3795) - - - 0.0000000000000000000000000000000000000000000000000000001891 197.0
BYD1_k127_3833756_17 Belongs to the purine pyrimidine phosphoribosyltransferase family K00760,K15780 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.4.2.8,6.3.4.19 0.00000000000000000000000000000000000000000000000000003016 195.0
BYD1_k127_3833756_18 PFAM Ribose galactose isomerase K01808 - 5.3.1.6 0.00000000000000000000000000000000000000000000000000318 186.0
BYD1_k127_3833756_19 - - - - 0.00000000000000000000000000000000001031 142.0
BYD1_k127_3833756_2 homocysteine S-methyltransferase K00548 - 2.1.1.13 9.833e-297 930.0
BYD1_k127_3833756_20 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000008669 126.0
BYD1_k127_3833756_21 - - - - 0.00000000000000000000000000005558 126.0
BYD1_k127_3833756_22 TIGRFAM regulatory protein, FmdB - - - 0.00000000003233 65.0
BYD1_k127_3833756_3 Heavy metal transport detoxification protein K17686 - 3.6.3.54 1.731e-263 836.0
BYD1_k127_3833756_4 Uroporphyrin-III C tetrapyrrole (Corrin Porphyrin) methyltransferase K02302,K02303,K13542 - 1.3.1.76,2.1.1.107,4.2.1.75,4.99.1.4 8.077e-205 648.0
BYD1_k127_3833756_5 TIGRFAM fructose-1,6-bisphosphatase, class II K02446 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 508.0
BYD1_k127_3833756_6 TIGRFAM acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006385 507.0
BYD1_k127_3833756_7 alcohol dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 471.0
BYD1_k127_3833756_8 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009491 464.0
BYD1_k127_3833756_9 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03086,K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008724 425.0
BYD1_k127_3857110_0 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 474.0
BYD1_k127_3857110_1 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.0000000002142 63.0
BYD1_k127_387648_0 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006926 539.0
BYD1_k127_387648_1 transporter antisigma-factor antagonist STAS K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000189 288.0
BYD1_k127_387648_2 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005063 274.0
BYD1_k127_387648_3 - - - - 0.00000001129 57.0
BYD1_k127_3977381_0 Glycosyl transferase, family 35 K00688,K16153 - 2.4.1.1,2.4.1.11 0.0 1206.0
BYD1_k127_3977381_1 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007346 533.0
BYD1_k127_3977381_2 NADPH-dependent FMN reductase K03809 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 296.0
BYD1_k127_3977381_3 PFAM Methyltransferase type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000001662 232.0
BYD1_k127_3977381_4 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000001852 180.0
BYD1_k127_3977381_5 PFAM Ferredoxin thioredoxin reductase - - - 0.00000000000000000000000000000000000000000001975 164.0
BYD1_k127_3977381_6 PFAM glutaredoxin K06191 - - 0.0000000000000000000000000000000119 129.0
BYD1_k127_401464_0 3-beta hydroxysteroid dehydrogenase/isomerase family K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 492.0
BYD1_k127_401464_1 COGs COG0618 Exopolyphosphatase-related protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 483.0
BYD1_k127_401464_2 Putative zinc binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 388.0
BYD1_k127_401464_3 - - - - 0.00000000000000001094 95.0
BYD1_k127_401464_4 - - - - 0.00002244 56.0
BYD1_k127_4050563_0 Carbamoyl-phosphate synthetase large chain domain protein - - - 2.105e-231 723.0
BYD1_k127_4050563_1 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005668 432.0
BYD1_k127_4050563_2 PFAM MotA TolQ ExbB proton channel K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002586 373.0
BYD1_k127_4050563_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009073 374.0
BYD1_k127_4050563_4 The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate K03783 - 2.4.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 333.0
BYD1_k127_4050563_5 PFAM OmpA MotB domain protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001513 256.0
BYD1_k127_4050563_6 PFAM Type IV pilus assembly PilZ - - - 0.000000000000000001469 90.0
BYD1_k127_4070043_0 PFAM ATP-binding region ATPase domain protein K10819 - 2.7.13.3 8.337e-225 711.0
BYD1_k127_4070043_1 PFAM Extracellular ligand-binding receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 546.0
BYD1_k127_4070043_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000859 337.0
BYD1_k127_4070043_3 transcriptional regulator, AsnC family - - - 0.00000000000000000000000000000000000000000000000000000000000000001053 228.0
BYD1_k127_4070043_4 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000556 224.0
BYD1_k127_4071508_0 Hydantoinase/oxoprolinase N-terminal region K01469 - 3.5.2.9 0.000000000000000000000000000000000000000000000000000000000000002065 223.0
BYD1_k127_4071508_1 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000003515 221.0
BYD1_k127_4089989_0 TIGRFAM hydrolase, TatD family K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 327.0
BYD1_k127_4089989_1 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001712 252.0
BYD1_k127_4158975_0 PFAM ATP-binding region ATPase domain protein - - - 6.797e-196 630.0
BYD1_k127_4159413_0 PFAM Pyruvate carboxyltransferase - - - 1.118e-293 911.0
BYD1_k127_4159413_1 General secretory system II protein E domain protein K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 609.0
BYD1_k127_4159413_2 PFAM type II secretion system K02653,K12278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002196 413.0
BYD1_k127_4159413_3 PFAM Ion transport 2 K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001251 406.0
BYD1_k127_4159413_4 AAA domain K02450 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 339.0
BYD1_k127_4159413_5 Type II and III secretion system protein K02666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008349 299.0
BYD1_k127_4159413_6 - - - - 0.00000000002567 70.0
BYD1_k127_4161435_0 PFAM Glycine cleavage system K00281,K00283 - 1.4.4.2 4.303e-248 791.0
BYD1_k127_4161435_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0000271,GO:0003674,GO:0003824,GO:0004373,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005977,GO:0005978,GO:0006073,GO:0006091,GO:0006112,GO:0008150,GO:0008152,GO:0008194,GO:0009058,GO:0009059,GO:0009250,GO:0009987,GO:0015980,GO:0016051,GO:0016740,GO:0016757,GO:0016758,GO:0033692,GO:0034637,GO:0034645,GO:0035251,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0046527,GO:0055114,GO:0071704,GO:1901576 2.4.1.21 1.478e-219 689.0
BYD1_k127_4161435_2 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00282 - 1.4.4.2 2.008e-203 641.0
BYD1_k127_4161435_3 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005809 503.0
BYD1_k127_4161435_4 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 299.0
BYD1_k127_4161435_5 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.00000000000000000000000000000000000000000000002307 173.0
BYD1_k127_41746_0 two-component system, chemotaxis family, sensor kinase CheA with response regulator domain K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000001896 197.0
BYD1_k127_41746_1 Response regulator receiver domain K03413 - - 0.0000000000000000000000000000000000007225 143.0
BYD1_k127_41746_2 Histidine kinase A domain protein - - - 0.00000003292 60.0
BYD1_k127_4217584_0 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 2.521e-237 753.0
BYD1_k127_4217584_1 Phosphofructokinase K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001747 574.0
BYD1_k127_4217584_2 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001633 363.0
BYD1_k127_4217584_3 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 295.0
BYD1_k127_4217584_4 Thiamine-binding protein - - - 0.00000000000000000000000007357 109.0
BYD1_k127_423463_0 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 525.0
BYD1_k127_423463_1 PFAM Amidohydrolase 2 K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005227 366.0
BYD1_k127_423463_2 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000001031 181.0
BYD1_k127_423463_3 Protein of unknown function (DUF4239) - - - 0.0000000000002213 73.0
BYD1_k127_4239417_0 glycogen phosphorylase activity K00688 - 2.4.1.1 6.031e-313 975.0
BYD1_k127_4239417_1 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000006694 115.0
BYD1_k127_4239468_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1683.0
BYD1_k127_4239468_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 7.954e-229 715.0
BYD1_k127_4239468_10 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 314.0
BYD1_k127_4239468_11 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001621 278.0
BYD1_k127_4239468_12 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000006063 228.0
BYD1_k127_4239468_13 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001095 225.0
BYD1_k127_4239468_14 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.0000000000000000000000000000000000000000000001478 181.0
BYD1_k127_4239468_15 response regulator, receiver - - - 0.00000000000000000000000000000000000000000003648 169.0
BYD1_k127_4239468_16 transmembrane signaling receptor activity K03406,K13243 - 3.1.4.52 0.00000000000000000000000000000000000006516 147.0
BYD1_k127_4239468_17 transmembrane signaling receptor activity K03406,K13243 - 3.1.4.52 0.000000000000000000000000000000000008523 140.0
BYD1_k127_4239468_18 Protein of unknown function (DUF1778) - - - 0.00000000000000000000000005867 109.0
BYD1_k127_4239468_19 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000006011 115.0
BYD1_k127_4239468_2 PFAM Adenylate cyclase, class-I K05851 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 533.0
BYD1_k127_4239468_3 PFAM SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 445.0
BYD1_k127_4239468_4 COGs COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006362 430.0
BYD1_k127_4239468_5 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002369 395.0
BYD1_k127_4239468_6 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007363 393.0
BYD1_k127_4239468_7 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 390.0
BYD1_k127_4239468_8 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004245 365.0
BYD1_k127_4239468_9 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000343 336.0
BYD1_k127_4242463_0 LUD domain - - - 5e-324 1006.0
BYD1_k127_4242463_1 PFAM L-lactate permease K03303 - - 2.112e-271 844.0
BYD1_k127_4242463_2 PFAM FAD linked oxidase domain protein K00104 - 1.1.3.15 4.953e-231 721.0
BYD1_k127_4242463_3 4Fe-4S ferredoxin iron-sulfur binding domain protein K11473 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 590.0
BYD1_k127_4242463_4 PFAM Metal-dependent hydrolase HDOD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003729 271.0
BYD1_k127_4242463_5 Lactate utilization protein B C K00782 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002633 249.0
BYD1_k127_4242463_6 Protein of unknown function (DUF4065) - - - 0.000000000000000000000000000000000000000000000004369 177.0
BYD1_k127_4242463_7 diguanylate cyclase (GGDEF) domain - - - 0.0000000000000000000000000006175 123.0
BYD1_k127_427411_0 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 488.0
BYD1_k127_427411_1 response regulator, receiver - - - 0.00000000000000000001635 91.0
BYD1_k127_427411_2 response regulator, receiver K03415 - - 0.0000000001115 62.0
BYD1_k127_430045_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead - - - 2.402e-314 981.0
BYD1_k127_430045_1 PFAM Aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 1.783e-206 651.0
BYD1_k127_430045_2 CO dehydrogenase flavoprotein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002729 278.0
BYD1_k127_430045_3 PFAM 2Fe-2S -binding K03518,K13483 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000004924 204.0
BYD1_k127_430045_4 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000006133 207.0
BYD1_k127_4308937_0 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1318.0
BYD1_k127_4308937_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1052.0
BYD1_k127_4308937_10 CBS domain containing protein K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 430.0
BYD1_k127_4308937_11 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003896 358.0
BYD1_k127_4308937_12 4Fe-4S dicluster domain K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007817 313.0
BYD1_k127_4308937_13 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006175 305.0
BYD1_k127_4308937_14 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 307.0
BYD1_k127_4308937_15 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006963 297.0
BYD1_k127_4308937_16 Transposase zinc-ribbon domain K07488 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000282 289.0
BYD1_k127_4308937_17 CBS domain containing protein K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005288 266.0
BYD1_k127_4308937_18 regulatory protein LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004216 250.0
BYD1_k127_4308937_19 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000008578 236.0
BYD1_k127_4308937_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 5.992e-256 796.0
BYD1_k127_4308937_20 regulatory protein LysR - - - 0.0000000000000000000000000000000000000000000000000000000000000000001499 241.0
BYD1_k127_4308937_21 membrane K08978 - - 0.00000000000000000000000000000000000000000000000000000000187 211.0
BYD1_k127_4308937_22 hydrogenase 4 membrane K12140 - - 0.00000000000000000000000000000000000000000000002445 177.0
BYD1_k127_4308937_23 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000002046 118.0
BYD1_k127_4308937_24 STAS domain - - - 0.000003531 54.0
BYD1_k127_4308937_3 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001082 535.0
BYD1_k127_4308937_4 plastoquinone (Complex I) K12141 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 529.0
BYD1_k127_4308937_5 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004447 503.0
BYD1_k127_4308937_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 466.0
BYD1_k127_4308937_7 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003315 473.0
BYD1_k127_4308937_8 histidine kinase A domain protein K07679 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003432 452.0
BYD1_k127_4308937_9 PFAM NADH Ubiquinone plastoquinone (complex I) K12137 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000734 447.0
BYD1_k127_4363812_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 8.684e-260 830.0
BYD1_k127_4363812_1 PFAM Aminotransferase, class IV K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005181 421.0
BYD1_k127_4363812_2 Domain of unknown function (DUF362) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005187 314.0
BYD1_k127_4363812_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 306.0
BYD1_k127_4363812_4 SMART GGDEF domain containing protein, PAS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003247 288.0
BYD1_k127_4363812_5 PFAM Glycosyl transferase, group 1 - - - 0.00000000000000000000000000000000000000000000000000000001278 211.0
BYD1_k127_4363812_6 Belongs to the SUA5 family K07566 - 2.7.7.87 0.00000000000000000000000000000000000000000005152 167.0
BYD1_k127_4435712_0 Glutamine synthetase, catalytic region K01915 - 6.3.1.2 0.0 1245.0
BYD1_k127_4435712_1 ATPase family associated with various cellular activities (AAA) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007766 431.0
BYD1_k127_4435712_2 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 402.0
BYD1_k127_4435712_3 histidine kinase A domain protein K07679 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006673 392.0
BYD1_k127_4435712_4 PFAM Nicotinamide mononucleotide transporter PnuC K03811 - - 0.00000000000000000000000000000000000000000000000000000000005007 211.0
BYD1_k127_4437939_0 PFAM isocitrate isopropylmalate dehydrogenase K00031 - 1.1.1.42 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004732 595.0
BYD1_k127_4437939_1 phosphoesterase RecJ domain protein K15986 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006335 441.0
BYD1_k127_4437939_2 PFAM chemotaxis K03406,K07216 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 404.0
BYD1_k127_4437939_3 Mg2 transporter protein K03284 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 312.0
BYD1_k127_4437939_4 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005101 244.0
BYD1_k127_4437939_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000005456 224.0
BYD1_k127_4444891_0 Hemolysin-type calcium-binding - - - 0.000000000000000000000000000000000000000000000000001159 212.0
BYD1_k127_4444891_1 Hemolysin-type calcium-binding region - - - 0.000000000000000000000000000000000000000000000000004947 199.0
BYD1_k127_4444891_2 Hemolysin-type calcium-binding region - - - 0.00000000000000000000000000000000000000000000000002923 198.0
BYD1_k127_4444891_3 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.0000000000007236 71.0
BYD1_k127_4494266_0 AAA domain K02450 - - 0.000000000000000000000000000000000000000000000000000000000000000000002814 251.0
BYD1_k127_4494266_1 Type II secretion system (T2SS), protein E, N-terminal domain K02652 - - 0.000000000000000000000000000000000000000000000000000000000000000788 226.0
BYD1_k127_4502256_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 300.0
BYD1_k127_4502256_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000887 198.0
BYD1_k127_4502256_2 PFAM nuclease (SNase domain protein) K01174 - 3.1.31.1 0.0000000000000000000000000000000000000000002696 168.0
BYD1_k127_4533910_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.268e-269 843.0
BYD1_k127_4533910_1 PFAM ComEC Rec2-related protein K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 535.0
BYD1_k127_4533910_2 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 432.0
BYD1_k127_4533910_3 Metal-dependent hydrolase HDOD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 383.0
BYD1_k127_4533910_4 photoreceptor activity K11527 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 376.0
BYD1_k127_4533910_5 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000001282 207.0
BYD1_k127_4533910_6 Histidine kinase - - - 0.00000000000000000000000000000000000000000000002199 193.0
BYD1_k127_4533910_7 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000007869 141.0
BYD1_k127_4533910_8 - - - - 0.00000000000000000000000000000385 121.0
BYD1_k127_4546580_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0071704,GO:1901135,GO:1901576 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006341 507.0
BYD1_k127_4546580_1 TIGRFAM Glucose-1-phosphate cytidylyltransferase K00978 - 2.7.7.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 397.0
BYD1_k127_4546580_10 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000007987 75.0
BYD1_k127_4546580_2 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000408,GO:0002949,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0070525,GO:0071704,GO:0090304,GO:1901360 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 401.0
BYD1_k127_4546580_3 TIGRFAM type I secretion membrane fusion protein, HlyD K02022,K11003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 367.0
BYD1_k127_4546580_4 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 315.0
BYD1_k127_4546580_5 NAD dependent epimerase dehydratase family K19180 - 1.1.1.339 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003737 294.0
BYD1_k127_4546580_6 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000001134 225.0
BYD1_k127_4546580_7 protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000001488 198.0
BYD1_k127_4546580_8 PFAM ABC transporter K11004 - - 0.00000000000000000000000000000000000000000000000002286 181.0
BYD1_k127_4546580_9 - - - - 0.000000000001782 75.0
BYD1_k127_4553762_0 histidine kinase HAMP region domain protein K03406 - - 7.463e-195 629.0
BYD1_k127_4553762_1 Domain of unknown function (DUF4881) - - - 0.0000000000004212 68.0
BYD1_k127_4553762_2 - - - - 0.00000001773 60.0
BYD1_k127_4553762_3 - - - - 0.00000008402 61.0
BYD1_k127_4598546_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1068.0
BYD1_k127_4598546_1 Major Facilitator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005016 261.0
BYD1_k127_4598546_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000000000000000000001125 213.0
BYD1_k127_4616468_0 Arsenical pump membrane protein - - - 2.987e-230 718.0
BYD1_k127_4616468_1 PFAM 6-phosphogluconate dehydrogenase NAD-binding K00020,K00042,K18121 - 1.1.1.31,1.1.1.60,1.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000702 307.0
BYD1_k127_4616468_2 pilus assembly protein PilW K02672 - - 0.000000000000000000000000000000000000000002601 167.0
BYD1_k127_4616468_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000008425 123.0
BYD1_k127_4616468_4 Nitrite and sulphite reductase 4Fe-4S - - - 0.000000000000000000000000001329 126.0
BYD1_k127_4616468_5 Ferredoxin K03616 - - 0.00000000000000000000002932 107.0
BYD1_k127_4616468_6 - - - - 0.00000000000000000004643 99.0
BYD1_k127_4616468_7 Prokaryotic N-terminal methylation motif K02671 - - 0.00000000001988 70.0
BYD1_k127_4704372_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 2273.0
BYD1_k127_4704372_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 0.0 1052.0
BYD1_k127_4704372_2 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002914 522.0
BYD1_k127_4724023_0 TIGRFAM single-stranded-DNA-specific exonuclease RecJ K07462 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 588.0
