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Overview

ID MAG00052
Name BYD1_bin.73
Sample SMP0001
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Rhodocyclaceae
Genus Fen-999
Species
Assembly information
Completeness (%) 88.68
Contamination (%) 5.64
GC content (%) 65.0
N50 (bp) 21,436
Genome size (bp) 3,412,250

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3391

Gene name Description KEGG GOs EC E-value Score Sequence
BYD1_k127_10069729_0 Sulfate transporter antisigma-factor antagonist STAS - - - 1.641e-293 915.0
BYD1_k127_10069729_1 Proton-conducting membrane transporter - - - 4.606e-282 887.0
BYD1_k127_10069729_2 Sulfate transporter antisigma-factor antagonist STAS - - - 4.393e-265 827.0
BYD1_k127_10069729_3 Sigma-54 interaction domain - - - 1.501e-237 744.0
BYD1_k127_10069729_4 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 516.0
BYD1_k127_10069729_5 NADH dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 470.0
BYD1_k127_10069729_6 hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 301.0
BYD1_k127_10069729_8 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 0.00005007 50.0
BYD1_k127_10103684_0 Asparagine synthase - - - 1.478e-276 864.0
BYD1_k127_10103684_1 alcohol dehydrogenase - - - 3.736e-269 846.0
BYD1_k127_10103684_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001449 516.0
BYD1_k127_10103684_11 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 495.0
BYD1_k127_10103684_12 COG2089 Sialic acid synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 433.0
BYD1_k127_10103684_13 Heparinase II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 436.0
BYD1_k127_10103684_14 transferase activity, transferring glycosyl groups - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 419.0
BYD1_k127_10103684_15 Belongs to the GST superfamily K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006437 400.0
BYD1_k127_10103684_16 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008217 387.0
BYD1_k127_10103684_17 Cytochrome C1 K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 361.0
BYD1_k127_10103684_18 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 357.0
BYD1_k127_10103684_19 HDOD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 326.0
BYD1_k127_10103684_2 Domain of unknown function (DUF4131) K02238 - - 6.979e-256 811.0
BYD1_k127_10103684_20 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002471 316.0
BYD1_k127_10103684_21 NAD(P)H-binding K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000262 324.0
BYD1_k127_10103684_22 Bacterial sugar transferase K13012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 312.0
BYD1_k127_10103684_23 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 308.0
BYD1_k127_10103684_24 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000202 303.0
BYD1_k127_10103684_25 Glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 293.0
BYD1_k127_10103684_26 NAD(P)H-binding K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000004493 268.0
BYD1_k127_10103684_27 protein conserved in bacteria K09928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002626 243.0
BYD1_k127_10103684_28 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000002422 231.0
BYD1_k127_10103684_29 binds to the 23S rRNA K02939 - - 0.00000000000000000000000000000000000000000000000000000000000000684 218.0
BYD1_k127_10103684_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 5.777e-250 774.0
BYD1_k127_10103684_30 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000003623 203.0
BYD1_k127_10103684_31 Cytidylyltransferase - - - 0.000000000000000000000000000000000000000000000000002542 190.0
BYD1_k127_10103684_32 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000001769 175.0
BYD1_k127_10103684_33 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.000000000000000000000000000000000000000005602 155.0
BYD1_k127_10103684_34 stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000005229 150.0
BYD1_k127_10103684_35 glycosyl transferase family 8 - - - 0.000000000000000000000000000000000118 145.0
BYD1_k127_10103684_36 transferase activity, transferring glycosyl groups K07011,K20444 - - 0.00000000000000000000000000000003889 140.0
BYD1_k127_10103684_37 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000001123 141.0
BYD1_k127_10103684_38 Methyltransferase domain - - - 0.00000000000000000000000001063 120.0
BYD1_k127_10103684_39 Binds single-stranded DNA at the primosome assembly site (PAS) K02686 - - 0.0000000000000000001148 92.0
BYD1_k127_10103684_4 CoA-binding domain - - - 7.805e-218 691.0
BYD1_k127_10103684_40 Nodulation protein S (NodS) - - - 0.000000000000000002691 93.0
BYD1_k127_10103684_41 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000002066 82.0
BYD1_k127_10103684_42 Caenorhabditis protein of unknown function, DUF268 - - - 0.000000000000001259 87.0
BYD1_k127_10103684_43 Methionine biosynthesis protein MetW K20444 - - 0.000000001428 70.0
BYD1_k127_10103684_45 LTXXQ motif family protein - - - 0.0000271 53.0
BYD1_k127_10103684_5 GDP-mannose 4,6 dehydratase - - - 1.99e-208 651.0
BYD1_k127_10103684_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.494e-199 634.0
BYD1_k127_10103684_7 UDP-N-acetylglucosamine 2-epimerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000131 583.0
BYD1_k127_10103684_8 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 558.0
BYD1_k127_10103684_9 GDP-mannose 4,6 dehydratase K02377 - 1.1.1.271 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 506.0
BYD1_k127_1023450_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1369.0
BYD1_k127_1023450_1 Elongator protein 3, MiaB family, Radical SAM - - - 3.322e-320 989.0
BYD1_k127_1023450_10 transferase activity, transferring glycosyl groups K13659 - 2.4.1.264 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001267 511.0
BYD1_k127_1023450_11 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005763 528.0
BYD1_k127_1023450_12 Glycosyltransferase Family 4 K13657 - 2.4.1.252 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003485 471.0
BYD1_k127_1023450_13 Rhomboid family K19225 - 3.4.21.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002337 463.0
BYD1_k127_1023450_14 Domain of unknown function (DUF3391) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 454.0
BYD1_k127_1023450_15 - K13662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 452.0
BYD1_k127_1023450_16 Transmembrane exosortase (Exosortase_EpsH) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 418.0
BYD1_k127_1023450_17 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002235 426.0
BYD1_k127_1023450_18 organic phosphonate transport K02044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 390.0
BYD1_k127_1023450_19 Prokaryotic cytochrome b561 K00127 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006296 363.0
BYD1_k127_1023450_2 Elongation factor SelB, winged helix K03833 - - 2.098e-274 859.0
BYD1_k127_1023450_20 AAA domain K08252,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 366.0
BYD1_k127_1023450_21 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 359.0
BYD1_k127_1023450_22 TIGRFAM peptidyl-prolyl cis-trans isomerase, EpsD family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006017 333.0
BYD1_k127_1023450_23 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009171 323.0
BYD1_k127_1023450_24 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 323.0
BYD1_k127_1023450_25 Necessary for formate dehydrogenase activity K02380 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 311.0
BYD1_k127_1023450_26 Glycosyltransferase sugar-binding region containing DXD motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 287.0
BYD1_k127_1023450_27 Glycosyltransferase family 25 (LPS biosynthesis protein) K07270 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006389 267.0
BYD1_k127_1023450_29 Protein of unknown function (DUF3485) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005103 252.0
BYD1_k127_1023450_3 Acyltransferase family - - - 1.338e-241 766.0
BYD1_k127_1023450_30 COG0463 Glycosyltransferases involved in cell wall biogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000187 258.0
BYD1_k127_1023450_31 Glycosyl transferase WecB/TagA/CpsF family K05946,K13660 - 2.4.1.187 0.00000000000000000000000000000000000000000000000000000000000000000000001444 249.0
BYD1_k127_1023450_32 chemotaxis K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000001509 244.0
BYD1_k127_1023450_33 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.000000000000000000000000000000000000000000000000000000000002657 215.0
BYD1_k127_1023450_34 - - - - 0.00000000000000000000000000000000000000000000000000009794 196.0
BYD1_k127_1023450_35 Glycine cleavage H-protein - - - 0.0000000000000000000000000000000000000000000000000002048 188.0
BYD1_k127_1023450_36 MreB/Mbl protein K03569 - - 0.000000000000000000000000000000000000000000000000008941 184.0
BYD1_k127_1023450_38 Bacterial extracellular solute-binding proteins, family 3 - - - 0.0000000000000000000000000000000000000000001654 170.0
BYD1_k127_1023450_39 Regulator of competence-specific genes - - - 0.00000000000000000000000000000000000002145 146.0
BYD1_k127_1023450_4 Pyridine nucleotide-disulphide oxidoreductase - - - 1.117e-217 683.0
BYD1_k127_1023450_40 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000000000000302 145.0
BYD1_k127_1023450_41 Bacterial extracellular solute-binding proteins, family 3 K02030 - - 0.00000000000000000000000000000000007071 144.0
BYD1_k127_1023450_42 Cache_2 - - - 0.000000000000000000000000000002837 125.0
BYD1_k127_1023450_43 DsrE/DsrF-like family - - - 0.0000000000000000000000000000502 120.0
BYD1_k127_1023450_44 - - - - 0.000000000000000000000001728 106.0
BYD1_k127_1023450_45 Dodecin K09165 - - 0.000000000000000000000002473 108.0
BYD1_k127_1023450_46 TIGRFAM exopolysaccharide biosynthesis operon protein EpsL - - - 0.00000000000000002986 85.0
BYD1_k127_1023450_48 N-terminal 7TM region of histidine kinase - - - 0.0001959 44.0
BYD1_k127_1023450_5 Selenocysteine synthase N terminal K01042 - 2.9.1.1 9.183e-210 661.0
BYD1_k127_1023450_6 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase, WcaJ K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 591.0
BYD1_k127_1023450_7 Histidine Phosphotransfer domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001673 576.0
BYD1_k127_1023450_8 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003617 558.0
BYD1_k127_1023450_9 Formate dehydrogenase N, transmembrane K00124 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004827 547.0
BYD1_k127_10262181_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1255.0
BYD1_k127_10262181_1 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 1.895e-297 934.0
BYD1_k127_10262181_10 Class II aldolase adducin family protein K01628 - 4.1.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007367 291.0
BYD1_k127_10262181_11 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.000000000000000000000000000000000000000000000000000000000000000000004933 243.0
BYD1_k127_10262181_12 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000001762 225.0
BYD1_k127_10262181_13 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000001237 217.0
BYD1_k127_10262181_14 - - - - 0.000000000000000000000000000000003428 141.0
BYD1_k127_10262181_15 KTSC domain - - - 0.00000000000000000000000000001154 123.0
BYD1_k127_10262181_16 Protein of unknown function (DUF721) - - - 0.000000000000000003173 92.0
BYD1_k127_10262181_17 - - - - 0.0000002746 62.0
BYD1_k127_10262181_18 Cell wall formation K00075 - 1.3.1.98 0.0005102 43.0
BYD1_k127_10262181_2 Diguanylate cyclase - - - 3.864e-212 691.0
BYD1_k127_10262181_3 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005975 563.0
BYD1_k127_10262181_4 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004509 557.0
BYD1_k127_10262181_5 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004925 496.0
BYD1_k127_10262181_6 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009726 468.0
BYD1_k127_10262181_7 D-ala D-ala ligase N-terminus K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008874 431.0
BYD1_k127_10262181_8 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 397.0
BYD1_k127_10262181_9 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000121 303.0
BYD1_k127_10315248_0 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 3.708e-248 771.0
BYD1_k127_10315248_1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 570.0
BYD1_k127_10315248_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.00000000000000000000000000000000000000000000000000000000000002056 216.0
BYD1_k127_10315248_11 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.000000000000000000000000000000000000000000000000000000000002005 210.0
BYD1_k127_10315248_12 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000000000004211 209.0
BYD1_k127_10315248_13 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000002488 196.0
BYD1_k127_10315248_14 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.000000000000000000000000000000000000000000000000007103 181.0
BYD1_k127_10315248_15 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.000000000000000000000000000000000000000000000008322 173.0
BYD1_k127_10315248_16 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.000000000000000000000000000000000000000000003279 166.0
BYD1_k127_10315248_17 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000000000002748 144.0
BYD1_k127_10315248_18 Ribosomal protein L30 K02907 - - 0.00000000000000000000000004715 107.0
BYD1_k127_10315248_19 Ribosomal protein L36 K02919 - - 0.0000000000002371 71.0
BYD1_k127_10315248_2 AAA domain, putative AbiEii toxin, Type IV TA system K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 453.0
BYD1_k127_10315248_3 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 372.0
BYD1_k127_10315248_4 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 331.0
BYD1_k127_10315248_5 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009088 277.0
BYD1_k127_10315248_6 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002754 262.0
BYD1_k127_10315248_7 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002374 244.0
BYD1_k127_10315248_8 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000000004226 235.0
BYD1_k127_10315248_9 binds to the 23S rRNA K02876 - - 0.000000000000000000000000000000000000000000000000000000000000007207 219.0
BYD1_k127_1045617_0 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 501.0
BYD1_k127_1045617_1 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 478.0
BYD1_k127_1045617_2 ABC transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 292.0
BYD1_k127_10501271_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 2504.0
BYD1_k127_10501271_1 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1847.0
BYD1_k127_10501271_10 ATPase (AAA K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 405.0
BYD1_k127_10501271_11 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001704 355.0
BYD1_k127_10501271_12 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002098 317.0
BYD1_k127_10501271_13 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 306.0
BYD1_k127_10501271_14 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002244 290.0
BYD1_k127_10501271_15 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001269 269.0
BYD1_k127_10501271_16 FMN_bind K03612 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000539 264.0
BYD1_k127_10501271_17 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.000000000000000000000000000000000000000000000000000000000000000000000000085 255.0
BYD1_k127_10501271_18 PFAM Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000002678 91.0
BYD1_k127_10501271_19 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000001045 81.0
BYD1_k127_10501271_2 Acetokinase family - - - 1.163e-234 749.0
BYD1_k127_10501271_20 - - - - 0.00000224 58.0
BYD1_k127_10501271_21 PEP-CTERM motif - - - 0.0001661 52.0
BYD1_k127_10501271_3 Ammonium Transporter Family K03320,K06580 - - 1.282e-226 707.0
BYD1_k127_10501271_4 Part of a membrane complex involved in electron transport K03615 - - 5.908e-226 707.0
BYD1_k127_10501271_5 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 7.007e-220 687.0
BYD1_k127_10501271_6 Part of a membrane complex involved in electron transport K03614 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002996 602.0
BYD1_k127_10501271_7 Ubiquinone biosynthesis hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004263 484.0
BYD1_k127_10501271_8 Membrane-bound lytic murein transglycosylase K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 462.0
BYD1_k127_10501271_9 Fe-S cluster K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 421.0
BYD1_k127_10534933_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 2.09e-231 734.0
BYD1_k127_10534933_1 - - - - 5.17e-202 633.0
BYD1_k127_10534933_2 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009748 480.0
BYD1_k127_10534933_3 glutamine synthetase K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000002253 247.0
BYD1_k127_10534933_4 Peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000002282 233.0
BYD1_k127_10534933_5 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000006841 236.0
BYD1_k127_10534933_6 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000001536 216.0
BYD1_k127_10534933_7 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.00000000000000000000000000000000000003176 149.0
BYD1_k127_10534933_8 Domain of unknown function (DUF4124) - - - 0.0000000000000000000000000000000331 132.0
BYD1_k127_10534933_9 Cytochrome c - - - 0.00000000000000000004985 94.0
BYD1_k127_10545235_0 COG4231 Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits K04090 - 1.2.7.8 0.0 1605.0
BYD1_k127_10545235_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1241.0
BYD1_k127_10545235_10 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.061e-240 748.0
BYD1_k127_10545235_11 RecB family exonuclease K01144 - 3.1.11.5 6.115e-235 754.0
BYD1_k127_10545235_12 Diguanylate cyclase - - - 9.568e-229 746.0
BYD1_k127_10545235_13 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 3.025e-209 659.0
BYD1_k127_10545235_14 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001431 582.0
BYD1_k127_10545235_15 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000223 564.0
BYD1_k127_10545235_16 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005388 565.0
BYD1_k127_10545235_17 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 563.0
BYD1_k127_10545235_18 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 563.0
BYD1_k127_10545235_19 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002873 544.0
BYD1_k127_10545235_2 His Kinase A (phospho-acceptor) domain - - - 0.0 1240.0
BYD1_k127_10545235_20 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003785 510.0
BYD1_k127_10545235_21 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 503.0
BYD1_k127_10545235_22 Putative nucleotidyltransferase substrate binding domain K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006284 511.0
BYD1_k127_10545235_23 RmuC family K09760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 463.0
BYD1_k127_10545235_24 5'-nucleotidase K01081 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 454.0
BYD1_k127_10545235_25 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 439.0
BYD1_k127_10545235_26 pfkB family carbohydrate kinase K21344 - 2.7.1.167 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 431.0
BYD1_k127_10545235_27 cheY-homologous receiver domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003987 428.0
BYD1_k127_10545235_28 SMART cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002159 373.0
BYD1_k127_10545235_29 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 372.0
BYD1_k127_10545235_3 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1211.0
BYD1_k127_10545235_30 Prephenate dehydrogenase K04517 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009673 368.0
BYD1_k127_10545235_31 Solute carrier family 35 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005596 357.0
BYD1_k127_10545235_32 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 327.0
BYD1_k127_10545235_33 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004866 319.0
BYD1_k127_10545235_34 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 318.0
BYD1_k127_10545235_35 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 322.0
BYD1_k127_10545235_36 ferredoxin--nadp reductase K00528 - 1.18.1.2,1.19.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 294.0
BYD1_k127_10545235_37 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006787 287.0
BYD1_k127_10545235_38 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001308 277.0
BYD1_k127_10545235_39 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003964 265.0
BYD1_k127_10545235_4 Belongs to the helicase family. UvrD subfamily - - - 0.0 1056.0
BYD1_k127_10545235_40 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001274 260.0
BYD1_k127_10545235_41 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004501 244.0
BYD1_k127_10545235_42 HAD-hyrolase-like K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000000003692 232.0
BYD1_k127_10545235_43 UPF0114 protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004774 228.0
BYD1_k127_10545235_44 - - - - 0.00000000000000000000000000000000000000000000000000000000000000004982 229.0
BYD1_k127_10545235_45 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000006194 226.0
BYD1_k127_10545235_46 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000000000000000286 203.0
BYD1_k127_10545235_47 ParE toxin of type II toxin-antitoxin system, parDE K19092 - - 0.00000000000000000000000000000000000000000000000003051 182.0
BYD1_k127_10545235_48 - - - - 0.0000000000000000000000000000000000000000000000002391 188.0
BYD1_k127_10545235_49 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000000000000000001102 172.0
BYD1_k127_10545235_5 DNA polymerase III K02342 - 2.7.7.7 3.527e-315 982.0
BYD1_k127_10545235_51 - - - - 0.000000000000000000000000000000001227 139.0
BYD1_k127_10545235_52 DsrC like protein K11179 - - 0.00000000000000000000000000000000276 134.0
BYD1_k127_10545235_53 transcriptional regulators containing the CopG Arc MetJ DNA-binding domain K07746 - - 0.000000000000000000000000000007233 119.0
BYD1_k127_10545235_54 COG0834 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.00000000000000000000000005116 119.0
BYD1_k127_10545235_55 BolA-like protein K05527 - - 0.00000000000000000001041 95.0
BYD1_k127_10545235_56 - - - - 0.0000000000000001785 82.0
BYD1_k127_10545235_57 - - - - 0.00000000001654 68.0
BYD1_k127_10545235_58 Lipopolysaccharide assembly protein A domain K08992 - - 0.00000000008326 66.0
BYD1_k127_10545235_59 - - - - 0.00006941 51.0
BYD1_k127_10545235_6 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 4.614e-312 963.0
BYD1_k127_10545235_7 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 6.512e-309 949.0
BYD1_k127_10545235_8 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 - 2.5.1.19 6.397e-292 908.0
BYD1_k127_10545235_9 His Kinase A (phosphoacceptor) domain - - - 3.097e-269 838.0
BYD1_k127_105454_0 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 336.0
BYD1_k127_105454_1 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000005765 223.0
BYD1_k127_105454_2 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.000001356 51.0
BYD1_k127_10562679_0 glutamate--cysteine ligase K01919 - 6.3.2.2 2.979e-215 674.0
BYD1_k127_10562679_1 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000001076 232.0
BYD1_k127_10562679_2 Eco57I restriction-modification methylase K07317 - 2.1.1.72 0.00000000000000000000000000000000000000000000001401 173.0
BYD1_k127_10616661_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 361.0
BYD1_k127_10616661_1 coenzyme F390 K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000006981 242.0
BYD1_k127_10616661_2 PFAM GGDEF domain containing protein - - - 0.00000000000000000000000000000001219 139.0
BYD1_k127_10649090_0 Asparaginase K01424,K05597 - 3.5.1.1,3.5.1.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 544.0
BYD1_k127_10649090_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006638 408.0
BYD1_k127_10649090_2 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000006093 202.0
BYD1_k127_10649090_3 Bacterial periplasmic substrate-binding proteins K10001 - - 0.0000000000000000000000003675 108.0
BYD1_k127_10763991_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 400.0
BYD1_k127_10763991_1 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 302.0
BYD1_k127_10763991_2 Pfam Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007523 299.0
BYD1_k127_10763991_3 nitrogen fixation K02593 - - 0.0000000000000000000000000000001572 124.0
BYD1_k127_10763991_4 4Fe-4S binding domain - - - 0.00000000000000000000000001244 121.0
BYD1_k127_10763991_5 - - - - 0.0000000001139 69.0
BYD1_k127_10763991_6 Histidine kinase K02484 - 2.7.13.3 0.00003188 47.0
BYD1_k127_10764416_0 Chemotaxis - - - 8.231e-277 865.0
BYD1_k127_10764416_1 TIGRFAM fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002861 574.0
BYD1_k127_10764416_2 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 539.0
BYD1_k127_10764416_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008442 408.0
BYD1_k127_10764416_4 Hydrogenase accessory protein HypB K04652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 369.0
BYD1_k127_10764416_5 HD domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004161 389.0
BYD1_k127_10764416_6 Hydrogenase/urease nickel incorporation, metallochaperone, hypA K04651 - - 0.0000000000000000000000000000000000000000000005641 170.0
BYD1_k127_10769979_0 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.0 1071.0
BYD1_k127_10769979_1 Cytochrome C and Quinol oxidase polypeptide I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 513.0
BYD1_k127_10769979_10 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000005298 143.0
BYD1_k127_10769979_11 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000001565 151.0
BYD1_k127_10769979_12 signal sequence binding K07152 - - 0.000000000000000000000000000000001114 140.0
BYD1_k127_10769979_13 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000000000000000000005107 140.0
BYD1_k127_10769979_14 amine dehydrogenase activity - - - 0.00000000000003008 88.0
BYD1_k127_10769979_2 Belongs to the heme-copper respiratory oxidase family K02274 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001577 513.0
BYD1_k127_10769979_3 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002216 394.0
BYD1_k127_10769979_4 protein required for cytochrome oxidase assembly K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005855 332.0
BYD1_k127_10769979_5 response regulator K14979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001874 254.0
BYD1_k127_10769979_6 cytochrome c oxidase, subunit III K02276 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944 1.9.3.1 0.0000000000000000000000000000000000000000000003807 176.0
BYD1_k127_10769979_7 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000003065 161.0
BYD1_k127_10769979_8 PFAM cytochrome c - - - 0.00000000000000000000000000000000000000008121 160.0
BYD1_k127_10769979_9 Type II secretory pathway pseudopilin - - - 0.00000000000000000000000000000000000003182 147.0
BYD1_k127_10808018_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1117.0
BYD1_k127_10808018_1 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.0 1048.0
BYD1_k127_10808018_10 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001916 499.0
BYD1_k127_10808018_11 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 473.0
BYD1_k127_10808018_12 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002142 461.0
BYD1_k127_10808018_13 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 441.0
BYD1_k127_10808018_14 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005642 414.0
BYD1_k127_10808018_15 Belongs to the protein N5-glutamine methyltransferase family K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006418 398.0
BYD1_k127_10808018_16 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 364.0
BYD1_k127_10808018_17 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001198 308.0
BYD1_k127_10808018_18 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 311.0
BYD1_k127_10808018_19 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K06879,K09457 - 1.7.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000737 253.0
BYD1_k127_10808018_2 GTP-binding protein TypA K06207 - - 0.0 1023.0
BYD1_k127_10808018_20 phosphoribosyltransferase K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000007391 242.0
BYD1_k127_10808018_21 (Lipo)protein - - - 0.00000000000000000000000000000000000000000000000000000002602 200.0
BYD1_k127_10808018_22 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000001713 113.0
BYD1_k127_10808018_23 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000009577 84.0
BYD1_k127_10808018_24 - - - - 0.00000000000003287 81.0
BYD1_k127_10808018_25 - - - - 0.00000000008102 63.0
BYD1_k127_10808018_3 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 5.048e-303 947.0
BYD1_k127_10808018_4 Elongator protein 3, MiaB family, Radical SAM - - - 2.866e-268 831.0
BYD1_k127_10808018_5 Carbamoyltransferase C-terminus K00612 - - 9.297e-260 811.0
BYD1_k127_10808018_6 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 1.244e-213 669.0
BYD1_k127_10808018_7 twitching motility protein K02670 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 575.0
BYD1_k127_10808018_8 PFAM Aminotransferase class I and II K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 574.0
BYD1_k127_10808018_9 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008974 564.0
BYD1_k127_10821612_0 glutamate synthase, alpha subunit domain protein K00265 - 1.4.1.13,1.4.1.14 0.0 2239.0
BYD1_k127_10821612_1 COG0480 Translation elongation factors (GTPases) K02355 - - 0.0 1049.0
BYD1_k127_10821612_10 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 476.0
BYD1_k127_10821612_11 PFAM Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 416.0
BYD1_k127_10821612_12 Pilus assembly protein PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008124 279.0
BYD1_k127_10821612_13 fimbrial biogenesis protein PilN K02663 - - 0.0000000000000000000000000000000000000000000000000000000000000000006332 233.0
BYD1_k127_10821612_14 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 - 2.7.1.71 0.00000000000000000000000000000000000000000000000000000000000000005574 226.0
BYD1_k127_10821612_15 pilus assembly protein PilP K02665 - - 0.00000000000000000000000000000000000000000000000000003099 193.0
BYD1_k127_10821612_16 Copper binding periplasmic protein CusF K07810 - - 0.0000000000001209 78.0
BYD1_k127_10821612_2 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 1.852e-262 820.0
BYD1_k127_10821612_3 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 5.262e-261 810.0
BYD1_k127_10821612_4 Type 4 fimbrial biogenesis protein K02666 - - 1.294e-218 704.0
BYD1_k127_10821612_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07787 - - 2.183e-216 679.0
BYD1_k127_10821612_6 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 3.912e-202 637.0
BYD1_k127_10821612_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07798 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004364 596.0
BYD1_k127_10821612_8 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004607 511.0
BYD1_k127_10821612_9 Pilus assembly protein K02662 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002224 506.0
BYD1_k127_11005600_0 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 383.0
BYD1_k127_11005600_1 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001436 360.0
BYD1_k127_11005600_2 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002431 328.0
BYD1_k127_11005600_3 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007137 276.0
BYD1_k127_11005600_4 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000000000000000000000000000000000000000000007255 170.0
BYD1_k127_11031604_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005002 446.0
BYD1_k127_11031604_1 cb-type cytochrome c oxidase subunit III - - - 0.00000000000000000000000000000000000000003065 161.0
BYD1_k127_11069068_0 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 5.29e-214 671.0
BYD1_k127_11069068_1 AcyL-CoA dehydrogenase K06445 - - 0.000000000000000000000000000000000000000000000000000000000000000001149 230.0
BYD1_k127_11086195_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 2.833e-299 925.0
BYD1_k127_11086195_1 Belongs to the monovalent cation proton antiporter 2 (cpa2) transporter (TC 2.A.37) family K03455 - - 1.209e-219 699.0
BYD1_k127_11086195_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003776 346.0
BYD1_k127_11086195_11 VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001085 311.0
BYD1_k127_11086195_12 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001533 298.0
BYD1_k127_11086195_13 Prokaryotic N-terminal methylation motif - - - 0.000000000000000000000000000000000000000000000000000000000000000000000917 243.0
BYD1_k127_11086195_14 Phasin protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000005653 239.0
BYD1_k127_11086195_15 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.000000000000000000000000000000000000000000000000000000000000000009536 229.0
BYD1_k127_11086195_16 - - - - 0.0000000000000000000000000000000000000000000000000000000002091 232.0
BYD1_k127_11086195_17 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000008871 215.0
BYD1_k127_11086195_18 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000000002117 196.0
BYD1_k127_11086195_19 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000000000000000000000000000000000000000008576 198.0
BYD1_k127_11086195_2 Type II and III secretion system protein K02453 - - 9.688e-213 677.0
BYD1_k127_11086195_20 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000003515 195.0
BYD1_k127_11086195_21 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000002715 197.0
BYD1_k127_11086195_22 - - - - 0.0000000000000000000000000000000000001721 146.0
BYD1_k127_11086195_23 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000000000002305 155.0
BYD1_k127_11086195_24 - - - - 0.000000000000000000000000000000001377 138.0
BYD1_k127_11086195_25 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.00000000000000000000000000002234 127.0
BYD1_k127_11086195_26 - - - - 0.00000000000000005788 89.0
BYD1_k127_11086195_3 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 570.0
BYD1_k127_11086195_4 type II secretion system protein K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 527.0
BYD1_k127_11086195_5 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004776 431.0
BYD1_k127_11086195_6 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 407.0
BYD1_k127_11086195_7 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 422.0
BYD1_k127_11086195_8 abc transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002457 406.0
BYD1_k127_11086195_9 AAA domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000449 410.0
BYD1_k127_11145141_0 Bifunctional enoyl-CoA hydratase phosphate acetyltransferase K00625 - 2.3.1.8 3.69e-205 649.0
BYD1_k127_11145141_1 GGDEF domain K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003001 537.0
BYD1_k127_11145141_10 maturation - - - 0.0000000000000000000000000000000000000000000000000000006969 196.0
BYD1_k127_11145141_11 OmpA family K03286 - - 0.000000000000000000000000000000000000000000000001638 182.0
BYD1_k127_11145141_12 Protein of unknown function (DUF563) - - - 0.000000000000000000000000009719 128.0
BYD1_k127_11145141_13 Acetyltransferase (GNAT) domain - - - 0.00000000000000246 81.0
BYD1_k127_11145141_14 Tetratricopeptide repeat - - - 0.0000013 62.0
BYD1_k127_11145141_2 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000176 505.0
BYD1_k127_11145141_3 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 430.0
BYD1_k127_11145141_4 beta-fructofuranosidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 373.0
BYD1_k127_11145141_5 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 318.0
BYD1_k127_11145141_6 cyclopropane-fatty-acyl-phospholipid synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 319.0
BYD1_k127_11145141_7 Bacterial transferase hexapeptide (six repeats) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 292.0
BYD1_k127_11145141_8 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001486 293.0
BYD1_k127_11145141_9 Catalyzes the synthesis of activated sulfate K00860 - 2.7.1.25 0.00000000000000000000000000000000000000000000000000000000000000000005857 236.0
BYD1_k127_11249535_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1101.0
BYD1_k127_11249535_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1037.0
BYD1_k127_11249535_10 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001231 451.0
BYD1_k127_11249535_11 signal peptide peptidase K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001562 447.0
BYD1_k127_11249535_12 malonyl CoA-acyl carrier protein transacylase K00645 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 431.0
BYD1_k127_11249535_13 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 426.0
BYD1_k127_11249535_14 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000123 419.0
BYD1_k127_11249535_15 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 407.0
BYD1_k127_11249535_16 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 381.0
BYD1_k127_11249535_17 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005198 346.0
BYD1_k127_11249535_18 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005132 328.0
BYD1_k127_11249535_19 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005839 317.0
BYD1_k127_11249535_2 diguanylate cyclase - - - 1.532e-300 951.0
BYD1_k127_11249535_20 Haloacid dehalogenase-like hydrolase K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 296.0
BYD1_k127_11249535_21 Sigma E regulatory protein, MucB RseB K03598 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008704 291.0
BYD1_k127_11249535_22 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005005 280.0
BYD1_k127_11249535_23 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001658 274.0
BYD1_k127_11249535_24 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000005137 259.0
BYD1_k127_11249535_25 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005893 259.0
BYD1_k127_11249535_26 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000319 262.0
BYD1_k127_11249535_27 uracil-DNA glycosylase K21929 - 3.2.2.27 0.0000000000000000000000000000000000000000000000000000000000000000000000001832 256.0
BYD1_k127_11249535_28 Tetrapyrrole (Corrin/Porphyrin) Methylases K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000004039 250.0
BYD1_k127_11249535_29 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.0000000000000000000000000000000000000000001728 165.0
BYD1_k127_11249535_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 1.796e-270 851.0
BYD1_k127_11249535_30 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000000000000000000000000000008712 140.0
BYD1_k127_11249535_31 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.000000000000000000000000000007774 119.0
BYD1_k127_11249535_32 Glutaredoxin-like domain (DUF836) - - - 0.0000000000000000000000000009088 114.0
BYD1_k127_11249535_33 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000000000000006509 116.0
BYD1_k127_11249535_34 Domain of unknown function (DUF4845) - - - 0.00000000000000000000000003818 113.0
BYD1_k127_11249535_35 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.000000000000000003118 84.0
BYD1_k127_11249535_36 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.00000000000001018 81.0
BYD1_k127_11249535_37 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000003508 60.0
BYD1_k127_11249535_39 Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins K19168 - - 0.0000002079 59.0
BYD1_k127_11249535_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 3.79e-236 736.0
BYD1_k127_11249535_5 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 7.525e-227 718.0
BYD1_k127_11249535_6 Belongs to the peptidase S1C family K04771 - 3.4.21.107 1.866e-207 661.0
BYD1_k127_11249535_7 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004242 480.0
BYD1_k127_11249535_8 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004057 471.0
BYD1_k127_11249535_9 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002019 470.0
BYD1_k127_11274517_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 1.185e-233 727.0
BYD1_k127_11274517_1 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000333 589.0
BYD1_k127_11274517_2 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001579 362.0
BYD1_k127_11281235_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.987e-274 859.0
BYD1_k127_11281235_1 Collagenase K08303 - - 1.893e-258 813.0
BYD1_k127_11281235_2 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 1.609e-233 746.0
BYD1_k127_11281235_3 HEAT repeats - - - 0.00000000000000000000000000000000000001248 148.0
BYD1_k127_11281235_4 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000001787 123.0
BYD1_k127_11300569_0 Oligopeptidase K01414 - 3.4.24.70 0.0 1045.0
BYD1_k127_11300569_1 Transcriptional activator of acetoin glycerol metabolism K21405 - - 5.258e-287 894.0
BYD1_k127_11300569_10 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009418 474.0
BYD1_k127_11300569_11 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002415 456.0
BYD1_k127_11300569_12 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000341 411.0