BYD1_k127_4724023_1 O-linked N-acetylglucosamine transferase SPINDLY family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009202 519.0
BYD1_k127_4724023_2 PFAM Tetratricopeptide - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005391 365.0
BYD1_k127_4724023_3 Belongs to the LarC family K09121 - 4.99.1.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000267 363.0
BYD1_k127_4724023_4 YicC domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001484 283.0
BYD1_k127_4724023_5 Membrane protein, TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007906 274.0
BYD1_k127_4724023_6 Essential for recycling GMP and indirectly, cGMP K00942 GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000003113 232.0
BYD1_k127_4724023_7 Belongs to the UPF0296 family K09777 - - 0.00000000000000000000000000000000141 134.0
BYD1_k127_4724023_8 Response regulator receiver domain K03413 - - 0.0000000000000000000000000001415 119.0
BYD1_k127_4724023_9 PFAM Hpt domain protein - - - 0.0000000000000000000001212 100.0
BYD1_k127_4729734_0 PFAM Ankyrin - - - 6.434e-256 804.0
BYD1_k127_4729734_1 Belongs to the LDH MDH superfamily. LDH family K00016,K00024 - 1.1.1.27,1.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001763 483.0
BYD1_k127_4729734_3 Belongs to the glycosyl hydrolase 18 family - - - 0.0000000000000000000000000000000002602 146.0
BYD1_k127_4729734_4 cellulase activity - - - 0.000000000000000000000000207 119.0
BYD1_k127_4771171_0 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000001915 184.0
BYD1_k127_4771171_1 PFAM 2-hydroxyglutaryl-CoA dehydratase D-component - - - 0.0000000000000000000000000000000000000000005191 165.0
BYD1_k127_4801699_0 TIGRFAM Phage - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000685 310.0
BYD1_k127_4801699_1 head morphogenesis - - - 0.0000000000000000000000000000000000000000000000000000000000000001853 237.0
BYD1_k127_4801699_2 Phage minor tail protein L - - - 0.0000000000000000000000000000000000000000002674 164.0
BYD1_k127_4801699_3 Mu-like prophage major head subunit gpT - - - 0.00000000000000000000000000000000000001038 149.0
BYD1_k127_4801699_4 Lambda phage tail tape-measure protein (Tape_meas_lam_C) - - - 0.0000000000000000000000000000000000001851 164.0
BYD1_k127_4801699_5 Phage virion morphogenesis family - - - 0.000000000000000000000000000000005909 136.0
BYD1_k127_4801699_6 Protein of unknown function (DUF935) - - - 0.000000000000000000000002154 119.0
BYD1_k127_4801699_7 Protein of unknown function (DUF1320) - - - 0.000000000000000005583 89.0
BYD1_k127_4801699_8 - - - - 0.00000000000008247 77.0
BYD1_k127_4801993_0 An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay K12574 - - 4.159e-253 790.0
BYD1_k127_4801993_1 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 8.236e-194 618.0
BYD1_k127_4801993_10 Belongs to the DegT DnrJ EryC1 family K12452 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 302.0
BYD1_k127_4801993_11 response regulator, receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000001707 228.0
BYD1_k127_4801993_12 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000306 222.0
BYD1_k127_4801993_13 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000004878 219.0
BYD1_k127_4801993_14 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000009303 216.0
BYD1_k127_4801993_15 Trypsin - - - 0.000000000000000000000000000000000000000000000000000000005861 210.0
BYD1_k127_4801993_16 Glycosyltransferase family 17 - - - 0.000000000000000000000000000000000000000000000000007772 203.0
BYD1_k127_4801993_17 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000005137 182.0
BYD1_k127_4801993_18 NAD-dependent epimerase dehydratase K01784 - 5.1.3.2 0.00000000000000000000000006689 118.0
BYD1_k127_4801993_19 PFAM Type IV pilus assembly PilZ - - - 0.000000000000000000005414 96.0
BYD1_k127_4801993_2 PFAM Ribonuclease II K01147 - 3.1.13.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008173 620.0
BYD1_k127_4801993_20 C2H2-type zinc finger - - - 0.0002547 45.0
BYD1_k127_4801993_3 HD domain K07023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 523.0
BYD1_k127_4801993_4 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001447 434.0
BYD1_k127_4801993_5 Belongs to the asparaginase 1 family K01424 - 3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 418.0
BYD1_k127_4801993_6 NMT1-like family K02051 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001148 406.0
BYD1_k127_4801993_7 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 406.0
BYD1_k127_4801993_8 PFAM fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001078 319.0
BYD1_k127_4801993_9 PFAM Uncharacterised ArCR, COG2043 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000643 313.0
BYD1_k127_4872908_0 ABC transporter K06020 - 3.6.3.25 6.315e-283 880.0
BYD1_k127_4872908_1 PFAM type I phosphodiesterase nucleotide pyrophosphatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006818 477.0
BYD1_k127_4872908_2 antisigma factor binding K04749,K04757,K06378 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 447.0
BYD1_k127_4872908_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001092 283.0
BYD1_k127_4872908_4 PFAM Smr protein MutS2 - - - 0.0000000000000000000000000000000000000000000000000000000341 205.0
BYD1_k127_4872908_5 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000000000335 141.0
BYD1_k127_4872908_6 Putative transposase, YhgA-like - - - 0.0000000000000000001413 96.0
BYD1_k127_4944045_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 3.503e-204 642.0
BYD1_k127_4944045_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K07138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 484.0
BYD1_k127_4944045_2 AMP-binding enzyme K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 427.0
BYD1_k127_4944045_3 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008987,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016053,GO:0017144,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0019805,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046496,GO:0046874,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0055086,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001258 383.0
BYD1_k127_4944045_4 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001863 269.0
BYD1_k127_4944045_5 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004816 259.0
BYD1_k127_4944045_6 polysaccharide biosynthetic process K03379 - 1.14.13.22 0.000000000000000000000000000000000000000009481 171.0
BYD1_k127_4944045_7 TIGRFAM regulatory protein, FmdB - - - 0.00000000000000000000000004205 111.0
BYD1_k127_4944045_9 EamA-like transporter family - - - 0.0000000000000007041 80.0
BYD1_k127_4946354_0 Integral membrane sensor signal transduction histidine kinase K02482 - 2.7.13.3 4.322e-207 658.0
BYD1_k127_4946354_1 Pyruvate phosphate dikinase, PEP K01007 - 2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000269 379.0
BYD1_k127_4946354_2 Histidine kinase K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006598 297.0
BYD1_k127_4946354_3 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003707 289.0
BYD1_k127_4946354_4 CheA signal transduction histidine kinase - - - 0.00000000000000000000000000000000000000000000000000003379 196.0
BYD1_k127_4946354_5 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000000007078 173.0
BYD1_k127_4946354_6 PFAM response regulator receiver - - - 0.00000000000000000000000000000000000000000001429 166.0
BYD1_k127_4946354_7 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000000002009 133.0
BYD1_k127_5001858_0 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006085 477.0
BYD1_k127_5001858_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006259 248.0
BYD1_k127_5001858_2 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.000000000000000000000000000000000000000007523 154.0
BYD1_k127_5001858_3 This protein binds to 23S rRNA in the presence of protein L20 K02888 GO:0003674,GO:0003735,GO:0005198 - 0.00000000000000000000000000000000002051 137.0
BYD1_k127_5001858_4 peptidyl-tyrosine sulfation - - - 0.0000000000000000009571 94.0
BYD1_k127_5001858_5 glycosyl transferase group 1 - - - 0.00000000000000004891 85.0
BYD1_k127_5001858_6 two component, sigma54 specific, transcriptional regulator K02481 - - 0.000000000008229 68.0
BYD1_k127_5022068_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008743 445.0
BYD1_k127_5022068_1 carbohydrate metabolic process - - - 0.0000000000000000000000000000000000000000000001638 179.0
BYD1_k127_5022068_2 Glycosyl transferase 4-like - - - 0.000000009624 66.0
BYD1_k127_5113908_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 5.186e-319 992.0
BYD1_k127_5113908_1 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003387 433.0
BYD1_k127_5113908_2 O-linked N-acetylglucosamine transferase, SPINDLY family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 420.0
BYD1_k127_5114146_0 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 GO:0003674,GO:0003824,GO:0004125,GO:0006139,GO:0006399,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016740,GO:0016785,GO:0018130,GO:0019438,GO:0032774,GO:0034641,GO:0034654,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0046483,GO:0071704,GO:0090304,GO:0097056,GO:0140098,GO:0140101,GO:1901360,GO:1901362,GO:1901576 2.9.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008932 561.0
BYD1_k127_5114146_1 PFAM AAA ATPase central domain protein K07478 - - 0.0000000000000000000000000000000000002007 142.0
BYD1_k127_5114146_2 - - - - 0.00000001457 59.0
BYD1_k127_5121682_0 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000421 403.0
BYD1_k127_5121682_1 COG1091 dTDP-4-dehydrorhamnose reductase K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001319 310.0
BYD1_k127_5121682_2 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016740,GO:0016741,GO:0018364,GO:0019538,GO:0032259,GO:0036009,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.1.1.297 0.000000000000000000000000000000000000000000000000000000000000000000000001335 256.0
BYD1_k127_5121682_3 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.00000000000000000000000000000000000000000000000000000000001083 213.0
BYD1_k127_5121682_4 Mut7-C RNAse domain K09122 - - 0.00000000000000000000000000000000000000000000000000000000003977 215.0
BYD1_k127_5121682_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000001354 193.0
BYD1_k127_5121682_6 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000148 159.0
BYD1_k127_5121682_7 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.0000000000000000000000000000000000000005941 158.0
BYD1_k127_5121682_8 - - - - 0.00000000000000000000000603 106.0
BYD1_k127_5188017_0 Large extracellular alpha-helical protein K06894 - - 0.0 1700.0
BYD1_k127_5188017_1 Virulence protein RhuM family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 319.0
BYD1_k127_5188017_2 CBS domain containing protein K06189 - - 0.000000000000000000000000000000000000000000000000000000000002104 213.0
BYD1_k127_5196426_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000001457 210.0
BYD1_k127_5196426_1 repeat-containing protein - - - 0.00000000000000001155 91.0
BYD1_k127_5207112_0 PFAM cytochrome c biogenesis protein transmembrane region K04084 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 461.0
BYD1_k127_5207112_1 TIGRFAM drug resistance transporter, EmrB QacA subfamily - - - 0.00000000000000000000000000007631 118.0
BYD1_k127_5207112_2 Diguanylate cyclase - - - 0.000000000000000000006254 107.0
BYD1_k127_5207112_3 His Kinase A (phosphoacceptor) domain - - - 0.0000001554 64.0
BYD1_k127_5218268_0 DEAD DEAH box helicase domain protein K06877 - - 1.52e-315 993.0
BYD1_k127_5218268_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 GO:0003674,GO:0003824,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016879,GO:0016884,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0050567,GO:0070681,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.3.5.6,6.3.5.7 3.204e-220 691.0
BYD1_k127_5218268_10 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.0000000000000000000000000000000000000000004877 160.0
BYD1_k127_5218268_11 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.000000000000000000000000000000000000542 146.0
BYD1_k127_5218268_12 Putative cyclase - - - 0.000000000000000000000000001183 119.0
BYD1_k127_5218268_13 PFAM Sporulation K03749 - - 0.0003949 52.0
BYD1_k127_5218268_2 agmatine deiminase activity K10536 - 3.5.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 416.0
BYD1_k127_5218268_3 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 377.0
BYD1_k127_5218268_4 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 382.0
BYD1_k127_5218268_5 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 328.0
BYD1_k127_5218268_6 Protein of unknown function DUF116 K09729 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002499 315.0
BYD1_k127_5218268_7 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001391 265.0
BYD1_k127_5218268_8 Protein of unknown function (DUF4254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000005673 234.0
BYD1_k127_5218268_9 May be involved in recombination - - - 0.000000000000000000000000000000000000000000000000000001706 196.0
BYD1_k127_5272943_0 Belongs to the glycosyl hydrolase 57 family - - - 1.339e-240 765.0
BYD1_k127_5272943_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 7.13e-217 679.0
BYD1_k127_5272943_2 PFAM Phosphomethylpyrimidine kinase type-1 K00941,K14153,K21219 - 2.5.1.3,2.7.1.49,2.7.4.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004172 438.0
BYD1_k127_5272943_3 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 318.0
BYD1_k127_5272943_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005683 265.0
BYD1_k127_5272943_5 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 0.0000002329 56.0
BYD1_k127_5274443_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 2.631e-281 875.0
BYD1_k127_5274443_1 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 1.429e-212 675.0
BYD1_k127_5274443_10 Tetratricopeptide repeat - - - 0.0000000000000000000000003882 115.0
BYD1_k127_5274443_2 PFAM peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002749 459.0
BYD1_k127_5274443_3 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 398.0
BYD1_k127_5274443_4 PFAM Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain K02823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002225 276.0
BYD1_k127_5274443_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000217 229.0
BYD1_k127_5274443_6 Fe-S cluster domain protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000000004327 229.0
BYD1_k127_5274443_7 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000003529 205.0
BYD1_k127_5274443_8 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000004458 172.0
BYD1_k127_5274443_9 Domain of unknown function (DUF3390) K18929 - - 0.0000000000000000000000000000000000003362 150.0
BYD1_k127_5282060_0 histidine kinase HAMP region domain protein K03406,K07216 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003179 439.0
BYD1_k127_5282060_1 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000006551 231.0
BYD1_k127_5282060_2 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000001129 148.0
BYD1_k127_5282060_3 PFAM Cupin 2 conserved barrel domain protein - - - 0.0000000000000000000000000000001232 128.0
BYD1_k127_5288241_0 Transport of potassium into the cell K03549 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015672,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0098655,GO:0098660,GO:0098662 - 2.362e-222 706.0
BYD1_k127_5288241_1 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 519.0
BYD1_k127_5288241_2 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002351 251.0
BYD1_k127_5288241_3 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000002152 224.0
BYD1_k127_5288241_4 K transport system, NAD-binding component - - - 0.0000000000000000000000000000000000000000000001102 182.0
BYD1_k127_536238_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 329.0
BYD1_k127_536238_1 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.00000000000000000000000000000000003834 138.0
BYD1_k127_5375368_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.0 1417.0
BYD1_k127_5375368_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003461 400.0
BYD1_k127_5375368_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005886 279.0
BYD1_k127_5375368_3 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000007006 148.0
BYD1_k127_5375368_4 cheY-homologous receiver domain K14492 - - 0.0003276 44.0
BYD1_k127_537858_0 response regulator, receiver K01338 - 3.4.21.53 0.0 1010.0
BYD1_k127_537858_1 ImcF-related N-terminal domain K11891 - - 3.102e-224 736.0
BYD1_k127_537858_10 PFAM ABC transporter related K02028,K10004 - 3.6.3.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 430.0
BYD1_k127_537858_11 PFAM Extracellular solute-binding protein, family 3 K02030,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003494 402.0
BYD1_k127_537858_12 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE K11893 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002747 402.0
BYD1_k127_537858_13 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 384.0
BYD1_k127_537858_14 TIGRFAM polar amino acid ABC transporter, inner membrane subunit K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 369.0
BYD1_k127_537858_15 SMART Elongator protein 3 MiaB NifB K07139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 362.0
BYD1_k127_537858_16 amino acid ABC transporter K02029 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003995 348.0
BYD1_k127_537858_17 Belongs to the 'phage' integrase family. XerC subfamily K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005357 351.0
BYD1_k127_537858_18 Peptidase M10 serralysin C terminal K01406 - 3.4.24.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 307.0
BYD1_k127_537858_19 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003803 286.0
BYD1_k127_537858_2 Belongs to the flagella basal body rod proteins family K02396 - - 8.069e-223 713.0
BYD1_k127_537858_20 DNA alkylation repair enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000008903 234.0
BYD1_k127_537858_21 Peptidase M10 serralysin C terminal K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000003404 228.0
BYD1_k127_537858_22 - - - - 0.000000000000000000000000000000000000000000000000000000003016 208.0
BYD1_k127_537858_23 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.0000000000000000000000000000000000000000000000000000001036 199.0
BYD1_k127_537858_24 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.00000000000000000000000000000000000000000000001419 177.0
BYD1_k127_537858_25 - - - - 0.00000000000000000000000000000000000000000000001986 176.0
BYD1_k127_537858_26 Nucleotidyltransferase substrate binding protein like - - - 0.000000000000000000000000000000000000000002669 160.0
BYD1_k127_537858_27 Type VI secretion system protein DotU K11892 - - 0.000000000000000000000000000000000001848 146.0
BYD1_k127_537858_28 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 - - - 0.00000000000000000000000000000001423 134.0
BYD1_k127_537858_29 PFAM FlgN family protein - - - 0.00000000000000000000000000000001925 132.0
BYD1_k127_537858_3 Sigma-54 factor interaction domain-containing protein K07713 - - 1.39e-214 677.0
BYD1_k127_537858_30 PFAM DNA polymerase, beta domain protein region - - - 0.0000000000000000000000000001181 120.0
BYD1_k127_537858_31 - - - - 0.0000000000000000000000000004044 115.0
BYD1_k127_537858_32 Peptidase, M23 - - - 0.0000000000000000000000007571 109.0
BYD1_k127_537858_33 Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum K13626 - - 0.00000000000000000008501 94.0
BYD1_k127_537858_34 Methyltransferase, chemotaxis proteins K13486 - - 0.0004634 50.0
BYD1_k127_537858_4 histidine kinase HAMP region domain protein K02482 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 594.0
BYD1_k127_537858_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 540.0
BYD1_k127_537858_6 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 539.0
BYD1_k127_537858_7 SMART protein phosphatase 2C domain protein K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 508.0
BYD1_k127_537858_8 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 488.0
BYD1_k127_537858_9 TIGRFAM Flagellar hook-associated protein 3 K02397 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004221 456.0
BYD1_k127_5412912_0 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 470.0
BYD1_k127_5412912_1 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007589 296.0
BYD1_k127_5412912_2 Nodulation protein S (NodS) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004587 246.0
BYD1_k127_5412912_3 Cupin - - - 0.0000000000000000000000000000000000000005319 152.0
BYD1_k127_5412912_4 glycosyl transferase K20444 - - 0.0000000000000000000000000000001521 144.0
BYD1_k127_5412912_5 Putative zinc binding domain - - - 0.00000000000000000009419 89.0
BYD1_k127_5459905_0 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 2.092e-273 846.0
BYD1_k127_5459905_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 2.681e-261 811.0
BYD1_k127_5459905_10 response regulator, receiver K03413 - - 0.0000000000000000000000000003037 119.0