BYD1_k127_11300569_13 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007557 394.0
BYD1_k127_11300569_14 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404 361.0
BYD1_k127_11300569_15 UbiH UbiF VisC COQ6 family K03185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003037 350.0
BYD1_k127_11300569_16 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 308.0
BYD1_k127_11300569_17 Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002006 299.0
BYD1_k127_11300569_18 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000006534 210.0
BYD1_k127_11300569_19 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000599 179.0
BYD1_k127_11300569_2 aldehyde ferredoxin oxidoreductase activity K03738 - 1.2.7.5 7.774e-265 820.0
BYD1_k127_11300569_20 Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors K12973 - 2.3.1.251 0.00000000000000000000000000000000000000001388 162.0
BYD1_k127_11300569_21 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000000000000001383 149.0
BYD1_k127_11300569_23 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000001029 125.0
BYD1_k127_11300569_24 Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second- messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a - - - 0.0000000000000000000000000002355 117.0
BYD1_k127_11300569_25 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000008765 107.0
BYD1_k127_11300569_26 Belongs to the transcriptional regulatory Fis family K03557 - - 0.000000000000000000000005759 115.0
BYD1_k127_11300569_27 Mo-molybdopterin cofactor metabolic process - - - 0.0005852 48.0
BYD1_k127_11300569_3 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 4.632e-255 796.0
BYD1_k127_11300569_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 2.06e-253 801.0
BYD1_k127_11300569_5 aminopeptidase K01262 - 3.4.11.9 3.339e-202 638.0
BYD1_k127_11300569_6 Histidine Phosphotransfer domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001065 611.0
BYD1_k127_11300569_7 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006451 542.0
BYD1_k127_11300569_8 Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities K14155 - 4.4.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002531 520.0
BYD1_k127_11300569_9 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 493.0
BYD1_k127_11305601_0 DNA topoisomerase III K03169 - 5.99.1.2 1.725e-271 846.0
BYD1_k127_11305601_1 Rossmann fold nucleotide-binding protein involved in DNA uptake K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 425.0
BYD1_k127_11305601_2 protein containing LysM domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005628 364.0
BYD1_k127_11305601_3 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000000007985 146.0
BYD1_k127_11354733_0 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00833 - 2.6.1.62 1.071e-198 627.0
BYD1_k127_11354733_1 Methyl-accepting chemotaxis protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008726 595.0
BYD1_k127_11354733_10 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000000000000000000000000000002256 217.0
BYD1_k127_11354733_11 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000005172 215.0
BYD1_k127_11354733_12 Thioesterase domain K02170 - 3.1.1.85 0.0000000000000000000000000000000000000005307 156.0
BYD1_k127_11354733_13 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000001612 129.0
BYD1_k127_11354733_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 530.0
BYD1_k127_11354733_3 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 494.0
BYD1_k127_11354733_4 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 471.0
BYD1_k127_11354733_5 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 439.0
BYD1_k127_11354733_6 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 349.0
BYD1_k127_11354733_7 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 306.0
BYD1_k127_11354733_8 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring K01935 - 6.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000001081 271.0
BYD1_k127_11354733_9 Thioredoxin-like domain K03672 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000006044 222.0
BYD1_k127_11395112_0 Heavy-metal-associated domain K17686 - 3.6.3.54 0.0 1080.0
BYD1_k127_11395112_1 TonB dependent receptor K02014 - - 2.901e-308 960.0
BYD1_k127_11395112_10 response regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 295.0
BYD1_k127_11395112_11 Cytochrome C biogenesis protein transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 294.0
BYD1_k127_11395112_12 NosL - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 289.0
BYD1_k127_11395112_13 TonB dependent receptor K02014,K16087,K16089,K16092 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009273 297.0
BYD1_k127_11395112_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000003343 246.0
BYD1_k127_11395112_15 lipoprotein involved in nitrous oxide reduction - - - 0.0000000000000000000000000000000000000000000000000000000000000000003313 236.0
BYD1_k127_11395112_16 Anti-feci sigma factor, fecr K07165 - - 0.0000000000000000000000000000000000000000000000000000000003667 214.0
BYD1_k127_11395112_17 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000005391 190.0
BYD1_k127_11395112_18 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000002458 184.0
BYD1_k127_11395112_19 ECF sigma factor K03088 - - 0.00000000000000000000000000000000000000000003564 166.0
BYD1_k127_11395112_2 Histidine kinase - - - 1.583e-217 691.0
BYD1_k127_11395112_20 - - - - 0.000000000000000000000000000000000000001803 156.0
BYD1_k127_11395112_21 RNA polymerase sigma K03089 - - 0.000000000000000000000000000000000002601 139.0
BYD1_k127_11395112_22 - - - - 0.0000000000000000000000000000000008355 133.0
BYD1_k127_11395112_23 - - - - 0.0000000000001747 83.0
BYD1_k127_11395112_24 - - - - 0.000000000002002 70.0
BYD1_k127_11395112_3 4Fe-4S single cluster domain - - - 9.696e-197 623.0
BYD1_k127_11395112_4 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 550.0
BYD1_k127_11395112_5 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002512 460.0
BYD1_k127_11395112_6 TonB dependent receptor K16087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 406.0
BYD1_k127_11395112_7 prohibitin homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005979 349.0
BYD1_k127_11395112_8 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003121 339.0
BYD1_k127_11395112_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003701 312.0
BYD1_k127_11400709_0 Belongs to the malate synthase family K01638 - 2.3.3.9 6.237e-274 850.0
BYD1_k127_11400709_1 Diguanylate cyclase - - - 2.966e-234 745.0
BYD1_k127_11400709_10 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.000000000000001959 91.0
BYD1_k127_11400709_2 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 494.0
BYD1_k127_11400709_3 COG1538 Outer membrane protein K12543 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 467.0
BYD1_k127_11400709_4 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 424.0
BYD1_k127_11400709_5 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 403.0
BYD1_k127_11400709_6 membrane protein, terc - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001054 267.0
BYD1_k127_11400709_7 periplasmic protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001866 235.0
BYD1_k127_11400709_8 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.0000000000000000000000000000001825 143.0
BYD1_k127_11400709_9 OmpA family K03286 - - 0.0000000000000000000000306 116.0
BYD1_k127_11404212_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K08352 - 1.8.5.5 8.138e-307 954.0
BYD1_k127_11404212_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007041 587.0
BYD1_k127_11404212_2 response to heat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004113 259.0
BYD1_k127_11404212_3 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000008279 256.0
BYD1_k127_11404212_4 response to heat K07090 - - 0.00000000000000000000000000000000000000000000000001162 184.0
BYD1_k127_11404212_5 membrane transporter protein K07090 - - 0.00001145 57.0
BYD1_k127_11423546_0 type II restriction enzyme, methylase - - - 0.0 1376.0
BYD1_k127_11423546_1 Glycosyltransferase family 20 K00697 - 2.4.1.15,2.4.1.347 0.0 1174.0
BYD1_k127_11423546_10 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001599 322.0
BYD1_k127_11423546_11 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 327.0
BYD1_k127_11423546_12 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000239 302.0
BYD1_k127_11423546_13 COG0474 Cation transport ATPase - - - 0.000000000000000000000000000000000000000000000000003397 186.0
BYD1_k127_11423546_14 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.000000000000000000000000000000555 124.0
BYD1_k127_11423546_15 Protein of unknown function (DUF3124) - - - 0.00000000000000000000000003375 118.0
BYD1_k127_11423546_16 Putative addiction module component - - - 0.00000000000007289 79.0
BYD1_k127_11423546_17 PFAM cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.0000004001 63.0
BYD1_k127_11423546_2 PFAM Glycoside hydrolase 15-related - - - 2.103e-319 984.0
BYD1_k127_11423546_3 Sodium/hydrogen exchanger family K03455 - - 4.778e-199 635.0
BYD1_k127_11423546_4 PFAM major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 587.0
BYD1_k127_11423546_5 Protein of unknown function (DUF475) K09799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001477 409.0
BYD1_k127_11423546_6 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000189 406.0
BYD1_k127_11423546_7 PFAM sodium hydrogen exchanger - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006857 402.0
BYD1_k127_11423546_8 LysR substrate binding domain K03717 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002354 373.0
BYD1_k127_11423546_9 Rhodanese Homology Domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 342.0
BYD1_k127_11676921_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1570.0
BYD1_k127_11676921_1 AcrB/AcrD/AcrF family - - - 0.0 1445.0
BYD1_k127_11676921_10 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 359.0
BYD1_k127_11676921_11 Chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003078 329.0
BYD1_k127_11676921_12 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 322.0
BYD1_k127_11676921_13 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002387 257.0
BYD1_k127_11676921_14 G T U mismatch-specific DNA glycosylase K03649 - 3.2.2.28 0.000000000000000000000000000000000000000000000000000000000000004407 220.0
BYD1_k127_11676921_15 Domain of unknown function (DUF1841) - - - 0.000000000000000000000000000000000000000000000000002334 185.0
BYD1_k127_11676921_16 Sulfurtransferase TusA - - - 0.00000000000000000000000000000000000000000000005062 174.0
BYD1_k127_11676921_17 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000000002835 165.0
BYD1_k127_11676921_18 addiction module antidote protein - - - 0.0000000000000000000000000000000000000000009522 158.0
BYD1_k127_11676921_19 addiction module killer protein - - - 0.0000000000000000000000000000000000000001054 153.0
BYD1_k127_11676921_2 Hsp90 protein K04079 - - 0.0 1046.0
BYD1_k127_11676921_20 - - - - 0.000000000000000000000000000000000000001224 153.0
BYD1_k127_11676921_21 DsrC like protein K11179 - - 0.00000000000000000000000000000000009567 136.0
BYD1_k127_11676921_22 Cas6 Crispr - - - 0.00000000000000000000000000000008456 132.0
BYD1_k127_11676921_23 - - - - 0.0000000000000000000004061 97.0
BYD1_k127_11676921_3 serine threonine protein kinase - - - 1.173e-303 951.0
BYD1_k127_11676921_4 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 1.068e-283 883.0
BYD1_k127_11676921_5 PLD-like domain K06132 - - 1.08e-201 638.0
BYD1_k127_11676921_6 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009082 507.0
BYD1_k127_11676921_7 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001089 496.0
BYD1_k127_11676921_8 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 504.0
BYD1_k127_11676921_9 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008827 387.0
BYD1_k127_11776524_0 Sulfite reductase K00381 - 1.8.1.2 3.951e-254 794.0
BYD1_k127_11776524_1 Transcriptional regulator, LysR family K13634,K13635 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006032 405.0
BYD1_k127_11776524_2 Reduction of activated sulfate into sulfite K00390 - 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005195 317.0
BYD1_k127_11776524_3 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000001944 259.0
BYD1_k127_11776524_4 Bacterial protein of unknown function (DUF934) - - - 0.000000000000000000000000000000000000000000000000000004492 197.0
BYD1_k127_11786397_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 1.155e-292 910.0
BYD1_k127_11786397_1 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 375.0
BYD1_k127_11786397_2 Chalcone isomerase-like - - - 0.00000000000000000000000000000000000000000000000000000000000186 215.0
BYD1_k127_11804108_0 PAC sensor-containing diguanylate cyclase phosphodiesterase - - - 0.0 1065.0
BYD1_k127_11804108_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 1.647e-244 759.0
BYD1_k127_11804108_10 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004116 356.0
BYD1_k127_11804108_11 Glutamine amidotransferase class-I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 316.0
BYD1_k127_11804108_12 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004895 321.0
BYD1_k127_11804108_13 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001908 283.0
BYD1_k127_11804108_14 Belongs to the UPF0502 family K09915 - - 0.000000000000000000000000000000000000000000000000000000000000000000000003203 265.0
BYD1_k127_11804108_15 Aspartyl protease K06985 - - 0.000000000000000000000000000000000000000000000000000000000001896 216.0
BYD1_k127_11804108_16 NUDIX domain - - - 0.00000000000000000000000000000000000000000000000000000000002836 212.0
BYD1_k127_11804108_17 Protein of unknown function (DUF1255) K09913 - 2.4.2.1,2.4.2.2 0.0000000000000000000000000000000000000000000000000005538 184.0
BYD1_k127_11804108_18 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000001259 163.0
BYD1_k127_11804108_19 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000003992 134.0
BYD1_k127_11804108_2 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 9.289e-216 672.0
BYD1_k127_11804108_20 diol metabolic process K01724 - 4.2.1.96 0.0000000000000000000000000000002052 126.0
BYD1_k127_11804108_21 Binds the 23S rRNA K02909 - - 0.0000000000000000000000000000003361 124.0
BYD1_k127_11804108_22 - - - - 0.0000000000000000000000000000367 124.0
BYD1_k127_11804108_23 Protein of unknown function (DUF2788) - - - 0.000000000000000000000000004636 112.0
BYD1_k127_11804108_3 Belongs to the thiolase family K00626 - 2.3.1.9 3.359e-209 655.0
BYD1_k127_11804108_4 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 568.0
BYD1_k127_11804108_5 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005299 554.0
BYD1_k127_11804108_6 Zn-dependent protease with chaperone function K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 514.0
BYD1_k127_11804108_7 COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003125 407.0
BYD1_k127_11804108_8 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 380.0
BYD1_k127_11804108_9 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009906 347.0
BYD1_k127_11812054_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1421.0
BYD1_k127_11812054_1 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 1.948e-289 904.0
BYD1_k127_11812054_2 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002946 566.0
BYD1_k127_11812054_3 PFAM pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00169,K03737 - 1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002709 491.0
BYD1_k127_11812054_4 oxidoreductase, gamma subunit K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000000000000000000004231 263.0
BYD1_k127_11812054_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.0000000000000000000000000000000000000000000000000000009203 204.0
BYD1_k127_11837459_0 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 527.0
BYD1_k127_11837459_1 transcriptional - - - 0.000000000000000000000000000000000000000000000000003724 183.0
BYD1_k127_11837459_2 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.0000000000000000000000000000000000000000000000001282 178.0
BYD1_k127_11837459_3 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0000000000000001391 80.0
BYD1_k127_11843459_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 1.094e-277 871.0
BYD1_k127_11843459_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 526.0
BYD1_k127_11843459_2 ABC transporter transmembrane region K06148,K12536 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002015 462.0
BYD1_k127_11846877_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 9.676e-264 817.0
BYD1_k127_11846877_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 4.775e-229 747.0
BYD1_k127_11846877_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004365 274.0
BYD1_k127_11846877_11 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001546 267.0
BYD1_k127_11846877_12 cellulose binding - - - 0.000000000000000000000000000000000000000000000000000000000000000004398 234.0
BYD1_k127_11846877_13 Transcriptional regulator K07722 - - 0.00000000000000000000000000000000000000000000000000000000000000001377 227.0
BYD1_k127_11846877_14 Thioesterase superfamily - - - 0.0000000000000000000000000000000000000000000000000000008027 199.0
BYD1_k127_11846877_15 Alkylphosphonate utilization operon protein PhnA K06193 - - 0.000000000000000000000000000000000000000000000000000009814 199.0
BYD1_k127_11846877_16 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 - - 0.000000000000000000000000000000000000000002921 163.0
BYD1_k127_11846877_17 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000006623 160.0
BYD1_k127_11846877_18 Chemoreceptor zinc-binding domain - - - 0.0000000000000000002832 94.0
BYD1_k127_11846877_19 Nickel-dependent hydrogenase - - - 0.000000000000000001732 98.0
BYD1_k127_11846877_2 Diguanylate cyclase - - - 2.608e-202 656.0
BYD1_k127_11846877_20 - - - - 0.00000000000000000408 88.0
BYD1_k127_11846877_21 Protein of unknown function (DUF465) - - - 0.00000000000000001715 84.0
BYD1_k127_11846877_22 .,Oxidizes proline to glutamate for use as a carbon and nitrogen source - - - 0.0000000004458 63.0
BYD1_k127_11846877_23 Protein of unknown function (DUF3617) - - - 0.00000001517 65.0
BYD1_k127_11846877_3 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 426.0
BYD1_k127_11846877_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004049 389.0
BYD1_k127_11846877_5 Helix-turn-helix type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008419 372.0
BYD1_k127_11846877_6 COG1575 1,4-dihydroxy-2-naphthoate octaprenyltransferase K02548 - 2.5.1.74 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 359.0
BYD1_k127_11846877_7 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008077 362.0
BYD1_k127_11846877_8 SMART helix-turn-helix domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003052 345.0
BYD1_k127_11846877_9 High-affinity nickel-transport protein K07241 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000208 340.0
BYD1_k127_11881392_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.863e-260 813.0
BYD1_k127_11881392_1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001421 594.0
BYD1_k127_11881392_2 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006633 527.0
BYD1_k127_11881392_3 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005488 511.0
BYD1_k127_11929478_0 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.497e-321 992.0
BYD1_k127_11929478_1 Belongs to the binding-protein-dependent transport system permease family K01995,K01998 - - 1.052e-279 878.0
BYD1_k127_11929478_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000611 469.0
BYD1_k127_11929478_3 involved in chromosome partitioning K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004011 425.0
BYD1_k127_11929478_4 Belongs to the ParB family K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005309 394.0
BYD1_k127_11929478_5 ATP-binding cassette (ABC) transporters are multidomain membrane proteins, responsible for the controlled efflux and influx of substances (allocrites) across cellular membranes. ATP-binding protein is for coupling the energy of ATP hydrolysis to conformational changes in the transmembrane domains K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006434 346.0
BYD1_k127_11929478_6 amino acid K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006729 331.0
BYD1_k127_11929478_7 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000007218 231.0
BYD1_k127_11929478_8 PFAM CBS domain containing protein - - - 0.0000000000000000000000000000000000000000000000000000213 194.0
BYD1_k127_11929478_9 ATP synthase I chain K02116 - - 0.0000000005062 66.0
BYD1_k127_11984224_0 Proton-conducting membrane transporter - - - 0.0 1285.0
BYD1_k127_11984224_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 520.0
BYD1_k127_11984224_2 4Fe-4S binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000651 309.0
BYD1_k127_11984224_3 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 297.0
BYD1_k127_11984224_4 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001828 261.0
BYD1_k127_11984224_5 Nickel-dependent hydrogenase K00333,K14090,K15830 - 1.6.5.3 0.0000002718 59.0
BYD1_k127_11999630_0 Isocitrate dehydrogenase K00031 - 1.1.1.42 0.0 1344.0
BYD1_k127_11999630_1 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 0.0 1307.0
BYD1_k127_11999630_10 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 286.0
BYD1_k127_11999630_11 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000007449 164.0
BYD1_k127_11999630_12 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000002065 155.0
BYD1_k127_11999630_13 Protein of unknown function, DUF485 - - - 0.0000000000000000000000000000000000000777 143.0
BYD1_k127_11999630_14 Cold shock K03704 - - 0.00000000000000000000000000000000006673 136.0
BYD1_k127_11999630_15 Glycine-zipper domain - - - 0.00000000000000000000000000000001371 134.0
BYD1_k127_11999630_16 - - - - 0.0000000000000000000000004908 107.0
BYD1_k127_11999630_17 - - - - 0.000000000000000000000009214 105.0
BYD1_k127_11999630_19 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.0000000866 62.0
BYD1_k127_11999630_2 C-terminal, D2-small domain, of ClpB protein K03694 - - 0.0 1219.0
BYD1_k127_11999630_3 UPF0313 protein - - - 0.0 1092.0
BYD1_k127_11999630_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 6.106e-295 913.0
BYD1_k127_11999630_5 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008245 589.0
BYD1_k127_11999630_6 PFAM NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 581.0
BYD1_k127_11999630_7 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 544.0
BYD1_k127_11999630_8 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 296.0
BYD1_k127_11999630_9 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 291.0
BYD1_k127_12024299_0 methionine synthase K00548 - 2.1.1.13 2.599e-258 801.0
BYD1_k127_12024299_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002021 533.0
BYD1_k127_12024299_2 drug resistance transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 391.0
BYD1_k127_12024299_3 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000002886 216.0
BYD1_k127_12024299_4 - - - - 0.000000000000000000000000000000000000000000003279 168.0
BYD1_k127_12024299_5 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000001709 165.0
BYD1_k127_12024299_6 - - - - 0.000000000000000000000000000000000000001187 153.0
BYD1_k127_12024299_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000002173 118.0
BYD1_k127_1212108_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 1.016e-313 983.0
BYD1_k127_1212108_1 Catalyzes the formation of 2-oxoglutarate from isocitrate K00030 - 1.1.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005711 534.0
BYD1_k127_1212108_2 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007102 349.0
BYD1_k127_1212108_3 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001592 282.0
BYD1_k127_1212108_4 DNA polymerase III K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000001133 269.0
BYD1_k127_1212108_5 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.0000000000000000000000000000000000000000000000000000000004117 205.0
BYD1_k127_1212108_6 pilus assembly protein PilZ K02676 - - 0.00000000000000000000000000000000000000000000003937 173.0
BYD1_k127_1212108_7 ankyrin repeat K06867 - - 0.00000000000000000000000000000000002231 144.0
BYD1_k127_12169940_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K12276 - - 2.576e-272 846.0
BYD1_k127_12169940_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 3.608e-206 660.0
BYD1_k127_12169940_10 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000000000004524 209.0
BYD1_k127_12169940_11 transcriptional - - - 0.000000000000000000000000000000000000000000000001409 177.0
BYD1_k127_12169940_12 - - - - 0.000000000000000000000000000000000000000001498 162.0
BYD1_k127_12169940_13 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000005864 154.0
BYD1_k127_12169940_14 - - - - 0.00000000000000000000000000000000000001352 151.0
BYD1_k127_12169940_15 Protein of unknown function (DUF2721) - - - 0.00000000000000000000000000000000000001649 151.0
BYD1_k127_12169940_16 Bacterial SH3 domain - - - 0.00000000000000000000000000000000004808 145.0
BYD1_k127_12169940_17 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000001268 126.0
BYD1_k127_12169940_18 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000000005944 138.0
BYD1_k127_12169940_2 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003302 448.0
BYD1_k127_12169940_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 423.0
BYD1_k127_12169940_4 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 K21029 - 2.7.7.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 398.0
BYD1_k127_12169940_5 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008357 399.0
BYD1_k127_12169940_6 Flavodoxin domain K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 314.0
BYD1_k127_12169940_7 peptidase, M23 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 323.0
BYD1_k127_12169940_8 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001596 241.0
BYD1_k127_12169940_9 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000007301 230.0
BYD1_k127_1228156_0 Nickel-dependent hydrogenase K06281 - 1.12.99.6 8.468e-300 922.0
BYD1_k127_1228156_1 Prokaryotic cytochrome b561 K03620 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 291.0
BYD1_k127_1241664_0 Respiratory-chain NADH dehydrogenase K18005 - 1.12.1.2 8.65e-233 730.0
BYD1_k127_1241664_1 NiFe/NiFeSe hydrogenase small subunit C-terminal K06282 - 1.12.99.6 1.978e-200 631.0
BYD1_k127_1241664_2 formate dehydrogenase K00124 - - 0.000000000000000000000000000000000000000000000000000000000001505 211.0
BYD1_k127_1247112_0 COG0028 Thiamine pyrophosphate-requiring enzymes acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase K01652 - 2.2.1.6 7.312e-318 979.0
BYD1_k127_1247112_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 2.811e-200 627.0
BYD1_k127_1247112_2 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 557.0
BYD1_k127_1247112_3 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 555.0
BYD1_k127_1247112_4 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005086 336.0
BYD1_k127_1247112_5 Acetolactate synthase small K01653 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003397 284.0
BYD1_k127_1247112_6 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000000000000000001214 181.0
BYD1_k127_1247112_7 Ribosomal L27 protein K02899 - - 0.000000000000000000000000000000000000005249 146.0
BYD1_k127_1386341_0 GTP-binding GTPase Middle Region - - - 3.507e-211 672.0
BYD1_k127_1386341_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001033 544.0
BYD1_k127_1386341_10 cell shape determination - - - 0.0000000000004107 81.0
BYD1_k127_1386341_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007371 454.0
BYD1_k127_1386341_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001835 385.0
BYD1_k127_1386341_4 Serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000009119 241.0
BYD1_k127_1386341_5 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000000001556 191.0
BYD1_k127_1386341_6 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000003085 194.0
BYD1_k127_1386341_7 chain release factor K15034 - - 0.0000000000000000000000000000000000000000000000001777 188.0
BYD1_k127_1386341_9 Transporter associated domain K03699 - - 0.000000000000000000000000000001886 123.0
BYD1_k127_1477159_0 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 1.521e-236 735.0
BYD1_k127_1477159_1 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 377.0
BYD1_k127_1477159_2 pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for K15987 - 3.6.1.1 0.0000007889 50.0
BYD1_k127_1489112_0 Major Facilitator Superfamily - - - 1.178e-306 945.0
BYD1_k127_1489112_1 Activator of aromatic catabolism - - - 3.029e-217 696.0
BYD1_k127_1489112_10 Protein of unknown function (DUF692) K09930 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 418.0
BYD1_k127_1489112_11 transcriptional regulator K11921 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 382.0
BYD1_k127_1489112_12 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001792 377.0
BYD1_k127_1489112_13 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001389 367.0
BYD1_k127_1489112_14 Pterin binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006372 357.0
BYD1_k127_1489112_15 PFAM amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 363.0
BYD1_k127_1489112_16 COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 K21832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 334.0
BYD1_k127_1489112_17 Methionine synthase B12-binding module cap domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 301.0
BYD1_k127_1489112_18 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-17-dioic acid hydratase (catechol pathway) K16165 - 3.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001592 299.0
BYD1_k127_1489112_19 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003443 263.0
BYD1_k127_1489112_2 PFAM Aldehyde dehydrogenase K00141 - 1.2.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007156 610.0
BYD1_k127_1489112_20 TonB C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003209 273.0
BYD1_k127_1489112_21 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000001072 250.0
BYD1_k127_1489112_22 DoxX family K15977 - - 0.00000000000000000000000000000000000000000000000000000000000000001298 236.0
BYD1_k127_1489112_23 Putative DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000264 196.0
BYD1_k127_1489112_24 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000001871 199.0
BYD1_k127_1489112_25 FHA domain - - - 0.0000000000000000000000000000000000000000000000007682 183.0
BYD1_k127_1489112_26 Isochorismatase family - - - 0.00000000000000000000000000000000000000000001655 169.0
BYD1_k127_1489112_27 - - - - 0.0000000000000000000000000000000000000000001488 166.0
BYD1_k127_1489112_28 Regulatory protein MarR - - - 0.000000000000000000000000000000000000001233 154.0
BYD1_k127_1489112_29 Predicted integral membrane protein (DUF2282) - - - 0.000000000000000000000000000000000000006112 149.0
BYD1_k127_1489112_3 Domain of unknown function (DUF4445) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004562 599.0
BYD1_k127_1489112_30 methionine synthase K00548 - 2.1.1.13 0.000000000000000000000000211 123.0
BYD1_k127_1489112_31 Formate dehydrogenase gamma subunit K00127 - - 0.0000000000000000000000477 111.0
BYD1_k127_1489112_32 - - - - 0.00000000000003331 80.0
BYD1_k127_1489112_33 Protein of unknown function (DUF1302) - - - 0.00000000009285 64.0
BYD1_k127_1489112_34 Transmembrane anti-sigma factor - - - 0.0000001566 62.0
BYD1_k127_1489112_35 TIGRFAM TonB K03832 - - 0.000006359 57.0
BYD1_k127_1489112_4 PFAM Uroporphyrinogen decarboxylase (URO-D) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 574.0
BYD1_k127_1489112_5 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002469 569.0
BYD1_k127_1489112_6 Alcohol dehydrogenase GroES-like domain K00055 - 1.1.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004436 541.0
BYD1_k127_1489112_7 Methylenetetrahydrofolate reductase K00297,K00547 - 1.5.1.20,2.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 495.0
BYD1_k127_1489112_8 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 460.0
BYD1_k127_1489112_9 Hsp70 protein K04046 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007426 447.0
BYD1_k127_1549892_0 General secretion pathway K02456 - - 0.0000000000000000000000000000000000000000000000000000000002399 206.0
BYD1_k127_1549892_1 type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000001938 164.0
BYD1_k127_1549892_2 prepilin-type N-terminal cleavage methylation K02456 - - 0.000000000000000000000000000000000000001507 151.0
BYD1_k127_1549892_3 Type II secretory pathway pseudopilin - - - 0.000000000002743 72.0
BYD1_k127_1560180_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1491.0
BYD1_k127_1560180_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 7.498e-250 781.0
BYD1_k127_1560180_10 Protein of unknown function (DUF3106) - - - 0.0000000000000000000000000000008207 126.0
BYD1_k127_1560180_11 membrane protein domain - - - 0.000000000000000000000000921 111.0
BYD1_k127_1560180_12 Protein of unknown function (DUF3619) - - - 0.000000000001367 74.0
BYD1_k127_1560180_2 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 435.0
BYD1_k127_1560180_3 Predicted permease YjgP/YjgQ family K11720 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 440.0
BYD1_k127_1560180_4 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 423.0
BYD1_k127_1560180_5 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005588 413.0
BYD1_k127_1560180_6 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008602 285.0
BYD1_k127_1560180_7 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001084 270.0
BYD1_k127_1560180_8 DsrE/DsrF/DrsH-like family - - - 0.000000000000000000000000000000000000000000000000000000001814 201.0
BYD1_k127_1560180_9 DNA polymerase III, chi subunit K02339 - 2.7.7.7 0.0000000000000000000000000000000000004785 156.0
BYD1_k127_1561629_0 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 2.111e-208 649.0
BYD1_k127_1561629_1 Aminotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 509.0
BYD1_k127_1561629_2 - K11275 - - 0.0000001036 53.0
BYD1_k127_1693023_0 RNB K01147 - 3.1.13.1 1.276e-262 827.0
BYD1_k127_1693023_1 Magnesium transport protein CorA K03284 - - 5.747e-211 664.0
BYD1_k127_1693023_10 Phosphatidylethanolamine-binding protein K06910 - - 0.0000000000000000000000000000000000000000000000000000000000000377 226.0
BYD1_k127_1693023_11 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.0000000000000000000000000000000000000000000000000000006347 203.0
BYD1_k127_1693023_12 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000009483 189.0
BYD1_k127_1693023_13 Fe-S-cluster oxidoreductase K06940 - - 0.00000000000000000000000000003027 124.0
BYD1_k127_1693023_14 Domain of unknown function (DUF4124) - - - 0.00000000003614 70.0
BYD1_k127_1693023_2 Aminotransferase K01845 - 5.4.3.8 3.569e-200 638.0
BYD1_k127_1693023_3 Domain of unknown function (DUF3391) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 586.0
BYD1_k127_1693023_4 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 447.0
BYD1_k127_1693023_5 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 415.0
BYD1_k127_1693023_6 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004737 332.0
BYD1_k127_1693023_7 TonB family K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 326.0
BYD1_k127_1693023_8 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005436 307.0
BYD1_k127_1693023_9 cheY-homologous receiver domain K02657 - - 0.000000000000000000000000000000000000000000000000000000000000008163 218.0
BYD1_k127_1723767_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 7.236e-202 639.0
BYD1_k127_1723767_1 Ammonium transporter K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009096 440.0
BYD1_k127_1723767_2 PFAM conserved - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 366.0
BYD1_k127_1723767_3 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005961 264.0
BYD1_k127_1723767_4 Belongs to the P(II) protein family K04752 - - 0.000000000000000000000000000000000000000000000000000000000005862 208.0
BYD1_k127_1723767_5 protein conserved in bacteria K09806 - - 0.00000000000000000003022 92.0
BYD1_k127_1741849_0 Amidohydrolase K10220 - 4.2.1.83 1.716e-202 644.0
BYD1_k127_1741849_1 protein conserved in bacteria K16514 GO:0003674,GO:0003824,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0042537,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 5.3.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003704 544.0
BYD1_k127_1741849_2 PFAM Amidohydrolase 2 K10221 - 3.1.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003332 522.0
BYD1_k127_1741849_3 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 432.0
BYD1_k127_1741849_4 Aldolase/RraA K10218 - 4.1.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001992 360.0
BYD1_k127_1741849_5 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000003493 187.0
BYD1_k127_1741849_6 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000008428 171.0
BYD1_k127_1741849_7 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) K04762 - - 0.000000000000000000000000000000000000000000966 159.0
BYD1_k127_1741849_8 Flavodoxin domain K00230 - 1.3.5.3 0.0000000000000000000002098 97.0
BYD1_k127_1741849_9 - - - - 0.00000007931 62.0
BYD1_k127_1753789_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1272.0
BYD1_k127_1753789_1 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 3.914e-305 947.0
BYD1_k127_1753789_10 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 471.0
BYD1_k127_1753789_11 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 422.0
BYD1_k127_1753789_12 dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004324 404.0
BYD1_k127_1753789_13 Branched-chain amino acid aminotransferase 4-amino-4-deoxychorismate lyase K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004256 404.0
BYD1_k127_1753789_14 Belongs to the LOG family K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005907 368.0
BYD1_k127_1753789_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 354.0
BYD1_k127_1753789_16 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003286 342.0
BYD1_k127_1753789_17 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 328.0
BYD1_k127_1753789_18 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004431 335.0
BYD1_k127_1753789_19 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002231 314.0
BYD1_k127_1753789_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 2.227e-238 745.0
BYD1_k127_1753789_20 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 316.0
BYD1_k127_1753789_21 Protein of unknown function (DUF4197) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005156 282.0
BYD1_k127_1753789_22 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001211 280.0
BYD1_k127_1753789_23 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000067 255.0
BYD1_k127_1753789_24 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.0000000000000000000000000000000000000000000000000000000000000000000004303 244.0
BYD1_k127_1753789_25 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000000000000000000000000000000000000002223 229.0
BYD1_k127_1753789_26 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000003298 231.0
BYD1_k127_1753789_27 shape-determining protein K03571 - - 0.000000000000000000000000000000000000000000000000000000000004283 222.0
BYD1_k127_1753789_28 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000001736 210.0
BYD1_k127_1753789_29 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000112 211.0
BYD1_k127_1753789_3 Belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 4.045e-230 721.0
BYD1_k127_1753789_30 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000001465 192.0
BYD1_k127_1753789_31 NLP P60 protein - - - 0.000000000000000000000000000000000000000000000000008189 184.0
BYD1_k127_1753789_32 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000000000000000269 179.0
BYD1_k127_1753789_33 - - - - 0.0000000000000000000000000000000000000002589 159.0
BYD1_k127_1753789_34 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.0000000000000000000000000000000000003241 146.0
BYD1_k127_1753789_35 Belongs to the UPF0250 family K09158 - - 0.0000000000000000000000000000000000004983 140.0
BYD1_k127_1753789_36 Bacterial transferase hexapeptide (six repeats) K00661 - 2.3.1.79 0.0000000000000000000000000000000000314 155.0
BYD1_k127_1753789_37 Protein of unknown function (DUF2782) - - - 0.0000000000000000000000000000000001654 137.0
BYD1_k127_1753789_38 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000000000000001036 134.0
BYD1_k127_1753789_39 Bacterial protein of unknown function (DUF883) - - - 0.000000000000000000000000000000007297 130.0
BYD1_k127_1753789_4 ribonuclease, Rne Rng family K08301 - - 1.874e-225 709.0
BYD1_k127_1753789_40 - - - - 0.000000000000000000000000001106 121.0
BYD1_k127_1753789_41 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.0000000000000000000001575 101.0
BYD1_k127_1753789_42 - - - - 0.0000000000000000000004618 110.0
BYD1_k127_1753789_43 Met-10+ like-protein - - - 0.0000000000000000801 83.0
BYD1_k127_1753789_44 YqjK-like protein - - - 0.000000000001403 76.0
BYD1_k127_1753789_45 Restriction endonuclease - - - 0.0000000001145 72.0
BYD1_k127_1753789_5 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 2.292e-222 697.0