BYD1_k127_5459905_11 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.00000000000000000000000313 107.0
BYD1_k127_5459905_12 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.00000000000000000006798 91.0
BYD1_k127_5459905_13 phosphorelay signal transduction system - - - 0.00004373 53.0
BYD1_k127_5459905_2 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 415.0
BYD1_k127_5459905_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 409.0
BYD1_k127_5459905_4 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009636 372.0
BYD1_k127_5459905_5 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 0.0000000000000000000000000000000000000000000000000000000000000002328 225.0
BYD1_k127_5459905_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000000000000000000007227 206.0
BYD1_k127_5459905_7 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016469,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0045259,GO:0045261,GO:0046034,GO:0046390,GO:0046483,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000000000000000000000000000000000000000000004783 181.0
BYD1_k127_5459905_8 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045263,GO:0045264,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000000000000005697 172.0
BYD1_k127_5459905_9 ATPase (AAA superfamily - - - 0.000000000000000000000000000000000000000008112 164.0
BYD1_k127_5478123_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K02474,K13015 - 1.1.1.136 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007128 601.0
BYD1_k127_5478123_1 glutathionylspermidine amidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003735 440.0
BYD1_k127_5478123_10 Hypothetical methyltransferase - - - 0.000000000000000000000000000000002476 139.0
BYD1_k127_5478123_11 Transposase - - - 0.000000000000000000000000000002516 142.0
BYD1_k127_5478123_12 PFAM Glycosyl transferase family 2 - - - 0.0000000000000242 89.0
BYD1_k127_5478123_13 - - - - 0.0000000000002489 71.0
BYD1_k127_5478123_2 Protein of unknown function DUF262 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 415.0
BYD1_k127_5478123_3 Sulfite reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008139 310.0
BYD1_k127_5478123_4 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000119 276.0
BYD1_k127_5478123_5 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002323 291.0
BYD1_k127_5478123_6 Protein of unknown function (DUF3696) - - - 0.000000000000000000000000000000000000000000000000000000000003991 223.0
BYD1_k127_5478123_7 Glycosyl transferase, family 2 K13500 - 2.4.1.175,2.4.1.226 0.0000000000000000000000000000000000000000000000000000001237 226.0
BYD1_k127_5478123_8 Domain of Unknown Function (DUF350) - - - 0.00000000000000000000000000000000000000000000000000008931 196.0
BYD1_k127_5478123_9 - - - - 0.0000000000000000000000000000000000000000000000000002326 197.0
BYD1_k127_5507158_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.147e-214 672.0
BYD1_k127_5507158_1 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008937 534.0
BYD1_k127_5507158_2 Iron-containing alcohol dehydrogenase K00001,K01714,K13954 - 1.1.1.1,4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 412.0
BYD1_k127_5507158_3 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003392 318.0
BYD1_k127_5507158_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000004232 252.0
BYD1_k127_5531868_0 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008045 509.0
BYD1_k127_5531868_1 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710,K01784,K12450 - 4.2.1.46,4.2.1.76,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009217 383.0
BYD1_k127_5531868_10 SIS domain K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000001419 183.0
BYD1_k127_5531868_11 Mu-like prophage I protein - - - 0.0000000000000000000000000000000000003623 151.0
BYD1_k127_5531868_12 - - - - 0.0000000000000000000000000000000000006271 143.0
BYD1_k127_5531868_13 SPTR N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD - - - 0.000000000000000000000000000000000001276 144.0
BYD1_k127_5531868_14 - - - - 0.0000000000000000000000000000166 122.0
BYD1_k127_5531868_15 Concanavalin A-like lectin/glucanases superfamily - - - 0.000000000000000000000000001301 120.0
BYD1_k127_5531868_16 - - - - 0.000000000000000000000000008502 119.0
BYD1_k127_5531868_17 Protein of unknown function (DUF1320) - - - 0.000000000000000000000001247 108.0
BYD1_k127_5531868_18 - - - - 0.0000000000000000000006846 100.0
BYD1_k127_5531868_19 - - - - 0.000000000002365 68.0
BYD1_k127_5531868_2 PFAM LOR SDH bifunctional enzyme conserved region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002554 384.0
BYD1_k127_5531868_20 - - - - 0.00000000005904 68.0
BYD1_k127_5531868_21 regulation of DNA-templated transcription, elongation - - - 0.0000000001144 71.0
BYD1_k127_5531868_22 - - - - 0.0000001392 62.0
BYD1_k127_5531868_23 Phage virion morphogenesis - - - 0.000006483 55.0
BYD1_k127_5531868_25 Prophage tail length tape measure protein - - - 0.000183 55.0
BYD1_k127_5531868_3 Cytidylyltransferase-like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006652 379.0
BYD1_k127_5531868_4 Mu-like prophage major head subunit gpT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002365 340.0
BYD1_k127_5531868_5 PFAM ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 310.0
BYD1_k127_5531868_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004197 275.0
BYD1_k127_5531868_7 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000000000000000000000000000000000001118 235.0
BYD1_k127_5531868_8 Phage tail tape measure protein, TP901 family - - - 0.00000000000000000000000000000000000000000000000000000000000001336 241.0
BYD1_k127_5531868_9 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000000000000000000000000000000000000009043 197.0
BYD1_k127_5595608_0 PFAM UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005096 473.0
BYD1_k127_5595608_1 polysaccharide export K01991 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000478 352.0
BYD1_k127_5595608_10 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000004294 66.0
BYD1_k127_5595608_2 PFAM glycosyl transferase family 2 K07011 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004148 316.0
BYD1_k127_5595608_3 COG0642 Signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006345 323.0
BYD1_k127_5595608_4 Calcineurin-like phosphoesterase K07098 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002583 284.0
BYD1_k127_5595608_5 serine acetyltransferase K00640,K03819 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005424 266.0
BYD1_k127_5595608_6 Glycosyl transferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006539 294.0
BYD1_k127_5595608_7 Sigma factor PP2C-like phosphatases K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003928 259.0
BYD1_k127_5595608_8 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000001583 245.0
BYD1_k127_5595608_9 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.000000000000000008936 87.0
BYD1_k127_5634707_0 Carbon starvation protein CstA K06200 - - 3.5e-323 996.0
BYD1_k127_5634707_1 histidine kinase internal region K02478,K07704 - 2.7.13.3 4.086e-246 771.0
BYD1_k127_5634707_2 SMART Elongator protein 3 MiaB NifB - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 497.0
BYD1_k127_5634707_3 Two component transcriptional regulator, LytTR family K02477,K07705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 348.0
BYD1_k127_5634707_4 Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S- adenosylmethionine. Has broad substrate specificity with 6- aminopurine nucleosides as preferred substrates K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003122 315.0
BYD1_k127_5634707_5 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000003179 192.0
BYD1_k127_5634707_6 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000000001826 135.0
BYD1_k127_5651806_0 pfam abc K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004711 455.0
BYD1_k127_5651806_1 PFAM ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005632 321.0
BYD1_k127_5651806_2 HlyD family secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002832 307.0
BYD1_k127_5651806_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000000000000000000000000000000000000002137 236.0
BYD1_k127_5651806_4 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000002491 131.0
BYD1_k127_5656394_0 Major Facilitator Superfamily K08177 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 473.0
BYD1_k127_5656394_1 PFAM Exonuclease RNase T and DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000001891 238.0
BYD1_k127_5656394_2 CBS domain containing protein K07182 - - 0.0000000000000000000000000000000000000000000000000000000000002073 224.0
BYD1_k127_5656649_0 Belongs to the beta-ketoacyl-ACP synthases family K00647 - 2.3.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 526.0
BYD1_k127_5656649_1 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 403.0
BYD1_k127_5656649_2 PFAM FAD dependent oxidoreductase K09516 - 1.3.99.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 358.0
BYD1_k127_5656649_3 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 304.0
BYD1_k127_5656649_4 Domain of unknown function (DUF4410) - - - 0.000000000001389 75.0
BYD1_k127_5656649_5 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.00000000421 60.0
BYD1_k127_5656649_6 Winged helix-turn helix - - - 0.0001393 44.0
BYD1_k127_5678472_0 TIGRFAM phenylalanyl-tRNA synthetase, beta subunit K01890 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 6.917e-275 866.0
BYD1_k127_5678472_1 PFAM WD40 domain protein beta Propeller K03641 GO:0003674,GO:0005215,GO:0006810,GO:0008150,GO:0019534,GO:0022857,GO:0051179,GO:0051234,GO:0055085,GO:1901998 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004738 428.0
BYD1_k127_5678472_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000102 175.0
BYD1_k127_5678472_11 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000474 151.0
BYD1_k127_5678472_12 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000008003 142.0
BYD1_k127_5678472_13 TonB C terminal K03646 - - 0.0000000000000000000000000000000005807 141.0
BYD1_k127_5678472_14 Regulatory protein MerR - - - 0.000000000000000000000000004653 113.0
BYD1_k127_5678472_15 TIGRFAM regulatory protein, FmdB - - - 0.0000000000000000000003252 98.0
BYD1_k127_5678472_2 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 GO:0003674,GO:0003824,GO:0004418,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016740,GO:0016765,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007407 392.0
BYD1_k127_5678472_3 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006171 360.0
BYD1_k127_5678472_4 Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family K03215 - 2.1.1.190 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 299.0
BYD1_k127_5678472_5 NAD-dependent epimerase dehydratase K07071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006369 284.0
BYD1_k127_5678472_6 SMART Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001152 255.0
BYD1_k127_5678472_7 PFAM MotA TolQ ExbB proton channel K03561,K03562 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006867 248.0
BYD1_k127_5678472_8 SMART Transcription regulator, AsnC-type - - - 0.0000000000000000000000000000000000000000000000000000000000000000005118 231.0
BYD1_k127_5678472_9 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000000000000000000000000000000003685 196.0
BYD1_k127_5739983_0 PFAM CoA-binding domain protein K01905,K22224 - 6.2.1.13 5.229e-309 962.0
BYD1_k127_5739983_1 PFAM serine dehydratase alpha chain K01752 - 4.3.1.17 8.887e-197 623.0
BYD1_k127_5739983_10 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000000005845 156.0
BYD1_k127_5739983_11 PFAM Uncharacterised protein family (UPF0153) - - - 0.00000000000000000000000000000000000003344 150.0
BYD1_k127_5739983_12 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000003206 141.0
BYD1_k127_5739983_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072,K12257 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 550.0
BYD1_k127_5739983_3 PFAM DRTGG domain K06873 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000336 467.0
BYD1_k127_5739983_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 429.0
BYD1_k127_5739983_5 Pfam Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 364.0
BYD1_k127_5739983_6 Protein conserved in bacteria K01002 - 2.7.8.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000425 339.0
BYD1_k127_5739983_7 Tryptophan/tyrosine permease family K03834,K03835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 294.0
BYD1_k127_5739983_8 Belongs to the peptidase S11 family K01286,K07258,K07262 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006141 289.0
BYD1_k127_5739983_9 lytic transglycosylase activity - - - 0.000000000000000000000000000000000000000000000000000000008565 211.0
BYD1_k127_5779134_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 469.0
BYD1_k127_5779134_1 PAS fold K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008688 465.0
BYD1_k127_5779134_2 PFAM chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000492 426.0
BYD1_k127_5779134_3 Methyl-accepting chemotaxis protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 388.0
BYD1_k127_5779134_4 LysE type translocator - - - 0.0000000000000000000000000000000000000000000000000000000000000007579 225.0
BYD1_k127_5779134_5 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000000001244 205.0
BYD1_k127_585533_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 1.218e-229 739.0
BYD1_k127_585533_1 PFAM Aminoglycoside phosphotransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 523.0
BYD1_k127_585533_10 Glycosyltransferase family 17 - - - 0.0000000000000000000000000000000000000000002628 180.0
BYD1_k127_585533_11 regulator K18831 - - 0.0000000000000000000000000000000000001752 145.0
BYD1_k127_585533_12 - - - - 0.000000000000000000000000000202 119.0
BYD1_k127_585533_13 - - - - 0.00000000000000000000004034 112.0
BYD1_k127_585533_14 peptidyl-tyrosine sulfation - - - 0.00000000000001196 88.0
BYD1_k127_585533_15 Methyltransferase FkbM domain - - - 0.00000000000009106 85.0
BYD1_k127_585533_16 -O-antigen K02847 - - 0.0000000000001231 82.0
BYD1_k127_585533_2 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 524.0
BYD1_k127_585533_3 Memo-like protein K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009372 506.0
BYD1_k127_585533_4 Papain family cysteine protease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 441.0
BYD1_k127_585533_5 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001759 383.0
BYD1_k127_585533_6 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000947 310.0
BYD1_k127_585533_7 PFAM Cytochrome c assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006755 290.0
BYD1_k127_585533_8 Chromatin associated protein KTI12 K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000003639 228.0
BYD1_k127_585533_9 Two component, sigma54 specific, transcriptional regulator, Fis family K02481 - - 0.0000000000000000000000000000000000000000000000000000000000004616 212.0
BYD1_k127_5855880_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000009177 201.0
BYD1_k127_5855880_1 cheY-homologous receiver domain - - - 0.000000000000000000008821 96.0
BYD1_k127_5855880_2 Pyridoxamine 5'-phosphate oxidase K07005 - - 0.00000000000234 69.0
BYD1_k127_5865558_0 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K11527 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003232 353.0
BYD1_k127_5865558_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000004718 225.0
BYD1_k127_5869668_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003949 580.0
BYD1_k127_5869668_1 PFAM Type II secretion system protein E K02454,K02652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 580.0
BYD1_k127_5869668_10 Domain of unknown function (DUF4337) - - - 0.00000000000000000000000000000000000000000000000000000005946 201.0
BYD1_k127_5869668_11 PFAM Metal-dependent phosphohydrolase, HD - - - 0.00000000000000000000000000000000000000000000000000002989 197.0
BYD1_k127_5869668_12 Acetyltransferase, GNAT K06977 - - 0.00000000000000000000000000000000000000004174 158.0
BYD1_k127_5869668_13 outer membrane chaperone Skp (OmpH) K06142 - - 0.0000000000000000000000000000362 125.0
BYD1_k127_5869668_14 - - - - 0.000000000000000000000001056 106.0
BYD1_k127_5869668_15 Chitin binding domain K20547 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0008150,GO:0010035,GO:0010038,GO:0016020,GO:0031090,GO:0042221,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050896,GO:0098588,GO:0098805 3.2.1.14 0.00000002795 66.0
BYD1_k127_5869668_16 Bacterial Ig-like domain (group 2) - - - 0.0000004718 61.0
BYD1_k127_5869668_2 Biotin-lipoyl like K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000701 456.0
BYD1_k127_5869668_3 response regulator, receiver K03415 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007297 432.0
BYD1_k127_5869668_4 Asparagine synthase, glutamine-hydrolyzing K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009841 416.0
BYD1_k127_5869668_5 PFAM type II secretion system K02455,K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 396.0
BYD1_k127_5869668_6 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 346.0
BYD1_k127_5869668_7 SMART cellulose binding type IV K11751 - 3.1.3.5,3.6.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 311.0
BYD1_k127_5869668_8 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006858 294.0
BYD1_k127_5869668_9 Domain of unknown function (DUF4384) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001661 250.0
BYD1_k127_5884108_0 PFAM Glutamine amidotransferase, class-II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 556.0
BYD1_k127_5884108_1 Belongs to the glutamate synthase family K22083 - 2.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005155 531.0
BYD1_k127_5884108_2 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase K00362 - 1.7.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 510.0
BYD1_k127_5884108_3 PFAM glutamate synthase alpha subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 344.0
BYD1_k127_5884108_4 4Fe-4S dicluster domain K00196,K05796 - - 0.000000000000000000000000000000000000000000000000000000000005936 210.0
BYD1_k127_5884108_5 TIGRFAM preprotein translocase, YajC subunit K03210 - - 0.0000000000000000000000000000000007301 133.0
BYD1_k127_5884108_6 double-stranded DNA endodeoxyribonuclease activity - - - 0.0000000000168 69.0
BYD1_k127_5930052_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 4.285e-220 703.0
BYD1_k127_5930052_1 TIGRFAM argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 599.0
BYD1_k127_5930052_10 PFAM Colicin V production protein K03558 - - 0.000000000000000000000000008797 117.0
BYD1_k127_5930052_2 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02584,K15836,K21009 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 587.0
BYD1_k127_5930052_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 512.0
BYD1_k127_5930052_4 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009086,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0019509,GO:0019752,GO:0043094,GO:0043102,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046523,GO:0071265,GO:0071267,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 488.0
BYD1_k127_5930052_5 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 482.0
BYD1_k127_5930052_6 Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur K03146 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000249 400.0
BYD1_k127_5930052_7 PFAM MazG nucleotide pyrophosphohydrolase K02499,K04765 - 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001559 276.0
BYD1_k127_5930052_8 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000136 242.0
BYD1_k127_5930052_9 PFAM acylneuraminate cytidylyltransferase - - - 0.00000000000000000000000000000000000000571 154.0
BYD1_k127_5966584_0 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005709 531.0
BYD1_k127_5966584_1 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family K13283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 355.0
BYD1_k127_5966584_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000003227 193.0
BYD1_k127_5969005_0 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 478.0
BYD1_k127_5969005_1 PFAM ABC transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 367.0
BYD1_k127_5969005_2 ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005094 366.0
BYD1_k127_5969005_3 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002307 269.0
BYD1_k127_5969005_4 Asparagine synthase K01953 - 6.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000001657 269.0
BYD1_k127_5969005_5 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000004593 235.0
BYD1_k127_5969005_6 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000003605 227.0
BYD1_k127_5969005_7 transposase or invertase - - - 0.000000000000000000000000000000000000000000000000000000000007724 215.0
BYD1_k127_601012_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1102.0
BYD1_k127_601012_1 PFAM cell divisionFtsK SpoIIIE K03466 - - 1.596e-204 663.0
BYD1_k127_601012_10 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005458 327.0
BYD1_k127_601012_11 Type I restriction enzyme R protein N terminus (HSDR_N) - - - 0.000000000000000000000000000000000000000000000000001636 188.0
BYD1_k127_601012_12 May nick specific sequences that contain T G mispairs resulting from m5C-deamination K07458 - - 0.0000000000000000000000000000000000000000000005397 170.0
BYD1_k127_601012_13 PFAM GUN4 domain protein - - - 0.0000000000000000000000000000000000000000001361 171.0
BYD1_k127_601012_14 EamA-like transporter family - - - 0.00000000000000000000001044 102.0
BYD1_k127_601012_15 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000003736 89.0
BYD1_k127_601012_16 - - - - 0.00000000000001139 77.0
BYD1_k127_601012_17 Domain of unknown function (DUF333) K09712 - - 0.0000000000001659 74.0
BYD1_k127_601012_18 - - - - 0.0000000008167 68.0
BYD1_k127_601012_19 - - - - 0.0000002124 53.0
BYD1_k127_601012_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - 3.376e-200 631.0
BYD1_k127_601012_3 Phosphate uptake regulator, PhoU - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 584.0
BYD1_k127_601012_4 metal-dependent phosphohydrolase HD region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001821 494.0
BYD1_k127_601012_5 PHP domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 485.0
BYD1_k127_601012_6 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 481.0
BYD1_k127_601012_7 oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006243 367.0
BYD1_k127_601012_8 CBD_II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 365.0
BYD1_k127_601012_9 PFAM ADP-ribosylation Crystallin J1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 347.0
BYD1_k127_6013497_0 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair - - - 0.0 1045.0
BYD1_k127_6013497_1 Phosphate transport regulator K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004281 260.0
BYD1_k127_6013497_2 PFAM phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000001294 216.0
BYD1_k127_6025524_0 CheA signal transduction histidine kinase K03407 - 2.7.13.3 6.246e-225 723.0
BYD1_k127_6025524_1 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 496.0
BYD1_k127_6025524_2 PFAM Glycosyl transferase, group 1 K02844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005944 353.0
BYD1_k127_6025524_3 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002751 286.0
BYD1_k127_6025524_4 Tetratricopeptide TPR_1 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000005311 231.0
BYD1_k127_6025524_5 phosphorelay signal transduction system - - - 0.000000000000000000000001984 107.0
BYD1_k127_6025524_6 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000003626 76.0
BYD1_k127_6063458_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000002322 217.0
BYD1_k127_6063458_1 PFAM Uncharacterised protein family (UPF0153) - - - 0.000000000000000000000000000000000000000000000000000000000001976 216.0
BYD1_k127_6063458_2 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.000000000000000000000000000000000000000000000000131 187.0
BYD1_k127_6063458_3 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.0000000000000000000000000000000000000000000000003047 182.0
BYD1_k127_6063458_4 - - - - 0.00000000000000000000000006229 113.0
BYD1_k127_6063458_5 Protein of unknown function, DUF255 K06888 - - 0.0000000000000000000008915 94.0
BYD1_k127_607318_0 Belongs to the DegT DnrJ EryC1 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 472.0
BYD1_k127_607318_1 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003928 455.0
BYD1_k127_607318_11 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000007665 81.0
BYD1_k127_607318_2 PFAM Nucleoside recognition - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008346 367.0
BYD1_k127_607318_3 SH3 domain (SH3b1 type) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001616 369.0
BYD1_k127_607318_4 PFAM Glycosyl transferase family 2 K10012 - 2.4.2.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 347.0
BYD1_k127_607318_5 PFAM YdjC family protein K03478 - 3.5.1.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000572 313.0
BYD1_k127_607318_6 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007526 293.0
BYD1_k127_607318_7 Transferase hexapeptide repeat containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000001876 235.0
BYD1_k127_607318_8 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000001652 226.0
BYD1_k127_607318_9 Belongs to the N-Me-Phe pilin family K02650 - - 0.00000000000002779 77.0
BYD1_k127_6110060_0 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 467.0
BYD1_k127_6110060_1 Tetratricopeptide repeat K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007474 343.0
BYD1_k127_6152631_0 Heat shock 70 kDa protein K04043 - - 0.0 1048.0
BYD1_k127_6152631_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 1.648e-287 897.0
BYD1_k127_6152631_10 Pfam:DUF2029 - - - 0.0000000000000000000000000000000000000000000000000000000000000009675 233.0
BYD1_k127_6152631_11 Peptidoglycan-binding domain 1 protein - - - 0.00000000000000000000000000000000000000000000000000000000008219 225.0
BYD1_k127_6152631_12 Protein of unknown function (DUF1638) - - - 0.0000000000000000000000000000000000000000000000000000000008674 207.0
BYD1_k127_6152631_13 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0044424,GO:0044444,GO:0044464,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - 0.00000000000000000000000000000000000000000000001164 178.0
BYD1_k127_6152631_14 Haemolysin-type calcium-binding repeat (2 copies) K01406 - 3.4.24.40 0.000000001055 71.0
BYD1_k127_6152631_15 - - - - 0.000703 42.0
BYD1_k127_6152631_2 PFAM ABC transporter related K06158 - - 1.85e-206 663.0
BYD1_k127_6152631_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 504.0
BYD1_k127_6152631_4 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 401.0
BYD1_k127_6152631_5 PFAM PSP1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 379.0
BYD1_k127_6152631_6 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002648 355.0
BYD1_k127_6152631_7 PFAM Rhomboid family protein K07059 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006871 263.0
BYD1_k127_6152631_8 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000812 259.0
BYD1_k127_6152631_9 B12 binding domain K00548 - 2.1.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000001118 252.0
BYD1_k127_6178493_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 369.0
BYD1_k127_6178493_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008099 279.0
BYD1_k127_6178493_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000004474 166.0
BYD1_k127_6178915_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 542.0
BYD1_k127_6178915_1 Phosphonopyruvate decarboxylase-related protein K15635 - 5.4.2.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004545 519.0
BYD1_k127_6178915_2 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 323.0
BYD1_k127_6178915_3 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.00000000000000000000000000000000000000000000000000000000000001841 221.0
BYD1_k127_6178915_4 PFAM thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000000000000002721 177.0
BYD1_k127_6178915_5 PFAM Cytochrome c-type biogenesis protein CcmB K02194 - - 0.000000000000000000000000000000000000005848 148.0
BYD1_k127_6178915_6 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000003804 105.0
BYD1_k127_6201331_0 repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005464 263.0
BYD1_k127_6201331_1 Phosphotransferase enzyme family - - - 0.0000000000000134 76.0
BYD1_k127_6224703_0 PFAM AMP-dependent synthetase K01912 - 6.2.1.30 1.227e-253 785.0
BYD1_k127_6224703_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.285e-196 625.0
BYD1_k127_6224703_10 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000175 138.0
BYD1_k127_6224703_11 Domain present in PSD-95, Dlg, and ZO-1/2. K02452 - - 0.000000000000000000000000002951 122.0
BYD1_k127_6224703_12 PFAM Metallophosphoesterase K07096 - - 0.00000000000000000000000001963 110.0
BYD1_k127_6224703_13 CAAX protease self-immunity K07052 - - 0.0000000000000000000000119 107.0
BYD1_k127_6224703_14 smart pdz dhr glgf - - - 0.0000000000000000004672 91.0
BYD1_k127_6224703_15 TM2 domain - - - 0.00000001645 60.0
BYD1_k127_6224703_2 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 536.0
BYD1_k127_6224703_3 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000041 325.0
BYD1_k127_6224703_4 Diguanylate cyclase, GGDEF domain K18444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000024 338.0
BYD1_k127_6224703_5 response regulator, receiver K07315 - 3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003589 317.0
BYD1_k127_6224703_6 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008033 263.0
BYD1_k127_6224703_7 TIGRFAM DNA protecting protein DprA K04096 - - 0.00000000000000000000000000000000000000000000000000000000001904 212.0
BYD1_k127_6224703_8 smart pdz dhr glgf - - - 0.000000000000000000000000000000000000000000000000000000101 205.0
BYD1_k127_6224703_9 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000589 195.0
BYD1_k127_6243608_0 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005614 481.0
BYD1_k127_6243608_1 PFAM ABC-2 type transporter K09690 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 388.0
BYD1_k127_6243608_2 outer membrane efflux protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009232 368.0
BYD1_k127_6243608_3 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000004211 196.0
BYD1_k127_6243608_4 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000004673 160.0
BYD1_k127_6243608_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000006979 152.0
BYD1_k127_6243608_6 Redoxin K03386 - 1.11.1.15 0.00000000000000000000000000648 110.0
BYD1_k127_6243608_7 - - - - 0.0000000005957 71.0
BYD1_k127_628203_0 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.623e-199 629.0
BYD1_k127_628203_1 PFAM CBS domain containing protein K04767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007304 284.0
BYD1_k127_628203_2 PFAM methyltransferase small - - - 0.00000000000000000000000000000000000000000000000000000000000000000003995 241.0
BYD1_k127_628203_3 CI repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000007831 235.0
BYD1_k127_628203_4 CI repressor - - - 0.00000000000000000000000000000000000000000000291 172.0
BYD1_k127_628203_5 repeat-containing protein K09136 - - 0.0000000000000000000000000000000000000001364 152.0
BYD1_k127_628203_6 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.0000000000000000000000000000000000001179 147.0
BYD1_k127_628203_7 PFAM nitrogen-fixing NifU domain protein - - - 0.00000000000000000000000000002383 118.0
BYD1_k127_628203_8 Metal-sensitive transcriptional repressor K21600 - - 0.00000000000000000000002505 102.0
BYD1_k127_630712_0 ABC-type branched-chain amino acid transport K07121 - - 0.0000000000000000000000000000000000000000000000000000000000000001239 241.0
BYD1_k127_630712_1 ATP hydrolysis coupled proton transport - - - 0.00000000000000000000000000008395 132.0
BYD1_k127_630712_2 PFAM Glycosyl transferase family 2 K07011 - - 0.000000000000000001282 91.0
BYD1_k127_630712_3 ABC-type branched-chain amino acid transport K07121 - - 0.00001881 53.0
BYD1_k127_6309019_0 SMART Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 3.847e-228 728.0
BYD1_k127_6309019_1 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007946 508.0
BYD1_k127_6309019_2 ABC transporter transmembrane region K12541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006179 422.0
BYD1_k127_6309019_3 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 415.0
BYD1_k127_6309019_4 Type I secretion membrane fusion protein, HlyD K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009908 406.0
BYD1_k127_6309019_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002605 359.0
BYD1_k127_6309019_6 type I secretion outer membrane protein, TolC K12543 - - 0.00000000000000000000000000000000000000002747 161.0
BYD1_k127_6393226_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 1.072e-194 615.0
BYD1_k127_6393226_1 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 443.0
BYD1_k127_6393226_2 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 428.0
BYD1_k127_6393226_3 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006384 400.0
BYD1_k127_6393226_4 PFAM Short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 320.0
BYD1_k127_6393226_5 AAA domain, putative AbiEii toxin, Type IV TA system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001484 318.0
BYD1_k127_6393226_6 Uncharacterized ACR, COG1399 K07040 - - 0.00000000000000000000000000000001075 133.0
BYD1_k127_6393226_7 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.00000000000000000000000000003117 118.0
BYD1_k127_6393226_8 Belongs to the bacterial ribosomal protein bL32 family K02911 GO:0003674,GO:0003735,GO:0005198 - 0.0000000000000000001393 89.0
BYD1_k127_6398004_0 Signal transduction histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 512.0
BYD1_k127_6398004_1 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611,K09065 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.3,2.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 419.0
BYD1_k127_6398004_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 372.0
BYD1_k127_6398004_3 Uncharacterised conserved protein (DUF2156) K01163 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001684 307.0
BYD1_k127_6398004_4 PFAM Sporulation stage II, protein E C-terminal K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000002765 183.0
BYD1_k127_6400523_0 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 5.054e-209 656.0
BYD1_k127_6400523_1 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003412 548.0
BYD1_k127_6400523_2 DRTGG domain protein K06873 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 501.0
BYD1_k127_6400523_3 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004969 449.0
BYD1_k127_6400523_4 SMART Elongator protein 3 MiaB NifB K18707 - 2.8.4.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001263 402.0
BYD1_k127_6400523_5 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000005394 261.0
BYD1_k127_6400523_6 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000002917 198.0
BYD1_k127_6400523_7 cheY-homologous receiver domain K03413 - - 0.000000000000000000000000000001418 125.0
BYD1_k127_6400523_8 - - - - 0.000000000000005737 79.0
BYD1_k127_6400523_9 FlaG protein K06603 - - 0.00001781 51.0
BYD1_k127_6413433_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002289 423.0
BYD1_k127_6413433_1 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000001861 216.0
BYD1_k127_6413433_2 PFAM single-strand binding protein Primosomal replication protein n K03111 - - 0.00000000000000000000000000000000000000000000000001475 182.0
BYD1_k127_6448870_0 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009098 548.0
BYD1_k127_6448870_1 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 410.0
BYD1_k127_6448870_2 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001337 280.0
BYD1_k127_6448870_3 TIGRFAM cobalt ABC transporter, inner membrane subunit CbiQ K02008 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009663 254.0
BYD1_k127_6448870_4 response regulator, receiver - - - 0.0000000000000000000000000000000000914 136.0
BYD1_k127_6448870_5 ABC transporter K02006 - - 0.00000000000000000000000000891 115.0
BYD1_k127_6473513_0 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 515.0
BYD1_k127_6473513_1 TIGRFAM Tyrosine recombinase XerD K03733,K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 411.0
BYD1_k127_6473513_2 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535,K13599 - 3.5.1.108 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003784 359.0
BYD1_k127_6473513_3 PFAM Rubrerythrin - GO:0003674,GO:0005488,GO:0005506,GO:0043167,GO:0043169,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005418 313.0
BYD1_k127_6473513_4 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000387 234.0
BYD1_k127_6473513_5 Belongs to the rubredoxin family - GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006091,GO:0008150,GO:0008152,GO:0008199,GO:0009055,GO:0009987,GO:0016491,GO:0022900,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0055114 - 0.00000000000000000000000000000000000000000000000000002686 194.0
BYD1_k127_6473513_6 Pilus assembly protein - - - 0.00000000006833 74.0
BYD1_k127_6503851_0 PFAM AAA ATPase central domain protein K07478 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004462 476.0
BYD1_k127_6503851_1 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 287.0
BYD1_k127_6503851_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.0000000000000000000000000000000000000000000000000000000000001178 215.0
BYD1_k127_6510830_0 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007513 394.0
BYD1_k127_6510830_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000403 287.0
BYD1_k127_6515865_0 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007044 421.0
BYD1_k127_6515865_1 TIGRFAM Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008019 357.0
BYD1_k127_6515865_2 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000003136 248.0
BYD1_k127_6515865_3 - - - - 0.00000000000000000000000000000000000000000000002102 178.0
BYD1_k127_6516039_0 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 531.0
BYD1_k127_6516039_1 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002527 477.0
BYD1_k127_6516039_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000003082 219.0
BYD1_k127_6552248_0 PFAM aconitate hydratase K01681 - 4.2.1.3 1.355e-308 955.0
BYD1_k127_6552248_1 PFAM PpiC-type peptidyl-prolyl cis-trans isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004665 475.0
BYD1_k127_6552248_2 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002279 397.0
BYD1_k127_6552248_3 PFAM CBS domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009062 355.0
BYD1_k127_6552248_4 PFAM cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005708 304.0
BYD1_k127_6552248_5 cellular component organization or biogenesis K00800 - 2.5.1.19 0.0000000001615 65.0
BYD1_k127_6552248_6 - - - - 0.00001315 51.0
BYD1_k127_6588474_0 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 323.0
BYD1_k127_6588474_1 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 295.0
BYD1_k127_6588474_2 PFAM ATP-binding region ATPase domain protein K10819 - 2.7.13.3 0.00000000000000000000000000531 110.0
BYD1_k127_6699739_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003123 527.0
BYD1_k127_6699739_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008423 488.0
BYD1_k127_6699739_2 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008118 464.0
BYD1_k127_6699739_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 331.0
BYD1_k127_6699739_4 Putative exonuclease, RdgC - - - 0.00000000000000000000000000000000000000000000000000000000000000569 222.0
BYD1_k127_6699739_5 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000000000000000000008814 116.0
BYD1_k127_6699739_6 PFAM permease YjgP YjgQ family protein K11720 - - 0.000000000006779 67.0
BYD1_k127_6708588_0 two component, sigma54 specific, transcriptional regulator, Fis family K02481,K07712 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 417.0
BYD1_k127_6708588_1 DNA recombination-mediator protein A K04096 - - 0.00000000000000000000000000000000000000000000000653 181.0
BYD1_k127_6718642_0 PFAM Glycosyl transferase family 4 K02851 - 2.7.8.33,2.7.8.35 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 495.0
BYD1_k127_6718642_1 Carboxylesterase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 467.0
BYD1_k127_6718642_2 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009438 376.0
BYD1_k127_6718642_3 NADPH-dependent FMN reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008544 285.0
BYD1_k127_6718642_4 Glycosyl hydrolase-like 10 - - - 0.00000000000000000000000000000000000000000001631 178.0
BYD1_k127_6718642_5 Belongs to the CinA family K03742,K03743 - 3.5.1.42 0.00000000000000000000000000000000000001111 164.0
BYD1_k127_6718642_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000008437 90.0
BYD1_k127_6725235_0 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004845 552.0
BYD1_k127_6725235_1 PFAM glycosyl transferase family 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001076 247.0
BYD1_k127_6725235_2 NMT1-like family K02051,K15551 - - 0.00000000000000000000000008787 109.0
BYD1_k127_6733249_0 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 522.0
BYD1_k127_6733249_1 Pentapeptide repeats (9 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 406.0
BYD1_k127_6733249_2 cluster binding protein K18929 - - 0.0000000000000000000000000000000000000000005212 162.0
BYD1_k127_6733249_3 Domain of unknown function (DUF4150) - - - 0.0000000000000000000000000000000001493 136.0
BYD1_k127_6733249_4 LUD domain K00782 - - 0.00000000000000000000001296 109.0
BYD1_k127_6733249_5 Protein of unknown function (DUF3540) - - - 0.00000000000000000001414 101.0
BYD1_k127_6733249_6 transferase activity, transferring glycosyl groups K20444 - - 0.0000000000000000005403 101.0
BYD1_k127_6733249_7 rhs element vgr protein K11904 - - 0.0000000003762 72.0
BYD1_k127_6733249_8 Pentapeptide repeats (9 copies) - - - 0.00000001603 66.0
BYD1_k127_6733249_9 rhs element vgr protein K11904 - - 0.0000314 48.0
BYD1_k127_6760419_0 NAD(P)H-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 579.0