BYD1_k127_1753789_6 Rod shape-determining protein MreB K03569 - - 3.2e-205 650.0
BYD1_k127_1753789_7 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 503.0
BYD1_k127_1753789_8 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 500.0
BYD1_k127_1753789_9 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009244 493.0
BYD1_k127_1807465_0 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 7.923e-220 700.0
BYD1_k127_1807465_1 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 531.0
BYD1_k127_1807465_2 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000346 339.0
BYD1_k127_1840165_0 ABC transporter transmembrane region K12541 - - 0.0 1029.0
BYD1_k127_1840165_1 HlyD family secretion protein K12542 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 586.0
BYD1_k127_1840165_2 luxR family - - - 0.0000000000000000000000000000000000000000000002571 174.0
BYD1_k127_1840165_3 COG2931, RTX toxins and related Ca2 -binding proteins - - - 0.00000000000000000000000000001035 128.0
BYD1_k127_1840165_4 NapC/NirT cytochrome c family, N-terminal region K02569 - - 0.000000000000000000003403 96.0
BYD1_k127_1851396_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 1.451e-298 919.0
BYD1_k127_1851396_1 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 5.277e-284 888.0
BYD1_k127_1851396_10 D-Ala-D-Ala carboxypeptidase 3 (S13) family K07259 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 469.0
BYD1_k127_1851396_11 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002833 408.0
BYD1_k127_1851396_12 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001607 338.0
BYD1_k127_1851396_13 Amidohydrolase K01686 - 4.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 342.0
BYD1_k127_1851396_14 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001291 279.0
BYD1_k127_1851396_15 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005939 289.0
BYD1_k127_1851396_16 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002387 282.0
BYD1_k127_1851396_17 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000122 220.0
BYD1_k127_1851396_18 membrane - - - 0.00000000000000000000000000000000000000000000000000005296 190.0
BYD1_k127_1851396_19 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000002121 195.0
BYD1_k127_1851396_2 Belongs to the mannose-6-phosphate isomerase type 2 family K16011 - 2.7.7.13,5.3.1.8 1.942e-233 733.0
BYD1_k127_1851396_20 TIGRFAM transcriptional regulator EpsA - - - 0.0000000000000000000000000000000000000000000003439 179.0
BYD1_k127_1851396_21 diguanylate cyclase - - - 0.000000000000000000000000000000000000000002989 174.0
BYD1_k127_1851396_22 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000001062 160.0
BYD1_k127_1851396_23 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000003612 88.0
BYD1_k127_1851396_24 Sporulation related domain - - - 0.0000000001263 71.0
BYD1_k127_1851396_25 Protein of unknown function (DUF2802) - - - 0.0000001271 61.0
BYD1_k127_1851396_26 - - - - 0.0003718 44.0
BYD1_k127_1851396_3 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 1.512e-194 616.0
BYD1_k127_1851396_4 Belongs to the UDP-N-acetylglucosamine 2-epimerase family K01791 - 5.1.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000245 583.0
BYD1_k127_1851396_5 Vacuole effluxer Atg22 like K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 589.0
BYD1_k127_1851396_6 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 554.0
BYD1_k127_1851396_7 Phosphate transporter K03306 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008307 535.0
BYD1_k127_1851396_8 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003716 488.0
BYD1_k127_1851396_9 NAD(P)H-binding K01784,K12448 - 5.1.3.2,5.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 488.0
BYD1_k127_1887043_0 Malic enzyme, NAD binding domain K00027,K00029 GO:0003674,GO:0003824,GO:0004470,GO:0004473,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0030145,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0055114 1.1.1.38,1.1.1.40 0.0 1037.0
BYD1_k127_1887043_1 Domain of unknown function (DUF3390) K18929 - - 2.19e-211 678.0
BYD1_k127_1887043_2 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 548.0
BYD1_k127_1887043_3 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 416.0
BYD1_k127_1887043_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009256 368.0
BYD1_k127_1887043_5 Cysteine-rich domain K18928 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 339.0
BYD1_k127_1887043_6 Belongs to the peptidase S11 family K07262 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000506 311.0
BYD1_k127_1887043_7 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00018,K00058 - 1.1.1.29,1.1.1.399,1.1.1.95 0.0000000000000000000000001125 116.0
BYD1_k127_1894924_0 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 429.0
BYD1_k127_1894924_1 Serine Threonine protein K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 417.0
BYD1_k127_1894924_10 HEPN domain - - - 0.0000002685 59.0
BYD1_k127_1894924_2 Helix-turn-helix XRE-family like proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002374 275.0
BYD1_k127_1894924_3 PFAM Metallophosphoesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004373 270.0
BYD1_k127_1894924_4 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000004407 247.0
BYD1_k127_1894924_5 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family - - - 0.00000000000000000000000000000000000000000000000000000000000000009553 228.0
BYD1_k127_1894924_6 Nucleotidyltransferase domain - - - 0.000000000000000000000000000000836 130.0
BYD1_k127_1894924_8 Universal stress protein family K07090 - - 0.00000000000000000000009496 108.0
BYD1_k127_1981864_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 1.067e-314 970.0
BYD1_k127_1981864_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K21834 - - 1.63e-233 730.0
BYD1_k127_1981864_10 COG0644 Dehydrogenases (flavoproteins) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002513 333.0
BYD1_k127_1981864_11 Pfam Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005811 299.0
BYD1_k127_1981864_12 Putative redox-active protein (C_GCAxxG_C_C) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001337 241.0
BYD1_k127_1981864_13 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000006698 239.0
BYD1_k127_1981864_14 Proteobacterial lipase chaperone protein - - - 0.0000000000000000000000000000000000000000000002321 179.0
BYD1_k127_1981864_15 S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000000365 171.0
BYD1_k127_1981864_16 nitrogen fixation K02593 - - 0.0000000000000000000000000000000009889 130.0
BYD1_k127_1981864_17 Type IV pili methyl-accepting chemotaxis transducer N-term - - - 0.000000000000000000000000000000002634 142.0
BYD1_k127_1981864_18 4Fe-4S binding domain - - - 0.0000000000000000000000000000005975 122.0
BYD1_k127_1981864_19 - - - - 0.000000000000000000000001987 119.0
BYD1_k127_1981864_2 COG1138 Cytochrome c biogenesis factor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000795 585.0
BYD1_k127_1981864_20 - - - - 0.0000000000008086 75.0
BYD1_k127_1981864_3 This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation K02591 - 1.18.6.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 552.0
BYD1_k127_1981864_4 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003791 550.0
BYD1_k127_1981864_5 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 434.0
BYD1_k127_1981864_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009548 407.0
BYD1_k127_1981864_7 Alpha beta hydrolase fold K01046 - 3.1.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006765 347.0
BYD1_k127_1981864_8 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001927 347.0
BYD1_k127_1981864_9 nitrate reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 327.0
BYD1_k127_2023145_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 3.828e-221 700.0
BYD1_k127_2023145_1 PFAM NnrS family protein K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 516.0
BYD1_k127_2023145_10 SCO1/SenC K07152 - - 0.000000000000000000000000000000000000000000000000000000000001558 214.0
BYD1_k127_2023145_11 Biopolymer transport protein K03559 - - 0.0000000000000000000000000000000000000000000000001201 191.0
BYD1_k127_2023145_12 - - - - 0.000000000000000000000000000000000000000000000003326 181.0
BYD1_k127_2023145_13 - - - - 0.000000000000000000000000000000000000000001047 162.0
BYD1_k127_2023145_14 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000000000000000000000000006693 173.0
BYD1_k127_2023145_15 Belongs to the UPF0434 family K09791 - - 0.000000000000000000000006286 102.0
BYD1_k127_2023145_16 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.00000000000000000000009725 106.0
BYD1_k127_2023145_17 DnaJ molecular chaperone homology domain - - - 0.000000000000123 83.0
BYD1_k127_2023145_18 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.00004098 46.0
BYD1_k127_2023145_2 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007368 415.0
BYD1_k127_2023145_3 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001279 377.0
BYD1_k127_2023145_4 His Kinase A (phosphoacceptor) domain K15011 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 372.0
BYD1_k127_2023145_5 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 343.0
BYD1_k127_2023145_6 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 326.0
BYD1_k127_2023145_7 MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 286.0
BYD1_k127_2023145_8 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000000000000000000001819 243.0
BYD1_k127_2023145_9 COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain K15012 - - 0.0000000000000000000000000000000000000000000000000000000000000007264 223.0
BYD1_k127_202535_0 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 6.846e-196 631.0
BYD1_k127_202535_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007126 544.0
BYD1_k127_202535_10 BrnA antitoxin of type II toxin-antitoxin system - - - 0.000000000000000000000000000002291 121.0
BYD1_k127_202535_11 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.0000000000000000000000000002939 115.0
BYD1_k127_202535_12 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000002331 89.0
BYD1_k127_202535_2 Hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009421 370.0
BYD1_k127_202535_3 Pfam:UPF0118 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004251 369.0
BYD1_k127_202535_4 Prolyl oligopeptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002194 261.0
BYD1_k127_202535_5 protein conserved in bacteria K09922 - - 0.0000000000000000000000000000000000000000000000000000000008228 206.0
BYD1_k127_202535_6 Belongs to the DnaA family K10763 - - 0.000000000000000000000000000000000000000000000000000000005459 220.0
BYD1_k127_202535_7 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.000000000000000000000000000000000000000000000001382 179.0
BYD1_k127_202535_8 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000039 160.0
BYD1_k127_202535_9 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.000000000000000000000000000000000008527 138.0
BYD1_k127_2156692_0 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001434 480.0
BYD1_k127_2156692_1 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 472.0
BYD1_k127_2156692_2 Domain of unknown function (DUF309) - - - 0.0000000000000000000000000000000000000000000000000000000001894 204.0
BYD1_k127_2156692_3 Histidine biosynthesis protein - - - 0.0000000000000000000000000000000000000000000000000000001737 201.0
BYD1_k127_2156692_4 - - - - 0.00000000000000000000000000000000000000000000000508 181.0
BYD1_k127_2156692_5 - - - - 0.0000000000000000000000000000000000000000008119 162.0
BYD1_k127_2175186_0 Belongs to the MurCDEF family K01924 - 6.3.2.8 7.724e-240 748.0
BYD1_k127_2175186_1 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007139 593.0
BYD1_k127_2175186_2 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 525.0
BYD1_k127_2175186_3 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 520.0
BYD1_k127_2175186_4 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000002505 102.0
BYD1_k127_2215740_0 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006163 364.0
BYD1_k127_2215740_1 Participates in transcription elongation, termination and antitermination K02601 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007815 324.0
BYD1_k127_2215740_2 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008591 281.0
BYD1_k127_2215740_3 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001911 262.0
BYD1_k127_2215740_4 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000000000000000000000005986 189.0
BYD1_k127_2215740_5 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.000000000000000000000000000000000000000000000001635 175.0
BYD1_k127_2215740_6 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000001267 85.0
BYD1_k127_2287466_0 methionine synthase K00548 - 2.1.1.13 0.0 1013.0
BYD1_k127_2287466_1 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate K00974 - 2.7.7.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002909 562.0
BYD1_k127_2287466_2 Domain of unknown function (DUF4143) K07133 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006208 469.0
BYD1_k127_2287466_3 Alpha beta hydrolase K00433 - 1.11.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 375.0
BYD1_k127_2287466_4 enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 328.0
BYD1_k127_2287466_5 Haloacid dehalogenase-like hydrolase K20881 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
BYD1_k127_2287466_6 DsrE/DsrF-like family - - - 0.00000000000000000000000000002008 124.0
BYD1_k127_2287466_7 pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000004402 116.0
BYD1_k127_2287466_8 Domain of unknown function (DUF1840) - - - 0.000000000000000000079 97.0
BYD1_k127_2295643_0 CHASE2 K01768 - 4.6.1.1 4.779e-255 806.0
BYD1_k127_2295643_1 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 459.0
BYD1_k127_2295643_2 AAA domain K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 352.0
BYD1_k127_2295643_3 AAA ATPase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009176 332.0
BYD1_k127_2295643_4 Secretin N-terminal domain K02453,K12282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007171 307.0
BYD1_k127_2295643_5 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.00000000000000000000000000000000000000000000000000000000000000000000002893 259.0
BYD1_k127_2295643_6 Nuclease (SNase domain protein) - - - 0.00000000000000000000000000000000000000001315 162.0
BYD1_k127_2295643_7 FecR protein - - - 0.0000000000000000000000000000004589 139.0
BYD1_k127_2295643_8 Tetratricopeptide repeat K12284 - - 0.0000000000000000000000000002173 130.0
BYD1_k127_2295643_9 Protein of unknown function (DUF560) - - - 0.00000000000000000000000005898 119.0
BYD1_k127_2372784_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 0.0 1057.0
BYD1_k127_2372784_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 585.0
BYD1_k127_2448121_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K00436 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001946 557.0
BYD1_k127_2448121_1 4Fe-4S single cluster domain K18006 - 1.12.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 379.0
BYD1_k127_2448121_2 NADH ubiquinone oxidoreductase, 20 K18007 - 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 326.0
BYD1_k127_2448121_3 Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K18005 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 1.12.1.2 0.00000000000000000000000000000000000000000000000000000000000000218 219.0
BYD1_k127_248561_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K01908 - 6.2.1.17 0.0 1113.0
BYD1_k127_248561_1 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 587.0
BYD1_k127_248561_10 Histidine kinase - - - 0.00000000000000000000000000000000000000000000003024 181.0
BYD1_k127_248561_11 PFAM Lytic transglycosylase catalytic K08309 - - 0.00000000000000000000000000000000000000000002261 170.0
BYD1_k127_248561_12 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.0000000000000000002076 102.0
BYD1_k127_248561_2 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008963 506.0
BYD1_k127_248561_3 PFAM type II secretion system K02455,K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 365.0
BYD1_k127_248561_4 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003331 304.0
BYD1_k127_248561_5 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001676 289.0
BYD1_k127_248561_6 FKBP-type peptidyl-prolyl cis-trans K03772,K03773 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000001932 223.0
BYD1_k127_248561_7 PFAM electron transport protein SCO1 SenC K07152 - - 0.00000000000000000000000000000000000000000000000000000000001712 213.0
BYD1_k127_248561_8 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000000000000001873 202.0
BYD1_k127_248561_9 NLP P60 protein - - - 0.0000000000000000000000000000000000000000000000000003322 189.0
BYD1_k127_2512697_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 2.036e-320 992.0
BYD1_k127_2512697_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 450.0
BYD1_k127_2512697_10 Belongs to the UPF0312 family - - - 0.0000000000000000000000000000000000000000000000000000000000001517 224.0
BYD1_k127_2512697_11 - - - - 0.0000000000000000005066 91.0
BYD1_k127_2512697_12 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.00000000000000002461 81.0
BYD1_k127_2512697_13 Protein of unknown function DUF45 K07043 - - 0.0000000001487 70.0
BYD1_k127_2512697_2 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 388.0
BYD1_k127_2512697_3 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 331.0
BYD1_k127_2512697_4 diguanylate cyclase K13590 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000816 316.0
BYD1_k127_2512697_5 Acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 299.0
BYD1_k127_2512697_6 Cytochrome B561 K12262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005114 280.0
BYD1_k127_2512697_7 D,D-heptose 1,7-bisphosphate phosphatase K03273 - 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003082 271.0
BYD1_k127_2512697_8 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005046 254.0
BYD1_k127_2512697_9 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000003545 241.0
BYD1_k127_2515217_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 3.418e-292 906.0
BYD1_k127_2515217_1 DegT/DnrJ/EryC1/StrS aminotransferase family K20429 - 2.6.1.33 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007917 595.0
BYD1_k127_2515217_10 ATP-grasp - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003216 309.0
BYD1_k127_2515217_11 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001791 286.0
BYD1_k127_2515217_12 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002929 291.0
BYD1_k127_2515217_13 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000005604 259.0
BYD1_k127_2515217_14 Cytochrome c K17223 - - 0.0000000000000000000000000000000000000000000000000000000000000001336 228.0
BYD1_k127_2515217_15 - - - - 0.000000000000000000000000000000000000000000000000000000000005106 218.0
BYD1_k127_2515217_16 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000000000000000000000000000002511 184.0
BYD1_k127_2515217_17 PFAM Glycosyl transferase family 2 K12990 - - 0.00000000000000000000000000000000000000000000003468 185.0
BYD1_k127_2515217_18 Belongs to the N-Me-Phe pilin family K02650 - - 0.000000000000000000000000000000000000003601 151.0
BYD1_k127_2515217_19 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.00000000000000000000000000001228 119.0
BYD1_k127_2515217_2 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 494.0
BYD1_k127_2515217_3 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 485.0
BYD1_k127_2515217_4 Glycosyltransferase like family 2 K07011 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003569 457.0
BYD1_k127_2515217_5 PFAM Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 381.0
BYD1_k127_2515217_6 CHAD domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005486 383.0
BYD1_k127_2515217_7 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 366.0
BYD1_k127_2515217_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002066 348.0
BYD1_k127_2515217_9 abc transporter K02003,K05685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 336.0
BYD1_k127_2571970_0 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 4.885e-215 673.0
BYD1_k127_2571970_1 MgsA AAA+ ATPase C terminal K07478 - - 2.402e-207 652.0
BYD1_k127_2571970_10 HAF family - - - 0.0000000000006473 69.0
BYD1_k127_2571970_11 Caspase domain - - - 0.0009402 51.0
BYD1_k127_2571970_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 531.0
BYD1_k127_2571970_3 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004313 402.0
BYD1_k127_2571970_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04565 GO:0000302,GO:0000303,GO:0000305,GO:0003674,GO:0003824,GO:0004784,GO:0005488,GO:0005507,GO:0005575,GO:0005576,GO:0005615,GO:0005623,GO:0006801,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008270,GO:0009636,GO:0009987,GO:0010035,GO:0016209,GO:0016491,GO:0016721,GO:0019430,GO:0030288,GO:0030313,GO:0031975,GO:0033554,GO:0034599,GO:0034614,GO:0042221,GO:0042597,GO:0043167,GO:0043169,GO:0044237,GO:0044421,GO:0044464,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0055114,GO:0070887,GO:0071450,GO:0071451,GO:0072593,GO:0097237,GO:0098754,GO:0098869,GO:1901700,GO:1901701,GO:1990748 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001001 283.0
BYD1_k127_2571970_5 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005279 281.0
BYD1_k127_2571970_6 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.0000000000000000000000000000000000000000000000000000000000000001255 228.0
BYD1_k127_2571970_7 Protein of unknown function (DUF1697) - - - 0.000000000000000000000000000000000000000000000000000000007233 203.0
BYD1_k127_2571970_8 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000005074 148.0
BYD1_k127_2571970_9 - - - - 0.00000000000003779 76.0
BYD1_k127_2597846_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 2.547e-242 756.0
BYD1_k127_2597846_1 PFAM Alcohol dehydrogenase zinc-binding domain protein K12957 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001372 490.0
BYD1_k127_2597846_10 protein conserved in bacteria K09954 - - 0.0000008472 51.0
BYD1_k127_2597846_2 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 436.0
BYD1_k127_2597846_3 GDP-mannose 4,6 dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 378.0
BYD1_k127_2597846_4 Conserved hypothetical protein (DUF2461) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004126 367.0
BYD1_k127_2597846_5 Zinc dependent phospholipase C - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000291 346.0
BYD1_k127_2597846_6 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000000000001875 219.0
BYD1_k127_2597846_7 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000004155 213.0
BYD1_k127_2597846_8 Tellurite resistance protein TerB - - - 0.00000000000000000000000000000000000000000000000000006342 190.0
BYD1_k127_2597846_9 - - - - 0.000000000000003225 82.0
BYD1_k127_266920_0 Molybdopterin oxidoreductase Fe4S4 domain - - - 2.197e-223 693.0
BYD1_k127_266920_1 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 329.0
BYD1_k127_266920_2 Domain of unknown function (DUF309) - - - 0.0000000000000000000000003485 112.0
BYD1_k127_2765599_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.877e-306 955.0
BYD1_k127_2765599_1 Poly(R)-hydroxyalkanoic acid synthase, class I K03821 - - 9.863e-249 779.0
BYD1_k127_2765599_10 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 366.0
BYD1_k127_2765599_11 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002517 365.0
BYD1_k127_2765599_12 ZIP Zinc transporter K16267 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002854 330.0
BYD1_k127_2765599_13 Multi-copper polyphenol oxidoreductase laccase K05810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 296.0
BYD1_k127_2765599_14 synthesis repressor, PhaR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001392 281.0
BYD1_k127_2765599_15 PFAM metal-dependent phosphohydrolase HD sub domain - - - 0.00000000000000000000000000000000000000000000000000001591 194.0
BYD1_k127_2765599_16 Bacterial protein of unknown function (DUF937) - - - 0.0000000000000000000000003685 115.0
BYD1_k127_2765599_17 - - - - 0.00000000000000003882 83.0
BYD1_k127_2765599_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 6.763e-221 691.0
BYD1_k127_2765599_3 glycolate oxidase subunit GlcD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001411 600.0
BYD1_k127_2765599_4 MOFRL family K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001391 582.0
BYD1_k127_2765599_5 Cache domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002638 536.0
BYD1_k127_2765599_6 Belongs to the short-chain dehydrogenases reductases (SDR) family K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 441.0
BYD1_k127_2765599_7 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00023 - 1.1.1.36 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007686 432.0
BYD1_k127_2765599_8 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004001 430.0
BYD1_k127_2765599_9 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 379.0
BYD1_k127_277719_0 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 3.919e-278 859.0
BYD1_k127_277719_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 1.291e-241 753.0
BYD1_k127_277719_2 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001925 629.0
BYD1_k127_277719_3 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 514.0
BYD1_k127_277719_4 May be involved in recombination K03554 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002434 363.0
BYD1_k127_277719_5 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001275 278.0
BYD1_k127_277719_6 Glycine zipper 2TM domain - - - 0.00000000000000000000000000000000000003826 154.0
BYD1_k127_277719_7 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.000000000000000000000000000000000002256 140.0
BYD1_k127_282130_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.0 1057.0
BYD1_k127_282130_1 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 3.176e-240 752.0
BYD1_k127_282130_2 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 589.0
BYD1_k127_282130_3 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000007096 211.0
BYD1_k127_282130_4 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000000000000000009575 127.0
BYD1_k127_282130_5 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000002401 94.0
BYD1_k127_2833995_0 Acyl-CoA synthetase (NDP forming) K09181 - - 0.0 1242.0
BYD1_k127_2833995_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002918 458.0
BYD1_k127_2833995_10 Acyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000005144 209.0
BYD1_k127_2833995_2 Catalyzes the transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA K06917 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001697 422.0
BYD1_k127_2833995_3 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 392.0
BYD1_k127_2833995_4 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 371.0
BYD1_k127_2833995_5 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 334.0
BYD1_k127_2833995_6 ABC transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004063 305.0
BYD1_k127_2833995_7 GDSL-like Lipase/Acylhydrolase family K10804 - 3.1.1.5 0.0000000000000000000000000000000000000000000000000000000000000000005019 240.0
BYD1_k127_2833995_8 tellurite resistance protein - - - 0.00000000000000000000000000000000000000000000000000000000000000004817 227.0
BYD1_k127_2833995_9 PFAM YaeQ family protein - - - 0.0000000000000000000000000000000000000000000000000000000000001414 216.0
BYD1_k127_2848582_0 Belongs to the ABC transporter superfamily K02031,K02032 - - 4.268e-313 976.0
BYD1_k127_2848582_1 Integrase, catalytic region - - - 7.788e-251 802.0
BYD1_k127_2848582_10 Oxidative deamination of D-amino acids K00285 - 1.4.5.1 8.963e-208 653.0
BYD1_k127_2848582_11 Tartrate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 604.0
BYD1_k127_2848582_12 threonine dehydratase K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 562.0
BYD1_k127_2848582_13 fad dependent oxidoreductase K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 568.0
BYD1_k127_2848582_14 Ornithine cyclodeaminase/mu-crystallin family K19244 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009103 527.0
BYD1_k127_2848582_15 Pfam:DUF955 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 523.0
BYD1_k127_2848582_16 Succinylglutamate desuccinylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 503.0
BYD1_k127_2848582_17 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000093 496.0
BYD1_k127_2848582_18 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 468.0
BYD1_k127_2848582_19 Haloacid dehalogenase-like hydrolase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006535 454.0
BYD1_k127_2848582_2 BFD domain protein 2Fe-2S -binding domain protein K10815 - 1.4.99.5 3.134e-250 780.0
BYD1_k127_2848582_20 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000083 449.0
BYD1_k127_2848582_21 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 441.0
BYD1_k127_2848582_22 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 400.0
BYD1_k127_2848582_23 Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG K03189 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009895 371.0
BYD1_k127_2848582_24 MotA/TolQ/ExbB proton channel family K03561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006737 348.0
BYD1_k127_2848582_25 Protein of unknown function (DUF861) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008072 342.0
BYD1_k127_2848582_26 Required for maturation of urease via the functional incorporation of the urease nickel metallocenter K03188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001269 269.0
BYD1_k127_2848582_27 Domain of unknown function (DUF4198) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002073 274.0
BYD1_k127_2848582_28 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase K01560 - 3.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000002384 265.0
BYD1_k127_2848582_29 Bacterial TniB protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009511 265.0
BYD1_k127_2848582_3 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.082e-247 771.0
BYD1_k127_2848582_30 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002135 252.0
BYD1_k127_2848582_31 Esterase of the alpha-beta hydrolase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000005336 251.0
BYD1_k127_2848582_32 Biopolymer transport protein ExbD/TolR K03559 - - 0.000000000000000000000000000000000000000000000000000000000008471 209.0
BYD1_k127_2848582_33 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000000000000004706 207.0
BYD1_k127_2848582_34 PFAM GCN5-related N-acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002311 208.0
BYD1_k127_2848582_35 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000000001885 194.0
BYD1_k127_2848582_36 - - - - 0.00000000000000000000000000000000000000000000000000001089 193.0
BYD1_k127_2848582_37 (sprot CYCP_CHRVI). CYTOCHROME C IS THE MOST WIDELY OCCURRING BACTERIAL C-TYPE CYTOCHROME. CYTOCHROMES C ARE HIGH-SPIN PROTEINS AND THE HEME HAS NO SIXTH LIGAND. THEIR EXACT FUNCTION IS NOT KNOWN - - - 0.000000000000000000000000000000000000000000000000002807 188.0
BYD1_k127_2848582_38 Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family K01428 - 3.5.1.5 0.000000000000000000000000000000000000000000000000004068 182.0
BYD1_k127_2848582_39 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000001789 177.0
BYD1_k127_2848582_4 PFAM Aldehyde dehydrogenase K00128,K00130 - 1.2.1.3,1.2.1.8 2.384e-246 769.0
BYD1_k127_2848582_40 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.0000000000000000000000000000000000000000002715 160.0
BYD1_k127_2848582_41 translation initiation inhibitor, yjgF family - - - 0.0000000000000000000000000000000000000003229 153.0
BYD1_k127_2848582_42 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 0.00000000000000000000000000000000009679 141.0
BYD1_k127_2848582_43 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000001313 124.0
BYD1_k127_2848582_44 outer membrane autotransporter barrel - - - 0.000000000000000000000000003928 132.0
BYD1_k127_2848582_45 TniQ - - - 0.00000000000000000001229 106.0
BYD1_k127_2848582_46 ornithine cyclodeaminase K01750 - 4.3.1.12 0.00000000000000002101 88.0
BYD1_k127_2848582_47 SMART Helix-turn-helix type 3 - - - 0.0000000000006201 74.0
BYD1_k127_2848582_48 Prokaryotic E2 family C - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000001099 81.0
BYD1_k127_2848582_49 N-6 DNA Methylase K03427 - 2.1.1.72 0.000000003413 61.0
BYD1_k127_2848582_5 fad dependent oxidoreductase - - - 5.597e-246 763.0
BYD1_k127_2848582_50 Transposase DDE domain group 1 - - - 0.0000003626 54.0
BYD1_k127_2848582_51 Prokaryotic homologs of the JAB domain - - - 0.00001651 53.0
BYD1_k127_2848582_52 Protein of unknown function (DUF1624) - - - 0.0001178 46.0
BYD1_k127_2848582_6 Aminotransferase class-III - - - 1.073e-231 724.0
BYD1_k127_2848582_7 TonB dependent receptor K02014 - - 7.796e-228 727.0
BYD1_k127_2848582_8 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 9.403e-225 705.0
BYD1_k127_2848582_9 Aspartate ammonia-lyase K01744 - 4.3.1.1 4.578e-219 687.0
BYD1_k127_288454_0 Bacterial DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1388.0
BYD1_k127_288454_1 Aldehyde dehydrogenase family K00128,K22445 - 1.2.1.3,1.2.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 566.0
BYD1_k127_288454_2 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 557.0
BYD1_k127_288454_3 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005898 289.0
BYD1_k127_288454_4 TIGRFAM channel protein, hemolysin III family K11068 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005665 263.0
BYD1_k127_288454_5 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000000000000000000004197 195.0
BYD1_k127_288454_6 cytochrome - - - 0.000000000000000000000000000000000000000002372 160.0
BYD1_k127_288454_7 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000003741 143.0
BYD1_k127_288454_8 Protein of unknown function (DUF2591) - - - 0.00001841 52.0
BYD1_k127_2884879_0 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 542.0
BYD1_k127_2884879_1 Belongs to the UPF0758 family K03630 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 314.0
BYD1_k127_2884879_2 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000005656 264.0
BYD1_k127_2884879_3 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.0000005539 52.0
BYD1_k127_2929976_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0 1105.0
BYD1_k127_2929976_1 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02652 - - 1.116e-251 793.0
BYD1_k127_2929976_10 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000000000000000000000001462 207.0
BYD1_k127_2929976_11 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000001405 190.0
BYD1_k127_2929976_12 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000006086 202.0
BYD1_k127_2929976_13 Putative regulatory protein - - - 0.0000000000000000000000000000000000003061 141.0
BYD1_k127_2929976_14 ribonuclease K01167 - 3.1.27.3 0.000000000000000000000000000000000000662 143.0
BYD1_k127_2929976_15 Barstar (barnase inhibitor) - - - 0.00000000000000000000000000000000006432 141.0
BYD1_k127_2929976_16 Cysteine-rich CWC - - - 0.0000000003022 63.0
BYD1_k127_2929976_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.539e-231 723.0
BYD1_k127_2929976_3 type II secretion system protein K02653 - - 6.031e-194 611.0
BYD1_k127_2929976_4 Transporter associated domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008645 531.0
BYD1_k127_2929976_5 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001545 418.0
BYD1_k127_2929976_6 Cytochrome C assembly protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000213 316.0
BYD1_k127_2929976_7 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005776 282.0
BYD1_k127_2929976_8 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007945 274.0
BYD1_k127_2929976_9 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000007298 244.0
BYD1_k127_2934862_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 7.302e-311 969.0
BYD1_k127_2934862_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 2.252e-199 638.0
BYD1_k127_2934862_10 Proton-conducting membrane transporter - - - 0.00000000000000000000000000000000000000001518 154.0
BYD1_k127_2934862_11 Gram-negative-bacterium-type cell outer membrane assembly K21572 - - 0.0000000000000000000000000000000000000003132 156.0
BYD1_k127_2934862_12 Domain of unknown function (DU1801) K00784 - 3.1.26.11 0.0000000000000000000000000000000001689 137.0
BYD1_k127_2934862_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000001405 61.0
BYD1_k127_2934862_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002285 512.0
BYD1_k127_2934862_3 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 327.0
BYD1_k127_2934862_4 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 308.0
BYD1_k127_2934862_5 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004016 296.0
BYD1_k127_2934862_6 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001032 290.0
BYD1_k127_2934862_7 Respiratory-chain NADH dehydrogenase, 30 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000371 270.0
BYD1_k127_2934862_8 PFAM GCN5-related N-acetyltransferase K03824 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006343 250.0
BYD1_k127_2934862_9 Excalibur calcium-binding domain - - - 0.000000000000000000000000000000000000000000000000000003602 199.0
BYD1_k127_300476_0 Proton-conducting membrane transporter - - - 8.047e-233 730.0
BYD1_k127_300476_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001427 565.0
BYD1_k127_300476_2 NADH ubiquinone oxidoreductase, 20 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000005071 236.0
BYD1_k127_300476_3 hydrogenase 4 membrane K12140 - - 0.000000003472 57.0
BYD1_k127_3011672_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1528.0
BYD1_k127_3011672_1 Protein of unknown function (DUF1015) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002939 578.0
BYD1_k127_3011672_10 Allergen V5 Tpx-1 family protein - - - 0.0000000000000000000000000000000000001372 148.0
BYD1_k127_3011672_11 Nuclear protein SET K07117 - - 0.000000000000000000000009693 107.0
BYD1_k127_3011672_12 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000002913 103.0
BYD1_k127_3011672_13 Chemoreceptor zinc-binding domain - - - 0.000000000000000000004514 97.0
BYD1_k127_3011672_2 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 564.0
BYD1_k127_3011672_3 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000352 528.0
BYD1_k127_3011672_4 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005492 514.0
BYD1_k127_3011672_5 Domain of unknown function (DUF2437) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000552 349.0
BYD1_k127_3011672_6 Chemotaxis sensory transducer K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003917 331.0
BYD1_k127_3011672_7 DSBA Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 283.0
BYD1_k127_3011672_8 phosphoglycerate mutase K15634 - 5.4.2.12 0.0000000000000000000000000000000000000000000000000000000000000001231 230.0
BYD1_k127_3011672_9 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000002917 167.0
BYD1_k127_30410_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 9.872e-233 725.0
BYD1_k127_30410_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 2.294e-221 691.0
BYD1_k127_30410_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005218 441.0
BYD1_k127_30410_11 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 441.0
BYD1_k127_30410_12 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005583 361.0
BYD1_k127_30410_13 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 346.0
BYD1_k127_30410_14 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 344.0
BYD1_k127_30410_15 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001129 329.0
BYD1_k127_30410_16 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007947 316.0
BYD1_k127_30410_17 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000001684 239.0
BYD1_k127_30410_18 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496 - 3.5.4.19 0.000000000000000000000000000000000000000000000000000000000000000002046 231.0
BYD1_k127_30410_19 ABC-type transport system involved in resistance to organic solvents, auxiliary component K07323 - - 0.000000000000000000000000000000000000000000000000001694 185.0
BYD1_k127_30410_2 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 4.193e-218 714.0
BYD1_k127_30410_20 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.00000000000000000000000000000000000000000000001797 178.0
BYD1_k127_30410_21 phenylacetic acid degradation protein K02614 - - 0.000000000000000000000000000000000000000000002007 169.0
BYD1_k127_30410_22 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000000000000001073 168.0
BYD1_k127_30410_23 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000000000000000009149 139.0
BYD1_k127_30410_24 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000000004188 111.0
BYD1_k127_30410_25 diguanylate cyclase activity - - - 0.0000000000000000000000001478 123.0
BYD1_k127_30410_26 NTP binding protein (Contains STAS domain) K04749,K07122 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0033554,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0046677,GO:0050896,GO:0051716 - 0.00000000002221 67.0
BYD1_k127_30410_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 7.437e-206 651.0