BYD1_k127_6760419_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012,K00066,K02472,K02474,K13015 - 1.1.1.132,1.1.1.136,1.1.1.22,1.1.1.336 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 511.0
BYD1_k127_6760419_2 Glycosyltransferase like family K20444 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000209 422.0
BYD1_k127_6760419_3 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001755 317.0
BYD1_k127_6760419_4 Glycosyltransferase like family 2 K20444 - - 0.0000000000000000000000000000000000000000000000000000000000001237 218.0
BYD1_k127_6760419_5 - - - - 0.000000000000000000000000000000001089 147.0
BYD1_k127_6760419_6 ATP hydrolysis coupled proton transport - - - 0.00000302 56.0
BYD1_k127_6819769_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1292.0
BYD1_k127_6819769_1 Protein of unknown function DUF262 - - - 4.904e-210 667.0
BYD1_k127_6819769_10 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 GO:0001680,GO:0003674,GO:0003824,GO:0004652,GO:0004810,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016437,GO:0016740,GO:0016772,GO:0016779,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042245,GO:0042780,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0046483,GO:0070566,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1990817 2.7.7.72 0.00004129 48.0
BYD1_k127_6819769_2 PFAM UvrD REP helicase K03657 - 3.6.4.12 4.317e-207 664.0
BYD1_k127_6819769_3 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003726 490.0
BYD1_k127_6819769_4 Vacuole effluxer Atg22 like K06902 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 439.0
BYD1_k127_6819769_5 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 425.0
BYD1_k127_6819769_6 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008822 312.0
BYD1_k127_6819769_7 Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA K00556 - 2.1.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000001269 261.0
BYD1_k127_6819769_8 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000005046 233.0
BYD1_k127_6819769_9 Acyl-ACP thioesterase K01071 - 3.1.2.21 0.000000000000000000000000000000000003201 147.0
BYD1_k127_684455_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 2.117e-249 781.0
BYD1_k127_684455_1 PUA-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003359 273.0
BYD1_k127_684455_2 SMART Transcription regulator, AsnC-type K03718,K03719 - - 0.0000000000000000000000000000000000000000000000000002929 188.0
BYD1_k127_684455_3 adenylylsulfate kinase activity K00860,K00955 GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25,2.7.7.4 0.000000000000000000000000000000000000000000000000004271 186.0
BYD1_k127_684455_4 TIGRFAM MJ0042 family finger-like protein - - - 0.00000000000000000000000000000000000001545 158.0
BYD1_k127_684455_5 - - - - 0.000000000001271 72.0
BYD1_k127_6903692_0 DNA restriction-modification system K01153,K01154 - 3.1.21.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 549.0
BYD1_k127_6903692_1 PFAM UMUC domain protein DNA-repair protein K02346,K03502 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 441.0
BYD1_k127_6903692_2 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 417.0
BYD1_k127_6903692_3 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001754 337.0
BYD1_k127_6903692_4 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005335 275.0
BYD1_k127_6903692_5 PFAM Pyruvate ketoisovalerate oxidoreductase K00177 - 1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000008013 256.0
BYD1_k127_692936_0 TIGRFAM Diguanylate cyclase - - - 1.051e-231 743.0
BYD1_k127_692936_1 Histidine kinase K02030 - - 0.00000000000000000000000000000001172 131.0
BYD1_k127_6966063_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - 9.096e-297 923.0
BYD1_k127_6966063_1 SMART PAS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 634.0
BYD1_k127_6966063_2 AMP-binding enzyme K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002185 527.0
BYD1_k127_6966063_3 PFAM UspA - - - 0.00000000000000000000000000000003565 136.0
BYD1_k127_6983017_0 PFAM Multi antimicrobial extrusion protein MatE K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 369.0
BYD1_k127_6983017_1 TPR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000798 233.0
BYD1_k127_6983017_2 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000002724 121.0
BYD1_k127_6983017_3 - - - - 0.0000000000000000000000001716 112.0
BYD1_k127_6983017_4 PFAM acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000007006 103.0
BYD1_k127_6983017_5 Belongs to the anti-sigma-factor antagonist family K04749 - - 0.00000000005743 69.0
BYD1_k127_7009580_0 elongation factor SelB, winged helix K03833 - - 6.154e-271 847.0
BYD1_k127_7009580_1 Domain of unknown function (DUF4445) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000724 580.0
BYD1_k127_7009580_2 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006188 429.0
BYD1_k127_7009580_3 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 349.0
BYD1_k127_7009580_4 Signal transducing histidine kinase, homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006996 356.0
BYD1_k127_7009580_5 - - - - 0.0000000000000000000000000000000000000000000000000000000004677 209.0
BYD1_k127_7009580_6 LysM domain - - - 0.000000000000000000000000000000000000000000000000000007091 201.0
BYD1_k127_7009580_7 self proteolysis K07156 - - 0.000000000000000000000000000000000006436 153.0
BYD1_k127_7009580_8 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000009885 81.0
BYD1_k127_7038787_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 626.0
BYD1_k127_7038787_1 histidine kinase HAMP region domain protein K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003691 581.0
BYD1_k127_7038787_2 PFAM CheW domain protein K03408 - - 0.00000000000000000000000000000000000000005144 158.0
BYD1_k127_7038787_3 Glycosyltransferase like family - - - 0.0000000000003103 79.0
BYD1_k127_7066774_0 Acyl-CoA synthetase (NDP forming) K09181 GO:0003674,GO:0003824,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006950,GO:0006979,GO:0008080,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022607,GO:0032459,GO:0032462,GO:0034212,GO:0036211,GO:0043170,GO:0043254,GO:0043412,GO:0043543,GO:0043933,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0052858,GO:0061733,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:1901564 - 4.068e-224 711.0
BYD1_k127_7066774_1 flavodoxin nitric oxide synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006791 513.0
BYD1_k127_7066774_2 PFAM PhoH family protein K06217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 434.0
BYD1_k127_7066774_3 Phosphoadenosine phosphosulfate reductase K00390,K00957 - 1.8.4.10,1.8.4.8,2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000004668 265.0
BYD1_k127_7066774_4 SMART Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000003767 237.0
BYD1_k127_7066774_5 TIGRFAM siroheme synthase K02304 - 1.3.1.76,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000001032 212.0
BYD1_k127_7066774_6 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000009114 155.0
BYD1_k127_7066774_7 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.00000000000000000000000000000000000002087 151.0
BYD1_k127_7066774_8 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000001166 113.0
BYD1_k127_7066774_9 PQ loop repeat K15383 - - 0.00000000000000000001768 93.0
BYD1_k127_7100767_0 MlaD protein K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 535.0
BYD1_k127_7100767_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 486.0
BYD1_k127_7100767_2 PFAM ABC transporter related K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 361.0
BYD1_k127_7100767_3 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.0000000000000000000000000000000000000000000000000000002395 212.0
BYD1_k127_7100767_4 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000001956 206.0
BYD1_k127_7100767_5 protein conserved in bacteria (DUF2064) K09931 - - 0.0000000000000000000000000000000000000007049 157.0
BYD1_k127_7100767_6 PFAM Adenylate cyclase K05873 - 4.6.1.1 0.00000000000000000000000000000000003412 139.0
BYD1_k127_7100767_7 rRNA methylase K06442 - 2.1.1.226,2.1.1.227 0.0000001106 56.0
BYD1_k127_7155271_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003761 550.0
BYD1_k127_7155271_1 domain, Protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009531 517.0
BYD1_k127_7155271_10 PFAM 4Fe-4S ferredoxin - - - 0.00000000000000000000000000000000002932 134.0
BYD1_k127_7155271_11 Glycosyl transferase 4-like - - - 0.0000000000000000000000004564 118.0
BYD1_k127_7155271_12 PFAM Late competence development protein ComFB - - - 0.000000000000000001125 91.0
BYD1_k127_7155271_2 NMT1-like family K02051,K15551 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 292.0
BYD1_k127_7155271_3 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004737 252.0
BYD1_k127_7155271_4 SMART Tetratricopeptide - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002513 243.0
BYD1_k127_7155271_5 PFAM SNARE associated Golgi protein - - - 0.00000000000000000000000000000000000000000000001595 179.0
BYD1_k127_7155271_6 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000001289 174.0
BYD1_k127_7155271_7 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000007273 159.0
BYD1_k127_7155271_8 Domain of unknown function (DUF4412) - - - 0.00000000000000000000000000000000000004534 150.0
BYD1_k127_7155271_9 - - - - 0.0000000000000000000000000000000000001805 144.0
BYD1_k127_7168156_0 ABC transporter, transmembrane region K06147,K11085 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005123 565.0
BYD1_k127_7168156_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 417.0
BYD1_k127_7168156_2 PFAM Extracellular solute-binding protein, family 3 K02030 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 363.0
BYD1_k127_7168156_3 pfam abc K02028 - 3.6.3.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 359.0
BYD1_k127_7168156_4 Binding-protein-dependent transport system inner membrane component K02029 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 310.0
BYD1_k127_7168156_5 PFAM binding-protein-dependent transport systems inner membrane component K02029 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005442 310.0
BYD1_k127_7168156_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K08744 - 2.7.8.41 0.00000000000000000000000000000000000000000000001705 175.0
BYD1_k127_7200402_0 Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O K05601 - 1.7.99.1 5.926e-269 835.0
BYD1_k127_7200402_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 8.963e-252 788.0
BYD1_k127_7200402_10 - - - - 0.00000000000000003888 91.0
BYD1_k127_7200402_11 - - - - 0.000000000000001477 83.0
BYD1_k127_7200402_2 PFAM type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008762 455.0
BYD1_k127_7200402_3 protein histidine kinase activity K20974 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009984 384.0
BYD1_k127_7200402_4 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007727 317.0
BYD1_k127_7200402_5 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002595 278.0
BYD1_k127_7200402_6 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 GO:0003674,GO:0003824,GO:0004595,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000014 241.0
BYD1_k127_7200402_7 TIGRFAM methyltransferase K08316 - 2.1.1.171 0.0000000000000000000000000000000000000000000000000000000001121 212.0
BYD1_k127_7200402_8 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K02170 - 3.1.1.85 0.0000000000000000000000000000000008143 138.0
BYD1_k127_7200402_9 Methyltransferase domain K01935,K02169 - 2.1.1.197,6.3.3.3 0.000000000000000000000000000000004503 141.0
BYD1_k127_7209158_0 Nitrogenase molybdenum-iron protein alpha chain K02586 - 1.18.6.1 5.841e-255 795.0
BYD1_k127_7209158_1 Belongs to the NifD NifK NifE NifN family K02587 - - 3.167e-236 737.0
BYD1_k127_7209158_2 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 1.953e-214 673.0
BYD1_k127_7209158_3 Belongs to the NifD NifK NifE NifN family K02592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006191 591.0
BYD1_k127_7209158_4 SMART Elongator protein 3 MiaB NifB K02585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 532.0
BYD1_k127_7209158_5 The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components the iron protein and the molybdenum-iron protein K02588 - 1.18.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 489.0
BYD1_k127_7209158_6 Belongs to the P(II) protein family K02590 - - 0.0000000000000000000000000000000000000000000000006621 182.0
BYD1_k127_7209158_7 Belongs to the P(II) protein family K02589 - - 0.00000000000000000000000000000000000000000000004701 171.0
BYD1_k127_7209158_8 Ferredoxin - - - 0.0000000000000000000000000000000000004263 146.0
BYD1_k127_7209158_9 Belongs to the alpha-IPM synthase homocitrate synthase family K01649,K02594 - 2.3.3.13,2.3.3.14 0.00000000000000000000000000004054 123.0
BYD1_k127_7307109_0 Peptidase M16C associated K06972 - - 2.307e-274 863.0
BYD1_k127_7307109_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002411 591.0
BYD1_k127_7307109_2 Cache_2 K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005148 402.0
BYD1_k127_7307109_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 347.0
BYD1_k127_7307109_4 TIGRFAM geranylgeranyl reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000001005 242.0
BYD1_k127_7307109_5 PFAM DnaJ homologue, subfamily C, member 28 - - - 0.00000000000000000000000000000000000005073 146.0
BYD1_k127_7322843_0 Type VI secretion protein, EvpB/VC_A0108, tail sheath K11900 - - 1.652e-248 773.0
BYD1_k127_7322843_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 356.0
BYD1_k127_7322843_2 ImpA, N-terminal, type VI secretion system K11910 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 315.0
BYD1_k127_7322843_3 acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004959 266.0
BYD1_k127_7322843_4 Type VI secretion system, VipA, VC_A0107 or Hcp2 K11901 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007821 240.0
BYD1_k127_7322843_5 Type VI secretion system effector, Hcp K11903 - - 0.000000000000000000000000000000000000000000000002721 177.0
BYD1_k127_7322843_6 Gene 25-like lysozyme K11905 - - 0.000000000000000000000000000000000004536 141.0
BYD1_k127_7322843_7 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000000003507 132.0
BYD1_k127_7322843_8 Glycosyl transferase, family 2 - - - 0.000000000000000000000000006836 121.0
BYD1_k127_7325322_0 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 304.0
BYD1_k127_7325322_1 Clostripain family - - - 0.000000000000000000000000000000000000000000000000000000000000002662 240.0
BYD1_k127_7325322_2 - - - - 0.0000000000000000000000000000000000009808 147.0
BYD1_k127_7325322_3 Protein tyrosine kinase - - - 0.000000000000002728 78.0
BYD1_k127_7325322_4 4Fe-4S dicluster domain K16887 - - 0.0000000000006459 68.0
BYD1_k127_7456553_0 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 6.045e-199 625.0
BYD1_k127_7456553_1 phosphorelay signal transduction system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005626 405.0
BYD1_k127_7456553_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003299 372.0
BYD1_k127_7456553_3 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 317.0
BYD1_k127_7456553_4 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 0.000000000000000000000000000000000000000000000000000000000000000000000001191 248.0
BYD1_k127_7456553_5 PFAM CMP dCMP deaminase zinc-binding K01493 - 3.5.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000004624 246.0
BYD1_k127_7456553_6 PFAM Class II Aldolase K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000004084 160.0
BYD1_k127_7456553_7 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000007984 161.0
BYD1_k127_7493957_0 PFAM Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001148 284.0
BYD1_k127_7493957_1 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 - 6.3.3.2 0.00000000000000000000000000000000000000000000000000005254 192.0
BYD1_k127_7493957_2 PFAM glycoside hydrolase family 3 K01207 - 3.2.1.52 0.000000000000000000000000000000042 132.0
BYD1_k127_7493957_3 PFAM Metallophosphoesterase K07096 - - 0.0000000000000000000000001009 109.0
BYD1_k127_7494987_0 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000002139 218.0
BYD1_k127_7494987_1 PFAM Pentapeptide repeats (8 copies) - - - 0.000000000000000000000000000001708 135.0
BYD1_k127_7494987_2 Domain of unknown function (DUF4150) - - - 0.00000000000000000000005095 103.0
BYD1_k127_7494987_3 pentapeptide repeat protein - - - 0.0000000000002078 83.0
BYD1_k127_7506616_0 PFAM Peptidase M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006979 349.0
BYD1_k127_7506616_1 PP-loop domain protein K14058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 313.0
BYD1_k127_7506616_2 Flagellar hook protein FlgE K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001731 298.0
BYD1_k127_7506616_3 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005828 291.0
BYD1_k127_7506616_4 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000002905 222.0
BYD1_k127_7549055_0 PFAM Radical SAM domain protein K03716 - 4.1.99.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001649 388.0
BYD1_k127_7549055_1 DNA binding K03497 - - 0.000000000000000000000000000000000000000000000000001733 194.0
BYD1_k127_7551469_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 3.155e-221 700.0
BYD1_k127_7551469_1 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 354.0
BYD1_k127_7551469_2 Probable RNA and SrmB- binding site of polymerase A K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 323.0
BYD1_k127_7551469_3 cobalamin binding - - - 0.0000000000000000000000000000000000001174 148.0
BYD1_k127_7551469_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000001875 118.0
BYD1_k127_7551469_5 Cobalamin B12-binding domain protein - - - 0.0000000000004818 70.0
BYD1_k127_7551469_6 PFAM transposase YhgA family protein - - - 0.0000000006271 65.0
BYD1_k127_7573990_0 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006722 569.0
BYD1_k127_7573990_1 flagellar motor switch protein FliG K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 500.0
BYD1_k127_7573990_2 PFAM MGS domain protein K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007352 269.0
BYD1_k127_7573990_3 PFAM TPR repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007827 264.0
BYD1_k127_7573990_4 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008812 252.0
BYD1_k127_7573990_5 Belongs to the flagella basal body rod proteins family K02388 - - 0.000000000000000000000000000000000000000000000000000000000001162 212.0
BYD1_k127_7573990_6 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000003561 148.0
BYD1_k127_7573990_7 PFAM flagellar hook-basal body complex protein FliE K02408 - - 0.000000000000000000000003112 105.0
BYD1_k127_7573990_8 PFAM Flagellar assembly protein FliH Type III secretion system HrpE K02411 - - 0.000005617 53.0
BYD1_k127_7576930_0 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 317.0
BYD1_k127_7576930_1 Glycosyl transferase family 41 - - - 0.0000000000000000000000000002198 125.0
BYD1_k127_7576930_2 Belongs to the Orn Lys Arg decarboxylase class-II family K01586 - 4.1.1.20 0.00000000000008652 78.0
BYD1_k127_7632259_0 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000001301 203.0
BYD1_k127_7632259_1 - - - - 0.00000000000000000000000003291 115.0
BYD1_k127_7632259_2 - - - - 0.000000000002483 76.0
BYD1_k127_7632259_3 - - - - 0.00000002314 57.0
BYD1_k127_7651633_0 His Kinase A (phosphoacceptor - - - 1.195e-203 674.0
BYD1_k127_7651633_1 PFAM SufBD protein K07033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 591.0
BYD1_k127_7651633_10 COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain K07814 - - 0.000000000000000000000000000000007929 131.0
BYD1_k127_7651633_11 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000008569 104.0
BYD1_k127_7651633_12 Bacteriophage replication gene A protein (GPA) - - - 0.000003296 50.0
BYD1_k127_7651633_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 463.0
BYD1_k127_7651633_3 PFAM ABC transporter related K09013 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005559 407.0
BYD1_k127_7651633_4 TIGRFAM Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003607 376.0
BYD1_k127_7651633_5 NMT1/THI5 like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000691 342.0
BYD1_k127_7651633_6 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002917 275.0
BYD1_k127_7651633_7 PFAM periplasmic solute binding protein K09815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001265 273.0
BYD1_k127_7651633_8 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000005031 242.0
BYD1_k127_7651633_9 - - - - 0.000000000000000000000000000000001222 144.0
BYD1_k127_7653836_0 glycosyl transferase family 2 K20444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 365.0
BYD1_k127_7653836_1 Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A K02188 - 2.1.1.195 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 302.0
BYD1_k127_7653836_2 response regulator, receiver K03413 - - 0.0000000000000000000000000000000000000000000005919 169.0
BYD1_k127_7653836_3 TM2 domain - - - 0.000000000000000000000000000000771 126.0
BYD1_k127_7653836_4 Protein of unknown function (DUF2752) - - - 0.00000000007369 67.0
BYD1_k127_7720924_0 Uncharacterised protein family UPF0052 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 467.0
BYD1_k127_7720924_1 Phosphate uptake regulator, PhoU - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 396.0
BYD1_k127_7720924_2 HPr kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008867 359.0
BYD1_k127_7720924_3 PFAM RimK domain protein ATP-grasp K05844 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000974 342.0
BYD1_k127_7720924_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000001745 188.0
BYD1_k127_7750746_0 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005496 326.0
BYD1_k127_7750746_1 - - - - 0.000000001652 62.0
BYD1_k127_7750746_2 Pfam:DUF342 K09749 - - 0.0000004369 60.0
BYD1_k127_7754699_0 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 394.0
BYD1_k127_7754699_1 Type II and III secretion system protein K02666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006939 404.0
BYD1_k127_7754699_2 TIGRFAM type IV pilus assembly protein PilM K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 336.0
BYD1_k127_7754699_3 ATPase, P-type (transporting), HAD superfamily, subfamily IC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002135 266.0
BYD1_k127_7754699_4 Universal stress protein K06149 - - 0.000000000000000000000000000000000000000000000000000000000000004817 220.0
BYD1_k127_7754699_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000562 178.0
BYD1_k127_7754699_6 PFAM Fimbrial assembly family protein K02663 - - 0.000000000000000000000000004089 119.0
BYD1_k127_7754699_7 carbon utilization K02664 - - 0.00000000000000000000000001779 120.0
BYD1_k127_7754699_9 Pilus assembly protein, PilP K02665 - - 0.000000000000002958 85.0
BYD1_k127_7777312_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.833e-231 724.0
BYD1_k127_7777312_1 PFAM NAD-dependent epimerase dehydratase K08678 - 4.1.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 580.0
BYD1_k127_7777312_2 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 482.0
BYD1_k127_7777312_3 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000001169 218.0
BYD1_k127_7777312_4 PFAM Lytic transglycosylase catalytic K08309 - - 0.0000000000000000000000000000000000000000000000000949 186.0
BYD1_k127_7777312_5 Thioesterase superfamily K02614 - - 0.00000000000000000000000000000001412 130.0
BYD1_k127_7777312_6 - - - - 0.000006327 51.0
BYD1_k127_7782265_0 PFAM UvrD REP helicase K03657 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000402 497.0
BYD1_k127_7782265_1 - - - - 0.000000005181 59.0
BYD1_k127_7794785_0 response regulator, receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003163 428.0
BYD1_k127_7794785_1 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 311.0
BYD1_k127_7794785_2 RTX toxins and related Ca2 binding proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004479 301.0
BYD1_k127_7794785_3 Peptidoglycan-binding domain 1 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000006144 240.0
BYD1_k127_7794785_4 PFAM Hemolysin-type calcium-binding region - - - 0.0000000000000000000000000000000000000000000000006125 201.0
BYD1_k127_7794785_5 serine-type peptidase activity K08676 - - 0.00002222 56.0
BYD1_k127_7872568_0 PFAM Pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 3.106e-195 614.0
BYD1_k127_7872568_1 PFAM Thiamine pyrophosphate K00175 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000707 414.0
BYD1_k127_7872568_2 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 354.0
BYD1_k127_7872568_3 Calcineurin-like phosphoesterase K07098 - - 0.000000000000000000000000000000000000000000000000000000000005471 222.0
BYD1_k127_7872568_4 Scavenger mRNA decapping enzyme C-term binding K02503 - - 0.000000000000000000000000000000000000000000000000000001436 194.0
BYD1_k127_7872568_5 endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000004087 154.0
BYD1_k127_7872568_6 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00176 - 1.2.7.3 0.00000000000000000000000000007631 118.0
BYD1_k127_7872568_7 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000008144 98.0
BYD1_k127_7969217_0 PFAM H transporting two-sector ATPase alpha beta subunit central region K02412 - 3.6.3.14 1.071e-204 645.0
BYD1_k127_7969217_1 PFAM sigma-54 factor interaction domain-containing protein K10943 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005079 577.0
BYD1_k127_7969217_2 PFAM Aminotransferase class I and II K11358 - 2.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 516.0
BYD1_k127_7969217_3 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 424.0
BYD1_k127_7969217_4 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009805 284.0
BYD1_k127_7969217_5 - - - - 0.00000000000000000000000000000007685 133.0
BYD1_k127_7969217_6 PFAM Flagellar assembly protein FliH Type III secretion system HrpE K02411 - - 0.00000000000000000000002263 103.0
BYD1_k127_7969217_7 - - - - 0.00000000000000001402 93.0
BYD1_k127_7969563_0 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 402.0
BYD1_k127_7969563_1 secretion protein, HlyD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000594 393.0
BYD1_k127_7969563_2 ATPases associated with a variety of cellular activities K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 294.0
BYD1_k127_7980403_0 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002169 391.0
BYD1_k127_7980403_1 transferase activity, transferring glycosyl groups K15521 - 2.4.1.250 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000008393 304.0
BYD1_k127_7980403_2 Chase2 domain K01768 - 4.6.1.1 0.000000000000000000000000000000000003009 154.0
BYD1_k127_798332_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K18138 - - 0.0 1184.0
BYD1_k127_798332_1 response regulator, receiver K07315 - 3.1.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 396.0
BYD1_k127_798332_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 314.0
BYD1_k127_798332_3 Signal transduction histidine kinase, nitrogen specific, NtrB K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003748 290.0
BYD1_k127_798332_4 Histidine kinase-like ATPase domain K04757 - 2.7.11.1 0.0000000000000000001053 93.0
BYD1_k127_798332_5 serine-type aminopeptidase activity - - - 0.00000000145 64.0
BYD1_k127_7984597_0 response regulator, receiver K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 337.0
BYD1_k127_7984597_1 Response regulator receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002435 291.0
BYD1_k127_7984597_2 coenzyme F420-1:gamma-L-glutamate ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002536 246.0
BYD1_k127_7984597_3 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.00000000000000000000000000000000000000000000000000000000001493 214.0
BYD1_k127_7984597_4 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000005041 133.0
BYD1_k127_8031010_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004878 557.0
BYD1_k127_8031010_1 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001573 399.0
BYD1_k127_8031010_2 Chemotaxis sensory transducer - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006244 345.0
BYD1_k127_8031010_3 response regulator, receiver K03413 - - 0.000000000000000000000000000000000000000000000000000000004463 200.0
BYD1_k127_8031010_4 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.00000000000000000000000000000000000000007945 155.0
BYD1_k127_8070682_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 1.672e-257 820.0
BYD1_k127_8070682_1 4Fe-4S dicluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 599.0
BYD1_k127_8070682_2 Belongs to the ALAD family K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 473.0
BYD1_k127_8070682_3 Transporter-associated region K03699 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007036 478.0
BYD1_k127_8070682_4 nitrate reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000004424 209.0
BYD1_k127_8070682_5 Class III cytochrome C family - - - 0.00000000000000000000002702 107.0
BYD1_k127_8070682_6 Glycosyl transferase 4-like K13004 - - 0.0001093 53.0
BYD1_k127_8070682_7 PFAM metal-dependent phosphohydrolase HD sub K06951 - - 0.0001951 44.0
BYD1_k127_8071_0 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004154 545.0
BYD1_k127_8071_1 PFAM ATP-binding region ATPase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004615 231.0
BYD1_k127_8071_2 PFAM CheW domain protein K03408 - - 0.000000000000000000000000000000000000000000000000000001722 195.0
BYD1_k127_8115021_0 Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP- dependent clade X sub-subfamily K00850 - 2.7.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 603.0
BYD1_k127_8115021_1 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009958 599.0
BYD1_k127_8115021_2 Mediates zinc uptake. May also transport other divalent cations K07238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 393.0
BYD1_k127_8115021_3 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001713 292.0
BYD1_k127_8115021_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000003347 231.0
BYD1_k127_8115021_5 TIR domain - - - 0.00000000000000000000000000000000000000000000001092 180.0
BYD1_k127_8115021_6 plasmid maintenance K03496 - - 0.0000000000000000000888 98.0
BYD1_k127_8154235_0 PFAM ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007951 574.0
BYD1_k127_8154235_1 PFAM Cyclic nucleotide-binding K10914 - - 0.000000000000000000000000000000000000000005868 157.0
BYD1_k127_8154235_3 - - - - 0.0000000004917 64.0
BYD1_k127_8158292_0 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005034 370.0
BYD1_k127_8158292_1 PFAM UBA THIF-type NAD FAD binding K03148 - 2.7.7.73 0.0000000000000000000000000000000000000000000000000000000000000006409 228.0
BYD1_k127_8158292_2 - - - - 0.0000000000000000000002349 104.0
BYD1_k127_8158292_3 PFAM ThiamineS - - - 0.00000000000000001406 84.0
BYD1_k127_8158716_0 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.613e-222 700.0
BYD1_k127_8158716_1 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009352 582.0
BYD1_k127_8158716_10 Necessary for formate dehydrogenase activity K02380 - - 0.0000000000000000000000000000000000000000000000000000000000000000001165 243.0
BYD1_k127_8158716_11 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003137 228.0
BYD1_k127_8158716_12 Belongs to the pseudouridine synthase RluA family K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000002679 229.0
BYD1_k127_8158716_13 PFAM Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000003493 224.0
BYD1_k127_8158716_14 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000004953 201.0
BYD1_k127_8158716_15 PFAM CBS domain containing protein - - - 0.00000000000000000000000000000000000000000000000000009511 190.0
BYD1_k127_8158716_16 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000000000012 190.0
BYD1_k127_8158716_17 - - - - 0.00000000000000000000000000000000000000000000000002513 183.0
BYD1_k127_8158716_18 Adenylate and Guanylate cyclase catalytic domain - - - 0.0000000000000000000000000000000000000000000008835 178.0
BYD1_k127_8158716_19 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000001011 172.0
BYD1_k127_8158716_2 histidine kinase HAMP region domain protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 592.0
BYD1_k127_8158716_20 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000003092 159.0
BYD1_k127_8158716_21 protein family UPF0079, ATPase K06925 - - 0.0000000000000000000000000000000001939 138.0
BYD1_k127_8158716_22 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000005953 66.0
BYD1_k127_8158716_3 Radical SAM domain protein K04069 - 1.97.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001869 470.0
BYD1_k127_8158716_4 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 450.0
BYD1_k127_8158716_5 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 440.0
BYD1_k127_8158716_6 AAA ATPase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009071 442.0
BYD1_k127_8158716_7 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 378.0
BYD1_k127_8158716_8 Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 326.0
BYD1_k127_8158716_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002579 290.0
BYD1_k127_8187845_0 PFAM permease YjgP YjgQ family protein K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 410.0
BYD1_k127_8187845_1 PFAM permease YjgP YjgQ family protein K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002553 302.0
BYD1_k127_8187845_2 PFAM Metal-dependent phosphohydrolase, HD K06951 - - 0.0000000000000000000000000000000000000000000000000009009 186.0
BYD1_k127_8187845_3 - - - - 0.00000000000001639 74.0
BYD1_k127_8213333_0 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008498 565.0
BYD1_k127_8213333_1 histidine kinase A domain protein - - - 0.00000000000000000000000001039 116.0
BYD1_k127_8367692_0 PFAM UTP--glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 611.0
BYD1_k127_8367692_1 SMART Phospholipid glycerol acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 510.0
BYD1_k127_8367692_10 - - - - 0.0000000000000000000000000000000000004888 148.0
BYD1_k127_8367692_11 ErfK YbiS YcfS YnhG family protein - - - 0.0000000000000000000000004556 115.0
BYD1_k127_8367692_12 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.000000000000000276 83.0
BYD1_k127_8367692_13 thiamine diphosphate biosynthetic process K03154 - - 0.00000003535 57.0
BYD1_k127_8367692_2 PFAM Lytic transglycosylase catalytic K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004626 479.0
BYD1_k127_8367692_3 PFAM membrane bound O-acyl transferase MBOAT K19294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004772 462.0
BYD1_k127_8367692_4 Belongs to the TtcA family K21947 - 2.8.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008739 418.0
BYD1_k127_8367692_5 conserved protein (DUF2088) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002013 368.0
BYD1_k127_8367692_6 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005223 280.0
BYD1_k127_8367692_7 PFAM Xylose isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001453 247.0
BYD1_k127_8367692_8 Protein of unknown function (DUF459) K09795 - - 0.000000000000000000000000000000000000000000000007763 189.0
BYD1_k127_8367692_9 Protein of unknown function (DUF459) K09795 - - 0.0000000000000000000000000000000000000000000585 174.0
BYD1_k127_8373955_0 Methyl-accepting chemotaxis protein (MCP) signaling domain K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 531.0
BYD1_k127_8373955_1 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 455.0
BYD1_k127_8373955_2 PFAM Peptidase M16 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 398.0
BYD1_k127_8373955_3 PFAM inositol monophosphatase K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007561 292.0
BYD1_k127_8373955_4 Protein of unknown function (DUF554) K07150 - - 0.00000000000000000000000000000000000000000000000000000000000000000000107 241.0
BYD1_k127_8373955_5 hydrolase, HAD-superfamily, subfamily IIIA K03273 - 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000003493 224.0
BYD1_k127_8373955_6 PFAM CheW domain protein K03408 - - 0.0000000000000000000000000000000000000000000000000000002998 199.0
BYD1_k127_8373955_7 Domain of unknown function (DUF202) K00389 - - 0.0000000000000000000000008695 107.0
BYD1_k127_8373955_8 Tetratricopeptide repeat - - - 0.00000000000004255 78.0
BYD1_k127_8378432_0 HD domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 398.0
BYD1_k127_8378432_1 TraB family K09973 - - 0.000000000000000000000000000000000000000000000000003121 194.0
BYD1_k127_8378432_2 LexA-binding, inner membrane-associated putative hydrolase - - - 0.000000000000000000000000000000000000000000000002074 178.0
BYD1_k127_8378432_3 Anti-sigma-28 factor, FlgM - - - 0.000000005624 61.0
BYD1_k127_8378432_4 TIGRFAM MJ0042 family finger-like protein - - - 0.000000625 58.0
BYD1_k127_8421683_0 PFAM Type II secretion system protein E K02669 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 570.0
BYD1_k127_8421683_1 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 499.0
BYD1_k127_8421683_10 Tetratricopeptide repeat - - - 0.0000000000000000000000003571 118.0
BYD1_k127_8421683_11 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589,K13052 - - 0.0000000000000000008779 90.0
BYD1_k127_8421683_12 - - - - 0.00000000000008366 75.0
BYD1_k127_8421683_13 - - - - 0.0000000000002415 73.0
BYD1_k127_8421683_2 pyridine nucleotide-disulfide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009316 453.0
BYD1_k127_8421683_3 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant K03465 - 2.1.1.148 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002041 314.0
BYD1_k127_8421683_4 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 322.0
BYD1_k127_8421683_5 DoxX - - - 0.0000000000000000000000000000000000000000000000000000001863 199.0
BYD1_k127_8421683_6 CHASE2 K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000005555 186.0
BYD1_k127_8421683_7 - - - - 0.0000000000000000000000000000000000000000000002931 177.0
BYD1_k127_8421683_8 zinc-ribbon domain - - - 0.00000000000000000000000000000000000000004094 161.0
BYD1_k127_8421683_9 Redoxin domain protein - - - 0.00000000000000000000000000000000000000876 152.0
BYD1_k127_8474313_0 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003994 501.0
BYD1_k127_8474313_1 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000003588 232.0
BYD1_k127_8474313_2 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000000000000000000000005279 204.0
BYD1_k127_8474313_3 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000001139 193.0
BYD1_k127_8474313_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000002211 181.0
BYD1_k127_8474313_5 - - - - 0.0000000000000000000187 97.0
BYD1_k127_8524672_0 Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL K01952 - 6.3.5.3 0.0 1341.0
BYD1_k127_8524672_1 Glycosyl transferase family 41 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003653 458.0
BYD1_k127_8524672_2 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001402 269.0
BYD1_k127_8531028_0 PFAM Polysulphide reductase, NrfD K00185 - - 6.393e-226 704.0
BYD1_k127_8531028_1 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 445.0
BYD1_k127_8531028_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008988 370.0
BYD1_k127_856440_0 PAS domain K13924 - 2.1.1.80,3.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005727 541.0
BYD1_k127_856440_1 PFAM Cation transporter K03498 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001572 529.0
BYD1_k127_856440_2 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009116 408.0
BYD1_k127_856440_3 PDZ DHR GLGF domain protein K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 385.0
BYD1_k127_856440_4 Cation efflux family K16264 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 307.0
BYD1_k127_856440_5 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000276 270.0
BYD1_k127_856440_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001319 280.0
BYD1_k127_856440_7 PFAM Peptidase M23 - - - 0.0000000000000000000000000000000000000000000000000000000000008937 222.0
BYD1_k127_856440_8 - - - - 0.00000000000000000000000000000000000000000000000000001411 198.0
BYD1_k127_856440_9 zinc-ribbon domain - - - 0.0002362 49.0
BYD1_k127_8565053_0 Protein of unknown function (DUF3365) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 370.0
BYD1_k127_8565053_1 metal cluster binding - - - 0.0000000000000000000000000000000000000000000000000000000001129 211.0
BYD1_k127_8565053_2 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000000000000000000000000000002251 210.0
BYD1_k127_8565053_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - 0.00000000000000000000000000000000000000000000008842 171.0
BYD1_k127_8565053_4 Haemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000001196 94.0
BYD1_k127_8565053_5 HdeA/HdeB family - - - 0.0000002139 57.0
BYD1_k127_8573818_0 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003832 543.0
BYD1_k127_8573818_1 Belongs to the 'phage' integrase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009186 386.0
BYD1_k127_8573818_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000008944 120.0
BYD1_k127_8573818_3 - - - - 0.00000000000000000001744 100.0
BYD1_k127_8573818_4 von Willebrand factor, type A - - - 0.000000000000000188 94.0
BYD1_k127_8593822_0 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 GO:0003674,GO:0003824,GO:0004180,GO:0004181,GO:0005488,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0008270,GO:0016787,GO:0019538,GO:0043167,GO:0043169,GO:0043170,GO:0044238,GO:0046872,GO:0046914,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.17.19 1.317e-195 622.0
BYD1_k127_8593822_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001459 541.0
BYD1_k127_8593822_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 496.0
BYD1_k127_8593822_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 445.0
BYD1_k127_8593822_4 SMART Metal-dependent phosphohydrolase, HD region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006539 267.0
BYD1_k127_8593822_5 PFAM ABC transporter related K01995 - - 0.00000000000000000000000000000000000000000000000000000000001171 210.0
BYD1_k127_8593822_6 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.00000000000000000000000000000000000002057 147.0