BYD1_k127_30410_4 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 - 1.1.1.23 1.038e-203 654.0
BYD1_k127_30410_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 575.0
BYD1_k127_30410_6 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000533 525.0
BYD1_k127_30410_7 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 514.0
BYD1_k127_30410_8 PFAM GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 534.0
BYD1_k127_30410_9 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001209 503.0
BYD1_k127_309710_0 PUA-like domain K00958 - 2.7.7.4 1.794e-238 742.0
BYD1_k127_309710_1 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000427 504.0
BYD1_k127_309710_2 Adenosine-5'-phosphosulfate reductase beta subunit K00395 - 1.8.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 316.0
BYD1_k127_309710_3 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000007127 248.0
BYD1_k127_309710_4 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.0000000000000000000000000000000000000000000000000000000002899 209.0
BYD1_k127_309710_5 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000001114 183.0
BYD1_k127_309710_6 FAD binding domain K00394 - 1.8.99.2 0.00000000000000000000000000000000000000000000001589 171.0
BYD1_k127_309710_7 sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000002363 173.0
BYD1_k127_309710_8 AntiSigma factor - - - 0.000000000000000000000000000000000002329 149.0
BYD1_k127_309710_9 Sulphur oxidation protein SoxZ K17227 - - 0.00000000000000000000000000000005039 133.0
BYD1_k127_3185459_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1461.0
BYD1_k127_3185459_1 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1176.0
BYD1_k127_3185459_10 Belongs to the ABC transporter superfamily K02031,K02032,K13896 - - 4.971e-214 690.0
BYD1_k127_3185459_11 amino acid K01999 - - 1.111e-206 647.0
BYD1_k127_3185459_12 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 2.888e-198 631.0
BYD1_k127_3185459_13 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002642 584.0
BYD1_k127_3185459_14 PFAM binding-protein-dependent transport systems inner membrane component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 586.0
BYD1_k127_3185459_15 Male sterility protein K02473 - 5.1.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004623 567.0
BYD1_k127_3185459_16 PFAM binding-protein-dependent transport systems inner membrane component K13895 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007013 555.0
BYD1_k127_3185459_17 COG2148 Sugar transferases involved in lipopolysaccharide synthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 550.0
BYD1_k127_3185459_18 Cysteine desulfurase K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 503.0
BYD1_k127_3185459_19 AFG1-like ATPase K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 482.0
BYD1_k127_3185459_2 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 5e-324 1005.0
BYD1_k127_3185459_20 General secretion pathway protein F K02455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004549 475.0
BYD1_k127_3185459_21 fumarate reductase iron-sulfur protein K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005347 437.0
BYD1_k127_3185459_22 Polysaccharide chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 440.0
BYD1_k127_3185459_23 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000854 437.0
BYD1_k127_3185459_24 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 418.0
BYD1_k127_3185459_25 Belongs to the inositol monophosphatase superfamily K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 414.0
BYD1_k127_3185459_26 serine acetyltransferase K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002628 398.0
BYD1_k127_3185459_27 transcriptional K03710 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005799 389.0
BYD1_k127_3185459_28 COG3267 Type II secretory pathway, component ExeA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006294 395.0
BYD1_k127_3185459_29 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 359.0
BYD1_k127_3185459_3 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 6.914e-304 941.0
BYD1_k127_3185459_30 xylanase chitin deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008803 353.0
BYD1_k127_3185459_31 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 357.0
BYD1_k127_3185459_32 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005671 336.0
BYD1_k127_3185459_33 Glycosyl transferase family 21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 331.0
BYD1_k127_3185459_34 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 319.0
BYD1_k127_3185459_35 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009562 318.0
BYD1_k127_3185459_36 PFAM TatD-related deoxyribonuclease K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003271 318.0
BYD1_k127_3185459_37 AAA domain K08252,K16692 - 2.7.10.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005919 311.0
BYD1_k127_3185459_38 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002129 297.0
BYD1_k127_3185459_39 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000007883 287.0
BYD1_k127_3185459_4 PFAM extracellular solute-binding protein, family 5 K02035,K13893 - - 7.303e-237 746.0
BYD1_k127_3185459_40 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000025 292.0
BYD1_k127_3185459_41 Type II secretion system (T2SS), protein K K02460 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005078 281.0
BYD1_k127_3185459_42 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006121 276.0
BYD1_k127_3185459_43 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001311 279.0
BYD1_k127_3185459_44 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000000005549 250.0
BYD1_k127_3185459_45 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000009606 241.0
BYD1_k127_3185459_46 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000004669 231.0
BYD1_k127_3185459_47 TIGRFAM PEP-CTERM system associated protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000007074 248.0
BYD1_k127_3185459_48 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000002083 240.0
BYD1_k127_3185459_49 FKBP-type peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000009679 232.0
BYD1_k127_3185459_5 UDP binding domain - - - 2.007e-236 736.0
BYD1_k127_3185459_50 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.0000000000000000000000000000000000000000000000000000000000000001095 225.0
BYD1_k127_3185459_51 coenzyme F390 K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000002963 234.0
BYD1_k127_3185459_52 general secretion pathway protein G K02456 - - 0.000000000000000000000000000000000000000000000000000000000000006205 225.0
BYD1_k127_3185459_53 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000007423 226.0
BYD1_k127_3185459_54 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000003411 216.0
BYD1_k127_3185459_55 COG0438 Glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000005821 203.0
BYD1_k127_3185459_56 Ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.00000000000000000000000000000000000000000000000000008697 192.0
BYD1_k127_3185459_57 Belongs to the HesB IscA family K13628 - - 0.0000000000000000000000000000000000000000000000000001632 193.0
BYD1_k127_3185459_58 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000000000005068 190.0
BYD1_k127_3185459_59 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.0000000000000000000000000000000000000000000000000022 184.0
BYD1_k127_3185459_6 Belongs to the citrate synthase family K01647 - 2.3.3.1 3.441e-231 720.0
BYD1_k127_3185459_60 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000003126 196.0
BYD1_k127_3185459_61 Ankyrin repeat - - - 0.000000000000000000000000000000000000000000000000006546 199.0
BYD1_k127_3185459_62 Succinate dehydrogenase, hydrophobic K00242 - - 0.000000000000000000000000000000000000000000001498 170.0
BYD1_k127_3185459_63 GspL periplasmic domain K02461 - - 0.000000000000000000000000000000000000000002905 172.0
BYD1_k127_3185459_64 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.000000000000000000000000000000000000001051 151.0
BYD1_k127_3185459_65 Polysaccharide biosynthesis protein - - - 0.0000000000000000000000000000000000422 151.0
BYD1_k127_3185459_66 Polysaccharide deacetylase K22278 - 3.5.1.104 0.00000000000000000000000000000000008993 141.0
BYD1_k127_3185459_67 Type II secretion system (T2SS), protein N K02463 - - 0.000000000000000000000000000000003289 139.0
BYD1_k127_3185459_68 O-Antigen ligase - - - 0.00000000000000000000000000000001709 141.0
BYD1_k127_3185459_69 PKD domain - - - 0.00000000000000000000000000000007161 143.0
BYD1_k127_3185459_7 COG1249 Pyruvate 2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes K00382 - 1.8.1.4 2.826e-230 721.0
BYD1_k127_3185459_70 PKD domain - - - 0.00000000000000000000000000000007249 144.0
BYD1_k127_3185459_71 FeS assembly protein IscX - - - 0.000000000000000000000000000002587 123.0
BYD1_k127_3185459_72 Type II secretion system (T2SS), protein I K02458 - - 0.000000000000000000000000000008974 125.0
BYD1_k127_3185459_73 Type II secretion system (T2SS), protein J K02459 - - 0.0000000000000000000000000003156 122.0
BYD1_k127_3185459_74 Periplasmic copper-binding protein (NosD) K07218 - - 0.0000000000000001814 94.0
BYD1_k127_3185459_75 Flavinator of succinate dehydrogenase K09159 - - 0.000000000000001103 79.0
BYD1_k127_3185459_76 Type II secretion system protein C K02452 - - 0.00000000000002456 81.0
BYD1_k127_3185459_77 WD40 repeat, subgroup - - - 0.0000000000000826 85.0
BYD1_k127_3185459_78 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 0.00000003113 55.0
BYD1_k127_3185459_79 Aminoglycoside phosphotransferase - - - 0.000003006 60.0
BYD1_k127_3185459_8 COG1450 Type II secretory pathway, component PulD K02453 - - 1.668e-221 707.0
BYD1_k127_3185459_80 general secretion pathway protein K02457 - - 0.00004291 52.0
BYD1_k127_3185459_9 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 1.041e-219 685.0
BYD1_k127_3227155_0 DbpA RNA binding domain K05591 GO:0000339,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003725,GO:0003729,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006412,GO:0006413,GO:0006518,GO:0006725,GO:0006807,GO:0008026,GO:0008135,GO:0008150,GO:0008152,GO:0008186,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010468,GO:0010501,GO:0016070,GO:0016281,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0042623,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0060255,GO:0065007,GO:0070035,GO:0071704,GO:0090304,GO:0097159,GO:0140098,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576 3.6.4.13 1.739e-208 657.0
BYD1_k127_3227155_1 ABC transporter K06158 - - 5.449e-199 630.0
BYD1_k127_3227155_10 PFAM Glyoxalase bleomycin resistance protein dioxygenase K06996 - - 0.00000000000000000000000000000000000000000000000003051 182.0
BYD1_k127_3227155_12 Phospholipid methyltransferase - - - 0.000000000000000000000000000000004035 133.0
BYD1_k127_3227155_13 - - - - 0.000000000000000000000000001735 112.0
BYD1_k127_3227155_2 PFAM Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008095 573.0
BYD1_k127_3227155_3 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 536.0
BYD1_k127_3227155_4 metal-dependent phosphohydrolase, HD sub domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000527 393.0
BYD1_k127_3227155_5 Acyl carrier protein phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000631 271.0
BYD1_k127_3227155_6 Prokaryotic cytochrome b561 K12262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001782 269.0
BYD1_k127_3227155_7 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002098 262.0
BYD1_k127_3227155_8 Phosphatidylethanolamine-binding protein K06910 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001036 256.0
BYD1_k127_3227155_9 glyoxalase K07032 - - 0.00000000000000000000000000000000000000000000000000000000000001168 234.0
BYD1_k127_3245592_0 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 1.33e-236 740.0
BYD1_k127_3245592_1 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 489.0
BYD1_k127_3245592_2 glutamine synthetase K01915 - 6.3.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003249 309.0
BYD1_k127_3245592_3 Biotin/lipoate A/B protein ligase family K03524 - 6.3.4.15 0.00000000000000000000000000000000000000000000000000000000009837 227.0
BYD1_k127_3245592_4 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000000000009511 143.0
BYD1_k127_3245592_5 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000000007067 137.0
BYD1_k127_3298964_0 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 427.0
BYD1_k127_3298964_1 RNA-binding S4 domain-containing protein K06442 - 2.1.1.226,2.1.1.227 0.0000000000000000000000000000000000000000000000000000000001113 207.0
BYD1_k127_3298964_2 Glutaredoxin - - - 0.000000000000000000000000000000000000000000000000000006149 195.0
BYD1_k127_3298964_3 Cyclic nucleotide-monophosphate binding domain K01420 - - 0.000000003939 58.0
BYD1_k127_3343662_0 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 6.865e-244 767.0
BYD1_k127_3343662_1 metal ion transport K14445 - - 2.702e-210 663.0
BYD1_k127_3343662_2 Sulfate transporter antisigma-factor antagonist STAS - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003265 260.0
BYD1_k127_3343662_3 PFAM CBS domain containing protein - - - 0.0000000001942 68.0
BYD1_k127_3344987_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 4.689e-268 838.0
BYD1_k127_3344987_1 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 627.0
BYD1_k127_3344987_10 PFAM pyruvate ferredoxin flavodoxin oxidoreductase K00180 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 301.0
BYD1_k127_3344987_11 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007389 261.0
BYD1_k127_3344987_12 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000006656 201.0
BYD1_k127_3344987_13 preprotein translocase subunit YajC K03210 - - 0.0000000000000000000000000000000000000000001578 163.0
BYD1_k127_3344987_14 acetylesterase activity - - - 0.0000000000000000006534 98.0
BYD1_k127_3344987_2 protein containing a von Willebrand factor type A (vWA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 604.0
BYD1_k127_3344987_3 AAA domain (dynein-related subfamily) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 568.0
BYD1_k127_3344987_4 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001241 534.0
BYD1_k127_3344987_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 469.0
BYD1_k127_3344987_6 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 446.0
BYD1_k127_3344987_7 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000614 445.0
BYD1_k127_3344987_8 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 375.0
BYD1_k127_3344987_9 Putative heavy-metal chelation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 320.0
BYD1_k127_3405712_0 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.294e-305 955.0
BYD1_k127_3405712_1 HAF family - - - 1.067e-206 663.0
BYD1_k127_3405712_2 HAF family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001004 435.0
BYD1_k127_3405712_3 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002346 388.0
BYD1_k127_3405712_4 Yip1 domain - - - 0.0000000000000000000000000000000000000000000000000001561 193.0
BYD1_k127_3405712_5 OmpA family - - - 0.0000000000000000000000000000000000000000003706 170.0
BYD1_k127_3405712_6 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000001579 169.0
BYD1_k127_3405712_7 - - - - 0.0000000000000000000000000000002747 128.0
BYD1_k127_3405958_0 HAF family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 422.0
BYD1_k127_3405958_1 PFAM regulatory protein LuxR - - - 0.0000000000000000000000000000000000000000000001146 181.0
BYD1_k127_3405958_2 HAF family - - - 0.000000000001224 68.0
BYD1_k127_3437679_0 Cytochrome c554 and c-prime - - - 2.275e-293 914.0
BYD1_k127_3437679_1 Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process K03385 GO:0003674,GO:0003824,GO:0005488,GO:0005509,GO:0005575,GO:0005623,GO:0006807,GO:0008150,GO:0008152,GO:0016491,GO:0016661,GO:0016662,GO:0020037,GO:0042279,GO:0042597,GO:0043167,GO:0043169,GO:0044464,GO:0046872,GO:0046906,GO:0048037,GO:0055114,GO:0097159,GO:0097164,GO:0098809,GO:1901363 1.7.2.2 5.004e-211 671.0
BYD1_k127_3437679_2 Cytochrome c-type biogenesis protein CcmF K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000294 544.0
BYD1_k127_3437679_3 Cytochrome c K02198 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007971 280.0
BYD1_k127_3437679_4 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001257 248.0
BYD1_k127_3437679_5 Cytochrome c, class I - - - 0.00000000000000000000000000000000000000000000000005305 184.0
BYD1_k127_3437679_6 Cytochrome c-type biogenesis protein K02200 - - 0.000000000000000000000000000000000001902 147.0
BYD1_k127_3437679_7 Pfam cytochrome c K08738 - - 0.00000000000000000000000002221 125.0
BYD1_k127_3437679_8 Protein of unknown function (DUF1566) - - - 0.000000000000000000000001748 113.0
BYD1_k127_3439042_0 Putative diguanylate phosphodiesterase - - - 4.373e-295 929.0
BYD1_k127_3439042_1 Alanine dehydrogenase/PNT, N-terminal domain K00324 - 1.6.1.2 9.429e-275 852.0
BYD1_k127_3439042_10 Mediates influx of magnesium ions K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 414.0
BYD1_k127_3439042_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 325.0
BYD1_k127_3439042_12 phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 301.0
BYD1_k127_3439042_13 Acyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005397 300.0
BYD1_k127_3439042_14 RDD family - - - 0.00000000000000000000000000000000000000000000000000000000003615 209.0
BYD1_k127_3439042_15 - - - - 0.0000000000000000000000000000000000000000000000000000000001534 214.0
BYD1_k127_3439042_16 Peptidyl-prolyl cis-trans K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000004862 201.0
BYD1_k127_3439042_17 deaminase zinc-binding - - - 0.00000000000000000000000000000000000000000000000000000002668 204.0
BYD1_k127_3439042_18 MaoC like domain - - - 0.000000000000000000000000000000000000001438 153.0
BYD1_k127_3439042_19 Peptidase S24-like - - - 0.0000000000000000000000000000006328 127.0
BYD1_k127_3439042_2 Asparagine synthase K01953 - 6.3.5.4 4.296e-263 827.0
BYD1_k127_3439042_20 - - - - 0.0000000000000000000000000000232 122.0
BYD1_k127_3439042_21 - - - - 0.0000000000000009228 79.0
BYD1_k127_3439042_22 - - - - 0.000000000000001662 78.0
BYD1_k127_3439042_3 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 7.344e-249 775.0
BYD1_k127_3439042_4 Glycolate oxidase subunit GlcD K00104 - 1.1.3.15 1.544e-237 742.0
BYD1_k127_3439042_5 glycolate oxidase iron-sulfur subunit K11473 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006661 578.0
BYD1_k127_3439042_6 PFAM Aminotransferase class I and II K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008438 517.0
BYD1_k127_3439042_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 446.0
BYD1_k127_3439042_8 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005743 433.0
BYD1_k127_3439042_9 FAD binding domain K00104,K11472 - 1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 437.0
BYD1_k127_3464178_0 Receptor family ligand binding region K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 533.0
BYD1_k127_3464178_1 A G-specific K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002319 428.0
BYD1_k127_3464178_2 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 333.0
BYD1_k127_3471635_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1004.0
BYD1_k127_3471635_1 PFAM isocitrate lyase and phosphorylmutase K01637 - 4.1.3.1 3.32e-270 833.0
BYD1_k127_3471635_10 Response regulator receiver K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 490.0
BYD1_k127_3471635_11 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005718 496.0
BYD1_k127_3471635_12 Chemotaxis signal transduction protein K03415 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007706 480.0
BYD1_k127_3471635_13 flagellar motor switch protein K02416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 479.0
BYD1_k127_3471635_14 flagellar motor K02556 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004592 470.0
BYD1_k127_3471635_15 Flagellar biosynthesis regulator FlhF K02404 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002084 468.0
BYD1_k127_3471635_16 flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003972 425.0
BYD1_k127_3471635_17 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007838 428.0
BYD1_k127_3471635_18 Flagellar basal body rod FlgEFG protein C-terminal K02390 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 424.0
BYD1_k127_3471635_19 Belongs to the flagella basal body rod proteins family K02392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002837 410.0
BYD1_k127_3471635_2 Glycosyltransferase like family 2 K20444 - - 7.897e-242 792.0
BYD1_k127_3471635_20 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005282 414.0
BYD1_k127_3471635_21 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 394.0
BYD1_k127_3471635_22 His Kinase A (phosphoacceptor) domain K10942 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006739 385.0
BYD1_k127_3471635_23 flagellar motor K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003484 371.0
BYD1_k127_3471635_24 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 346.0
BYD1_k127_3471635_25 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007588 357.0
BYD1_k127_3471635_26 Belongs to the bacterial flagellin family K02397 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 343.0
BYD1_k127_3471635_27 basal body rod protein K02391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002542 332.0
BYD1_k127_3471635_28 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003574 331.0
BYD1_k127_3471635_29 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 326.0
BYD1_k127_3471635_3 ATPase FliI YscN family K02412 - 3.6.3.14 1.048e-214 685.0
BYD1_k127_3471635_30 repeat-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 316.0
BYD1_k127_3471635_31 Flagellar motor protein K02557 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004408 301.0
BYD1_k127_3471635_32 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002639 297.0
BYD1_k127_3471635_33 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000136 287.0
BYD1_k127_3471635_34 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001521 282.0
BYD1_k127_3471635_35 Nudix N-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002252 276.0
BYD1_k127_3471635_36 Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02402 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003914 274.0
BYD1_k127_3471635_37 2-hydroxy-3-oxopropionate reductase K00042 - 1.1.1.60 0.0000000000000000000000000000000000000000000000000000000000000000000000001652 249.0
BYD1_k127_3471635_38 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000000000000000000000002686 244.0
BYD1_k127_3471635_39 Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004519 246.0
BYD1_k127_3471635_4 Signal transducing histidine kinase, homodimeric domain K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000399 615.0
BYD1_k127_3471635_40 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000000000000000000000000000000000000000000000000009704 246.0
BYD1_k127_3471635_41 response regulator K03413 - - 0.000000000000000000000000000000000000000000000000000000000000000000387 229.0
BYD1_k127_3471635_42 WxcM-like, C-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000001155 230.0
BYD1_k127_3471635_43 Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions K02553 - - 0.000000000000000000000000000000000000000000000000000000000000000001377 231.0
BYD1_k127_3471635_44 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.0000000000000000000000000000000000000000000000000000000000000001815 229.0
BYD1_k127_3471635_45 Flagellar hook-length control protein FliK - - - 0.00000000000000000000000000000000000000000000000000000000000001582 229.0
BYD1_k127_3471635_46 Flagellar hook capping protein - N-terminal region K02389 - - 0.0000000000000000000000000000000000000000000000000002067 193.0
BYD1_k127_3471635_47 Flagellar motor switch K02417 - - 0.0000000000000000000000000000000000000000000000000006038 187.0
BYD1_k127_3471635_48 Belongs to the flagella basal body rod proteins family K02388 - - 0.00000000000000000000000000000000000000000000000009854 181.0
BYD1_k127_3471635_49 COG1317 Flagellar biosynthesis type III secretory pathway protein K02411 - - 0.000000000000000000000000000000000000000000001501 171.0
BYD1_k127_3471635_5 Flagellar basal body rod FlgEFG protein C-terminal K02396 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 602.0
BYD1_k127_3471635_50 Belongs to the ParA family K04562 - - 0.0000000000000000000000000000000000000004905 159.0
BYD1_k127_3471635_51 Flagellar export protein FliJ K02413 - - 0.0000000000000000000000000000000000000009819 153.0
BYD1_k127_3471635_52 Role in flagellar biosynthesis K02420 - - 0.000000000000000000000000000000000000005102 148.0
BYD1_k127_3471635_53 Controls the rotational direction of flagella during chemotaxis K02415 - - 0.000000000000000000000000000000000000006955 152.0
BYD1_k127_3471635_54 Flagellar protein FliS K02422 - - 0.000000000000000000000000000000000001591 150.0
BYD1_k127_3471635_55 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000000000000000000000000000000008991 139.0
BYD1_k127_3471635_56 cytoplasmic domain of flagellar protein FhlB K04061 - - 0.0000000000000000000000000000005829 124.0
BYD1_k127_3471635_57 Flagellar hook-basal body K02408 - - 0.000000000000000000000000000001365 124.0
BYD1_k127_3471635_58 Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non-flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways K02403 - - 0.000000000000000000000000000002426 126.0
BYD1_k127_3471635_59 - - - - 0.00000000000000000000000002697 119.0
BYD1_k127_3471635_6 The M ring may be actively involved in energy transduction K02409 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 546.0
BYD1_k127_3471635_60 Glycosyltransferase like family 2 - - - 0.000000000000000000000002859 121.0
BYD1_k127_3471635_61 Flagellar hook-length control protein K02414 - - 0.00000000000000000000009559 112.0
BYD1_k127_3471635_62 flagellar K02418 - - 0.000000000000000000002162 100.0
BYD1_k127_3471635_63 Flagellar protein FliT K02423 - - 0.0000000000000000006702 92.0
BYD1_k127_3471635_64 FlgN protein K02399 - - 0.00000000000000004007 88.0
BYD1_k127_3471635_65 negative regulator of flagellin synthesis K02398 - - 0.00000000000002644 76.0
BYD1_k127_3471635_66 PFAM Flagellar protein FlaG protein K06603 - - 0.0000000000002038 76.0
BYD1_k127_3471635_67 Sulfotransferase domain - - - 0.000000001749 69.0
BYD1_k127_3471635_68 SEC-C motif K09858 - - 0.0005637 52.0
BYD1_k127_3471635_7 Sigma-54 interaction domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 520.0
BYD1_k127_3471635_8 flagellar motor switch protein K02410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001777 502.0
BYD1_k127_3471635_9 Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella K02406 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 504.0
BYD1_k127_3497470_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 1.228e-216 682.0
BYD1_k127_3497470_1 RNA polymerase sigma K03089 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001627 245.0
BYD1_k127_3497470_2 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.00000000000000000000000000000000000000000000000000000000000008244 216.0
BYD1_k127_3497470_3 - - - - 0.000000000000000000000000000000000000000000000000000000002577 206.0
BYD1_k127_3497470_4 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000000001474 201.0
BYD1_k127_3626506_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1030.0
BYD1_k127_3626506_1 carboxylase K01965 - 6.4.1.3 0.0 1018.0
BYD1_k127_3626506_10 signal transduction protein containing EAL and modified HD-GYP domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 428.0
BYD1_k127_3626506_11 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003379 411.0
BYD1_k127_3626506_12 Neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007701 382.0
BYD1_k127_3626506_13 branched-chain amino acid K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000885 364.0
BYD1_k127_3626506_14 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 304.0
BYD1_k127_3626506_15 Lactoylglutathione lyase K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001721 282.0
BYD1_k127_3626506_16 ABC transporter, phosphonate, periplasmic substrate-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000001377 233.0
BYD1_k127_3626506_17 - - - - 0.000000000000000000000000000000000000000000000002973 184.0
BYD1_k127_3626506_18 - - - - 0.0000000000000000000000000000000000000000001032 170.0
BYD1_k127_3626506_19 - - - - 0.000000000000000000000000000000000000000003749 166.0
BYD1_k127_3626506_2 PFAM carboxyl transferase K01966 - 2.1.3.15,6.4.1.3 5.279e-306 941.0
BYD1_k127_3626506_20 Cytochrome c K08738 - - 0.00000000000000000000000225 114.0
BYD1_k127_3626506_21 COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases K00523 - 1.17.1.1 0.000000000000000008923 83.0
BYD1_k127_3626506_3 Methylmalonyl-CoA mutase K01847 - 5.4.99.2 8.275e-266 825.0
BYD1_k127_3626506_4 Protein of unknown function, DUF255 K06888 - - 2.799e-217 689.0
BYD1_k127_3626506_5 Putative diguanylate phosphodiesterase K03320 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 571.0
BYD1_k127_3626506_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000699 536.0
BYD1_k127_3626506_7 amino acid K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 516.0
BYD1_k127_3626506_8 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 476.0
BYD1_k127_3626506_9 periplasmic protein kinase ArgK and related GTPases of G3E family K07588 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007819 440.0
BYD1_k127_3671632_0 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696,K06001 - 4.2.1.20 2.995e-222 692.0
BYD1_k127_3671632_1 Domain of unknown function (DUF4139) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004122 435.0
BYD1_k127_3686742_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 6.463e-236 737.0
BYD1_k127_3686742_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 473.0
BYD1_k127_3686742_2 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008183 271.0
BYD1_k127_3686742_3 Rhodanese-like domain - - - 0.0000000000000000000000000000000006627 134.0
BYD1_k127_3695383_0 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 355.0
BYD1_k127_3695383_1 transposase IS116 IS110 IS902 family K07486 - - 0.000000000000000000000000000000000004029 141.0
BYD1_k127_3695383_2 - - - - 0.000000000000007811 79.0
BYD1_k127_3695383_3 Transposase K07486 - - 0.0000000000002137 75.0
BYD1_k127_3695383_4 PFAM Transposase, IS116 IS110 IS902 - - - 0.000000000004629 68.0
BYD1_k127_3707386_0 Formyl transferase, C-terminal domain K19640 - - 9.237e-273 860.0
BYD1_k127_3707386_1 Belongs to the HypD family K04654 - - 1.012e-215 676.0
BYD1_k127_3707386_10 Hydrogenase assembly chaperone hypC hupF K04653 - - 0.00000000000000000000000000001498 120.0
BYD1_k127_3707386_11 Hydrogenase-1 expression protein HyaE K03619 - - 0.00000000000000000000001082 113.0
BYD1_k127_3707386_12 HupF/HypC family K04653 - - 0.000000000000000000000769 100.0
BYD1_k127_3707386_13 Rubredoxin - - - 0.000000000000000006403 96.0
BYD1_k127_3707386_2 hydrogenase expression formation protein HypE K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 556.0
BYD1_k127_3707386_3 CobW/HypB/UreG, nucleotide-binding domain K04652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004136 381.0
BYD1_k127_3707386_4 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 376.0
BYD1_k127_3707386_5 Hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001504 276.0
BYD1_k127_3707386_6 PFAM HupH hydrogenase expression protein K03618 - - 0.00000000000000000000000000000000000000000000000000000000000002439 228.0
BYD1_k127_3707386_7 Prokaryotic cytochrome b561 K03620 - - 0.00000000000000000000000000000000000000000000000000000000003644 205.0
BYD1_k127_3707386_8 Probably plays a role in a hydrogenase nickel cofactor insertion step K04651 - - 0.00000000000000000000000000000000000000000001975 164.0
BYD1_k127_3707386_9 [NiFe]-hydrogenase assembly, chaperone, HybE - - - 0.0000000000000000000000000000001047 130.0
BYD1_k127_3805046_0 Cytochrome bd-type quinol oxidase, subunit 1 K00425 - 1.10.3.14 7.974e-306 941.0
BYD1_k127_3805046_1 transport system, permease and ATPase K02471 - - 3.751e-262 818.0
BYD1_k127_3805046_10 - - - - 0.0000000000000000000000000000000000000000000000009274 179.0
BYD1_k127_3805046_11 PFAM Dinitrogenase iron-molybdenum cofactor - - - 0.0000000000000000000000000000000009087 134.0
BYD1_k127_3805046_12 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000006416 136.0
BYD1_k127_3805046_13 Protein of unknown function (DUF423) - - - 0.00000000000000000000001102 106.0
BYD1_k127_3805046_14 LysR substrate binding domain K04761 - - 0.0000000000006277 76.0
BYD1_k127_3805046_2 Cytochrome c bacterial - - - 5.53e-213 675.0
BYD1_k127_3805046_3 membrane protein, TerC K05794 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009562 591.0
BYD1_k127_3805046_4 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 589.0
BYD1_k127_3805046_5 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009219 541.0
BYD1_k127_3805046_6 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 316.0
BYD1_k127_3805046_7 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002217 302.0
BYD1_k127_3805046_8 oxidase, subunit K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000006202 232.0
BYD1_k127_3805046_9 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001013 231.0
BYD1_k127_3860314_0 Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity K03782 - 1.11.1.21 0.0 1033.0
BYD1_k127_3860314_1 LysR substrate binding domain K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005802 371.0
BYD1_k127_3970188_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1477.0
BYD1_k127_3970188_1 CoA transferase having broad substrate specificity for short-chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons K01026 - 2.8.3.1 8.389e-261 813.0
BYD1_k127_3970188_10 Dihaem cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006254 262.0
BYD1_k127_3970188_11 chemotaxis, protein K03406 - - 0.000000000000000000000000000000000000000000000000000000000000005648 237.0
BYD1_k127_3970188_12 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.0000000000000000000000000000000000000000000000000000000003934 205.0
BYD1_k127_3970188_13 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000000000000000000000000000005337 223.0
BYD1_k127_3970188_14 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000000000000001525 165.0
BYD1_k127_3970188_15 Phasin protein - - - 0.00000000000000000000000000000000000001303 151.0
BYD1_k127_3970188_16 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.00000000000000000000000000004788 118.0
BYD1_k127_3970188_17 Propeptide PepSY amd peptidase M4 - - - 0.0000000000000000000000000003712 117.0
BYD1_k127_3970188_2 helicase K03722 - 3.6.4.12 1.38e-200 634.0
BYD1_k127_3970188_3 ferric reductase - - - 1.663e-197 623.0
BYD1_k127_3970188_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002811 501.0
BYD1_k127_3970188_5 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004687 514.0
BYD1_k127_3970188_6 Molybdenum cofactor synthesis K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006834 479.0
BYD1_k127_3970188_7 Protein of unknown function (DUF808) K09781 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 410.0
BYD1_k127_3970188_8 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 377.0
BYD1_k127_3970188_9 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002364 370.0
BYD1_k127_4181527_0 AcrB/AcrD/AcrF family K03296,K07788,K07789,K21133 - - 0.0 1451.0
BYD1_k127_4181527_1 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 0.0 1041.0
BYD1_k127_4181527_10 response to antibiotic - - - 0.00000000000000000000000000000000000000000000000000000001501 212.0
BYD1_k127_4181527_11 Belongs to the frataxin K06202 - - 0.00000000000000000000000000000000000000007501 153.0
BYD1_k127_4181527_2 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 8.685e-224 700.0
BYD1_k127_4181527_3 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 559.0
BYD1_k127_4181527_4 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003754 477.0
BYD1_k127_4181527_5 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 498.0
BYD1_k127_4181527_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 412.0
BYD1_k127_4181527_7 Periplasmic solute binding protein K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002548 378.0
BYD1_k127_4181527_8 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 312.0
BYD1_k127_4181527_9 ABC-3 protein K02075 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004343 267.0
BYD1_k127_4215358_0 AcyL-CoA dehydrogenase K06445 - - 0.0 1086.0
BYD1_k127_4218899_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1317.0
BYD1_k127_4218899_1 MOFRL family K11529 - 2.7.1.165 1.766e-198 625.0
BYD1_k127_4218899_10 Domain of unknown function (DUF3391) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001585 361.0
BYD1_k127_4218899_11 DNA polymerase involved in DNA repair K14161 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 360.0
BYD1_k127_4218899_12 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 377.0
BYD1_k127_4218899_13 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 344.0
BYD1_k127_4218899_14 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002972 298.0
BYD1_k127_4218899_15 branched-chain amino acid permease (azaleucine resistance) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007668 299.0
BYD1_k127_4218899_16 Diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003507 291.0
BYD1_k127_4218899_17 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K14160 - - 0.000000000000000000000000000000000000000000000000000000000000002218 226.0
BYD1_k127_4218899_18 - - - - 0.000000000000000000000000000000000000000000006187 166.0
BYD1_k127_4218899_19 Copper resistance protein D - - - 0.00000000000000000000000000000000000001235 149.0
BYD1_k127_4218899_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 595.0
BYD1_k127_4218899_20 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000371 137.0
BYD1_k127_4218899_21 - - - - 0.0000000000000000000000000000000006751 135.0
BYD1_k127_4218899_22 Branched-chain amino acid transport protein (AzlD) - - - 0.0000000000000000000000000000005592 134.0
BYD1_k127_4218899_23 - - - - 0.0000000000000000000003219 102.0
BYD1_k127_4218899_3 Phosphate transporter family K03306 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001153 540.0
BYD1_k127_4218899_4 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000444 460.0
BYD1_k127_4218899_5 C-terminal, D2-small domain, of ClpB protein K03544 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002212 453.0
BYD1_k127_4218899_6 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004228 454.0
BYD1_k127_4218899_7 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003396 442.0
BYD1_k127_4218899_8 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004689 433.0
BYD1_k127_4218899_9 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005368 377.0
BYD1_k127_4266543_0 COGs COG1653 ABC-type sugar transport system periplasmic component K02027 - - 4.864e-230 722.0
BYD1_k127_4266543_1 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 463.0
BYD1_k127_4266543_2 Mycolic acid cyclopropane synthetase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001871 388.0
BYD1_k127_4266543_3 permeases of the drug metabolite transporter (Dmt) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006843 390.0
BYD1_k127_4266543_4 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 322.0
BYD1_k127_4266543_5 PspC domain - - - 0.000000000000000000000000000000000008713 138.0
BYD1_k127_4266543_6 Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b) K07337 - - 0.00000000000000001227 93.0
BYD1_k127_4266543_7 Protein of unknown function (DUF1211) - - - 0.00000000002266 64.0
BYD1_k127_4266543_8 - - - - 0.000000002796 65.0
BYD1_k127_4289067_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1210.0
BYD1_k127_4289067_1 argininosuccinate lyase K01755 - 4.3.2.1 4.877e-239 744.0
BYD1_k127_4289067_10 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000003648 128.0
BYD1_k127_4289067_11 Thioredoxin-like domain - - - 0.000000000000000000000000005579 116.0
BYD1_k127_4289067_12 Ankyrin repeats (many copies) K10799 - 2.4.2.30 0.0000001217 57.0
BYD1_k127_4289067_2 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004914 587.0
BYD1_k127_4289067_3 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 510.0
BYD1_k127_4289067_4 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006467 469.0
BYD1_k127_4289067_5 enzyme of heme biosynthesis K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 334.0
BYD1_k127_4289067_6 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004387 320.0
BYD1_k127_4289067_7 PFAM histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009896 306.0
BYD1_k127_4289067_8 uroporphyrinogen III synthase K01719 - 4.2.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006129 290.0
BYD1_k127_4289067_9 LytTr DNA-binding domain K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003 286.0
BYD1_k127_4377575_0 NADH:flavin oxidoreductase / NADH oxidase family K00219 - 1.3.1.34 6.93e-310 960.0
BYD1_k127_4377575_1 Sodium/hydrogen exchanger family - - - 5.569e-202 637.0
BYD1_k127_4377575_10 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 302.0
BYD1_k127_4377575_11 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 303.0