BYD1_k127_8593822_7 antisigma factor binding K03409,K05946 - 2.4.1.187 0.00000002067 60.0
BYD1_k127_8603616_0 Protein of unknown function DUF115 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 582.0
BYD1_k127_8603616_1 PFAM Pyridoxal-5'-phosphate-dependent protein beta subunit K01738,K01883,K12339 - 2.5.1.47,6.1.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003775 476.0
BYD1_k127_8603616_2 response regulator, receiver - - - 0.0000000000005019 72.0
BYD1_k127_862793_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1110.0
BYD1_k127_862793_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1053.0
BYD1_k127_862793_2 PFAM DNA polymerase III, beta chain K02338 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000004201 254.0
BYD1_k127_862793_3 PFAM DNA polymerase III, beta chain K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000002393 207.0
BYD1_k127_8683894_0 cAMP biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 454.0
BYD1_k127_8683894_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 335.0
BYD1_k127_8683894_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000002536 145.0
BYD1_k127_8683894_3 RTX toxins and related Ca2 binding proteins - - - 0.0000000000000000001706 100.0
BYD1_k127_8684645_0 - - - - 0.0000000000000000000000000000000000000000000001966 175.0
BYD1_k127_8684645_1 PFAM Glycosyl transferase family 2 K07011 - - 0.0000000000000000000000000000000000000000000002726 173.0
BYD1_k127_8684645_2 - - - - 0.0000000000000000000000000000004112 129.0
BYD1_k127_873646_0 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001068 265.0
BYD1_k127_873646_1 AsmA family - - - 0.0000000003314 72.0
BYD1_k127_8746590_0 histidine kinase A domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 489.0
BYD1_k127_8746590_1 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000004237 228.0
BYD1_k127_8746590_2 XdhC and CoxI family K07402 - - 0.00000000000000000000000000000000000000000000000000000001579 211.0
BYD1_k127_8746590_3 PFAM Acyltransferase - - - 0.0000000000000000000000000000000000000000000001219 182.0
BYD1_k127_8752481_0 Belongs to the peptidase S16 family K04076 - 3.4.21.53 5.03e-279 880.0
BYD1_k127_8752481_1 Phage late control gene D protein (GPD) K11904 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000408 479.0
BYD1_k127_8752481_10 Protein of unknown function (DUF3540) - - - 0.000000000000000001127 94.0
BYD1_k127_8752481_11 PFAM ATP synthase I - - - 0.000000000000000002584 90.0
BYD1_k127_8752481_12 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter K02116 - - 0.000000000000000002679 87.0
BYD1_k127_8752481_13 negative regulation of superoxide anion generation K14379 GO:0000323,GO:0001101,GO:0001501,GO:0001503,GO:0001505,GO:0001817,GO:0001818,GO:0001894,GO:0002237,GO:0002376,GO:0002520,GO:0002521,GO:0002573,GO:0003674,GO:0003824,GO:0003993,GO:0005488,GO:0005506,GO:0005575,GO:0005576,GO:0005615,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005773,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006952,GO:0007162,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0008198,GO:0008199,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009743,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0014070,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0019222,GO:0030097,GO:0030099,GO:0030154,GO:0030155,GO:0030316,GO:0030334,GO:0030335,GO:0031224,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031347,GO:0031348,GO:0031667,GO:0032101,GO:0032102,GO:0032496,GO:0032501,GO:0032502,GO:0032651,GO:0032652,GO:0032655,GO:0032680,GO:0032691,GO:0032692,GO:0032695,GO:0032720,GO:0032879,GO:0032928,GO:0032929,GO:0033273,GO:0033555,GO:0033591,GO:0033993,GO:0034097,GO:0034284,GO:0034641,GO:0036314,GO:0040012,GO:0040017,GO:0042221,GO:0042578,GO:0042592,GO:0042726,GO:0042742,GO:0043167,GO:0043169,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044281,GO:0044421,GO:0044424,GO:0044425,GO:0044444,GO:0044464,GO:0045019,GO:0045428,GO:0045453,GO:0046483,GO:0046849,GO:0046872,GO:0046914,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048705,GO:0048731,GO:0048771,GO:0048856,GO:0048869,GO:0048871,GO:0050727,GO:0050728,GO:0050789,GO:0050794,GO:0050830,GO:0050896,GO:0051171,GO:0051172,GO:0051239,GO:0051241,GO:0051270,GO:0051272,GO:0051704,GO:0051707,GO:0060249,GO:0060348,GO:0060349,GO:0065007,GO:0065008,GO:0070723,GO:0071704,GO:0080134,GO:0090322,GO:0097305,GO:0098542,GO:1901360,GO:1901564,GO:1901700,GO:1903426,GO:1903427,GO:1903555,GO:1903556,GO:1904406,GO:2000145,GO:2000147,GO:2000377,GO:2000378 3.1.3.2 0.0000000008926 70.0
BYD1_k127_8752481_2 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 314.0
BYD1_k127_8752481_3 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 331.0
BYD1_k127_8752481_4 Modulates transcription in response to changes in cellular NADH NAD( ) redox state K01926 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009891 291.0
BYD1_k127_8752481_5 Domain of unknown function (DUF5122) beta-propeller - - - 0.00000000000000000000000000000000000000000000000000000000000000000000745 253.0
BYD1_k127_8752481_6 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.0000000000000000000000000000000000003225 144.0
BYD1_k127_8752481_7 Pentapeptide repeat protein - - - 0.0000000000000000000000000000000001102 146.0
BYD1_k127_8752481_8 histidine kinase A domain protein - - - 0.000000000000000000000000000000002014 134.0
BYD1_k127_8752481_9 Domain of unknown function (DUF4150) - - - 0.0000000000000000000000000000001689 127.0
BYD1_k127_8755654_0 TIGRFAM succinate dehydrogenase or fumarate reductase, flavoprotein subunit K00239,K00244 - 1.3.5.1,1.3.5.4 5.776e-321 990.0
BYD1_k127_8755654_1 TIGRFAM succinate dehydrogenase and fumarate reductase iron-sulfur protein K00240,K00245 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001626 428.0
BYD1_k127_8755654_2 PFAM fumarate reductase respiratory complex K00246 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009898 295.0
BYD1_k127_8755654_3 glycosyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000001837 237.0
BYD1_k127_8755654_4 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000007424 234.0
BYD1_k127_8755654_5 WSC domain-containing protein - - - 0.00000000000000000000001172 108.0
BYD1_k127_8809099_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 1223.0
BYD1_k127_8809099_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455,K11747 - - 2.655e-211 670.0
BYD1_k127_8809099_2 Protein of unknown function (DUF3124) - - - 0.000000000000000000000000000000000000000000001453 169.0
BYD1_k127_8827090_0 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005686 303.0
BYD1_k127_8827090_1 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002922 269.0
BYD1_k127_8827090_2 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 0.000000000000000000000000000000000000000000000000000000000000000009441 235.0
BYD1_k127_8827090_3 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 0.00000000000000000000000000000000000000000000000000000000000003491 217.0
BYD1_k127_8827090_4 double-stranded DNA endodeoxyribonuclease activity - - - 0.00000000000000000000000000000000000000005791 158.0
BYD1_k127_8827090_5 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000005602 154.0
BYD1_k127_8827090_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.0000000000000000000000000000000000000005955 150.0
BYD1_k127_8827090_7 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000000002072 106.0
BYD1_k127_8827090_8 - - - - 0.0000000000000000000229 91.0
BYD1_k127_8852983_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 1.474e-294 937.0
BYD1_k127_8852983_1 PFAM phosphoesterase RecJ domain protein K06881 - 3.1.13.3,3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003394 299.0
BYD1_k127_8852983_2 Protein of unknown function (DUF503) K09764 - - 0.0000000000000000000000000000004061 125.0
BYD1_k127_8852983_3 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009266,GO:0009409,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030490,GO:0033554,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042274,GO:0043021,GO:0043024,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000009972 87.0
BYD1_k127_8852983_4 Protein of unknown function (DUF448) K07742 - - 0.00000000000000002358 84.0
BYD1_k127_8852983_5 Participates in both transcription termination and antitermination K02600 - - 0.00000000000007486 74.0
BYD1_k127_885374_0 elongation factor G domain IV K02355 - - 9.95e-321 995.0
BYD1_k127_885374_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000007056 212.0
BYD1_k127_885374_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000008075 106.0
BYD1_k127_887056_0 NeuB family K01654 - 2.5.1.56 6.03e-317 986.0
BYD1_k127_887056_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 3.54e-216 679.0
BYD1_k127_887056_10 radical SAM domain protein K06139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003555 276.0
BYD1_k127_887056_11 radical SAM domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001431 280.0
BYD1_k127_887056_12 PFAM YbbR family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000002496 232.0
BYD1_k127_887056_13 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000001432 226.0
BYD1_k127_887056_14 Spore coat polysaccharide biosynthesis protein K07257 - - 0.00000000000000000000000000000000000000000003183 171.0
BYD1_k127_887056_15 Aminoglycoside phosphotransferase - - - 0.0000000000000000000000000000000000000000003514 166.0
BYD1_k127_887056_16 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000319 96.0
BYD1_k127_887056_17 Flagellar protein YcgR - - - 0.0000003416 60.0
BYD1_k127_887056_2 Glycine cleavage system T protein K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 462.0
BYD1_k127_887056_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 461.0
BYD1_k127_887056_4 response regulator, receiver K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001352 424.0
BYD1_k127_887056_5 PFAM Endonuclease Exonuclease phosphatase K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001636 389.0
BYD1_k127_887056_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 334.0
BYD1_k127_887056_7 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 321.0
BYD1_k127_887056_8 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K13941 - 2.5.1.15,2.7.6.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002079 312.0
BYD1_k127_887056_9 Protein of unknown function (DUF3365) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 305.0
BYD1_k127_8947050_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 6.834e-224 713.0
BYD1_k127_8947050_1 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 433.0
BYD1_k127_8947050_2 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 351.0
BYD1_k127_8947050_3 Ion transport 2 domain protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002602 335.0
BYD1_k127_8947050_4 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000004209 141.0
BYD1_k127_8947050_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000003358 130.0
BYD1_k127_8947050_6 - - - - 0.0000000000000000000000000004325 115.0
BYD1_k127_8988671_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 419.0
BYD1_k127_8988671_1 TIGRFAM flagellar motor stator protein MotA K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 306.0
BYD1_k127_8988671_2 Two component transcriptional regulator, LytTR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006867 305.0
BYD1_k127_8988671_3 Membrane MotB of proton-channel complex MotA/MotB K02557 - - 0.000000000000000000000000000000002936 134.0
BYD1_k127_8988671_4 PilZ domain - - - 0.00000001608 63.0
BYD1_k127_9003603_0 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003766 424.0
BYD1_k127_9003603_1 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002414 263.0
BYD1_k127_9003603_2 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000000000001829 164.0
BYD1_k127_9003603_3 Involved in the biosynthesis of porphyrin-containing compound - - - 0.0000000000000000000000000000000009238 135.0
BYD1_k127_9003603_4 Radical SAM superfamily - - - 0.00000000000000000000000000002104 131.0
BYD1_k127_9003603_5 Glycosyltransferase like family 2 - - - 0.00000000002023 77.0
BYD1_k127_9030513_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 3.207e-223 697.0
BYD1_k127_9030513_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 459.0
BYD1_k127_9030513_2 Domain of unknown function (DUF4139) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008487 298.0
BYD1_k127_9030513_3 PFAM Amino acid-binding ACT - - - 0.0000000000000000000000000000000000000000000000000000000000000002007 222.0
BYD1_k127_9199922_0 extracellular solute-binding protein, family 5 K02035,K15584 - - 7.583e-225 707.0
BYD1_k127_9199922_1 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006901 463.0
BYD1_k127_9199922_10 acid phosphatase activity - - - 0.00004517 49.0
BYD1_k127_9199922_2 ATP-independent chaperone mediated protein folding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 427.0
BYD1_k127_9199922_3 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004708 407.0
BYD1_k127_9199922_4 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000654 404.0
BYD1_k127_9199922_5 Protein of unknown function (DUF1566) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008031 372.0
BYD1_k127_9199922_6 Belongs to the ABC transporter superfamily K02031,K15583 - - 0.0000000000000000000008417 96.0
BYD1_k127_9199922_7 Belongs to the 'phage' integrase family - - - 0.00000000000000000003166 92.0
BYD1_k127_9199922_8 methyltransferase K15256 - - 0.000000001158 68.0
BYD1_k127_9199922_9 - - - - 0.000002665 57.0
BYD1_k127_9201851_0 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004654,GO:0005488,GO:0006139,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009987,GO:0010468,GO:0010605,GO:0010629,GO:0016070,GO:0016071,GO:0016740,GO:0016772,GO:0016779,GO:0019222,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0046483,GO:0046700,GO:0048519,GO:0050789,GO:0060255,GO:0065007,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901361,GO:1901363,GO:1901575 2.7.7.8 3.119e-290 908.0
BYD1_k127_9201851_1 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 5.269e-199 629.0
BYD1_k127_9201851_2 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003455 451.0
BYD1_k127_9201851_3 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 375.0
BYD1_k127_9201851_4 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000008376 252.0
BYD1_k127_9201851_5 PFAM Appr-1-p processing domain protein - - - 0.00000000000000000000000000000000000000000000000000000001022 203.0
BYD1_k127_9201851_6 Methyltransferase fkbm family - - - 0.0000000000000000000000000000000000000000000000000001836 194.0
BYD1_k127_9201851_7 Alpha beta hydrolase - - - 0.00000000000000000000000000000000002687 137.0
BYD1_k127_9201851_8 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000000000000000000245 93.0
BYD1_k127_9225624_0 TIGRFAM asparagine synthase (glutamine-hydrolyzing) K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001696 403.0
BYD1_k127_9225624_1 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.0000000000000000000000000000000000000000000000000000000000000000002494 233.0
BYD1_k127_9225624_2 TIGRFAM Mannose-1-phosphate guanylyltransferase mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000004587 112.0
BYD1_k127_9264013_0 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000003255 156.0
BYD1_k127_9264013_1 Transcriptional regulator, Crp Fnr family - - - 0.00000000000000000000000000000000004067 141.0
BYD1_k127_9264013_2 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000008899 95.0
BYD1_k127_9264013_3 PD-(D/E)XK nuclease superfamily - - - 0.0000000000002282 80.0
BYD1_k127_9294578_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 607.0
BYD1_k127_9294578_1 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002664 485.0
BYD1_k127_9294578_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 474.0
BYD1_k127_9294578_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002653 452.0
BYD1_k127_9294578_4 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784,K12448 - 5.1.3.2,5.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009919 409.0
BYD1_k127_9294578_5 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 395.0
BYD1_k127_9294578_6 PFAM ABC transporter related K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002108 381.0
BYD1_k127_9294578_7 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004067 305.0
BYD1_k127_9294578_8 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000002252 107.0
BYD1_k127_9309010_0 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003605 477.0
BYD1_k127_9309010_1 Protein of unknown function (DUF933) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 446.0
BYD1_k127_9309010_2 TIGRFAM metallophosphoesterase, MG_246 BB_0505 family K09769 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003104 306.0
BYD1_k127_9309010_3 Sulfotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000001146 228.0
BYD1_k127_9309010_4 calcium- and calmodulin-responsive adenylate cyclase activity - - - 0.00000000000000000000000000000000000000000000000000003621 207.0
BYD1_k127_9309010_5 Domain of unknown function (DUF4416) - - - 0.00000000000000000000001765 105.0
BYD1_k127_9309010_6 Response regulator receiver - - - 0.00000001803 64.0
BYD1_k127_9351818_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 470.0
BYD1_k127_9351818_1 response regulator, receiver K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 454.0
BYD1_k127_9351818_2 PFAM DNA polymerase III delta K02340 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000398 276.0
BYD1_k127_9351818_3 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000004275 229.0
BYD1_k127_9351818_4 PFAM aminotransferase class I and II K09758 - 4.1.1.12 0.000000000000000000000000000000000000000000000000000000000002288 218.0
BYD1_k127_9351818_5 Lipopolysaccharide-assembly - - - 0.0000000000000000000000000000119 127.0
BYD1_k127_9375613_0 PFAM SNF2-related protein K08282 - 2.7.11.1 0.0 1634.0
BYD1_k127_9375613_1 SMART Elongator protein 3 MiaB NifB - - - 2.365e-274 871.0
BYD1_k127_9375613_10 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 0.00000000000000000000000000007311 119.0
BYD1_k127_9375613_2 extracellular solute-binding protein, family 5 K02035,K13893 - - 1.779e-233 734.0
BYD1_k127_9375613_3 Pfam:T6SS_VipB K11896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006118 603.0
BYD1_k127_9375613_4 PFAM LemA K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002855 280.0
BYD1_k127_9375613_5 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000148 272.0
BYD1_k127_9375613_6 Type VI secretion, TssG K11895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003724 269.0
BYD1_k127_9375613_7 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000005421 232.0
BYD1_k127_9375613_8 Membrane K08988 - - 0.00000000000000000000000000000000000000000000000000000000001104 213.0
BYD1_k127_9375613_9 Tetratricopeptide TPR_2 repeat protein - - - 0.000000000000000000000000000000000000000000000000000000001069 221.0
BYD1_k127_937815_0 CoA-binding domain protein K09181 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 319.0
BYD1_k127_937815_1 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001304 304.0
BYD1_k127_937815_2 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001083 257.0
BYD1_k127_937815_3 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000001254 153.0
BYD1_k127_9396878_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - 9.61e-286 884.0
BYD1_k127_9396878_1 PFAM NADPH-dependent FMN reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001127 308.0
BYD1_k127_9396878_2 Isochorismatase family - - - 0.000000000000000000000000000000000000000000000000000000002307 205.0
BYD1_k127_9396878_3 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000007741 152.0
BYD1_k127_9396878_4 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000131 132.0
BYD1_k127_9396878_5 TIGRFAM 4-oxalocrotonate tautomerase family enzyme K01821 - 5.3.2.6 0.000000000000000000000000000002465 120.0
BYD1_k127_9398366_0 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003983 533.0
BYD1_k127_9398366_1 C-5 cytosine-specific DNA methylase K00558 - 2.1.1.37 0.000000000000000000000000000000000000000000000000000000002093 206.0
BYD1_k127_9406556_0 glycosyl transferase - - - 0.0 1112.0
BYD1_k127_9406556_1 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 398.0
BYD1_k127_9406556_2 Bacterial transferase hexapeptide (six repeats) K00661 - 2.3.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 312.0
BYD1_k127_9406556_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K02170 - 3.1.1.85 0.00000000000000004095 85.0
BYD1_k127_9419957_0 PFAM NADH Ubiquinone plastoquinone (complex I) K05568 - - 3.238e-225 706.0
BYD1_k127_9419957_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333,K13378 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 556.0
BYD1_k127_9419957_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340,K05576 - 1.6.5.3 0.0000000000000000000000000001428 118.0
BYD1_k127_9419957_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005011 457.0
BYD1_k127_9419957_3 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 411.0
BYD1_k127_9419957_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 301.0