BYD1_k127_4377575_12 MarC family integral membrane protein K05595 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001565 273.0
BYD1_k127_4377575_13 RNA pseudouridylate synthase K06177 - 5.4.99.28,5.4.99.29 0.000000000000000000000000000000000000000000000000000000000000000000000000008409 258.0
BYD1_k127_4377575_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001954 257.0
BYD1_k127_4377575_15 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07688,K07690 - - 0.000000000000000000000000000000000000000000000000000000000000000000001278 242.0
BYD1_k127_4377575_16 Predicted membrane protein (DUF2306) - - - 0.0000000000000000000000000000000000000000000000000000000000000000001664 237.0
BYD1_k127_4377575_17 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000004578 196.0
BYD1_k127_4377575_18 - - - - 0.000000000000000000000000000000000000000000001088 179.0
BYD1_k127_4377575_2 Histidine kinase - - - 1.291e-201 646.0
BYD1_k127_4377575_20 PFAM alpha beta hydrolase fold K00433 - 1.11.1.10 0.000000000000000000000000000001569 120.0
BYD1_k127_4377575_21 MerR HTH family regulatory protein K18997 - - 0.0000000000000000000000000001797 123.0
BYD1_k127_4377575_22 - - - - 0.000000001949 69.0
BYD1_k127_4377575_23 Periplasmic or secreted lipoprotein K04065 - - 0.000003133 55.0
BYD1_k127_4377575_3 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 565.0
BYD1_k127_4377575_4 PFAM Alcohol dehydrogenase zinc-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009935 459.0
BYD1_k127_4377575_5 DnaJ molecular chaperone homology domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 457.0
BYD1_k127_4377575_6 crp fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006959 394.0
BYD1_k127_4377575_7 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 326.0
BYD1_k127_4377575_8 cell septum assembly - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003804 309.0
BYD1_k127_4377575_9 NADPH-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003699 299.0
BYD1_k127_4445105_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 4.046e-295 914.0
BYD1_k127_4445105_1 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 1.514e-234 732.0
BYD1_k127_4445105_2 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 309.0
BYD1_k127_4445105_3 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001313 296.0
BYD1_k127_4445105_4 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001526 297.0
BYD1_k127_4445105_5 redox protein, regulator of disulfide bond formation K07397 - - 0.000000000000000000000000000000000000000000000000000000000000000000001799 237.0
BYD1_k127_4445105_6 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000008057 174.0
BYD1_k127_4445105_7 CNP1-like family - - - 0.0000000000000000000000000000000003047 145.0
BYD1_k127_4681325_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 3.532e-267 837.0
BYD1_k127_4681325_1 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 1.286e-239 765.0
BYD1_k127_4681325_10 Predicted membrane protein (DUF2157) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 439.0
BYD1_k127_4681325_11 B12 binding domain K22491 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 427.0
BYD1_k127_4681325_12 Cytochrome c554 and c-prime - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 428.0
BYD1_k127_4681325_13 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001203 398.0
BYD1_k127_4681325_14 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004484 402.0
BYD1_k127_4681325_15 AsmA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005017 423.0
BYD1_k127_4681325_16 abc transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 387.0
BYD1_k127_4681325_17 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004328 412.0
BYD1_k127_4681325_18 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 381.0
BYD1_k127_4681325_19 response regulator K07667 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006531 327.0
BYD1_k127_4681325_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 6.672e-230 719.0
BYD1_k127_4681325_20 COG0491 Zn-dependent hydrolases, including glyoxylases K01069 GO:0003674,GO:0003824,GO:0004416,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016787,GO:0016788,GO:0016790,GO:0019243,GO:0019752,GO:0032787,GO:0042180,GO:0042182,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0051596,GO:0061727,GO:0071704,GO:1901575,GO:1901615 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008853 323.0
BYD1_k127_4681325_21 His Kinase A (phosphoacceptor) domain K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 337.0
BYD1_k127_4681325_22 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000003252 254.0
BYD1_k127_4681325_23 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003512 256.0
BYD1_k127_4681325_24 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000009453 250.0
BYD1_k127_4681325_25 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001067 253.0
BYD1_k127_4681325_26 Large-conductance mechanosensitive channel, MscL - - - 0.00000000000000000000000000000000000000000000000000000000000002335 218.0
BYD1_k127_4681325_27 Cytochrome c, class I - - - 0.0000000000000000000000000000000000000000000000002337 185.0
BYD1_k127_4681325_28 Protein of unknown function (DUF1304) K08987 - - 0.00000000000000000000000000000000000000000000001999 173.0
BYD1_k127_4681325_29 Domain of unknown function (DUF4390) - - - 0.000000000000000000000000000000000000000000001548 171.0
BYD1_k127_4681325_3 COG0569 K transport systems, NAD-binding component K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008929 601.0
BYD1_k127_4681325_30 Domain of unknown function (DUF4824) - - - 0.0000000000000000000000000000000000000000002306 179.0
BYD1_k127_4681325_31 Dihaem cytochrome c - - - 0.0000000000000000000000005382 111.0
BYD1_k127_4681325_4 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 573.0
BYD1_k127_4681325_5 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004334 526.0
BYD1_k127_4681325_6 Histidine kinase K07646 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 510.0
BYD1_k127_4681325_7 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003144 518.0
BYD1_k127_4681325_8 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005671 476.0
BYD1_k127_4681325_9 Elongator protein 3, MiaB family, Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 451.0
BYD1_k127_4694088_0 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 537.0
BYD1_k127_4694088_1 - - - - 0.000000000000000000002928 98.0
BYD1_k127_4694088_2 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000003528 67.0
BYD1_k127_4694088_3 - - - - 0.00000003955 58.0
BYD1_k127_4771019_0 Sodium:solute symporter family K14393 - - 8.733e-315 977.0
BYD1_k127_4771019_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 4.678e-305 940.0
BYD1_k127_4771019_10 - - - - 0.000000000000000000000000000000009527 130.0
BYD1_k127_4771019_11 Domain of unknown function (DUF4212) - - - 0.0000000000000000000000000000003324 138.0
BYD1_k127_4771019_12 - - - - 0.0000000000036 75.0
BYD1_k127_4771019_13 - - - - 0.00000000003584 70.0
BYD1_k127_4771019_14 Protein of unknown function, DUF485 - - - 0.0000005201 52.0
BYD1_k127_4771019_2 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 2.512e-216 677.0
BYD1_k127_4771019_3 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 526.0
BYD1_k127_4771019_4 Alpha/beta hydrolase family K00627 - 2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 486.0
BYD1_k127_4771019_5 pathogenesis - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 356.0
BYD1_k127_4771019_6 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000168 285.0
BYD1_k127_4771019_7 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000008392 231.0
BYD1_k127_4771019_8 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000001577 217.0
BYD1_k127_4771019_9 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000000004448 176.0
BYD1_k127_4783481_0 Polyphosphate kinase 2 (PPK2) - - - 4.468e-258 801.0
BYD1_k127_4783481_1 Belongs to the acetyltransferase family. ArgA subfamily K14682 - 2.3.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 578.0
BYD1_k127_4783481_11 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.0000009853 51.0
BYD1_k127_4783481_2 Belongs to the RuBisCO large chain family K01601 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 440.0
BYD1_k127_4783481_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 335.0
BYD1_k127_4783481_4 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003186 327.0
BYD1_k127_4783481_5 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009404 308.0
BYD1_k127_4783481_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 292.0
BYD1_k127_4783481_7 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001798 282.0
BYD1_k127_4783481_8 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000005311 261.0
BYD1_k127_4783481_9 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.00000000000000000000000000000000000000000003827 161.0
BYD1_k127_4788885_0 Periplasmic binding protein K01999 - - 2.324e-256 795.0
BYD1_k127_4788885_1 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006108 535.0
BYD1_k127_4788885_2 ABC transporter K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 483.0
BYD1_k127_4788885_3 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000001326 72.0
BYD1_k127_4816033_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1037.0
BYD1_k127_4816033_1 Peptidase family M50 K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001703 547.0
BYD1_k127_4816033_10 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000000000000000000000000003812 232.0
BYD1_k127_4816033_11 Belongs to the skp family K06142 - - 0.000000000000000000000000000000000000000000000000000008914 194.0
BYD1_k127_4816033_12 transport system periplasmic component K01989 - - 0.00000000000000000000000000000000001621 147.0
BYD1_k127_4816033_2 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002533 502.0
BYD1_k127_4816033_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 442.0
BYD1_k127_4816033_4 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005432 417.0
BYD1_k127_4816033_5 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003118 378.0
BYD1_k127_4816033_6 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005947 364.0
BYD1_k127_4816033_7 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003237 370.0
BYD1_k127_4816033_8 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000000000000000000000005976 248.0
BYD1_k127_4816033_9 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000000000004205 257.0
BYD1_k127_4839943_0 Type II secretion system (T2SS), protein F K02455,K12278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008677 577.0
BYD1_k127_4839943_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454,K12276 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 293.0
BYD1_k127_4839943_2 Prokaryotic N-terminal methylation motif K10924 - - 0.00000000000000000000000009494 124.0
BYD1_k127_4911650_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1309.0
BYD1_k127_4911650_1 exporter - - - 4.032e-234 754.0
BYD1_k127_4911650_10 Glycosyltransferase like family 2 K00786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000133 401.0
BYD1_k127_4911650_11 MltA-interacting protein MipA - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005019 376.0
BYD1_k127_4911650_12 NAD dependent epimerase/dehydratase family K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 361.0
BYD1_k127_4911650_13 pteridine-dependent deoxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 363.0
BYD1_k127_4911650_14 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006873 353.0
BYD1_k127_4911650_15 Phosphate acyltransferases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003822 342.0
BYD1_k127_4911650_16 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 341.0
BYD1_k127_4911650_17 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 336.0
BYD1_k127_4911650_18 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 313.0
BYD1_k127_4911650_19 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000962 258.0
BYD1_k127_4911650_2 Sodium/hydrogen exchanger family - - - 3.222e-213 673.0
BYD1_k127_4911650_20 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) - - - 0.0000000000000000000000000000000000000000000000000000000001492 218.0
BYD1_k127_4911650_21 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000004192 198.0
BYD1_k127_4911650_22 dehydratase - - - 0.000000000000000000000000000000000000000000000000292 192.0
BYD1_k127_4911650_23 PFAM Plasmid maintenance system killer K07334 - - 0.00000000000000000000000000000000000222 139.0
BYD1_k127_4911650_24 Helix-turn-helix XRE-family like proteins K21498 - - 0.000000000000000000000000000000000004978 138.0
BYD1_k127_4911650_25 membrane - - - 0.00000000000000000000000000000000093 138.0
BYD1_k127_4911650_26 Phosphopantetheine attachment site K02078 - - 0.00000000000000000000000000001254 120.0
BYD1_k127_4911650_27 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000000000001258 117.0
BYD1_k127_4911650_28 Tryptophan halogenase - - - 0.000000000000000000000002427 103.0
BYD1_k127_4911650_29 AMP-binding enzyme - - - 0.00000000000000003564 89.0
BYD1_k127_4911650_3 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008852 568.0
BYD1_k127_4911650_30 Phosphopantetheine attachment site K02078 - - 0.00000000000000209 78.0
BYD1_k127_4911650_31 - - - - 0.00000000006736 65.0
BYD1_k127_4911650_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458,K14660,K14667 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003251 555.0
BYD1_k127_4911650_5 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003158 491.0
BYD1_k127_4911650_6 AMP-binding enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 486.0
BYD1_k127_4911650_7 Protein of unknown function (DUF1615) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006422 477.0
BYD1_k127_4911650_8 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006167 441.0
BYD1_k127_4911650_9 depolymerase K05973 - 3.1.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 421.0
BYD1_k127_4918411_0 Dynamin family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007339 634.0
BYD1_k127_4918411_1 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003161 590.0
BYD1_k127_4918411_10 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008479 443.0
BYD1_k127_4918411_11 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000192 434.0
BYD1_k127_4918411_12 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006541 421.0
BYD1_k127_4918411_13 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 406.0
BYD1_k127_4918411_14 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006513 379.0
BYD1_k127_4918411_15 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003149 374.0
BYD1_k127_4918411_16 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002566 320.0
BYD1_k127_4918411_17 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 336.0
BYD1_k127_4918411_18 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 297.0
BYD1_k127_4918411_19 Thioesterase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000824 267.0
BYD1_k127_4918411_2 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006812 597.0
BYD1_k127_4918411_20 HDOD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003821 286.0
BYD1_k127_4918411_21 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004147 252.0
BYD1_k127_4918411_22 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000002213 184.0
BYD1_k127_4918411_23 Thioredoxin - - - 0.000000000000000000000000000000000000000000000002091 175.0
BYD1_k127_4918411_24 Repeats in polycystic kidney disease 1 (PKD1) and other proteins - - - 0.0000000000000000000159 104.0
BYD1_k127_4918411_25 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.0000000000000000001142 97.0
BYD1_k127_4918411_26 Ferredoxin - - - 0.0000000000000000004883 86.0
BYD1_k127_4918411_27 Protein of unknown function (DUF1566) - - - 0.0000000000000001049 92.0
BYD1_k127_4918411_3 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 530.0
BYD1_k127_4918411_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003638 516.0
BYD1_k127_4918411_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003448 520.0
BYD1_k127_4918411_6 alginic acid biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009425 462.0
BYD1_k127_4918411_7 alginic acid biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 450.0
BYD1_k127_4918411_8 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004079 452.0
BYD1_k127_4918411_9 SMART Integrin alpha beta-propellor repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 454.0
BYD1_k127_4930675_0 cofactor biosynthesis protein NifB K02585 - - 2.811e-204 642.0
BYD1_k127_4930675_1 Metallo-beta-lactamase superfamily K22405 - 1.6.3.4 5.5e-201 634.0
BYD1_k127_4930675_11 addiction module killer protein - - - 0.0000000000000000000000000000000000000000000000000000001286 195.0
BYD1_k127_4930675_12 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000005504 185.0
BYD1_k127_4930675_13 Ferredoxin - - - 0.000000000000000000000000000000000000000000000000001117 185.0
BYD1_k127_4930675_14 addiction module antidote protein - - - 0.0000000000000000000000000000000000000000000003027 174.0
BYD1_k127_4930675_15 - - - - 0.00000000000000000000000000000000000000000001382 172.0
BYD1_k127_4930675_16 Belongs to the ArsC family - - - 0.000000000000000000000000000000000000000001082 161.0
BYD1_k127_4930675_17 4Fe-4S ferredoxin iron-sulfur binding domain - - - 0.000000000000000000000000000000000000000004305 161.0
BYD1_k127_4930675_18 PFAM Hemerythrin HHE cation binding domain protein - - - 0.00000000000000000000000000000000002762 149.0
BYD1_k127_4930675_19 - - - - 0.00000000000000000000265 97.0
BYD1_k127_4930675_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006814 482.0
BYD1_k127_4930675_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004506 492.0
BYD1_k127_4930675_4 Bacterial extracellular solute-binding protein K02055 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001741 432.0
BYD1_k127_4930675_5 ADP-ribosyl- dinitrogen reductase hydrolase K05521 - 3.2.2.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003868 405.0
BYD1_k127_4930675_6 Dinitrogenase reductase ADP-ribosyltransferase (DRAT) K05951 - 2.4.2.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 390.0
BYD1_k127_4930675_7 SIR2-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003353 381.0
BYD1_k127_4930675_8 alginic acid biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 394.0
BYD1_k127_4930675_9 Peptidase S8 K01342,K08651 - 3.4.21.62,3.4.21.66 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 327.0
BYD1_k127_4931877_0 Belongs to the methyltransferase superfamily K07444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002967 477.0
BYD1_k127_4931877_1 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004547 342.0
BYD1_k127_4931877_2 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006059 331.0
BYD1_k127_4931877_3 membrane K08973 - - 0.00000000000000000000000000000000000000000000000000000000000562 212.0
BYD1_k127_5065247_0 pyruvate phosphate dikinase K01006,K01007 - 2.7.9.1,2.7.9.2 0.0 1555.0
BYD1_k127_5065247_1 GMP synthase C terminal domain K01951 - 6.3.5.2 5.718e-303 933.0
BYD1_k127_5065247_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009497 421.0
BYD1_k127_5065247_3 ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007822 327.0
BYD1_k127_5065247_4 Belongs to the GcvT family K06980 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000146 278.0
BYD1_k127_5065247_5 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002786 273.0
BYD1_k127_5065247_6 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.0000000000000000000000000000000000000000000000000000000000000000000000004624 249.0
BYD1_k127_5065247_7 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000001445 215.0
BYD1_k127_5065247_8 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.00000000000000000001834 90.0
BYD1_k127_5081729_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.0 1286.0
BYD1_k127_5081729_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 437.0
BYD1_k127_5081729_2 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.000000000000000000000000000000000000000000000000000000000000000000002378 237.0
BYD1_k127_5081729_3 Oligoketide cyclase lipid transport protein - - - 0.00000000000000000000000000000000000000000000000000000000000000008155 224.0
BYD1_k127_5081729_4 NfeD-like C-terminal, partner-binding K07340 - - 0.0000000000000000000000000000000000000000000004026 178.0
BYD1_k127_5081729_5 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000000000000000000001907 146.0
BYD1_k127_5081729_6 Domain of unknown function (DUF4124) - - - 0.00000000001125 73.0
BYD1_k127_5081729_7 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 0.0000000000657 63.0
BYD1_k127_5182251_0 Subunit R is required for both nuclease and ATPase activities, but not for modification K01153 - 3.1.21.3 0.0 1627.0
BYD1_k127_5182251_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1097.0
BYD1_k127_5182251_10 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006216 338.0
BYD1_k127_5182251_11 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001797 329.0
BYD1_k127_5182251_12 membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 312.0
BYD1_k127_5182251_13 PpiC-type peptidyl-prolyl cis-trans isomerase K01802,K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003579 284.0
BYD1_k127_5182251_14 Type I restriction modification DNA specificity domain K01154 - 3.1.21.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007175 285.0
BYD1_k127_5182251_15 synthase K01737 - 4.1.2.50,4.2.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000154 247.0
BYD1_k127_5182251_16 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000004057 251.0
BYD1_k127_5182251_17 NifZ domain K02597 - - 0.000000000000000000000000000000000000000000000000000000000008041 215.0
BYD1_k127_5182251_18 - - - - 0.000000000000000000000000000000000000000000000002407 184.0
BYD1_k127_5182251_19 Transcriptional regulator - - - 0.00000000000000000000000000000000000000183 148.0
BYD1_k127_5182251_2 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1081.0
BYD1_k127_5182251_20 Abortive infection C-terminus - - - 0.00000000000000000000000000000000001373 144.0
BYD1_k127_5182251_21 Protein of unknown function (DUF3301) - - - 0.000000000000000000000000006383 113.0
BYD1_k127_5182251_22 PFAM Haemerythrin HHE cation-binding motif K07216 - - 0.00000000000000000000000001269 124.0
BYD1_k127_5182251_24 - - - - 0.00000000000000000000001045 108.0
BYD1_k127_5182251_25 May protect the nitrogenase Fe-Mo protein from oxidative damage K02595 - - 0.00000000000000000000001827 104.0
BYD1_k127_5182251_27 Ribbon-helix-helix protein, copG family - - - 0.00000000000000005934 85.0
BYD1_k127_5182251_28 Helix-turn-helix domain - - - 0.0000000000000002271 83.0
BYD1_k127_5182251_29 - - - - 0.0000000000000007041 80.0
BYD1_k127_5182251_3 PFAM N-6 DNA methylase K03427 - 2.1.1.72 5e-324 996.0
BYD1_k127_5182251_30 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 GO:0003674,GO:0003824,GO:0004844,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006285,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016798,GO:0016799,GO:0019104,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097506,GO:0097510,GO:0140097,GO:1901360 3.2.2.27 0.00000000002641 74.0
BYD1_k127_5182251_33 - - - - 0.00007176 54.0
BYD1_k127_5182251_35 Transcriptional regulator K07733 - - 0.0005953 46.0
BYD1_k127_5182251_4 Belongs to the aspartokinase family K00928 - 2.7.2.4 2.059e-214 672.0
BYD1_k127_5182251_5 Diguanylate cyclase - - - 1.481e-196 637.0
BYD1_k127_5182251_6 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 619.0
BYD1_k127_5182251_7 Belongs to the alpha-IPM synthase homocitrate synthase family K02594 - 2.3.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009914 525.0
BYD1_k127_5182251_8 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005678 523.0
BYD1_k127_5182251_9 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 411.0
BYD1_k127_5397513_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB - - - 0.0 1117.0
BYD1_k127_5397513_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005178 534.0
BYD1_k127_5397513_2 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 348.0
BYD1_k127_5397513_3 Ornithine cyclodeaminase/mu-crystallin family K01750 - 4.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 358.0
BYD1_k127_5397513_4 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 304.0
BYD1_k127_5397513_5 (FHA) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000118 284.0
BYD1_k127_552390_0 TOBE domain K02017 - 3.6.3.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006275 487.0
BYD1_k127_552390_1 TOBE domain K02019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 392.0
BYD1_k127_552390_10 NifZ domain K02597 - - 0.00000000000000000000003957 107.0
BYD1_k127_552390_2 molybdenum ABC transporter, periplasmic K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 362.0
BYD1_k127_552390_3 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 356.0
BYD1_k127_552390_4 TIGRFAM molybdenum ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006579 316.0
BYD1_k127_552390_5 transcriptional regulator K21405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 297.0
BYD1_k127_552390_6 NifQ K15790 - - 0.00000000000000000000000000000000000000000000000000000000000002601 222.0
BYD1_k127_552390_7 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000001964 196.0
BYD1_k127_552390_8 - - - - 0.0000000000000000000000000000000001498 141.0
BYD1_k127_552390_9 Transcriptional regulator - - - 0.000000000000000000000002178 109.0
BYD1_k127_5556441_0 Nickel-dependent hydrogenase K06281 - 1.12.99.6 8.593e-308 947.0
BYD1_k127_5556441_1 Sigma-54 interaction domain K19641 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004318 418.0
BYD1_k127_5556441_2 Hydrogenase maturation protease K03605 - - 0.00000000000000000000000000000000000000000000004403 176.0
BYD1_k127_5556441_3 [NiFe]-hydrogenase assembly, chaperone, HybE - - - 0.00000000000000000000000000000000005075 139.0
BYD1_k127_5556441_4 HupF/HypC family K04653 - - 0.00000000000000000001579 95.0
BYD1_k127_5629123_0 Pfam Glycosyl transferase family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 412.0
BYD1_k127_5629123_1 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002439 397.0
BYD1_k127_5629123_2 Nad-dependent epimerase dehydratase - - - 0.0000000000000000000000000000000000000000000000006397 175.0
BYD1_k127_567554_0 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 4.667e-239 745.0
BYD1_k127_567554_1 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 2.285e-230 719.0
BYD1_k127_567554_10 Glutathione S-transferase K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000009751 271.0
BYD1_k127_567554_11 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000007756 234.0
BYD1_k127_567554_12 cytochrome - - - 0.000000000000000000000000000000000000000000000000000000006556 203.0
BYD1_k127_567554_13 - - - - 0.00000000000000000000000000000000000000000000000008777 179.0
BYD1_k127_567554_14 Anaerobic sulfatase maturase K06871 - - 0.00000000000000000000000000000000000000000001206 177.0
BYD1_k127_567554_15 SnoaL-like domain - - - 0.0000000000000000000000000000000000000000001578 163.0
BYD1_k127_567554_16 protein conserved in bacteria - - - 0.000000000000000000000000000000000000005886 156.0
BYD1_k127_567554_17 - - - - 0.0000000000000000000000006401 113.0
BYD1_k127_567554_18 Zinc-finger domain - - - 0.00000000000000000000005465 113.0
BYD1_k127_567554_2 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 5.681e-207 649.0
BYD1_k127_567554_3 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 585.0
BYD1_k127_567554_4 Alpha amylase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 597.0
BYD1_k127_567554_5 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 535.0
BYD1_k127_567554_6 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004864 463.0
BYD1_k127_567554_7 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 432.0
BYD1_k127_567554_8 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 377.0
BYD1_k127_567554_9 SMART chemotaxis sensory transducer - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 334.0
BYD1_k127_5751113_0 PFAM von Willebrand factor type A K02448 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 520.0
BYD1_k127_5751113_1 Cysteine-rich domain K03389 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002877 464.0
BYD1_k127_5751113_10 FAD binding domain K00394 - 1.8.99.2 0.0000000000000000001786 87.0
BYD1_k127_5751113_11 4Fe-4S dicluster domain K16887 - - 0.000000000000001984 76.0
BYD1_k127_5751113_2 CbbQ/NirQ/NorQ C-terminal K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001734 369.0
BYD1_k127_5751113_3 Putative zinc- or iron-chelating domain K06940 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003142 353.0
BYD1_k127_5751113_4 PFAM metal-dependent phosphohydrolase, HD sub domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 355.0
BYD1_k127_5751113_5 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007872 247.0
BYD1_k127_5751113_6 response regulator receiver K13041 - - 0.000000000000000000000000000000000000000000000000001559 189.0
BYD1_k127_5751113_7 - - - - 0.00000000000000000000000000000000000000000003591 164.0
BYD1_k127_5751113_8 sulphate transporter K03321 - - 0.00000000000000000000000000000000000008878 160.0
BYD1_k127_5775665_0 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 1.77e-291 911.0
BYD1_k127_5775665_1 ABC transporter transmembrane region K06147 - - 1.979e-272 849.0
BYD1_k127_5775665_2 ATP-grasp domain K03802 - 6.3.2.29,6.3.2.30 7.463e-231 726.0
BYD1_k127_5899170_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1123.0
BYD1_k127_5899170_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 4.3e-254 790.0
BYD1_k127_5899170_10 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004329 276.0
BYD1_k127_5899170_11 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000372 206.0
BYD1_k127_5899170_12 Required for maturation of 30S ribosomal subunits K09748 - - 0.000000000000000000000000000000000000000000000000000000001648 205.0
BYD1_k127_5899170_13 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000003917 166.0
BYD1_k127_5899170_14 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.0000000000000000000000000000000000000000001817 161.0
BYD1_k127_5899170_2 Participates in both transcription termination and antitermination K02600 - - 1.9e-244 762.0
BYD1_k127_5899170_3 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 4.218e-220 686.0
BYD1_k127_5899170_4 SMART phosphoesterase PHP domain protein K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003358 359.0
BYD1_k127_5899170_5 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002148 355.0
BYD1_k127_5899170_6 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 349.0
BYD1_k127_5899170_7 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004615 336.0
BYD1_k127_5899170_8 Peptidase M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009004 329.0
BYD1_k127_5899170_9 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 306.0
BYD1_k127_5909423_0 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 6.592e-218 678.0
BYD1_k127_5909423_1 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008352 322.0
BYD1_k127_5909423_2 TIGRFAM sulfur relay protein TusD DsrE K07235 GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0019417,GO:0044237,GO:0055114 - 0.000000000000000000000000000000000000000000000000000000000000000000005715 235.0
BYD1_k127_5909423_3 Belongs to the DsrF TusC family K07236 - - 0.0000000000000000000000000000000000000000000000000001694 188.0
BYD1_k127_5909423_4 DsrC like protein K11179 - - 0.00000000000000000000000000000000000309 138.0
BYD1_k127_5909423_5 DsrH like protein K07237 - - 0.00000000000000000000000000000001432 129.0
BYD1_k127_5914007_0 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001603 353.0
BYD1_k127_5914007_1 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006313 287.0
BYD1_k127_5914007_2 HNH nucleases - - - 0.0000000000000000000000000003684 117.0
BYD1_k127_5981213_0 of ABC transporters with duplicated ATPase - - - 7.528e-294 910.0
BYD1_k127_5981213_1 His Kinase A (phosphoacceptor) domain - - - 2.175e-248 802.0
BYD1_k127_5981213_10 Iron-containing alcohol dehydrogenase K00001 - 1.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 503.0
BYD1_k127_5981213_11 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 518.0
BYD1_k127_5981213_12 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 438.0
BYD1_k127_5981213_13 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004317 436.0
BYD1_k127_5981213_14 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006551 444.0
BYD1_k127_5981213_15 FIST_C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 351.0
BYD1_k127_5981213_16 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000469 339.0
BYD1_k127_5981213_17 transmembrane transcriptional regulator (Anti-sigma factor) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002103 318.0
BYD1_k127_5981213_18 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000019 310.0
BYD1_k127_5981213_19 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002344 276.0
BYD1_k127_5981213_2 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 5.808e-218 689.0
BYD1_k127_5981213_20 Chromate resistance - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006021 265.0
BYD1_k127_5981213_22 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000002984 232.0
BYD1_k127_5981213_23 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000000000000000000000000000001027 238.0
BYD1_k127_5981213_24 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000000000000001777 232.0
BYD1_k127_5981213_25 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000047 206.0
BYD1_k127_5981213_26 Secreted repeat of unknown function - - - 0.0000000000000000000000000000000000000000000000000000000005796 203.0
BYD1_k127_5981213_27 alpha/beta hydrolase fold K01253 - 3.3.2.9 0.000000000000000000000000000000000000000000000000000003654 214.0
BYD1_k127_5981213_28 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.00000000000000000000000000000000000000000000000000002684 190.0
BYD1_k127_5981213_29 Amino acid permease K03294 - - 0.00000000000000000000000000000000000000000000000000005366 203.0
BYD1_k127_5981213_3 Chromate transporter K07240 - - 8.829e-216 676.0
BYD1_k127_5981213_30 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000001858 209.0
BYD1_k127_5981213_31 Phosphate acyltransferases - - - 0.000000000000000000000000000000000000000000000000002428 207.0
BYD1_k127_5981213_32 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000000000000000000000000005027 184.0
BYD1_k127_5981213_33 Uncharacterized ACR, COG1993 - - - 0.00000000000000000000000000000000000000000000006296 170.0
BYD1_k127_5981213_34 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000000000000000000003603 168.0
BYD1_k127_5981213_35 - - - - 0.0000000000000000000000000000000000000001391 155.0
BYD1_k127_5981213_36 PFAM PEGA domain protein - - - 0.0000000000000000000000000000000000004056 152.0
BYD1_k127_5981213_37 - - - - 0.0000000000000000000000000000002327 128.0
BYD1_k127_5981213_38 - - - - 0.000000000000000000000000000239 125.0
BYD1_k127_5981213_39 2Fe-2S iron-sulfur cluster binding domain K00523 - 1.17.1.1 0.00000000000000000000000001561 112.0
BYD1_k127_5981213_4 Transporter associated domain K03699 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004559 594.0
BYD1_k127_5981213_40 - - - - 0.00000000000000000000000009534 124.0
BYD1_k127_5981213_41 Protein of unknown function (DUF2789) - - - 0.00000000000000000002011 100.0
BYD1_k127_5981213_42 Thioredoxin-like - - - 0.00000000000000000006474 93.0
BYD1_k127_5981213_43 DsrE/DsrF-like family K06039 - - 0.00000000004511 64.0
BYD1_k127_5981213_5 Ethylbenzene dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006794 583.0
BYD1_k127_5981213_6 Metal dependent phosphohydrolases with conserved 'HD' motif. K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007056 542.0
BYD1_k127_5981213_7 Major Facilitator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005016 537.0
BYD1_k127_5981213_8 PFAM ATP-binding region ATPase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009892 539.0
BYD1_k127_5981213_9 Cation efflux family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 506.0
BYD1_k127_6006299_0 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 414.0
BYD1_k127_6006299_1 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000761 390.0
BYD1_k127_6006299_2 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000001639 235.0
BYD1_k127_6006299_3 Domain of unknown function (DUF1854) - - - 0.0000000000000000000000000000000000000000000000000000000000000003832 224.0
BYD1_k127_6006299_4 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.00000000000000000000000000000000000000000000000000000000000008375 214.0
BYD1_k127_6006299_5 Uncharacterized ACR, COG1430 K09005 - - 0.0000000000000000000000000000000000000000000000000000009918 196.0
BYD1_k127_6021759_0 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.675e-216 693.0
BYD1_k127_6021759_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002165 492.0
BYD1_k127_6021759_2 regulation of response to stimulus K01179,K05970 - 3.1.1.53,3.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001999 349.0
BYD1_k127_6021759_3 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006488 326.0
BYD1_k127_6021759_4 Domain of unknown function (DUF1841) - - - 0.0000000000000000000000000000000000000000000000000004814 187.0
BYD1_k127_6021759_5 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000887 73.0
BYD1_k127_6046727_0 Nickel-dependent hydrogenase K06281 - 1.12.99.6 4.44e-318 979.0
BYD1_k127_6046727_1 Polysulphide reductase, NrfD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 589.0
BYD1_k127_6046727_2 formate dehydrogenase K00124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 426.0
BYD1_k127_6046727_3 Sigma-54 interaction domain K19641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003841 424.0
BYD1_k127_6046727_4 Hydrogenase maturation protease K03605 - - 0.000000000000000000000000000000000000000000000006729 180.0
BYD1_k127_6046727_5 [NiFe]-hydrogenase assembly, chaperone, HybE - - - 0.000000000000000000000000000000009094 134.0
BYD1_k127_6046727_6 HupF/HypC family K04653 - - 0.00000000000000005517 88.0
BYD1_k127_6061975_0 Cation transporter/ATPase, N-terminus K01539 - 3.6.3.9 0.0 1245.0
BYD1_k127_6061975_1 Bacterial protein of unknown function (DUF853) K06915 - - 2.712e-236 739.0
BYD1_k127_6061975_10 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 402.0
BYD1_k127_6061975_11 Belongs to the GSP D family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001855 385.0
BYD1_k127_6061975_12 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 376.0
BYD1_k127_6061975_13 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 366.0
BYD1_k127_6061975_14 MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008751 355.0
BYD1_k127_6061975_15 occludens toxin K10954 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009173 307.0
BYD1_k127_6061975_16 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 301.0
BYD1_k127_6061975_17 Cyclic nucleotide-monophosphate binding domain K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002945 289.0
BYD1_k127_6061975_18 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000153 293.0
BYD1_k127_6061975_19 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004137 281.0
BYD1_k127_6061975_2 DNA methylase K00590 - 2.1.1.113 3.665e-229 741.0
BYD1_k127_6061975_20 PAS fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003719 254.0
BYD1_k127_6061975_21 Cache domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001864 261.0
BYD1_k127_6061975_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002992 246.0
BYD1_k127_6061975_23 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.0000000000000000000000000000000000000000000000000000000000000002434 228.0
BYD1_k127_6061975_24 Belongs to the ompA family K03640 - - 0.00000000000000000000000000000000000000000000000000006194 193.0
BYD1_k127_6061975_25 Domain of unknown function (DUF4442) - - - 0.00000000000000000000000000000000000000000000000002668 184.0
BYD1_k127_6061975_26 TonB C terminal K03646 - - 0.000000000000000000000000000000000000000001015 166.0
BYD1_k127_6061975_27 Biopolymer transport protein ExbD/TolR K03560 - - 0.000000000000000000000000000000000000000002079 165.0
BYD1_k127_6061975_28 thioesterase K07107 - - 0.00000000000000000000000000000000000001397 150.0
BYD1_k127_6061975_29 - - - - 0.00000000000000000000000000000000002947 137.0
BYD1_k127_6061975_3 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002143 605.0
BYD1_k127_6061975_30 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000002932 135.0
BYD1_k127_6061975_31 Protein of unknown function (DUF2523) - - - 0.00000000000000000000000000001725 120.0
BYD1_k127_6061975_32 PLD-like domain - - - 0.000000000000000000001743 108.0
BYD1_k127_6061975_33 sequence-specific DNA binding - - - 0.000000007863 62.0
BYD1_k127_6061975_34 - - - - 0.000001098 57.0
BYD1_k127_6061975_35 - - - - 0.000002271 54.0
BYD1_k127_6061975_4 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 571.0
BYD1_k127_6061975_5 amino acid K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009385 561.0
BYD1_k127_6061975_6 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 422.0
BYD1_k127_6061975_7 transcriptional regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 426.0
BYD1_k127_6061975_8 Phage X family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 415.0
BYD1_k127_6061975_9 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 398.0
BYD1_k127_6119975_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1553.0
BYD1_k127_6119975_1 Putative diguanylate phosphodiesterase - - - 8.23e-205 668.0
BYD1_k127_6119975_2 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 523.0
BYD1_k127_6119975_3 Histidine kinase K20975 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003426 452.0
BYD1_k127_6119975_4 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 387.0
BYD1_k127_6119975_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006584 335.0
BYD1_k127_6119975_6 Domain of unknown function (DUF4202) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 310.0
BYD1_k127_6119975_7 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000003097 116.0
BYD1_k127_6119975_8 - - - - 0.000000000000000000000004378 115.0
BYD1_k127_6119975_9 cobalamin (vitamin B12) biosynthesis CbiX protein K03795 - 4.99.1.3 0.000000000000000000001168 97.0
BYD1_k127_6122422_0 PFAM Streptococcal 67 kDa myosin-cross-reactive antigen like family K10254 - 4.2.1.53 1.674e-269 838.0
BYD1_k127_6122422_1 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 8.771e-238 751.0
BYD1_k127_6122422_10 Transcriptional regulator K13643 GO:0003674,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0140110,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000002664 118.0
BYD1_k127_6122422_11 - - - - 0.000000000000000001176 92.0
BYD1_k127_6122422_12 - - - - 0.00000000003861 64.0
BYD1_k127_6122422_13 Protein of unknown function (DUF3567) - - - 0.0000000001254 65.0
BYD1_k127_6122422_14 - - - - 0.0003183 51.0
BYD1_k127_6122422_2 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616,K13810 - 2.2.1.2,5.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000764 539.0
BYD1_k127_6122422_3 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002812 424.0
BYD1_k127_6122422_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009915 339.0
BYD1_k127_6122422_5 carboxylic ester hydrolase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000644 332.0
BYD1_k127_6122422_6 protein, hemolysin III K11068 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006689 297.0
BYD1_k127_6122422_7 Alternative oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001017 282.0
BYD1_k127_6122422_8 LTXXQ motif family protein - - - 0.00000000000000000000000000000000000000000002417 168.0
BYD1_k127_6122422_9 - - - - 0.0000000000000000000000000002946 116.0
BYD1_k127_6134406_0 aminopeptidase N K01256 - 3.4.11.2 0.0 1148.0
BYD1_k127_6134406_1 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 2.611e-206 662.0
BYD1_k127_6134406_10 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 325.0
BYD1_k127_6134406_11 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003078 278.0
BYD1_k127_6134406_12 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001393 282.0
BYD1_k127_6134406_13 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.00000000000000000000000000000000000000000000000000000000000000000000000508 253.0
BYD1_k127_6134406_14 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000005071 231.0
BYD1_k127_6134406_15 methyltransferase K08316 - 2.1.1.171 0.000000000000000000000000000000000000000000000000000000005078 216.0
BYD1_k127_6134406_16 amino acid activation for nonribosomal peptide biosynthetic process - - - 0.000000000000000000000000000000000000000000000000000002669 197.0
BYD1_k127_6134406_17 Biopolymer transport protein K03559 - - 0.00000000000000000000000000000000000000000000000000003446 204.0
BYD1_k127_6134406_18 Ferredoxin - - - 0.0000000000000000000000000000000000000002316 149.0
BYD1_k127_6134406_19 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000000000000000000000000000000001083 151.0
BYD1_k127_6134406_2 Belongs to the peptidase M16 family K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008476 596.0
BYD1_k127_6134406_20 Cytochrome c - - - 0.00000000000000000000000000000000005821 137.0
BYD1_k127_6134406_21 - - - - 0.00000000000000000000000000003689 121.0
BYD1_k127_6134406_22 - - - - 0.000000000000000002399 94.0
BYD1_k127_6134406_23 - - - - 0.000000000000004356 79.0
BYD1_k127_6134406_24 - - - - 0.00000000000005592 73.0
BYD1_k127_6134406_3 FtsX-like permease family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006232 579.0
BYD1_k127_6134406_4 Peptidase M16 K07263 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 501.0
BYD1_k127_6134406_5 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006386 480.0
BYD1_k127_6134406_6 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 469.0
BYD1_k127_6134406_7 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003856 449.0
BYD1_k127_6134406_8 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008593 375.0
BYD1_k127_6134406_9 AAA domain, putative AbiEii toxin, Type IV TA system K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001219 362.0
BYD1_k127_6222041_0 Protein of unknown function - - - 0.0 1109.0
BYD1_k127_6222041_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1090.0
BYD1_k127_6222041_10 His Kinase A (phosphoacceptor) domain K07645 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 439.0
BYD1_k127_6222041_11 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 444.0
BYD1_k127_6222041_12 Ribulose-phosphate 3 epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001213 433.0
BYD1_k127_6222041_13 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005586 382.0
BYD1_k127_6222041_14 Belongs to the TrpC family K01609 - 4.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 371.0
BYD1_k127_6222041_15 anthranilate K01658 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 340.0
BYD1_k127_6222041_16 Transcriptional regulatory protein, C terminal K07666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 332.0
BYD1_k127_6222041_17 Transcriptional regulatory protein, C terminal K02483 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 331.0
BYD1_k127_6222041_18 Phosphoglycolate phosphatase K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 321.0
BYD1_k127_6222041_19 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 323.0
BYD1_k127_6222041_2 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657 - 4.1.3.27 5.901e-245 764.0
BYD1_k127_6222041_20 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004323 262.0
BYD1_k127_6222041_21 ubiE/COQ5 methyltransferase family K00570 - 2.1.1.17,2.1.1.71 0.000000000000000000000000000000000000000000000000000000000000000000000000004485 264.0
BYD1_k127_6222041_22 Gram-negative porin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005698 249.0
BYD1_k127_6222041_24 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000001235 218.0
BYD1_k127_6222041_25 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000001188 194.0
BYD1_k127_6222041_26 Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000000001289 168.0
BYD1_k127_6222041_27 Large family of predicted nucleotide-binding domains - - - 0.00000000000000000000000000000000000000008221 157.0
BYD1_k127_6222041_28 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000000000487 152.0
BYD1_k127_6222041_29 - - - - 0.00000000000000000001779 101.0
BYD1_k127_6222041_3 modulator of DNA gyrase K03568 - - 9.124e-239 745.0
BYD1_k127_6222041_31 Domain of unknown function (DUF1924) - - - 0.0000000000005186 74.0
BYD1_k127_6222041_32 Conserved hypothetical protein 698 - - - 0.0000000001683 68.0
BYD1_k127_6222041_33 Antitoxin Phd_YefM, type II toxin-antitoxin system - - - 0.0000000009533 63.0
BYD1_k127_6222041_4 sulfatase - - - 7.159e-232 737.0
BYD1_k127_6222041_5 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007896 579.0
BYD1_k127_6222041_6 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006928 562.0
BYD1_k127_6222041_7 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766 - 2.4.2.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 542.0
BYD1_k127_6222041_8 Long-chain fatty acid transport protein K06076 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 490.0
BYD1_k127_6222041_9 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004414 460.0
BYD1_k127_6273609_0 COG0641 Arylsulfatase regulator (Fe-S oxidoreductase) K06871 - - 4.271e-218 701.0
BYD1_k127_6273609_1 belongs to the aldehyde dehydrogenase family K00138 - - 5.713e-213 663.0
BYD1_k127_6273609_2 Quinohemoprotein amine dehydrogenase, alpha subunit domain II K08685 - 1.4.9.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000985 604.0
BYD1_k127_6273609_3 quinohemoprotein amine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 522.0
BYD1_k127_6273609_4 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000814 308.0
BYD1_k127_6273609_5 Protein of unknown function (DUF779) K09959 - - 0.000000000000000000000000000000000000000000000000000000001611 209.0
BYD1_k127_6273609_6 Quinohemoprotein amine dehydrogenase, gamma subunit - - - 0.000000000000000000000000000000000000000000000006914 185.0
BYD1_k127_6374021_0 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003881 568.0
BYD1_k127_6374021_1 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001105 385.0
BYD1_k127_6374021_2 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000000000002661 215.0
BYD1_k127_6374021_3 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000004994 188.0
BYD1_k127_6374021_4 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.000000000000000000000000000000000000000000000002402 175.0
BYD1_k127_6374021_5 Modulates RecA activity K03565 - - 0.00000000000000000000000000000000000000002598 157.0
BYD1_k127_6374021_6 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000001616 134.0
BYD1_k127_6390008_0 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 416.0
BYD1_k127_6390008_1 chemotaxis K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008716 374.0
BYD1_k127_6390008_2 chemotaxis K05874 - - 0.0000000000000000000000000015 122.0
BYD1_k127_6422471_0 Nitrite and sulphite reductase 4Fe-4S domain K11181 - 1.8.99.5 7.099e-216 672.0
BYD1_k127_6422471_1 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008523 349.0
BYD1_k127_6424954_0 COG0474 Cation transport ATPase - - - 0.0 1059.0
BYD1_k127_6424954_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005075 554.0
BYD1_k127_6424954_2 Sodium hydrogen exchanger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001576 491.0
BYD1_k127_6424954_3 Diguanylate cyclase, GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004058 379.0
BYD1_k127_6424954_4 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001854 354.0
BYD1_k127_6424954_5 Peptidase C26 K07010 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002831 341.0
BYD1_k127_6424954_6 LUD domain K00782 - - 0.000000000000000000000000000000000000000000000000000000000000000000001426 243.0
BYD1_k127_6467991_0 cyclic-guanylate-specific phosphodiesterase activity - - - 1.899e-201 653.0
BYD1_k127_6467991_1 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000426 586.0
BYD1_k127_6467991_10 Ni,Fe-hydrogenase I large subunit - - - 0.000000000000000000000004601 112.0
BYD1_k127_6467991_11 - - - - 0.00000000000000002001 85.0
BYD1_k127_6467991_12 Protein of unknown function (DUF465) - - - 0.0000000000000006957 84.0
BYD1_k127_6467991_13 PFAM pyridoxamine 5'-phosphate oxidase-related, FMN-binding K07226 - - 0.0000000000000009598 84.0
BYD1_k127_6467991_2 Cobalt uptake substrate-specific transmembrane region K02007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 370.0
BYD1_k127_6467991_3 Helix-turn-helix type 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000265 359.0
BYD1_k127_6467991_4 PFAM ABC transporter K02006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000317 339.0
BYD1_k127_6467991_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007488 267.0
BYD1_k127_6467991_6 NADH dehydrogenase NAD(P)H nitroreductase K09019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007127 244.0
BYD1_k127_6467991_7 Transcriptional regulator K07722 - - 0.000000000000000000000000000000000000000000000000000000000000000003897 229.0
BYD1_k127_6467991_8 Cobalt transport protein K02008 - - 0.000000000000000000000000000000000000000000000000000000000001399 224.0
BYD1_k127_6467991_9 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000000002089 204.0
BYD1_k127_6468630_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003843 391.0
BYD1_k127_6468630_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003723 256.0
BYD1_k127_6468630_2 RNA-binding protein containing KH domain possibly ribosomal protein - - - 0.000000000000000000000000000000000001724 141.0
BYD1_k127_6478229_0 PFAM malic K00029 - 1.1.1.40 0.0 1121.0
BYD1_k127_6478229_1 DNA helicase K03657 - 3.6.4.12 0.0 1031.0
BYD1_k127_6478229_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 525.0
BYD1_k127_6478229_3 Cobyrinic acid ac-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 367.0
BYD1_k127_6478229_4 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 331.0
BYD1_k127_6478229_5 Cobyrinic acid ac-diamide synthase K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 304.0
BYD1_k127_6478229_6 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000008282 259.0
BYD1_k127_6478229_7 (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000001049 248.0
BYD1_k127_6478229_8 - - - - 0.00001327 53.0
BYD1_k127_6478229_9 diguanylate cyclase - - - 0.00001579 49.0
BYD1_k127_6531323_0 Domain of unknown function (DUF4131) K02238 - - 4.22e-255 808.0
BYD1_k127_6531323_1 homoserine dehydrogenase K00003 - 1.1.1.3 7.481e-237 737.0
BYD1_k127_6531323_10 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005911 452.0
BYD1_k127_6531323_11 GDP-mannose 4,6 dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 420.0
BYD1_k127_6531323_12 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 422.0
BYD1_k127_6531323_13 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008062 396.0
BYD1_k127_6531323_14 Belongs to the NadC ModD family K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002924 389.0
BYD1_k127_6531323_15 Formyl transferase, C-terminal domain K00604 - 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 383.0
BYD1_k127_6531323_16 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009436 329.0
BYD1_k127_6531323_17 Part of a membrane complex involved in electron transport K03617 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004608 314.0
BYD1_k127_6531323_18 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002724 314.0
BYD1_k127_6531323_19 Part of a membrane complex involved in electron transport K03613 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002637 298.0
BYD1_k127_6531323_2 Aminotransferase K14260 - 2.6.1.2,2.6.1.66 3.188e-232 724.0
BYD1_k127_6531323_20 protein conserved in bacteria K09928 - - 0.000000000000000000000000000000000000000000000000000000000000000000001269 241.0
BYD1_k127_6531323_21 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000000000000000000000248 240.0
BYD1_k127_6531323_22 Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane K11941 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0008150,GO:0008152,GO:0009311,GO:0016020,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0044238,GO:0044464,GO:0071704,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000002418 221.0
BYD1_k127_6531323_23 Small multidrug resistance - - - 0.00000000000000000000000000000000000000000000000003098 184.0
BYD1_k127_6531323_24 - - - - 0.0000000000000001559 79.0
BYD1_k127_6531323_3 Threonine synthase K01733 - 4.2.3.1 4.996e-230 726.0
BYD1_k127_6531323_4 Part of a membrane complex involved in electron transport K03615 - - 3.587e-205 650.0
BYD1_k127_6531323_5 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 586.0
BYD1_k127_6531323_6 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004193 582.0
BYD1_k127_6531323_7 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 579.0
BYD1_k127_6531323_8 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 505.0
BYD1_k127_6531323_9 Pfam Glycosyl transferase family 2 K10012 - 2.4.2.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 495.0
BYD1_k127_6599188_0 CobB/CobQ-like glutamine amidotransferase domain K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 571.0
BYD1_k127_6599188_1 Histidine kinase K02482 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003226 514.0
BYD1_k127_6599188_10 COG0079 Histidinol-phosphate aromatic aminotransferase and cobyric acid decarboxylase K02225 - - 0.000000000000000000000000000000000000000000001264 169.0
BYD1_k127_6599188_11 Outer membrane protein V K07274 - - 0.00000000000000000000000000000000000000000003207 170.0
BYD1_k127_6599188_12 belongs to the bacterial solute-binding protein 3 family K02030,K10022 - - 0.000000000000000000000000000000000004708 158.0
BYD1_k127_6599188_13 Protein conserved in bacteria K09954 - - 0.0000000000000000000000000000000103 128.0
BYD1_k127_6599188_15 Invasion gene expression up-regulator, SirB - - - 0.00000000000000000000000001877 117.0
BYD1_k127_6599188_16 - - - - 0.00000000000000000009514 102.0
BYD1_k127_6599188_17 - - - - 0.00000000004043 68.0
BYD1_k127_6599188_2 Periplasmic binding protein domain K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 481.0
BYD1_k127_6599188_3 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 410.0
BYD1_k127_6599188_4 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 396.0
BYD1_k127_6599188_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 409.0
BYD1_k127_6599188_6 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 377.0
BYD1_k127_6599188_7 (GGDEF) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000662 371.0
BYD1_k127_6599188_8 Cob(II)yrinic acid a,c-diamide reductase K02303,K04719 - 1.13.11.79,2.1.1.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 329.0
BYD1_k127_6599188_9 Phasin protein - - - 0.000000000000000000000000000000000000000000000000000000002069 204.0
BYD1_k127_6616707_0 Formate dehydrogenase alpha subunit K00123 - 1.17.1.9 0.0 1495.0
BYD1_k127_6616707_1 Acyl-CoA dehydrogenase N terminal K20035 - - 1.304e-238 751.0
BYD1_k127_6616707_10 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007349 370.0
BYD1_k127_6616707_11 ABC-type branched-chain amino acid transport K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 347.0
BYD1_k127_6616707_12 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003138 342.0
BYD1_k127_6616707_13 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 315.0
BYD1_k127_6616707_14 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009723 286.0
BYD1_k127_6616707_15 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001767 268.0
BYD1_k127_6616707_16 Hemerythrin HHE cation binding - - - 0.00000000000000000000000000000000000000001407 160.0
BYD1_k127_6616707_17 Formate dehydrogenase gamma subunit K00127 - - 0.000000000000000000000000000000008185 129.0
BYD1_k127_6616707_18 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.00000000000002209 84.0
BYD1_k127_6616707_2 PFAM Respiratory-chain NADH dehydrogenase domain 51 kDa subunit K00124 - - 2.563e-235 737.0
BYD1_k127_6616707_3 Periplasmic binding protein domain K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001806 565.0
BYD1_k127_6616707_4 Extracellular liganD-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 548.0
BYD1_k127_6616707_5 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005522 455.0
BYD1_k127_6616707_6 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 466.0
BYD1_k127_6616707_7 Extracellular liganD-binding receptor K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 420.0
BYD1_k127_6616707_8 branched-chain amino acid K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 381.0
BYD1_k127_6616707_9 LysR substrate binding domain K19338 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 372.0
BYD1_k127_6619831_0 Cytochrome c7 and related cytochrome c - - - 5.15e-287 925.0
BYD1_k127_6619831_1 heat shock protein binding - - - 8.587e-237 748.0
BYD1_k127_6619831_10 Glycine zipper 2TM domain - - - 0.000000000000001787 83.0
BYD1_k127_6619831_2 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 1.041e-213 689.0
BYD1_k127_6619831_3 protein with a C-terminal OMP (outer membrane protein) domain - - - 4.06e-206 668.0
BYD1_k127_6619831_4 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 539.0
BYD1_k127_6619831_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 406.0
BYD1_k127_6619831_6 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002187 353.0
BYD1_k127_6619831_7 COG0564 Pseudouridylate synthases, 23S RNA-specific K06175 - 5.4.99.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008679 335.0
BYD1_k127_6619831_8 ferredoxin-NADP+ reductase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 299.0
BYD1_k127_6619831_9 cytochrome complex assembly K02200 - - 0.000000000000000000000008777 108.0
BYD1_k127_6658536_0 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 2.258e-217 702.0
BYD1_k127_6658536_1 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006938 522.0
BYD1_k127_6658536_2 mechanosensitive K05802 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008856 511.0
BYD1_k127_6658536_3 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003652 285.0
BYD1_k127_6658536_4 SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001301 284.0
BYD1_k127_6658536_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000006051 236.0
BYD1_k127_6658536_6 COG1502 Phosphatidylserine phosphatidylglycerophosphate cardiolipi n synthases and related enzymes - - - 0.0000000000000000000000000000000000000000000000002711 185.0
BYD1_k127_6658536_7 Protein of unknown function (DUF3108) - - - 0.00000000000000000000000000000000000000000001154 178.0
BYD1_k127_6658536_8 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.0000000000000000002728 87.0
BYD1_k127_6715301_0 Tex-like protein N-terminal domain K06959 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010212,GO:0044424,GO:0044444,GO:0044464,GO:0050896 - 0.0 1143.0
BYD1_k127_6715301_1 Acyl-CoA dehydrogenase N terminal K20035 - - 1.738e-271 846.0
BYD1_k127_6715301_10 Belongs to the enoyl-CoA hydratase isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003819 384.0
BYD1_k127_6715301_11 Protein of unknown function (DUF1631) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001441 404.0
BYD1_k127_6715301_12 Hsp33 protein K04083 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000149 331.0
BYD1_k127_6715301_13 PFAM Spermine synthase K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 304.0
BYD1_k127_6715301_14 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000003059 241.0
BYD1_k127_6715301_15 'signal transduction protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002029 232.0
BYD1_k127_6715301_16 Cobalt uptake substrate-specific transmembrane region - - - 0.0000000000000000000000000000000000000000000000000000000000000000896 228.0
BYD1_k127_6715301_17 Belongs to the MsrB Met sulfoxide reductase family K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000000001215 220.0
BYD1_k127_6715301_18 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000002305 218.0
BYD1_k127_6715301_19 Belongs to the ArsC family K00537 - 1.20.4.1 0.000000000000000000000000000000000000006685 148.0
BYD1_k127_6715301_2 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 3.819e-196 620.0
BYD1_k127_6715301_20 FOG TPR repeat, SEL1 subfamily K07126 - - 0.0000000000003451 73.0
BYD1_k127_6715301_3 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002484 516.0
BYD1_k127_6715301_4 amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 489.0
BYD1_k127_6715301_5 Protein of unknown function (DUF2863) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 473.0
BYD1_k127_6715301_6 Electron transfer flavoprotein alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000365 460.0
BYD1_k127_6715301_7 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001975 446.0
BYD1_k127_6715301_8 PFAM extracellular solute-binding protein family 1 K02012 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003233 433.0
BYD1_k127_6715301_9 Electron transfer flavoprotein K03521 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 417.0
BYD1_k127_6829328_0 Belongs to the UPF0061 (SELO) family - - - 1.052e-217 686.0
BYD1_k127_6829328_1 Dinitrogenase iron-molybdenum cofactor - - - 0.00000000000000000000000000000000000000000000001173 174.0
BYD1_k127_6829328_2 - - - - 0.00000000000000000000000000000000000002855 150.0
BYD1_k127_6829328_4 Domain of unknown function (DUF4304) - - - 0.0000000007132 69.0
BYD1_k127_6829328_5 PspC domain - - - 0.0002551 49.0
BYD1_k127_6830514_0 Bacterial transglutaminase-like N-terminal - - - 0.0 1568.0
BYD1_k127_6830514_1 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 9.065e-272 845.0
BYD1_k127_6830514_10 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004945 366.0
BYD1_k127_6830514_11 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005389 362.0
BYD1_k127_6830514_12 PFAM 20S proteasome, A and B subunits K07395 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004654 326.0
BYD1_k127_6830514_13 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000548 340.0
BYD1_k127_6830514_14 'signal transduction protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002743 300.0
BYD1_k127_6830514_15 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000008378 288.0
BYD1_k127_6830514_16 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000002842 241.0
BYD1_k127_6830514_17 Protein of unknown function, DUF269 - - - 0.00000000000000000000000000000000000000000000000000000000000000000001826 235.0
BYD1_k127_6830514_18 Belongs to the UPF0178 family K09768 - - 0.00000000000000000000000000000000000000000000000000000000000000000002192 235.0
BYD1_k127_6830514_19 PFAM Glyoxalase bleomycin resistance protein dioxygenase K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000000000000000000001171 210.0
BYD1_k127_6830514_2 Circularly permuted ATP-grasp type 2 - - - 7.692e-249 774.0
BYD1_k127_6830514_20 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000002427 203.0
BYD1_k127_6830514_21 Thioesterase superfamily K07107 - - 0.000000000000000000000000000000000000000000000000001359 186.0
BYD1_k127_6830514_22 regulatory - - - 0.000000000000000000000000000000000000000000000000004688 187.0
BYD1_k127_6830514_23 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000006526 177.0
BYD1_k127_6830514_24 Pfam Dinitrogenase iron-molybdenum cofactor K02596 - - 0.0000000000000000000000000000000000000000004125 168.0
BYD1_k127_6830514_25 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000001066 169.0
BYD1_k127_6830514_26 Iron-sulphur cluster biosynthesis - - - 0.000000000000000000000000000000001008 140.0
BYD1_k127_6830514_27 Glyoxalase-like domain K06996 - - 0.000000000000000000000000000000003255 134.0
BYD1_k127_6830514_28 4Fe-4S double cluster binding domain - - - 0.0000000000000000000000000000007551 123.0
BYD1_k127_6830514_29 ankyrin repeat - GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006888,GO:0008092,GO:0008093,GO:0008150,GO:0016020,GO:0016192,GO:0030674,GO:0044464,GO:0046907,GO:0048193,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0060090,GO:0071944 - 0.0000000000000000000000000003222 123.0
BYD1_k127_6830514_3 Nitrogenase component 1 type Oxidoreductase K02587 - - 4.618e-242 768.0
BYD1_k127_6830514_30 - - - - 0.00000000000000000000000003149 112.0
BYD1_k127_6830514_31 Rop-like - - - 0.00000000000000000000000007414 107.0
BYD1_k127_6830514_32 - - - - 0.0000000000000000000000001325 112.0
BYD1_k127_6830514_33 - - - - 0.00000000009285 64.0
BYD1_k127_6830514_34 Positive regulator of sigma(E), RseC/MucC - - - 0.0002737 51.0
BYD1_k127_6830514_35 Specific class of high-redox-potential 4Fe-4S ferredoxins. Functions in anaerobic electron transport in most purple and in some other photosynthetic bacteria and in at least one genus (Paracoccus) of halophilic, denitrifying bacteria - - - 0.0005274 48.0
BYD1_k127_6830514_4 Nitrogenase component 1 type Oxidoreductase K02592 - - 3.63e-210 662.0
BYD1_k127_6830514_5 Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine K04487 - 2.8.1.7 5.575e-210 659.0
BYD1_k127_6830514_6 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007718 599.0
BYD1_k127_6830514_7 Ricin-type beta-trefoil - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001645 514.0
BYD1_k127_6830514_8 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488,K13819 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002667 453.0
BYD1_k127_6830514_9 OST-HTH/LOTUS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000105 374.0
BYD1_k127_6859839_0 Concanavalin A-like lectin/glucanases superfamily K12287 - - 2.424e-243 794.0
BYD1_k127_6859839_1 Secretin N-terminal domain K02453,K12282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 300.0
BYD1_k127_6859839_10 Metallo-peptidase family M12B Reprolysin-like - - - 0.0000004545 64.0
BYD1_k127_6859839_2 Pilus assembly protein K12279 - - 0.0000000000000000000000000000000000000000000000000000000000000003237 231.0
BYD1_k127_6859839_3 Prokaryotic N-terminal methylation motif K12285 - - 0.00000000000000000000000000000000000000000000000000000000000007375 225.0
BYD1_k127_6859839_4 Type II secretion system (T2SS), protein M K12280 - - 0.0000000000000000000000000000000000000005411 168.0
BYD1_k127_6859839_5 type IV pilus modification protein PilV K10927 - - 0.0000000000000000000000000000000000004515 145.0
BYD1_k127_6859839_6 PFAM Fimbrial assembly family protein - - - 0.0000000000000000000000000001122 128.0
BYD1_k127_6859839_7 Pilus assembly protein PilX - - - 0.0000000000000000000001122 106.0
BYD1_k127_6859839_8 Pfam:N_methyl_2 K10924 - - 0.0000000000002775 76.0
BYD1_k127_6859839_9 - K12281 - - 0.000000003087 68.0
BYD1_k127_6874354_0 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 7.606e-220 689.0
BYD1_k127_6874354_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 333.0
BYD1_k127_6874354_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000006932 222.0
BYD1_k127_6901418_0 aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0 1031.0
BYD1_k127_6901418_1 fad dependent oxidoreductase K07137 - - 2.499e-264 822.0
BYD1_k127_6901418_10 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001261 458.0
BYD1_k127_6901418_11 Bacterial extracellular solute-binding protein K05772 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005214 434.0
BYD1_k127_6901418_12 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005177 435.0
BYD1_k127_6901418_13 ATPase family associated with various cellular activities (AAA) K03924 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 407.0
BYD1_k127_6901418_14 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 382.0
BYD1_k127_6901418_15 RNA polymerase sigma K03087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 379.0
BYD1_k127_6901418_16 lytic murein transglycosylase K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 357.0
BYD1_k127_6901418_17 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 339.0
BYD1_k127_6901418_18 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 330.0
BYD1_k127_6901418_19 Beta-lactamase superfamily domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004485 320.0
BYD1_k127_6901418_2 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000279 605.0
BYD1_k127_6901418_20 TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 324.0
BYD1_k127_6901418_21 Signal peptidase, peptidase S26 K03100 - 3.4.21.89 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004863 302.0
BYD1_k127_6901418_22 Binding-protein-dependent transport system inner membrane component K05773 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003696 299.0
BYD1_k127_6901418_23 Protein of unknown function (DUF1631) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 315.0
BYD1_k127_6901418_24 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K05796 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000989 288.0
BYD1_k127_6901418_25 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000104 299.0
BYD1_k127_6901418_26 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 287.0
BYD1_k127_6901418_27 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005848 274.0
BYD1_k127_6901418_28 Glyoxalase-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001272 273.0
BYD1_k127_6901418_29 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000001406 263.0
BYD1_k127_6901418_3 Transglutaminase/protease-like homologues K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 606.0
BYD1_k127_6901418_30 esterase of the alpha beta hydrolase fold K07002 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001028 265.0
BYD1_k127_6901418_31 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001559 265.0
BYD1_k127_6901418_32 Belongs to the ABC transporter superfamily K06857 - 3.6.3.55 0.0000000000000000000000000000000000000000000000000000000000000000001079 247.0
BYD1_k127_6901418_33 PBP superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003271 239.0
BYD1_k127_6901418_34 COG0739 Membrane proteins related to metalloendopeptidases K06194 - - 0.000000000000000000000000000000000000000000000000000000000001794 222.0
BYD1_k127_6901418_35 Belongs to the UPF0225 family K09858 - - 0.00000000000000000000000000000000000000000000000000000004001 198.0
BYD1_k127_6901418_36 Mut7-C ubiquitin - - - 0.00000000000000000000000008983 113.0
BYD1_k127_6901418_37 acyl-CoA dehydrogenase K06445 - - 0.000000000000000000000002101 104.0
BYD1_k127_6901418_38 - - - - 0.000000000000000000000003284 111.0
BYD1_k127_6901418_39 Domain of unknown function (DUF4259) - - - 0.00000000000000000000006992 103.0
BYD1_k127_6901418_4 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004746 565.0
BYD1_k127_6901418_41 Protein of unknown function (DUF3617) - - - 0.00000000000000002096 94.0
BYD1_k127_6901418_42 - - - - 0.0000005155 55.0
BYD1_k127_6901418_43 - - - - 0.00001274 51.0
BYD1_k127_6901418_5 PAS fold K10715,K20974 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003795 582.0
BYD1_k127_6901418_6 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 523.0
BYD1_k127_6901418_7 Belongs to the methyltransferase superfamily K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 509.0
BYD1_k127_6901418_8 COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 488.0
BYD1_k127_6901418_9 (Lipo)protein K07287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004146 484.0
BYD1_k127_6910646_0 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 613.0
BYD1_k127_6910646_1 Polysulphide reductase, NrfD K00185 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 506.0
BYD1_k127_6910646_2 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003892 491.0
BYD1_k127_6910646_3 Histidine kinase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 380.0
BYD1_k127_6910646_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001114 360.0
BYD1_k127_6910646_5 PFAM 4Fe-4S ferredoxin, iron-sulfur binding domain protein K00184 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 355.0
BYD1_k127_6910646_6 response regulator K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005073 274.0
BYD1_k127_6910646_7 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes K01515 - 3.6.1.13 0.000000000000000000000000000000000000000000000000000000000000000000003014 238.0
BYD1_k127_6910646_8 - - - - 0.0000000000000000000000000001205 122.0
BYD1_k127_6910646_9 Iron-sulphur cluster biosynthesis K13628 - - 0.0000000000000000000000001716 112.0
BYD1_k127_6956090_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 1.745e-197 619.0
BYD1_k127_6956090_1 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002825 499.0
BYD1_k127_6956090_2 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 424.0
BYD1_k127_6956090_3 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000000001146 201.0
BYD1_k127_6956090_4 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000000006926 198.0
BYD1_k127_6956090_5 CBS domain - - - 0.0000000000000000000000000000000000000000000000000001428 189.0
BYD1_k127_6956090_6 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 0.000000000000000000000000000000000000000000001113 168.0
BYD1_k127_6956090_7 Protein of unknown function (DUF465) K09794 - - 0.0000000000000000000000000008172 128.0
BYD1_k127_6956090_8 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.000000001274 60.0
BYD1_k127_6999069_0 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000608 426.0
BYD1_k127_6999069_1 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006356 362.0
BYD1_k127_6999069_10 Putative heavy-metal-binding - - - 0.00000000000000000000000000000000000002675 147.0
BYD1_k127_6999069_2 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 354.0
BYD1_k127_6999069_3 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 342.0
BYD1_k127_6999069_4 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 322.0
BYD1_k127_6999069_5 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000001202 228.0
BYD1_k127_6999069_6 Protein of unknown function, DUF484 K09921 - - 0.00000000000000000000000000000000000000000000000000000000000001865 228.0
BYD1_k127_6999069_7 coa-binding K06929 - - 0.00000000000000000000000000000000000000000000000002218 182.0
BYD1_k127_6999069_8 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000009933 188.0
BYD1_k127_6999069_9 Belongs to the UPF0145 family - - - 0.0000000000000000000000000000000000000000001054 163.0
BYD1_k127_7098698_0 Nickel-dependent hydrogenase K06281 - 1.12.99.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004997 614.0
BYD1_k127_7098698_1 His Kinase A (phosphoacceptor) domain K19661 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002951 585.0
BYD1_k127_7098698_2 NiFe/NiFeSe hydrogenase small subunit C-terminal K00534 - 1.12.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005487 499.0
BYD1_k127_7098698_3 Bacterial regulatory protein, Fis family K19641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 304.0
BYD1_k127_7098698_4 Predicted metal-dependent hydrolase K07044 - - 0.000000000000000000000000000000000000000000000000000000000205 213.0
BYD1_k127_7098698_5 Dihaem cytochrome c - - - 0.0000000000000000000000000001502 121.0
BYD1_k127_7110830_0 GMP synthase C terminal domain K01951 - 6.3.5.2 2.678e-304 937.0
BYD1_k127_7110830_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.748e-259 805.0
BYD1_k127_7110830_2 pyruvate phosphate dikinase K01006,K01007 - 2.7.9.1,2.7.9.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002414 498.0
BYD1_k127_7110830_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000000000000000000000000000000000000000005475 183.0
BYD1_k127_7110830_4 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000004779 120.0
BYD1_k127_7110830_5 Domain of unknown function (DUF4124) - - - 0.0000000000007321 74.0
BYD1_k127_7113685_0 Thioredoxin domain K03387 - - 1.06e-237 756.0
BYD1_k127_7113685_1 Alkyl hydroperoxide reductase K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 364.0
BYD1_k127_7113685_2 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K12267 - 1.8.4.11,1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 289.0
BYD1_k127_7113685_3 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000000000005829 177.0
BYD1_k127_7113685_4 Esterase PHB depolymerase K03932 - - 0.00000000000000000000000000000000005805 151.0
BYD1_k127_7135723_0 AcrB/AcrD/AcrF family - - - 0.0 1296.0
BYD1_k127_7135723_1 poly(R)-hydroxyalkanoic acid synthase K03821 - - 1.25e-321 991.0
BYD1_k127_7135723_10 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 419.0
BYD1_k127_7135723_11 HMGL-like K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004812 426.0
BYD1_k127_7135723_12 Displays ATPase and GTPase activities K06958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005738 391.0
BYD1_k127_7135723_13 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 376.0
BYD1_k127_7135723_14 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 353.0
BYD1_k127_7135723_15 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004782 338.0
BYD1_k127_7135723_16 Enoyl-CoA hydratase/isomerase K13766,K15312 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 334.0
BYD1_k127_7135723_17 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 310.0
BYD1_k127_7135723_18 TIGRFAM Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 327.0
BYD1_k127_7135723_19 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000276 288.0
BYD1_k127_7135723_2 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 8.045e-316 977.0
BYD1_k127_7135723_20 HlyD family secretion protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003651 282.0
BYD1_k127_7135723_21 Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000003124 256.0
BYD1_k127_7135723_22 DSBA-like thioredoxin domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003544 254.0
BYD1_k127_7135723_23 Cobalamin B12-binding domain protein K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000005286 217.0
BYD1_k127_7135723_24 Bacterial transcriptional repressor C-terminal K09017 - - 0.0000000000000000000000000000000000000000000000000000006361 199.0
BYD1_k127_7135723_25 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000000000001484 193.0
BYD1_k127_7135723_26 NusG domain II - - - 0.000000000000000000000000000000000000000000000009602 176.0
BYD1_k127_7135723_27 transcriptional - - - 0.00000000000000000000000000000000000000000252 160.0
BYD1_k127_7135723_28 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.0000000000000000000000000000000000000009193 151.0
BYD1_k127_7135723_29 PFAM Rhodanese domain protein - - - 0.000000000000000000000000000000000000003372 148.0
BYD1_k127_7135723_3 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 1.902e-291 900.0