BYD1_k127_9419957_5 Penicillin V acylase and related amidases K01442 - 3.5.1.24 0.0000000000000000000000000000000000000000000000000000000000007483 222.0
BYD1_k127_9419957_6 4Fe-4S ferredoxin iron-sulfur binding domain protein K00338,K05580 - 1.6.5.3 0.00000000000000000000000000000000000000000000003089 177.0
BYD1_k127_9419957_7 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.000000000000000000000000000000000000000000145 165.0
BYD1_k127_9419957_8 PFAM NADH dehydrogenase (ubiquinone) 30 kDa subunit K00332 - 1.6.5.3 0.000000000000000000000000000000000001052 145.0
BYD1_k127_9419957_9 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000000000000001774 124.0
BYD1_k127_9436232_0 Homocysteine biosynthesis enzyme, sulfur-incorporation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 604.0
BYD1_k127_9436232_1 PFAM Metal-dependent phosphohydrolase, HD K00970,K00974 - 2.7.7.19,2.7.7.72 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001652 601.0
BYD1_k127_9436232_10 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 377.0
BYD1_k127_9436232_11 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 362.0
BYD1_k127_9436232_12 nucleic acid binding OB-fold tRNA helicase-type K03698 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 358.0
BYD1_k127_9436232_13 PFAM amidohydrolase K20810 - 3.5.4.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 307.0
BYD1_k127_9436232_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000972 282.0
BYD1_k127_9436232_15 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001325 281.0
BYD1_k127_9436232_16 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005153 279.0
BYD1_k127_9436232_17 PFAM OmpA MotB domain protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008348 269.0
BYD1_k127_9436232_18 Phosphotransferase enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002696 252.0
BYD1_k127_9436232_19 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000008683 231.0
BYD1_k127_9436232_2 two component, sigma54 specific, transcriptional regulator, Fis family K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004859 571.0
BYD1_k127_9436232_20 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000001022 227.0
BYD1_k127_9436232_21 Chemotaxis phosphatase CheX K03409 - - 0.0000000000000000000000000000000000000000000000000000000000002661 215.0
BYD1_k127_9436232_22 - - - - 0.0000000000000000000000000000000000000000000000000000008257 198.0
BYD1_k127_9436232_23 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000000000000000000000000000000001124 184.0
BYD1_k127_9436232_24 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000002898 181.0
BYD1_k127_9436232_25 Glycosyl transferase, family 2 - - - 0.00000000000000000000000000000000001163 156.0
BYD1_k127_9436232_26 PFAM FAD linked oxidase domain protein K00102,K00104 - 1.1.2.4,1.1.3.15 0.0000000000000000008713 87.0
BYD1_k127_9436232_27 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.0000000000000119 84.0
BYD1_k127_9436232_28 - - - - 0.0000112 53.0
BYD1_k127_9436232_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 529.0
BYD1_k127_9436232_4 Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily K01465 GO:0003674,GO:0003824,GO:0004038,GO:0004151,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006144,GO:0006145,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016787,GO:0016810,GO:0016812,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046390,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002959 504.0
BYD1_k127_9436232_5 Belongs to the ATCase OTCase family K00609 GO:0003674,GO:0003824,GO:0004070,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006220,GO:0006221,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016743,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 474.0
BYD1_k127_9436232_6 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001186 404.0
BYD1_k127_9436232_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002044 404.0
BYD1_k127_9436232_8 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 408.0
BYD1_k127_9436232_9 repeat-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003961 391.0
BYD1_k127_9460466_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 2.894e-292 904.0
BYD1_k127_9460466_1 DUF based on E. rectale Gene description (DUF3880) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004589 432.0
BYD1_k127_9460466_2 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003036 392.0
BYD1_k127_9460466_3 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 375.0
BYD1_k127_9460466_4 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000000000000000000003668 246.0
BYD1_k127_9460466_5 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000001225 244.0
BYD1_k127_9460466_6 Glycosyltransferase like family - - - 0.000000000000000000000000000000000000000002026 169.0
BYD1_k127_9460466_7 Transcriptional regulatory protein - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000009454 117.0
BYD1_k127_9460466_8 Zinc dependent phospholipase C - - - 0.00000000000000001376 93.0
BYD1_k127_9460466_9 Lipopolysaccharide-assembly, LptC-related - - - 0.0000000000000003263 85.0
BYD1_k127_9460920_0 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 327.0
BYD1_k127_9460920_2 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000001842 109.0
BYD1_k127_9461455_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296,K07788,K07789,K18138 - - 7.136e-305 959.0
BYD1_k127_9461455_1 aminotransferase class I and II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 547.0
BYD1_k127_9461455_2 histidine kinase A domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000367 453.0
BYD1_k127_9461455_3 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000004264 201.0
BYD1_k127_9469230_0 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 3.511e-313 969.0
BYD1_k127_9469230_1 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 426.0
BYD1_k127_9469230_2 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008572 345.0
BYD1_k127_9469230_3 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001251 248.0
BYD1_k127_9469230_4 - - - - 0.0000000000000000000000000002526 126.0
BYD1_k127_9469230_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000001377 78.0
BYD1_k127_9469230_6 - - - - 0.000000000001243 70.0
BYD1_k127_9500048_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.612e-307 948.0
BYD1_k127_9500048_1 PFAM magnesium chelatase ChlI subunit K07391 - - 8.875e-225 706.0
BYD1_k127_9500048_10 PFAM Prephenate dehydrogenase K04517,K14187 - 1.3.1.12,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004102 286.0
BYD1_k127_9500048_11 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008019 270.0
BYD1_k127_9500048_12 PFAM Protein kinase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001595 238.0
BYD1_k127_9500048_13 Glutamine amidotransferase class-I - - - 0.000000000000000000000000000000000000000001094 163.0
BYD1_k127_9500048_14 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000001447 145.0
BYD1_k127_9500048_15 - - - - 0.00000000000000000000000000000000002052 156.0
BYD1_k127_9500048_16 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000002018 137.0
BYD1_k127_9500048_17 Belongs to the UPF0434 family K09791 - - 0.00000000000000000001628 92.0
BYD1_k127_9500048_2 Anthranilate synthase component I K01657,K13503 - 4.1.3.27 8.223e-199 629.0
BYD1_k127_9500048_3 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002714 497.0
BYD1_k127_9500048_4 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000624 477.0
BYD1_k127_9500048_5 PFAM Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007275 454.0
BYD1_k127_9500048_6 Catalyzes a transaldol reaction between 6-deoxy-5- ketofructose 1-phosphate (DKFP) and L-aspartate semialdehyde (ASA) with an elimination of hydroxypyruvaldehyde phosphate to yield 2- amino-3,7-dideoxy-D-threo-hept-6-ulosonate (ADH). Plays a key role in an alternative pathway of the biosynthesis of 3-dehydroquinate (DHQ), which is involved in the canonical pathway for the biosynthesis of aromatic amino acids K11645 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 424.0
BYD1_k127_9500048_7 PFAM 3-dehydroquinate synthase K11646 - 1.4.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 426.0
BYD1_k127_9500048_8 esterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001885 321.0
BYD1_k127_9500048_9 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 295.0
BYD1_k127_9502460_0 Chemotaxis sensory transducer K03406 - - 4.191e-214 684.0
BYD1_k127_9502460_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005862 602.0
BYD1_k127_9502460_11 PilZ domain - - - 0.000001323 57.0
BYD1_k127_9502460_12 transposase or invertase - - - 0.000007308 50.0
BYD1_k127_9502460_2 Belongs to the UPF0597 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006944 527.0
BYD1_k127_9502460_3 PFAM Extracellular ligand-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 513.0
BYD1_k127_9502460_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001795 424.0
BYD1_k127_9502460_5 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008493 362.0
BYD1_k127_9502460_6 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000008999 241.0
BYD1_k127_9502460_7 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000004433 207.0
BYD1_k127_9502460_8 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000001331 180.0
BYD1_k127_9502460_9 Pfam:DUF2029 - - - 0.0000000000000000000000006629 119.0
BYD1_k127_9568425_0 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004108 251.0
BYD1_k127_9568425_1 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000000000000000000000000000000001089 235.0
BYD1_k127_9568425_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.0000000000000000000000000000000000000000000000000000000000007166 213.0
BYD1_k127_9568425_3 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.0000000000000000000000000000000000005218 146.0
BYD1_k127_9568425_5 flagellar motor switch protein FliM K02416 - - 0.00002367 46.0
BYD1_k127_9585324_0 PFAM Bile acid sodium symporter K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000053 536.0
BYD1_k127_9585324_1 Predicted permease K07089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000069 432.0
BYD1_k127_9585324_2 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000004765 164.0
BYD1_k127_9585324_3 DoxX - - - 0.0000000000000000000000000000000000001084 147.0
BYD1_k127_9585324_4 PAS fold - - - 0.000000000000000000000000000000000001222 157.0
BYD1_k127_9585324_5 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000001959 138.0
BYD1_k127_9585324_6 GGDEF domain - - - 0.00000000000000000000000000000004632 143.0
BYD1_k127_9585324_7 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.000000000000000000000000000006916 125.0
BYD1_k127_9585324_8 SMART regulatory protein ArsR - - - 0.0000000000000000000000003995 112.0
BYD1_k127_9585324_9 - - - - 0.00000000000000000000003601 105.0
BYD1_k127_9590824_0 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 345.0
BYD1_k127_9590824_1 PFAM Ribosomal small subunit Rsm22 - - - 0.00000000000000000000000000000000000000000000000000000000000005412 230.0
BYD1_k127_9590824_2 PFAM NUDIX hydrolase K01823 - 5.3.3.2 0.00000000000000000000000000000000000000000000000000000000001312 211.0
BYD1_k127_9590824_3 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009249,GO:0009987,GO:0010467,GO:0018065,GO:0018193,GO:0018205,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0051604,GO:0071704,GO:1901564 2.3.1.181 0.0000000000000000000000000000000000000000000000000000001377 201.0
BYD1_k127_9590824_4 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000745 123.0
BYD1_k127_9600439_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008471 417.0
BYD1_k127_9600439_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 412.0
BYD1_k127_9600439_2 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003349 401.0
BYD1_k127_9600439_3 TIGRFAM phosphate binding protein K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009459 301.0
BYD1_k127_9600439_4 PFAM response regulator receiver K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009804 292.0
BYD1_k127_9600439_5 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000004294 255.0
BYD1_k127_9623311_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 354.0
BYD1_k127_9623311_1 GGDEF domain' - - - 0.0000000000000000000000000000000000000000001425 183.0
BYD1_k127_9623311_2 PAS domain containing protein K21084 - 2.7.7.65 0.000000000001199 82.0
BYD1_k127_9623311_3 His Kinase A (phosphoacceptor) domain - - - 0.00002474 58.0
BYD1_k127_965931_0 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008379 554.0
BYD1_k127_965931_1 PEGA domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001101 258.0
BYD1_k127_965931_2 tRNA (guanine(37)-N(1))-methyltransferase activity - - - 0.00000001284 63.0
BYD1_k127_9690405_0 Phage late control gene D protein (GPD) K11904 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001661 508.0
BYD1_k127_9690405_1 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 479.0
BYD1_k127_9690405_2 rhs element vgr protein K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 470.0
BYD1_k127_9690405_3 Phage late control gene D protein (GPD) K11904 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001295 447.0
BYD1_k127_9690405_4 Chemotaxis sensory transducer K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007852 377.0
BYD1_k127_9690405_5 Predicted methyltransferase regulatory domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003277 263.0
BYD1_k127_9690405_6 Major Facilitator Superfamily K08177 - - 0.000000000000000000000000001433 113.0
BYD1_k127_9690405_7 PFAM Tetratricopeptide repeat - - - 0.0009063 52.0
BYD1_k127_9722101_0 response regulator, receiver - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001183 288.0
BYD1_k127_9722101_1 Divergent polysaccharide deacetylase K09798 - - 0.000000000000000000000000000000000000000000000000000000002238 210.0
BYD1_k127_9722101_2 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0008791 47.0
BYD1_k127_9722464_0 PFAM Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003363 338.0
BYD1_k127_9722464_1 Predicted methyltransferase regulatory domain - GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001291 332.0
BYD1_k127_9722464_2 Protein of unknown function (DUF2721) - - - 0.0000000000000000000001949 100.0
BYD1_k127_9727011_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 1.36e-208 654.0
BYD1_k127_9727011_1 PFAM tRNA synthetase class II (D K and N) K01893 - 6.1.1.22 4.155e-199 630.0
BYD1_k127_9727011_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 GO:0003674,GO:0003824,GO:0004812,GO:0004831,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016874,GO:0016875,GO:0019752,GO:0034641,GO:0034660,GO:0043038,GO:0043039,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564 6.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 550.0
BYD1_k127_973952_0 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003901 617.0
BYD1_k127_973952_1 Phage late control gene D protein (GPD) K11904 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002189 540.0
BYD1_k127_973952_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 386.0
BYD1_k127_973952_3 ABC transporter substrate binding protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002139 327.0
BYD1_k127_973952_4 Belongs to the peptidase S24 family K03503 - - 0.000000000000000000000000000000000000000000000000000000000004505 210.0
BYD1_k127_973952_5 Pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000004839 113.0
BYD1_k127_973952_6 Putative transposase, YhgA-like - - - 0.000000000157 66.0
BYD1_k127_976930_0 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 574.0
BYD1_k127_976930_1 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 339.0
BYD1_k127_976930_2 Histidine kinase - - - 0.000000000000000000000000004002 115.0
BYD1_k127_976930_3 Uncharacterized protein conserved in bacteria (DUF2169) - - - 0.00000005679 63.0
BYD1_k127_9783485_0 Diguanylate cyclase, GGDEF domain - - - 2.959e-236 756.0
BYD1_k127_9783485_1 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009103 554.0
BYD1_k127_9783485_2 PFAM CBS domain containing protein K04767 - - 0.000000000000000000000000000000000000000000000000000004584 198.0
BYD1_k127_9783485_3 PFAM transferase hexapeptide repeat containing protein K13018 - 2.3.1.201 0.00000000000000004447 82.0
BYD1_k127_9787420_0 Molecular chaperone. Has ATPase activity K04079 - - 1.678e-244 770.0
BYD1_k127_9787420_1 transporter antisigma-factor antagonist STAS K03321 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 488.0
BYD1_k127_9787420_2 NlpC/P60 family - - - 0.000000000000000000000000000000001252 137.0
BYD1_k127_9787420_3 - - - - 0.0000000000000000000000007973 107.0
BYD1_k127_9834223_0 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 469.0
BYD1_k127_9838044_0 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 414.0
BYD1_k127_9838044_1 PFAM response regulator receiver K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004286 265.0
BYD1_k127_9838044_2 Phosphoribosyl transferase domain - - - 0.00000000000000000000000000000000000000000000000000000000002421 214.0
BYD1_k127_9838044_3 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000007393 185.0
BYD1_k127_9852112_0 Cytochrome c bacterial - - - 5.318e-272 845.0
BYD1_k127_9852112_1 4Fe-4S dicluster domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006705 465.0
BYD1_k127_9852112_10 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.000000000004423 69.0
BYD1_k127_9852112_2 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004295 419.0
BYD1_k127_9852112_3 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 398.0
BYD1_k127_9852112_4 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003919 355.0
BYD1_k127_9852112_5 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004822 310.0
BYD1_k127_9852112_6 POT family K03305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005064 299.0
BYD1_k127_9852112_7 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001034 287.0
BYD1_k127_9852112_8 - - - - 0.0000000000000000000000000000000000000000000000003129 186.0
BYD1_k127_9852112_9 cytotoxic translational repressor of toxin-antitoxin K06218 - - 0.00000000000000000000005593 100.0
BYD1_k127_9855786_0 SMART Elongator protein 3 MiaB NifB K22226 - - 2.558e-219 684.0
BYD1_k127_9855786_1 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003361 405.0
BYD1_k127_9855786_2 PFAM ABC transporter K02471 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 334.0
BYD1_k127_9855786_3 mechanosensitive ion channel - - - 0.0000000000000000000000000000000000000000000000000000002229 206.0
BYD1_k127_9859362_0 Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity K07456 - - 5.788e-233 743.0
BYD1_k127_9859362_1 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000001898 215.0
BYD1_k127_9859362_2 Phage late control gene D protein (GPD) K11904 - - 0.00000000000000000000000000000000000000000000000000000000104 213.0
BYD1_k127_9875316_0 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 519.0
BYD1_k127_9875316_1 histidine kinase HAMP region domain protein K03406 - - 0.00004956 48.0
BYD1_k127_9885596_0 Belongs to the 5'-nucleotidase family K11751 - 3.1.3.5,3.6.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 521.0
BYD1_k127_9885596_1 Major facilitator superfamily K13021 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004783 444.0
BYD1_k127_992331_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 3.454e-310 958.0
BYD1_k127_992331_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 3.577e-207 654.0
BYD1_k127_992331_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003253 471.0
BYD1_k127_992331_3 Belongs to the UPF0109 family K06960 - - 0.0000000000000000000000000000000004558 132.0
BYD1_k127_992331_4 Belongs to the bacterial ribosomal protein bS16 family K02959 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000002093 132.0
BYD1_k127_992331_5 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.00000000000002272 77.0
BYD1_k127_992331_6 Type II secretion system (T2SS), protein K K02460 - - 0.000000001518 66.0
BYD1_k127_9932870_0 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006312 299.0
BYD1_k127_9932870_1 Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide K08641 - 3.4.13.22 0.000000000000000000000000000000000000000000000000000000000000000000000000003649 267.0
BYD1_k127_9932870_2 Protein of unknown function (DUF1015) - - - 0.000000000000000000000000000000000000000000000000000000000005761 219.0
BYD1_k127_9932870_3 ubiE/COQ5 methyltransferase family K07755 - 2.1.1.137 0.0000000000000000000000000000000000000000000000000000000001753 209.0
BYD1_k127_9987912_0 Belongs to the peptidase M16 family K07263 - - 8.886e-236 757.0
BYD1_k127_9987912_1 Signal transducing histidine kinase homodimeric K03407 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007373 596.0
BYD1_k127_9987912_2 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000035 310.0
BYD1_k127_9987912_3 PFAM peptidase M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006035 263.0
BYD1_k127_9987912_4 PFAM cytochrome c class III - - - 0.000000000000000000000000000006548 123.0
BYD1_k127_9987912_5 STAS domain - - - 0.0000000000000000004607 91.0
BYD1_k127_9987912_6 - - - - 0.000004541 57.0