BYD1_k127_7135723_30 PIN domain - - - 0.00000000000000000000000003381 115.0
BYD1_k127_7135723_31 EamA-like transporter family - - - 0.0008077 46.0
BYD1_k127_7135723_4 Acyl-CoA dehydrogenase, C-terminal domain K00253 - 1.3.8.4 1.248e-228 715.0
BYD1_k127_7135723_5 Belongs to the thiolase family K00626 - 2.3.1.9 5.098e-207 661.0
BYD1_k127_7135723_6 COG1960 Acyl-CoA dehydrogenases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 596.0
BYD1_k127_7135723_7 Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006257 480.0
BYD1_k127_7135723_8 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 452.0
BYD1_k127_7135723_9 COG1538 Outer membrane protein K12340 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003234 451.0
BYD1_k127_7165423_0 Biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 4.172e-261 809.0
BYD1_k127_7165423_1 epimerase dehydratase K08679 - 5.1.3.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002207 498.0
BYD1_k127_7165423_2 COG0524 Sugar kinases, ribokinase family K00856 - 2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007928 488.0
BYD1_k127_7165423_3 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001989 384.0
BYD1_k127_7165423_4 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 374.0
BYD1_k127_7165423_5 acyltransferase K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000006331 232.0
BYD1_k127_7165423_6 zinc-ribbon domain - - - 0.00000000000000000000000000000000000000003578 167.0
BYD1_k127_716621_0 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 390.0
BYD1_k127_716621_1 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005311 390.0
BYD1_k127_716621_2 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 283.0
BYD1_k127_716621_3 Belongs to the CDS family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000002447 243.0
BYD1_k127_716621_4 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.0000000000000000000000000000001253 127.0
BYD1_k127_7182749_0 Alpha-L-arabinofuranosidase B, catalytic - - - 1.049e-212 703.0
BYD1_k127_7182749_1 Xylose isomerase-like TIM barrel K03335 - 4.2.1.44 0.00000000000000000000000000000000000000000000004025 196.0
BYD1_k127_7182749_2 Sulfatase-modifying factor enzyme 1 - - - 0.0000009685 50.0
BYD1_k127_7198376_0 COG0474 Cation transport ATPase - - - 1.248e-297 930.0
BYD1_k127_7198376_1 Peptidase C26 K01658,K07010 - 4.1.3.27 0.000000000000846 68.0
BYD1_k127_7244901_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1420.0
BYD1_k127_7244901_1 DNA helicase K03657 - 3.6.4.12 0.0 1045.0
BYD1_k127_7244901_10 Bacterial protein of unknown function (DUF898) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000706 367.0
BYD1_k127_7244901_11 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001182 364.0
BYD1_k127_7244901_12 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 327.0
BYD1_k127_7244901_13 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001164 271.0
BYD1_k127_7244901_14 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001671 268.0
BYD1_k127_7244901_15 Alpha/beta hydrolase family K01055 - 3.1.1.24 0.000000000000000000000000000000000000000000000000000000000000000000000000001371 271.0
BYD1_k127_7244901_16 COG0350 Methylated DNA-protein cysteine methyltransferase K00567 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000000000002461 224.0
BYD1_k127_7244901_17 Hemerythrin HHE cation binding domain K07216 - - 0.000000000000000000000000000000000000000000000000000000000000151 217.0
BYD1_k127_7244901_18 Peptidase C14 caspase catalytic subunit p20 - - - 0.000000000000000000000000000000000000000000000000000004145 203.0
BYD1_k127_7244901_19 Domain of unknown function (DUF1850) - - - 0.000000000000000000000000000000000000001684 168.0
BYD1_k127_7244901_2 TRAP transporter 4TM 12TM fusion - - - 9.668e-319 988.0
BYD1_k127_7244901_20 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.00000000000000000000000000000000007746 148.0
BYD1_k127_7244901_21 PFAM malic K00029 - 1.1.1.40 0.0000000000000002073 81.0
BYD1_k127_7244901_22 - - - - 0.00000002568 61.0
BYD1_k127_7244901_3 PFAM acyl-CoA dehydrogenase domain protein K00252 - 1.3.8.6 2.595e-201 634.0
BYD1_k127_7244901_4 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 - 1.2.1.41 2.851e-195 619.0
BYD1_k127_7244901_5 TRAP transporter solute receptor, TAXI family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006046 445.0
BYD1_k127_7244901_6 Transcriptional regulator K13634 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005441 424.0
BYD1_k127_7244901_7 Sulfite reductase K00381 - 1.8.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003624 400.0
BYD1_k127_7244901_8 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 386.0
BYD1_k127_7244901_9 recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000166 375.0
BYD1_k127_7348761_0 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000726 338.0
BYD1_k127_7348761_1 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 306.0
BYD1_k127_7348761_2 PFAM PilT protein domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000009133 235.0
BYD1_k127_7348761_3 integral membrane protein K02221 - - 0.000000000000000000000000000000000000000000000001389 181.0
BYD1_k127_7348761_4 prlF antitoxin for toxin YhaV_toxin - - - 0.000000000000000000000000000000001374 132.0
BYD1_k127_7348761_5 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.00000000000000000000000000003269 117.0
BYD1_k127_7348761_6 DUF167 K09131 - - 0.000000000000000000000001662 115.0
BYD1_k127_7418505_0 COG5265 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components K06147 - - 9.107e-275 856.0
BYD1_k127_7418505_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005519 574.0
BYD1_k127_7418505_2 PFAM ATP-binding region, ATPase domain protein K02668 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003405 434.0
BYD1_k127_7418505_3 Negative regulator of beta-lactamase expression K03806 - 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000005935 261.0
BYD1_k127_7418505_4 Thioesterase superfamily K10806 - - 0.0000000000000000000000000000000000000000000001766 186.0
BYD1_k127_7418505_5 PFAM Extracellular solute-binding protein, family 3 K10001 - - 0.000000000000000000000000008395 112.0
BYD1_k127_7418505_6 - K06950 - - 0.00000000127 63.0
BYD1_k127_743017_0 Tripartite ATP-independent periplasmic transporter, DctM component K11690 - - 1.481e-238 741.0
BYD1_k127_743017_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 2.185e-230 719.0
BYD1_k127_743017_10 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 528.0
BYD1_k127_743017_11 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 498.0
BYD1_k127_743017_12 HflC and HflK could regulate a protease K04087 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 460.0
BYD1_k127_743017_13 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009912 432.0
BYD1_k127_743017_14 PFAM Tripartite ATP-independent periplasmic transporter, DctQ component K11689 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007906 386.0
BYD1_k127_743017_15 response regulator K11712 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000926 262.0
BYD1_k127_743017_16 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000005446 254.0
BYD1_k127_743017_17 TilS substrate binding domain K04075 - 6.3.4.19 0.00000000000000000000000000000000000000000000000000000000000000000000003698 252.0
BYD1_k127_743017_18 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000005905 240.0
BYD1_k127_743017_19 type 4 pilus biogenesis protein K02656 - - 0.0000000000000000000000000000000000000000000000000000000000002153 229.0
BYD1_k127_743017_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 7.109e-207 649.0
BYD1_k127_743017_20 Domain of unknown function (DUF4115) K15539 - - 0.00000000000000000000000000000000000000002912 167.0
BYD1_k127_743017_21 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000599 150.0
BYD1_k127_743017_22 protein conserved in bacteria K09937 - - 0.0000000000000000016 86.0
BYD1_k127_743017_3 Signal transduction histidine kinase K11711 - 2.7.13.3 6.492e-203 655.0
BYD1_k127_743017_4 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 1.497e-196 623.0
BYD1_k127_743017_5 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.036e-195 617.0
BYD1_k127_743017_6 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 591.0
BYD1_k127_743017_7 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 578.0
BYD1_k127_743017_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 554.0
BYD1_k127_743017_9 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008789 531.0
BYD1_k127_7447236_0 carbohydrate binding - - - 0.0 4297.0
BYD1_k127_7447236_1 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase K01621 - 4.1.2.22,4.1.2.9 0.0 1408.0
BYD1_k127_7447236_10 AraC family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007428 428.0
BYD1_k127_7447236_11 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003236 370.0
BYD1_k127_7447236_12 COG0501 Zn-dependent protease with chaperone function - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000771 373.0
BYD1_k127_7447236_13 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000001438 246.0
BYD1_k127_7447236_14 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406 - - 0.00000000000000000000000000000000000000000000000000000000000000263 237.0
BYD1_k127_7447236_15 molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.0000000000000000000000000000000000000000000000000000000000002282 216.0
BYD1_k127_7447236_16 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.000000000000000000000000000000000000000000000000000000000005698 216.0
BYD1_k127_7447236_17 Periplasmic or secreted lipoprotein - - - 0.0000000000000000000000000000000000000000007642 161.0
BYD1_k127_7447236_18 Phasin protein - - - 0.000000000000000000000000000000000000005059 156.0
BYD1_k127_7447236_19 Coenzyme A transferase K01026 - 2.8.3.1 0.000000000000000000000000000001338 122.0
BYD1_k127_7447236_2 PFAM Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase - - - 0.0 1262.0
BYD1_k127_7447236_20 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin K03636 - - 0.0000000000000000000000000004392 115.0
BYD1_k127_7447236_21 - - - - 0.000000000000000000000116 100.0
BYD1_k127_7447236_22 ribosome binding K05594 - - 0.000000000000000000003164 98.0
BYD1_k127_7447236_23 Protein of unknown function (DUF3309) - - - 0.00000000000000000006381 91.0
BYD1_k127_7447236_24 Protein of unknown function (DUF1161) - - - 0.000000000005591 78.0
BYD1_k127_7447236_25 - - - - 0.00000000002873 65.0
BYD1_k127_7447236_26 Protein of unknown function (DUF3567) - - - 0.00000000009155 68.0
BYD1_k127_7447236_27 Protein of unknown function (DUF3096) - - - 0.00002032 49.0
BYD1_k127_7447236_28 Prokaryotic cytochrome b561 K12262 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00004451 51.0
BYD1_k127_7447236_29 Hemolysin III K11068 - - 0.0002609 48.0
BYD1_k127_7447236_3 3-hydroxyacyl-CoA dehydrogenase K07516 - 1.1.1.35 0.0 1049.0
BYD1_k127_7447236_4 Ferrous iron transport protein B K04759 - - 1.129e-284 889.0
BYD1_k127_7447236_5 helicase K03722 - 3.6.4.12 4.484e-274 857.0
BYD1_k127_7447236_6 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 2.344e-244 773.0
BYD1_k127_7447236_7 Putative diguanylate phosphodiesterase - - - 2.232e-194 617.0
BYD1_k127_7447236_8 Belongs to the thiolase family K00632 - 2.3.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003787 589.0
BYD1_k127_7447236_9 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 452.0
BYD1_k127_7515911_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1873.0
BYD1_k127_7515911_1 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 0.0 1057.0
BYD1_k127_7515911_10 - - - - 0.00000000000000006056 88.0
BYD1_k127_7515911_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 3.975e-289 904.0
BYD1_k127_7515911_3 Solute carrier family 35 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004991 362.0
BYD1_k127_7515911_4 peptidylprolyl isomerase K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004889 319.0
BYD1_k127_7515911_5 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001172 280.0
BYD1_k127_7515911_6 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003163 262.0
BYD1_k127_7515911_7 Belongs to the MtfA family K09933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005483 266.0
BYD1_k127_7515911_8 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000008746 130.0
BYD1_k127_7515911_9 Tetratricopeptide repeat - - - 0.0000000000000000000000000003519 125.0
BYD1_k127_7522562_0 AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.0 1019.0
BYD1_k127_7522562_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004809 590.0
BYD1_k127_7522562_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001517 540.0
BYD1_k127_7522562_3 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003409 481.0
BYD1_k127_7522562_4 ABC transporter K06158 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008675 350.0
BYD1_k127_7522562_5 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 311.0
BYD1_k127_7522562_6 - - - - 0.00000000000000000000000000000000000000000007966 164.0
BYD1_k127_7583622_0 ATP-dependent DNA helicase RecQ K03654 - 3.6.4.12 2.483e-287 894.0
BYD1_k127_7583622_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.97e-267 829.0
BYD1_k127_7583622_10 COG3170 Tfp pilus assembly protein FimV K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 548.0
BYD1_k127_7583622_11 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000119 523.0
BYD1_k127_7583622_12 COG2202 FOG PAS PAC domain K03776 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004985 524.0
BYD1_k127_7583622_13 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007054 490.0
BYD1_k127_7583622_14 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 493.0
BYD1_k127_7583622_15 May be involved in the transport of PQQ or its precursor to the periplasm - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 459.0
BYD1_k127_7583622_16 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002965 463.0
BYD1_k127_7583622_17 Papain family cysteine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001595 433.0
BYD1_k127_7583622_18 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 386.0
BYD1_k127_7583622_19 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 346.0
BYD1_k127_7583622_2 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 2.443e-236 733.0
BYD1_k127_7583622_20 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005256 342.0
BYD1_k127_7583622_21 Heat shock 70 kDa protein K04043 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 285.0
BYD1_k127_7583622_22 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007817 278.0
BYD1_k127_7583622_23 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000002122 266.0
BYD1_k127_7583622_24 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K01802,K03767 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000005157 258.0
BYD1_k127_7583622_25 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000000000000000000000005711 256.0
BYD1_k127_7583622_26 Diguanylate cyclase K13069,K21021 GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0052621 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000002454 255.0
BYD1_k127_7583622_27 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000007249 237.0
BYD1_k127_7583622_28 colicin V production K03558 - - 0.00000000000000000000000000000000000000000006347 171.0
BYD1_k127_7583622_29 Sporulation related domain K03749 - - 0.00000000000000000000000000000000000000000009579 168.0
BYD1_k127_7583622_3 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 4.642e-234 731.0
BYD1_k127_7583622_30 Domain of unknown function (DUF4405) - - - 0.0000000000000000000000000008178 123.0
BYD1_k127_7583622_31 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.0000000000000003667 78.0
BYD1_k127_7583622_32 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates - - - 0.00000000004715 71.0
BYD1_k127_7583622_33 - - - - 0.00000002481 63.0
BYD1_k127_7583622_34 serine-type aminopeptidase activity K02030,K14475 - - 0.0000000576 60.0
BYD1_k127_7583622_4 peptidase - - - 1.52e-212 676.0
BYD1_k127_7583622_5 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004371 608.0
BYD1_k127_7583622_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005913 603.0
BYD1_k127_7583622_7 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K10764 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004657 592.0
BYD1_k127_7583622_8 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001385 560.0
BYD1_k127_7583622_9 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008318 539.0
BYD1_k127_7598507_0 Molybdopterin oxidoreductase Fe4S4 domain K02567 - - 0.0 1487.0
BYD1_k127_7598507_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1011.0
BYD1_k127_7598507_10 TIGRFAM ferredoxin-type protein, NapH MauN family K02574 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 412.0
BYD1_k127_7598507_11 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 391.0
BYD1_k127_7598507_12 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009402 374.0
BYD1_k127_7598507_13 Stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002173 343.0
BYD1_k127_7598507_14 Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 335.0
BYD1_k127_7598507_15 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002324 336.0
BYD1_k127_7598507_16 cytochrome c-type protein K02569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009273 302.0
BYD1_k127_7598507_17 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000464 307.0
BYD1_k127_7598507_18 Cytochrome c-type biogenesis protein K02200 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006497 308.0
BYD1_k127_7598507_19 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003263 293.0
BYD1_k127_7598507_2 Cytochrome c K02198 - - 8.081e-304 948.0
BYD1_k127_7598507_20 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004506 276.0
BYD1_k127_7598507_21 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000009326 243.0
BYD1_k127_7598507_22 oxidoreductase DsbE K02199 - - 0.000000000000000000000000000000000000000000000000000000000000000000001825 253.0
BYD1_k127_7598507_23 helix_turn_helix, Lux Regulon K07684 - - 0.000000000000000000000000000000000000000000000000000000000000000000002331 241.0
BYD1_k127_7598507_24 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.00000000000000000000000000000000000000000000000000000000000000002533 225.0
BYD1_k127_7598507_25 Crp Fnr family transcriptional regulator K21563 - - 0.000000000000000000000000000000000000000000000000000009816 199.0
BYD1_k127_7598507_26 subunit of a heme lyase K02200 - - 0.0000000000000000000000000000000000000000000000000001208 191.0
BYD1_k127_7598507_27 pathogenesis - - - 0.00000000000000000000000000000000001688 144.0
BYD1_k127_7598507_28 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.0000000000000000000000000000000005955 136.0
BYD1_k127_7598507_29 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.00000000000000000000000003163 108.0
BYD1_k127_7598507_3 Cytochrome c554 and c-prime - - - 5.146e-268 831.0
BYD1_k127_7598507_30 PFAM cytochrome c class I K08738 - - 0.000000000000000000000000346 110.0
BYD1_k127_7598507_31 COG2104 Sulfur transfer protein involved in thiamine biosynthesis K03154 - - 0.0000000000000000005756 94.0
BYD1_k127_7598507_32 Protein of unknown function (DUF3460) - - - 0.0000000000000000009299 94.0
BYD1_k127_7598507_33 - - - - 0.000000000000000008765 94.0
BYD1_k127_7598507_34 NapD protein K02570 - - 0.00000000000000002367 85.0
BYD1_k127_7598507_35 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 - - 0.000000000000004737 76.0
BYD1_k127_7598507_37 Protein of unknown function (DUF2917) - - - 0.00001166 59.0
BYD1_k127_7598507_4 Transcriptional regulator with HTH domain and aminotransferase domain containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 567.0
BYD1_k127_7598507_5 Catalyzes the rearrangement of 1-deoxy-D-xylulose 5- phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S K03149 - 2.8.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002366 448.0
BYD1_k127_7598507_6 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006564 446.0
BYD1_k127_7598507_7 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 451.0
BYD1_k127_7598507_8 serine threonine protein kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008472 441.0
BYD1_k127_7598507_9 4Fe-4S dicluster domain K02573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008495 431.0
BYD1_k127_7599213_0 Belongs to the CarA family K01956 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001438 587.0
BYD1_k127_7599213_1 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 514.0
BYD1_k127_7599213_2 Belongs to the CarB family K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002052 385.0
BYD1_k127_7599213_3 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004662 347.0
BYD1_k127_7599213_4 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000002349 226.0
BYD1_k127_7599213_5 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000000000000000000501 127.0
BYD1_k127_7620251_0 Elongator protein 3, MiaB family, Radical SAM - - - 2.126e-266 829.0
BYD1_k127_7620251_1 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 1.133e-260 846.0
BYD1_k127_7620251_10 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001064 282.0
BYD1_k127_7620251_11 VanZ like family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001815 278.0
BYD1_k127_7620251_12 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000005204 241.0
BYD1_k127_7620251_13 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000008012 199.0
BYD1_k127_7620251_14 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000000000000007388 198.0
BYD1_k127_7620251_15 Belongs to the CinA family K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000007393 181.0
BYD1_k127_7620251_16 lipid carrier protein - - - 0.000000000000000000000000000000000000000000001914 183.0
BYD1_k127_7620251_17 Ferredoxin - - - 0.000000000000000000000000000000000000000000008311 164.0
BYD1_k127_7620251_18 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000001143 170.0
BYD1_k127_7620251_19 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000000000000000000000007183 158.0
BYD1_k127_7620251_2 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 7.525e-227 718.0
BYD1_k127_7620251_20 Nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000004834 142.0
BYD1_k127_7620251_21 response to cobalt ion - - - 0.000000000000000000000000000000000002812 143.0
BYD1_k127_7620251_22 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00007062 45.0
BYD1_k127_7620251_3 Peptidase U32 K08303 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002523 577.0
BYD1_k127_7620251_4 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001897 548.0
BYD1_k127_7620251_5 response regulator receiver K07814 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004796 510.0
BYD1_k127_7620251_6 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001889 389.0
BYD1_k127_7620251_7 Peptidase family U32 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 356.0
BYD1_k127_7620251_8 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004596 347.0
BYD1_k127_7620251_9 ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006442 342.0
BYD1_k127_7622983_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.52e-310 956.0
BYD1_k127_7622983_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 1.9e-228 719.0
BYD1_k127_7622983_2 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K00850,K21071 - 2.7.1.11,2.7.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 598.0
BYD1_k127_7622983_3 Belongs to the KdsA family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000393 473.0
BYD1_k127_7622983_4 GTP cyclohydrolase I K01495 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001968 352.0
BYD1_k127_7622983_5 MgtC family K07507 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 355.0
BYD1_k127_7622983_6 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000852 261.0
BYD1_k127_7622983_7 Thioredoxin K05838 - - 0.0000000000000000000000000000000000000000000000000243 182.0
BYD1_k127_7622983_8 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.0000000000000000000000000000000000005784 148.0
BYD1_k127_7622983_9 Domain of unknown function (DUF1330) - - - 0.000000000000000000001113 108.0
BYD1_k127_7664415_0 Histidine kinase - - - 5.91e-241 785.0
BYD1_k127_7664415_1 Cytochrome c bacterial - - - 7.293e-233 732.0
BYD1_k127_7664415_10 PFAM Patatin K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006373 325.0
BYD1_k127_7664415_11 4fe-4S ferredoxin, iron-sulfur binding domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001194 309.0
BYD1_k127_7664415_12 cell redox homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 288.0
BYD1_k127_7664415_13 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000014 277.0
BYD1_k127_7664415_14 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003401 254.0
BYD1_k127_7664415_15 Patatin-like phospholipase K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000007193 244.0
BYD1_k127_7664415_17 COG0642 Signal transduction histidine kinase - - - 0.000000000000000004218 84.0
BYD1_k127_7664415_2 - K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008747 552.0
BYD1_k127_7664415_3 Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress K05916,K07006,K21832 - 1.14.12.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 500.0
BYD1_k127_7664415_4 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 478.0
BYD1_k127_7664415_5 thiosulfate sulfurtransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009756 459.0
BYD1_k127_7664415_6 chorismate binding enzyme K01665,K03342 - 2.6.1.85,4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 460.0
BYD1_k127_7664415_7 Class III cytochrome C family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009498 353.0
BYD1_k127_7664415_8 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 336.0
BYD1_k127_7664415_9 HD domain K07814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 339.0
BYD1_k127_770395_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1371.0
BYD1_k127_770395_1 cation transport ATPase K01533 - 3.6.3.4 5e-324 1011.0
BYD1_k127_770395_10 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 450.0
BYD1_k127_770395_11 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 389.0
BYD1_k127_770395_12 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006395 371.0
BYD1_k127_770395_13 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003103 340.0
BYD1_k127_770395_14 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007665 309.0
BYD1_k127_770395_15 2Fe-2S iron-sulfur cluster binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000003156 242.0
BYD1_k127_770395_16 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000000000000000000000000000004421 196.0
BYD1_k127_770395_17 Pilus assembly protein PilX - - - 0.000000000000000000000000000000000000000000000000002261 190.0
BYD1_k127_770395_18 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.0000000000000000000000000000000000000000000000001057 187.0
BYD1_k127_770395_19 Peptidyl-prolyl cis-trans K03774 - 5.2.1.8 0.000000000000000000000000000000000000000000000006515 175.0
BYD1_k127_770395_2 Tfp pilus assembly protein, tip-associated adhesin PilY1 K02674 - - 2.807e-270 875.0
BYD1_k127_770395_20 Type II transport protein GspH K08084 - - 0.0000000000000000000000000000000000000000000005593 179.0
BYD1_k127_770395_21 Type IV minor pilin ComP, DNA uptake sequence receptor K02655 - - 0.0000000000000000000000000000000000001106 146.0
BYD1_k127_770395_22 type IV pilus modification protein PilV K02671 - - 0.000000000000000000000000002003 115.0
BYD1_k127_770395_23 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000001566 96.0
BYD1_k127_770395_24 Cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000000007161 87.0
BYD1_k127_770395_25 - K03832 - - 0.000000000000000007209 92.0
BYD1_k127_770395_3 Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate K08289 - 2.1.2.2 2.072e-205 644.0
BYD1_k127_770395_4 FAD binding domain K00239,K00278 - 1.3.5.1,1.3.5.4,1.4.3.16 6.546e-197 627.0
BYD1_k127_770395_5 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 551.0
BYD1_k127_770395_6 N-acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009067 559.0
BYD1_k127_770395_7 Pyruvate flavodoxin ferredoxin oxidoreductase domain protein K00174 - 1.2.7.11,1.2.7.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 531.0
BYD1_k127_770395_8 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region K00335 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 522.0
BYD1_k127_770395_9 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006159 470.0
BYD1_k127_7853680_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.126e-269 836.0
BYD1_k127_7853680_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001035 403.0
BYD1_k127_7853680_2 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 - 4.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 366.0
BYD1_k127_7853680_3 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.0000000000000000000000000000000000000000000000000000000000000001571 224.0
BYD1_k127_7853680_4 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000003098 224.0
BYD1_k127_7853680_5 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.00000000000000000000000000000000006255 135.0
BYD1_k127_7853680_6 Predicted membrane protein (DUF2069) - - - 0.00000000000000000000000000000000008088 138.0
BYD1_k127_7853680_7 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.0000000000000000000000008695 107.0
BYD1_k127_7854185_0 COG0798 Arsenite efflux pump ACR3 and related permeases K03325 - - 4.613e-194 610.0
BYD1_k127_7854185_1 Predicted permease K07089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002758 522.0
BYD1_k127_7854185_10 - - - - 0.0000000000000000000000004553 111.0
BYD1_k127_7854185_11 SlyX K03745 - - 0.00000000000000004606 86.0
BYD1_k127_7854185_13 peroxiredoxin activity K01607 - 4.1.1.44 0.000000000003047 70.0
BYD1_k127_7854185_2 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003682 493.0
BYD1_k127_7854185_3 Thioredoxin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001569 349.0
BYD1_k127_7854185_4 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000003093 233.0
BYD1_k127_7854185_5 Low molecular weight phosphatase family K03741 - 1.20.4.1 0.000000000000000000000000000000000000000000000000000000000000000002682 234.0
BYD1_k127_7854185_6 transcriptional regulators K03892 - - 0.00000000000000000000000000000000003879 137.0
BYD1_k127_7854185_7 Thioredoxin domain - - - 0.000000000000000000000000000000002764 129.0
BYD1_k127_7854185_8 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000004331 119.0
BYD1_k127_7854185_9 cytochrome - - - 0.000000000000000000000000002423 118.0
BYD1_k127_7875979_0 Belongs to the aconitase IPM isomerase family K01682 - 4.2.1.3,4.2.1.99 0.0 1468.0
BYD1_k127_7875979_1 COG2804 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 0.0 1087.0
BYD1_k127_7875979_10 von Willebrand factor, type A K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004243 584.0
BYD1_k127_7875979_11 Catalyzes the reversible oxidation of malate to oxaloacetate K00016,K00024 GO:0003674,GO:0003824,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 1.1.1.27,1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002049 521.0
BYD1_k127_7875979_12 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008179 514.0
BYD1_k127_7875979_13 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 461.0
BYD1_k127_7875979_14 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001206 460.0
BYD1_k127_7875979_15 Histidine kinase K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004428 435.0
BYD1_k127_7875979_16 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 418.0
BYD1_k127_7875979_17 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 420.0
BYD1_k127_7875979_18 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006459 424.0
BYD1_k127_7875979_19 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 379.0
BYD1_k127_7875979_2 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 1.783e-310 962.0
BYD1_k127_7875979_20 Glycosyl transferase family 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 364.0
BYD1_k127_7875979_21 Histidine kinase K07641 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 363.0
BYD1_k127_7875979_22 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002656 351.0
BYD1_k127_7875979_23 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 339.0
BYD1_k127_7875979_24 ADP-ribosylation factor family K06883 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006957 315.0
BYD1_k127_7875979_25 uracil-DNA glycosylase K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000084 324.0
BYD1_k127_7875979_26 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001621 269.0
BYD1_k127_7875979_27 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003267 257.0
BYD1_k127_7875979_28 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003779 240.0
BYD1_k127_7875979_29 Peptidase M22 glycoprotease K14742 - - 0.00000000000000000000000000000000000000000000000000000000002504 212.0
BYD1_k127_7875979_3 ABC transporter K15738 - - 1.264e-282 880.0
BYD1_k127_7875979_30 Pfam:TPM - - - 0.000000000000000000000000000000000000000000000000000000151 201.0
BYD1_k127_7875979_31 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000000000000000000000000355 184.0
BYD1_k127_7875979_32 Bacterial-like globin K06886 - - 0.00000000000000000000000000000000000000000000628 183.0
BYD1_k127_7875979_33 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.00000000000000000000000000000000000000000002678 171.0
BYD1_k127_7875979_34 Belongs to the SOS response-associated peptidase family - - - 0.00000000000000000000000000000000000000000004426 161.0
BYD1_k127_7875979_35 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000000000000000000000003719 157.0
BYD1_k127_7875979_36 TonB C terminal - - - 0.00000000000000000000000000000000000003333 164.0
BYD1_k127_7875979_37 HicA toxin of bacterial toxin-antitoxin, - - - 0.0000000000000000000000000000000000003779 141.0
BYD1_k127_7875979_39 - - - - 0.000000000000003447 89.0
BYD1_k127_7875979_4 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 9.63e-259 824.0
BYD1_k127_7875979_40 - - - - 0.000000000000008076 77.0
BYD1_k127_7875979_41 Histidine kinase - - - 0.0000002161 64.0
BYD1_k127_7875979_5 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 8.61e-225 705.0
BYD1_k127_7875979_6 Major Facilitator - - - 4.303e-211 662.0
BYD1_k127_7875979_7 chemotaxis K03406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008225 613.0
BYD1_k127_7875979_8 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 621.0
BYD1_k127_7875979_9 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003173 595.0
BYD1_k127_7876144_0 domain, Protein - - - 1.195e-233 738.0
BYD1_k127_7876144_1 COG1613 ABC-type sulfate transport system, periplasmic component K02048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 537.0
BYD1_k127_7876144_10 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003818 316.0
BYD1_k127_7876144_11 Belongs to the heme-copper respiratory oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 313.0
BYD1_k127_7876144_12 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001732 270.0
BYD1_k127_7876144_13 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002555 269.0
BYD1_k127_7876144_14 Crp Fnr family transcriptional regulator K21563 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003959 271.0
BYD1_k127_7876144_15 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000001405 212.0
BYD1_k127_7876144_16 periplasmic or secreted lipoprotein - - - 0.00000000000000000000000000000000000000000000000000000001697 207.0
BYD1_k127_7876144_17 DsrC like protein K11179 - - 0.00000000000000000000000000000000000000000005894 165.0
BYD1_k127_7876144_18 HIRAN - - - 0.0000000000000000000000000000000000000007075 154.0
BYD1_k127_7876144_19 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000001264 149.0
BYD1_k127_7876144_2 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001929 518.0
BYD1_k127_7876144_20 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000006084 142.0
BYD1_k127_7876144_21 Uncharacterised protein family UPF0102 K07460 - - 0.0000000000000000000000000000007495 136.0
BYD1_k127_7876144_22 redox protein, regulator of disulfide bond formation - - - 0.00000009113 64.0
BYD1_k127_7876144_3 Major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006865 490.0
BYD1_k127_7876144_4 Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system K02045 - 3.6.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 458.0
BYD1_k127_7876144_5 Sulfate ABC transporter inner membrane subunit CysW K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000375 429.0
BYD1_k127_7876144_6 sulfate transport system, permease K02046,K15496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007416 417.0
BYD1_k127_7876144_7 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 422.0
BYD1_k127_7876144_8 Transcriptional regulator K13635 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001054 415.0
BYD1_k127_7876144_9 crp fnr family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 312.0
BYD1_k127_7958890_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281 - 1.4.4.2 0.0 1463.0
BYD1_k127_7958890_1 Glycine cleavage system regulatory protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002615 238.0
BYD1_k127_7958890_2 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 0.00000000000000000000000000000000000001038 149.0
BYD1_k127_7958890_3 Biotin-requiring enzyme - - - 0.00000000000000000001013 101.0
BYD1_k127_796578_0 Major facilitator Superfamily K08218 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015078,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015672,GO:0015835,GO:0016020,GO:0016021,GO:0022804,GO:0022857,GO:0022890,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071944,GO:0098655,GO:0098660,GO:0098662,GO:1901264,GO:1902600 - 3.667e-196 632.0
BYD1_k127_796578_1 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007505 572.0
BYD1_k127_796578_10 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004754 318.0
BYD1_k127_796578_11 Forkhead associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001837 309.0
BYD1_k127_796578_12 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP K19221 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 287.0
BYD1_k127_796578_13 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001444 254.0
BYD1_k127_796578_14 Pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000765 257.0
BYD1_k127_796578_15 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.00000000000000000000000000000000000000000000000000000000000000001006 228.0
BYD1_k127_796578_16 ABC-type (Unclassified) transport system, ATPase component K06861 - - 0.000000000000000000000000000000000000000000000000000000000000006389 218.0
BYD1_k127_796578_17 sigma 54 modulation protein K05808 - - 0.0000000000000000000000000000000000000000008153 158.0
BYD1_k127_796578_18 Cobyrinic acid ac-diamide synthase K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000003332 138.0
BYD1_k127_796578_19 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000001916 108.0
BYD1_k127_796578_2 PFAM Aminotransferase, class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007155 561.0
BYD1_k127_796578_20 PFAM PsiF repeat protein - - - 0.000000000000000000001888 97.0
BYD1_k127_796578_21 - K09892 - - 0.00000142 52.0
BYD1_k127_796578_3 TonB dependent receptor K16092 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001582 500.0
BYD1_k127_796578_4 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 442.0
BYD1_k127_796578_5 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002132 445.0
BYD1_k127_796578_6 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 424.0
BYD1_k127_796578_7 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005189 411.0
BYD1_k127_796578_8 membrane transporter protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008753 358.0
BYD1_k127_796578_9 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 K22132 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002104 319.0
BYD1_k127_7980981_0 B12 binding domain - - - 3.202e-299 930.0
BYD1_k127_7980981_1 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 5.747e-284 879.0
BYD1_k127_7980981_10 NMT1-like family K07080 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001751 270.0
BYD1_k127_7980981_11 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007248 263.0
BYD1_k127_7980981_12 Response regulator receiver domain protein K14979 - - 0.000000000000000000000000000000000000000000000000000000000000007621 227.0
BYD1_k127_7980981_13 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00000000000000000000000000000000000000000000000000000000000002075 237.0
BYD1_k127_7980981_14 PFAM CBS domain containing protein K07168 - - 0.000000000000000000000000000000000000002274 157.0
BYD1_k127_7980981_15 helix_turn_helix, Lux Regulon - - - 0.0000006137 57.0
BYD1_k127_7980981_16 Double zinc ribbon - - - 0.000011 58.0
BYD1_k127_7980981_2 Cysteine-rich domain - - - 3.44e-259 806.0
BYD1_k127_7980981_3 Beta-lactamase - - - 2.905e-243 765.0
BYD1_k127_7980981_4 Tryptophan halogenase - - - 6.677e-215 672.0
BYD1_k127_7980981_5 Integral membrane sensor signal transduction histidine kinase K02480 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007997 472.0
BYD1_k127_7980981_6 LysR substrate binding domain K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003261 387.0
BYD1_k127_7980981_7 phospholipase K01058 - 3.1.1.32,3.1.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 346.0
BYD1_k127_7980981_8 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003922 277.0
BYD1_k127_7980981_9 Belongs to the Dps family K04047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001371 280.0
BYD1_k127_7987962_0 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 1.151e-202 642.0
BYD1_k127_7987962_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006367 505.0
BYD1_k127_7987962_2 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001676 321.0
BYD1_k127_7987962_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000385 313.0
BYD1_k127_7987962_4 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000000000000000003328 174.0
BYD1_k127_7987962_5 LTXXQ motif family protein - - - 0.00000000000000824 83.0
BYD1_k127_8043269_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1524.0
BYD1_k127_8043269_1 tRNA synthetases class I (E and Q), anti-codon binding domain K01886 - 6.1.1.18 4.523e-301 931.0
BYD1_k127_8043269_10 Molybdopterin binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001558 286.0
BYD1_k127_8043269_11 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006748 272.0
BYD1_k127_8043269_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000002766 231.0
BYD1_k127_8043269_13 Outer membrane lipoprotein-sorting protein - - - 0.000000000000000000000000000000000000000000000000000000000000002428 227.0
BYD1_k127_8043269_14 - - - - 0.00000000000000000000000000000000000000000000000000001098 208.0
BYD1_k127_8043269_15 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000007157 188.0
BYD1_k127_8043269_16 Etoposide-induced protein 2.4 (EI24) - - - 0.0000000000000000000000000000000000000000000734 169.0
BYD1_k127_8043269_17 Phosphopantetheine attachment site K02078 - - 0.000000000000000000000000000007256 131.0
BYD1_k127_8043269_2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 610.0
BYD1_k127_8043269_3 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004283 557.0
BYD1_k127_8043269_4 Domain of unknown function (DUF4872) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 518.0
BYD1_k127_8043269_5 Beta-ketoacyl synthase, C-terminal domain K00647 - 2.3.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 412.0
BYD1_k127_8043269_6 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 372.0
BYD1_k127_8043269_7 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 352.0
BYD1_k127_8043269_8 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001475 335.0
BYD1_k127_8043269_9 FMN binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 317.0
BYD1_k127_8044263_0 COG0643 Chemotaxis protein histidine kinase and related kinases K02487,K06596 - - 0.0 1348.0
BYD1_k127_8044263_1 Methyl-accepting chemotaxis protein K02660 - - 8.687e-203 653.0
BYD1_k127_8044263_2 COG0044 Dihydroorotase and related cyclic amidohydrolases K01465 - 3.5.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000546 578.0
BYD1_k127_8044263_3 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 536.0
BYD1_k127_8044263_4 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 369.0
BYD1_k127_8044263_5 Belongs to the UPF0301 (AlgH) family K07735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000514 279.0
BYD1_k127_8044263_6 PFAM CheW domain protein K02659 - - 0.0000000000000000000000000000000000000000000000000000000001825 207.0
BYD1_k127_8044263_7 RESPONSE REGULATOR receiver K02658 - - 0.00000000000000000000000000000000000000000000000000001011 190.0
BYD1_k127_8044263_8 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000002383 191.0
BYD1_k127_8044263_9 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000003427 171.0
BYD1_k127_8090793_0 Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin K03737 - 1.2.7.1 0.0 2511.0
BYD1_k127_8090793_1 Putative outer membrane beta-barrel porin, MtrB/PioB - - - 2.536e-252 801.0
BYD1_k127_8090793_10 Fe-S cluster K03616 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009752 417.0
BYD1_k127_8090793_11 ATPase (AAA K06923 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003318 394.0
BYD1_k127_8090793_12 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003684 356.0
BYD1_k127_8090793_13 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 321.0
BYD1_k127_8090793_14 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002267 303.0
BYD1_k127_8090793_15 COG3221 ABC-type phosphate phosphonate transport system, periplasmic component K02044 - - 0.00000000000000000000000000000000000000000000000000000000000000001046 234.0
BYD1_k127_8090793_16 Part of a membrane complex involved in electron transport K03612 - - 0.00000000000000000000000000000000000000000000000001219 188.0
BYD1_k127_8090793_17 Cytochrome c K08738 - - 0.00000000000000000000000000000008961 130.0
BYD1_k127_8090793_18 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.0000000000000001098 82.0
BYD1_k127_8090793_19 - - - - 0.000001669 58.0
BYD1_k127_8090793_2 Cytochrome c554 and c-prime - - - 3.646e-251 788.0
BYD1_k127_8090793_3 Part of a membrane complex involved in electron transport K03615 - - 4.258e-219 707.0
BYD1_k127_8090793_4 COG1055 Na H antiporter NhaD and related arsenite permeases - - - 4.632e-219 685.0
BYD1_k127_8090793_5 Part of a membrane complex involved in electron transport K03614 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001446 600.0
BYD1_k127_8090793_6 PFAM sigma-54 factor interaction domain-containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001386 551.0
BYD1_k127_8090793_7 TIGRFAM decaheme c-type cytochrome, DmsE family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009504 459.0
BYD1_k127_8090793_8 Membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 461.0
BYD1_k127_8090793_9 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001995 458.0
BYD1_k127_8096077_0 Phosphoglycerate kinase K00927 - 2.7.2.3 6.677e-220 689.0
BYD1_k127_8096077_1 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 7.968e-217 688.0
BYD1_k127_8096077_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 7.729e-194 607.0
BYD1_k127_8096077_3 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 346.0
BYD1_k127_8096077_4 Fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 0.0000000000000000000001471 97.0
BYD1_k127_8113810_0 PFAM Hemolysin-type calcium-binding - - - 1.041e-320 1005.0
BYD1_k127_8113810_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 2.368e-285 893.0
BYD1_k127_8113810_10 Heavy metal-associated domain protein K07213 - - 0.0000000000000001035 86.0
BYD1_k127_8113810_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 6.739e-243 764.0
BYD1_k127_8113810_3 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 342.0
BYD1_k127_8113810_4 type I secretion membrane fusion K02022,K12537 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002156 293.0
BYD1_k127_8113810_5 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001909 267.0
BYD1_k127_8113810_6 Bacterial regulatory proteins, crp family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002485 251.0
BYD1_k127_8113810_7 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000000001218 205.0
BYD1_k127_8113810_8 Rhodanese-like domain - - - 0.000000000000000000000000000000002343 132.0
BYD1_k127_8113810_9 Elongator protein 3, MiaB family, Radical SAM - - - 0.0000000000000000000000000000766 116.0
BYD1_k127_8121066_0 DNA topoisomerase III K03169 - 5.99.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 419.0
BYD1_k127_8121066_1 Voltage-dependent anion channel K03304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003344 395.0
BYD1_k127_8121066_2 - - - - 0.0000000000000000000007158 104.0
BYD1_k127_8121066_3 Lysin motif - - - 0.000000000004375 78.0
BYD1_k127_8128973_0 TRAP transporter 4TM 12TM fusion - - - 7.816e-274 853.0
BYD1_k127_8128973_1 recombinase XerD K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 376.0
BYD1_k127_8128973_10 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.000000000000000000000000000000003312 144.0
BYD1_k127_8128973_11 Transcriptional regulator K13634 - - 0.00000000000000001131 83.0
BYD1_k127_8128973_2 Bacterial protein of unknown function (DUF898) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007432 373.0
BYD1_k127_8128973_3 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 339.0
BYD1_k127_8128973_4 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002227 336.0
BYD1_k127_8128973_5 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001815 270.0
BYD1_k127_8128973_6 Hemerythrin HHE cation binding domain K07216 - - 0.00000000000000000000000000000000000000000000000000000000000006868 216.0
BYD1_k127_8128973_7 COG0350 Methylated DNA-protein cysteine methyltransferase K00567 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000001028 213.0
BYD1_k127_8128973_8 Peptidase C14 caspase catalytic subunit p20 - - - 0.0000000000000000000000000000000000000000000000000000002153 206.0
BYD1_k127_8128973_9 Domain of unknown function (DUF1850) - - - 0.000000000000000000000000000000000000000005838 162.0
BYD1_k127_8250540_0 Fe-S oxidoreductase K21834 - - 2.716e-223 694.0
BYD1_k127_8250540_1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 608.0
BYD1_k127_8331045_0 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 405.0
BYD1_k127_8331045_1 PFAM MaoC domain protein dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000006321 220.0
BYD1_k127_8331045_2 - - - - 0.000000000000000000000000000000000000000000000000000006451 206.0
BYD1_k127_8331045_3 Transcriptional regulator - - - 0.00000000000000000000000000000000000006687 145.0
BYD1_k127_8331045_4 Belongs to the UPF0386 family K09982 GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0010911,GO:0019899,GO:0044547,GO:0050790,GO:0065007,GO:0065009 - 0.000000000000004503 88.0
BYD1_k127_8385534_0 Aminotransferase K00832 - 2.6.1.57 1.393e-206 647.0
BYD1_k127_8385534_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007489 403.0
BYD1_k127_8385534_2 With GlrK is part of a two-component signal transduction system regulating glmY K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 404.0
BYD1_k127_8385534_3 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001641 300.0
BYD1_k127_8385534_4 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000000000007814 245.0
BYD1_k127_8385534_5 AsmA-like C-terminal region - - - 0.000000000000000000000000000000000000000000000000000000002631 222.0
BYD1_k127_8385534_6 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000005428 135.0
BYD1_k127_8385534_7 (ABC) transporter - - - 0.000003496 57.0
BYD1_k127_839356_0 TRAP dicarboxylate transporter, DctM subunit K03299 - - 2.177e-257 816.0
BYD1_k127_839356_1 Iron-sulfur cluster binding protein K18929 - - 5.025e-216 692.0
BYD1_k127_839356_10 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.000000000000000000000000000000000000004061 149.0
BYD1_k127_839356_11 LUD domain K00782 - - 0.00000000000000000000000000000000000002441 154.0
BYD1_k127_839356_12 PFAM Cold-shock protein, DNA-binding K03704 - - 0.000000000000000000000000000000007297 130.0
BYD1_k127_839356_2 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001762 591.0
BYD1_k127_839356_3 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005789 412.0
BYD1_k127_839356_4 Fe-S oxidoreductase K18928 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008166 349.0
BYD1_k127_839356_5 Tripartite ATP-independent periplasmic transporter DctQ - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000162 262.0
BYD1_k127_839356_6 Lysine methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007654 254.0
BYD1_k127_839356_7 COG2186 Transcriptional regulators K05799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000008724 250.0
BYD1_k127_839356_8 Phosphoglycerate mutase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000879 252.0
BYD1_k127_839356_9 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000002842 241.0
BYD1_k127_8425713_0 Poly-beta-hydroxybutyrate K03821 - - 8.42e-268 837.0
BYD1_k127_8425713_1 Cytochrome C oxidase accessory protein - - - 9.79e-207 654.0
BYD1_k127_8425713_10 Protein of unknown function (DUF3149) - - - 0.00000000001078 66.0
BYD1_k127_8425713_2 Cytochrome C and Quinol oxidase polypeptide I K00404 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 417.0
BYD1_k127_8425713_3 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 389.0
BYD1_k127_8425713_4 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000872 319.0
BYD1_k127_8425713_5 2-Nitropropane dioxygenase K00459 - 1.13.12.16 0.00000000000000000000000000000000000000000000000000000000000000000008505 232.0
BYD1_k127_8425713_6 Universal stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000002309 217.0
BYD1_k127_8425713_7 universal stress protein - - - 0.000000000000000000000000000000000000000000001875 171.0
BYD1_k127_8425713_8 FixH K09926 - - 0.000000000000000000000000000000000005085 143.0
BYD1_k127_8425713_9 COG4736 Cbb3-type cytochrome oxidase, subunit 3 K00407 - - 0.0000000000004189 71.0
BYD1_k127_8497788_0 Cytochrome c554 and c-prime - - - 6.205e-281 876.0
BYD1_k127_8497788_1 diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008667 329.0
BYD1_k127_8497788_2 Flavodoxin domain K00230 - 1.3.5.3 0.00000000000000000000000000000000000000000000000002541 199.0
BYD1_k127_8497788_3 bacterial (prokaryotic) histone like domain K03530 - - 0.0000000000000000000000000000000001947 140.0
BYD1_k127_8497788_4 - - - - 0.000000000000000000000000008354 116.0
BYD1_k127_8497788_5 PFAM Excinuclease ABC, C subunit domain protein K07461 - - 0.00000000000000000002275 99.0
BYD1_k127_8560751_0 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 1.346e-301 931.0
BYD1_k127_8560751_1 cofactor biosynthesis protein NifB K02585 - - 3.059e-219 688.0
BYD1_k127_8560751_2 hydratase decarboxylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 298.0
BYD1_k127_8560751_3 Transcriptional regulator K03719 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004096 261.0
BYD1_k127_8560751_4 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000004843 189.0
BYD1_k127_8560751_5 Pyridoxamine 5'-phosphate oxidase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000001269 181.0
BYD1_k127_8560751_6 pyridoxamine 5-phosphate - - - 0.000000000000000000000000000003459 125.0
BYD1_k127_8566872_0 belongs to the aldehyde dehydrogenase family K00138 - - 7.871e-314 964.0
BYD1_k127_8566872_1 Transcriptional activator of acetoin glycerol metabolism K21405 - - 2.321e-251 792.0
BYD1_k127_8566872_2 Protein of unknown function (DUF779) K09959 - - 0.0000000000000000000000000000000000000000000000009851 179.0
BYD1_k127_8566872_3 Hemerythrin HHE cation binding domain - - - 0.00007137 51.0
BYD1_k127_8596168_0 TonB dependent receptor K02014 - - 0.0 1111.0
BYD1_k127_8596168_1 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 3.962e-221 724.0
BYD1_k127_8596168_2 Belongs to the cytochrome P450 family - - - 1.285e-212 667.0
BYD1_k127_8596168_3 Reductase C-terminal K00529 - 1.18.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159 539.0
BYD1_k127_8596168_4 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 457.0
BYD1_k127_8596168_5 belongs to the aldehyde dehydrogenase family K21802 - 1.2.1.67 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005015 370.0
BYD1_k127_8596168_6 belongs to the aldehyde dehydrogenase family K21802 - 1.2.1.67 0.00000000000000000000000000000000000000000000000000000000000000000006772 234.0
BYD1_k127_8596168_8 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000000000000000000001247 149.0
BYD1_k127_8596168_9 AraC type K18954 - - 0.0000000000000000000000000503 112.0
BYD1_k127_8622368_0 COG1034 NADH dehydrogenase NADH ubiquinone oxidoreductase 75 kD subunit (chain G) K00336 - 1.6.5.3 0.0 1030.0
BYD1_k127_8622368_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 6.357e-248 771.0
BYD1_k127_8622368_10 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001784 336.0
BYD1_k127_8622368_11 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 314.0
BYD1_k127_8622368_12 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 295.0
BYD1_k127_8622368_13 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000125 285.0
BYD1_k127_8622368_14 COG1905 NADH ubiquinone oxidoreductase 24 kD subunit K00334 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001665 262.0
BYD1_k127_8622368_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000004333 212.0
BYD1_k127_8622368_16 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.0000000000000000000000000000000000000000000000004303 184.0
BYD1_k127_8622368_17 preprotein translocase K03075 - - 0.00000000000000000000000000000000000000005113 155.0
BYD1_k127_8622368_18 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000006876 108.0
BYD1_k127_8622368_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 4.34e-241 750.0
BYD1_k127_8622368_3 phosphate transport system K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 516.0
BYD1_k127_8622368_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000228 518.0
BYD1_k127_8622368_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002392 495.0
BYD1_k127_8622368_6 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 470.0
BYD1_k127_8622368_7 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000647 458.0
BYD1_k127_8622368_8 Glycosyltransferase Family 4 K00786 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 450.0
BYD1_k127_8622368_9 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 408.0
BYD1_k127_8707130_0 Elongator protein 3, MiaB family, Radical SAM - - - 4.467e-264 822.0
BYD1_k127_8707130_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 3.033e-261 818.0
BYD1_k127_8707130_10 AAA domain K07028 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 519.0
BYD1_k127_8707130_11 response regulator receiver K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003362 504.0
BYD1_k127_8707130_12 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11072 - 3.6.3.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007912 484.0
BYD1_k127_8707130_13 Binding-protein-dependent transport system inner membrane component K02054,K11071 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006092 397.0
BYD1_k127_8707130_14 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008558 383.0
BYD1_k127_8707130_15 Binding-protein-dependent transport system inner membrane component K11070 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 387.0
BYD1_k127_8707130_16 Peptidase family U32 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 365.0
BYD1_k127_8707130_17 AAA domain, putative AbiEii toxin, Type IV TA system K09695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000361 349.0
BYD1_k127_8707130_18 ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005046 342.0
BYD1_k127_8707130_19 Esterase PHB depolymerase K03932 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003308 338.0
BYD1_k127_8707130_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - 3.301e-241 753.0
BYD1_k127_8707130_20 LrgB-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 326.0
BYD1_k127_8707130_21 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005783 312.0
BYD1_k127_8707130_22 Domain of unknown function (DUF4398) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 304.0
BYD1_k127_8707130_23 riboflavin synthase, alpha K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003202 282.0
BYD1_k127_8707130_24 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005707 271.0
BYD1_k127_8707130_25 methionine synthase K00548 - 2.1.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000001477 249.0
BYD1_k127_8707130_26 hydrolase of the alpha beta superfamily K07018 - - 0.0000000000000000000000000000000000000000000000000000000000000000005413 242.0
BYD1_k127_8707130_27 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.000000000000000000000000000000000000000000000000000000000205 208.0
BYD1_k127_8707130_28 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000000000000000000000006428 202.0
BYD1_k127_8707130_29 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000000001611 192.0
BYD1_k127_8707130_3 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor region - - - 2.719e-240 790.0
BYD1_k127_8707130_30 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000000004388 188.0
BYD1_k127_8707130_31 lipid carrier protein - - - 0.00000000000000000000000000000000000000000000000359 180.0
BYD1_k127_8707130_32 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000000000000000002905 172.0
BYD1_k127_8707130_33 Ferredoxin - - - 0.0000000000000000000000000000000000000000000004833 168.0
BYD1_k127_8707130_34 protein involved in tolerance to divalent cations K03926 - - 0.0000000000000000000000000000000000000002919 151.0
BYD1_k127_8707130_35 cell division protein - - - 0.0000000000000000000000000000000000000005864 155.0
BYD1_k127_8707130_36 Nucleotide pyrophosphohydrolase - - - 0.000000000000000000000000000000000000003072 148.0
BYD1_k127_8707130_37 response to cobalt ion - - - 0.00000000000000000000000000000000000449 143.0
BYD1_k127_8707130_38 effector of murein hydrolase LrgA K06518 - - 0.00000000000000000000000000000001586 132.0
BYD1_k127_8707130_39 Domain of unknown function (DUF4398) - - - 0.0000000000000000000000000001978 120.0
BYD1_k127_8707130_4 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 2.427e-237 744.0
BYD1_k127_8707130_40 PIN domain - - - 0.00000000003403 64.0
BYD1_k127_8707130_5 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 2.127e-215 696.0
BYD1_k127_8707130_6 Peptidase U32 K08303 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000318 577.0
BYD1_k127_8707130_7 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007499 561.0
BYD1_k127_8707130_8 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002251 538.0
BYD1_k127_8707130_9 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009251 523.0
BYD1_k127_8752251_0 Multicopper oxidase - - - 0.0 1066.0
BYD1_k127_8752251_1 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.861e-278 860.0
BYD1_k127_8752251_10 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007224 334.0
BYD1_k127_8752251_11 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 306.0
BYD1_k127_8752251_12 Cobyrinic acid ac-diamide synthase K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000179 302.0
BYD1_k127_8752251_13 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000001332 214.0
BYD1_k127_8752251_14 Pilin (bacterial filament) K02650 - - 0.00000000000000000000000000000000000000000000000004045 183.0
BYD1_k127_8752251_2 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 2.762e-239 762.0
BYD1_k127_8752251_3 ABC-type Fe3 transport system, permease component K02011 - - 4.182e-226 717.0
BYD1_k127_8752251_4 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 1.608e-197 622.0
BYD1_k127_8752251_5 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002176 597.0
BYD1_k127_8752251_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 571.0
BYD1_k127_8752251_7 Belongs to the ABC transporter superfamily K02010 - 3.6.3.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 524.0
BYD1_k127_8752251_8 ABC-type Fe3 transport system, periplasmic component K02012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005672 497.0
BYD1_k127_8752251_9 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 346.0
BYD1_k127_877097_0 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00956 - 2.7.7.4 7.523e-200 640.0
BYD1_k127_877097_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 605.0
BYD1_k127_877097_10 dihydroneopterin aldolase K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000006666 173.0
BYD1_k127_877097_11 Phosphate-starvation-inducible E - - - 0.00000000000000000000000000001003 121.0
BYD1_k127_877097_12 Disulfide bond formation protein DsbB K03611 - - 0.000000000000000001979 91.0
BYD1_k127_877097_13 RNA-binding protein K14761 - - 0.0000000000000003762 84.0
BYD1_k127_877097_14 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000002348 65.0
BYD1_k127_877097_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 593.0
BYD1_k127_877097_3 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000414 509.0
BYD1_k127_877097_4 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K03472 - 1.2.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001964 479.0
BYD1_k127_877097_5 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 455.0
BYD1_k127_877097_6 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009205 374.0
BYD1_k127_877097_7 Enoyl-CoA hydratase/isomerase K11264 - 4.1.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003152 346.0
BYD1_k127_877097_8 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 292.0
BYD1_k127_877097_9 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000005131 234.0
BYD1_k127_8926358_0 Transport of potassium into the cell K03549 - - 7.357e-248 779.0
BYD1_k127_8926358_1 belongs to the aldehyde dehydrogenase family K21802 - 1.2.1.67 4.789e-216 679.0
BYD1_k127_8926358_10 PFAM AMMECR1 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000008683 219.0
BYD1_k127_8926358_11 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000000000000000008089 142.0
BYD1_k127_8926358_12 Dienelactone hydrolase - - - 0.0000000000000000000000000000000000361 143.0
BYD1_k127_8926358_2 Radical SAM K04069 - 1.97.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004252 589.0
BYD1_k127_8926358_3 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 506.0
BYD1_k127_8926358_4 Belongs to the enoyl-CoA hydratase isomerase family K18383 - 4.1.2.41,4.2.1.101 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 469.0
BYD1_k127_8926358_5 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 457.0
BYD1_k127_8926358_6 Domain of unknown function (DUF4010) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002506 443.0
BYD1_k127_8926358_7 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 - 2.7.7.60 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004096 297.0
BYD1_k127_8926358_8 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003891 313.0
BYD1_k127_8926358_9 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000006504 241.0
BYD1_k127_9075551_0 Domain present in phytochromes and cGMP-specific phosphodiesterases. K02584 - - 4.387e-230 739.0
BYD1_k127_9075551_1 Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily - - - 4.767e-204 653.0
BYD1_k127_9075551_10 Cobalamin B12-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006383 280.0
BYD1_k127_9075551_11 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006342 284.0
BYD1_k127_9075551_12 Related to nicotinamidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004462 261.0
BYD1_k127_9075551_13 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001924 246.0
BYD1_k127_9075551_14 Part of a membrane complex involved in electron transport K03612 - - 0.0000000000000000000000000000000000000000000000000000000000000000648 247.0
BYD1_k127_9075551_15 Pas domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000007819 207.0
BYD1_k127_9075551_16 - - - - 0.000000000000000000000000000000000000000000000000009174 186.0
BYD1_k127_9075551_17 Protein of unknown function (DUF2867) - - - 0.00000000000000000000000000000000000000000000000002034 185.0
BYD1_k127_9075551_18 Rhodanese - - - 0.00000000000000000000000000000000000000000000000009331 194.0
BYD1_k127_9075551_19 nucleic acid-binding protein contains PIN domain - - - 0.00000000000000000000000000000000000000004277 155.0
BYD1_k127_9075551_2 PAS PAC sensor signal transduction histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 564.0
BYD1_k127_9075551_20 Protein of unknown function (DUF1272) K09984 - - 0.0000000000000000000000000000000000001581 142.0
BYD1_k127_9075551_21 Belongs to the UPF0125 (RnfH) family K09801 - - 0.000000000000000000000000000000000006812 148.0
BYD1_k127_9075551_22 Pas domain s-box - - - 0.000000000000000000000000000000201 139.0
BYD1_k127_9075551_23 Bacterial antitoxin of type II TA system, VapB - - - 0.00000000000000006875 82.0
BYD1_k127_9075551_24 Glutaredoxin - - - 0.000000000001972 78.0
BYD1_k127_9075551_25 - - - - 0.000001312 62.0
BYD1_k127_9075551_3 Part of a membrane complex involved in electron transport K03614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 484.0
BYD1_k127_9075551_4 PFAM Uroporphyrinogen decarboxylase (URO-D) K01599 - 4.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 419.0
BYD1_k127_9075551_5 PFAM 2Fe-2S iron-sulfur cluster binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003061 390.0
BYD1_k127_9075551_6 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 375.0
BYD1_k127_9075551_7 PFAM LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007899 314.0
BYD1_k127_9075551_8 Part of a membrane complex involved in electron transport K03613 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003171 306.0
BYD1_k127_9075551_9 Part of a membrane complex involved in electron transport K03617 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006431 300.0
BYD1_k127_9117637_0 Belongs to the ALAD family K01698 - 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001228 546.0
BYD1_k127_9117637_1 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003268 385.0
BYD1_k127_9117637_2 had-superfamily hydrolase subfamily ia, variant 3 K07025 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002428 301.0
BYD1_k127_9117637_3 Bacterial regulatory proteins, tetR family K05501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007162 256.0
BYD1_k127_9126171_0 Uncharacterized protein family UPF0004 K06168 - 2.8.4.3 1.174e-215 680.0
BYD1_k127_9126171_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 8.031e-213 686.0
BYD1_k127_9126171_10 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 348.0
BYD1_k127_9126171_11 Polysulphide reductase, NrfD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007659 239.0
BYD1_k127_9126171_12 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.00000000000000000000000000000000000000000000000000001694 194.0
BYD1_k127_9126171_2 4Fe-4S dicluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 493.0
BYD1_k127_9126171_3 phosphate starvation-inducible protein PhoH K06217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 483.0
BYD1_k127_9126171_4 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 499.0
BYD1_k127_9126171_5 Sigma-54 interaction domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 473.0
BYD1_k127_9126171_6 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007521 425.0
BYD1_k127_9126171_7 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 420.0
BYD1_k127_9126171_8 Mg2 and Co2 transporter CorC K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 406.0
BYD1_k127_9126171_9 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001707 389.0
BYD1_k127_9128618_0 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 550.0
BYD1_k127_9128618_1 ZIP Zinc transporter K16267 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007522 419.0
BYD1_k127_9128618_2 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000001239 232.0
BYD1_k127_9128618_3 Ferric uptake regulator family K03711 - - 0.000000000000000000000000000007712 132.0
BYD1_k127_9136870_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.499e-312 975.0
BYD1_k127_9136870_1 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 4.108e-220 685.0
BYD1_k127_9136870_2 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 433.0
BYD1_k127_9136870_3 Belongs to the FPP GGPP synthase family K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 379.0
BYD1_k127_9136870_4 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009878 361.0
BYD1_k127_9136870_5 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004241 336.0
BYD1_k127_9136870_6 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004807 331.0
BYD1_k127_9136870_7 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000000000001784 216.0
BYD1_k127_9136870_8 SpoIIAA-like - - - 0.0000000000000000000000000000000000000461 162.0
BYD1_k127_9136870_9 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000003659 90.0
BYD1_k127_9335567_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 4.541e-222 704.0
BYD1_k127_9335567_1 Type II secretion system K02455 - - 0.0000000000000000000000000000000000000006014 149.0
BYD1_k127_9335567_2 - - - - 0.0000000000000000000001085 108.0
BYD1_k127_9335567_3 Secretin and TonB N terminus short domain K02453 - - 0.000000000000000006407 91.0
BYD1_k127_9335567_4 Pilus assembly protein, PilO - - - 0.00000000000000005079 92.0
BYD1_k127_9335567_5 - - - - 0.00000000000009136 79.0
BYD1_k127_9380376_0 Cysteine-rich domain K00113 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006076 452.0
BYD1_k127_9380376_1 PFAM aldehyde ferredoxin oxidoreductase K03738 - 1.2.7.5 0.0000000000000000000000000000000000000000000001833 173.0
BYD1_k127_9380376_2 Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin - - - 0.0000000000000000000000000005052 117.0
BYD1_k127_9380376_3 4Fe-4S binding domain - - - 0.0000000000000002477 81.0
BYD1_k127_9380634_0 GTP-binding GTPase Middle Region - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003511 304.0
BYD1_k127_9380634_1 chain release factor K15034 - - 0.00000000000000000000000000000000000000000000000002017 191.0
BYD1_k127_9380634_3 COG2346, Truncated hemoglobins - - - 0.0000000000000000000000000000000001271 139.0
BYD1_k127_9380634_4 - - - - 0.0000000000000000000006715 102.0
BYD1_k127_9380634_5 - - - - 0.0000000009615 68.0
BYD1_k127_9573573_0 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 366.0
BYD1_k127_9573573_1 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 343.0
BYD1_k127_9573573_2 ATPases involved in chromosome partitioning - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007052 321.0
BYD1_k127_9573573_3 Type 12 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000002557 233.0
BYD1_k127_9573573_4 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000006127 202.0
BYD1_k127_9573573_5 - - - - 0.00000000000000000000000000000000000437 142.0
BYD1_k127_9573573_6 - - - - 0.00000000001412 66.0
BYD1_k127_9573573_7 - - - - 0.00002387 48.0
BYD1_k127_9612420_0 FAD linked oxidase - - - 0.0 1970.0
BYD1_k127_9612420_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 0.0 1497.0
BYD1_k127_9612420_10 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 555.0
BYD1_k127_9612420_11 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003782 513.0
BYD1_k127_9612420_12 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007143 514.0
BYD1_k127_9612420_13 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 475.0
BYD1_k127_9612420_14 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007472 466.0
BYD1_k127_9612420_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005052 460.0
BYD1_k127_9612420_16 Histidine kinase K07636 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005476 449.0
BYD1_k127_9612420_17 Mate efflux family protein K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 441.0
BYD1_k127_9612420_18 Outer membrane efflux protein K18139 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001637 436.0
BYD1_k127_9612420_19 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008735 409.0
BYD1_k127_9612420_2 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 1.248e-285 882.0
BYD1_k127_9612420_20 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 398.0
BYD1_k127_9612420_21 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 394.0
BYD1_k127_9612420_22 Protein of unknown function (DUF3443) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005478 334.0
BYD1_k127_9612420_23 epimerase dehydratase K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 310.0
BYD1_k127_9612420_24 Methionine biosynthesis protein MetW - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 284.0
BYD1_k127_9612420_25 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003113 299.0
BYD1_k127_9612420_26 import inner membrane translocase subunit Tim44 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001042 287.0
BYD1_k127_9612420_27 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000159 279.0
BYD1_k127_9612420_28 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.00000000000000000000000000000000000000000000000000000000000000000004175 233.0
BYD1_k127_9612420_29 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000000151 217.0
BYD1_k127_9612420_3 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 6.434e-269 832.0
BYD1_k127_9612420_30 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000000000000000000000000000005327 213.0
BYD1_k127_9612420_31 Protein of unknown function (DUF971) - - - 0.00000000000000000000000000000000000000000000000000000001585 200.0
BYD1_k127_9612420_32 signal transduction protein containing EAL and modified HD-GYP - - - 0.000000000000000000000000000000000000000000000000000002459 204.0
BYD1_k127_9612420_33 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.0000000000000000000000000000000000000000000000000000129 194.0
BYD1_k127_9612420_34 Bacterial transcriptional repressor C-terminal - - - 0.0000000000000000000000000000000000000000000002995 173.0
BYD1_k127_9612420_35 membrane - - - 0.000000000000000000000000000000000000000000002005 168.0
BYD1_k127_9612420_36 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.000000000000000000000000000000000000000000002377 169.0
BYD1_k127_9612420_37 Histidine triad (HIT) - - - 0.000000000000000000000000000000000000000000003853 169.0
BYD1_k127_9612420_38 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000002062 169.0
BYD1_k127_9612420_39 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000000000006707 152.0
BYD1_k127_9612420_4 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 1.157e-249 778.0
BYD1_k127_9612420_40 protein conserved in bacteria K03690 - - 0.00000000000000000000000000000000001141 144.0
BYD1_k127_9612420_41 ABC-type amino acid transport signal transduction systems periplasmic component domain - - - 0.000000000000000000000000000000001236 141.0
BYD1_k127_9612420_42 PFAM ABC transporter K02028,K09972,K10004 - 3.6.3.21 0.0000000000000000000000000000006708 121.0
BYD1_k127_9612420_43 Protein of unknown function (DUF2844) - - - 0.0000000000000000000000000001563 120.0
BYD1_k127_9612420_5 Fumarase C C-terminus K01744 - 4.3.1.1 4.041e-220 693.0
BYD1_k127_9612420_6 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08309 - - 2.596e-208 666.0
BYD1_k127_9612420_7 Bacterial regulatory protein, Fis family K10126 - - 2.006e-207 657.0
BYD1_k127_9612420_8 His Kinase A (phosphoacceptor) domain K10125 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008507 611.0
BYD1_k127_9612420_9 sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 582.0
BYD1_k127_9632837_0 Belongs to the NiFe NiFeSe hydrogenase large subunit family K06281 - 1.12.99.6 7.982e-308 958.0
BYD1_k127_9632837_1 4Fe-4S ferredoxin iron-sulfur binding domain protein K21834 - - 8.728e-230 727.0
BYD1_k127_9632837_10 belongs to the aldehyde dehydrogenase family K00128,K00138 - 1.2.1.3 0.000000000000000000000000000004251 122.0
BYD1_k127_9632837_11 - - - - 0.0000000000000000000000000000685 121.0
BYD1_k127_9632837_12 Histidine kinase - - - 0.0000000000000000246 93.0
BYD1_k127_9632837_13 Sensory box GGDEF family protein K20960 - 2.7.7.65 0.0000003589 57.0
BYD1_k127_9632837_2 COG1138 Cytochrome c biogenesis factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002561 582.0
BYD1_k127_9632837_3 TIGRFAM hydrogenase (NiFe) small subunit (hydA) K06282 - 1.12.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002498 544.0
BYD1_k127_9632837_4 ABC transporter transmembrane region K06147 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005737 438.0
BYD1_k127_9632837_5 nitrate reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008228 330.0
BYD1_k127_9632837_6 COG0644 Dehydrogenases (flavoproteins) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 327.0
BYD1_k127_9632837_7 Bacterial protein of unknown function (Gcw_chp) - - - 0.00000000000000000000000000000000000000000000000000000000000000001189 243.0
BYD1_k127_9632837_8 S53 subtilisin kexin sedolisin - - - 0.0000000000000000000000000000000000000000002237 173.0
BYD1_k127_9632837_9 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000007253 136.0
BYD1_k127_9639486_0 von Willebrand factor, type A - - - 0.0 1142.0
BYD1_k127_9639486_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1098.0
BYD1_k127_9639486_2 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 - 3.1.3.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 543.0
BYD1_k127_9639486_3 CbbQ/NirQ/NorQ C-terminal - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 481.0
BYD1_k127_9639486_4 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008774 443.0
BYD1_k127_9639486_6 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000003827 237.0
BYD1_k127_9697707_0 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 3.06e-219 693.0
BYD1_k127_9697707_1 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001478 575.0
BYD1_k127_9697707_2 amino acid K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004938 342.0
BYD1_k127_9697707_3 Sulfite exporter TauE/SafE K07090 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008321 297.0
BYD1_k127_9697707_4 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000009668 116.0
BYD1_k127_9697707_5 Ribosomal protein L34 K02914 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000001149 73.0
BYD1_k127_9697707_6 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 - 3.1.26.5 0.0000000000001647 76.0
BYD1_k127_9793215_0 PFAM glycosyl transferase, family 35 K00688 - 2.4.1.1 0.0 1092.0
BYD1_k127_9793215_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 0.0 1027.0
BYD1_k127_9793215_10 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001796 401.0
BYD1_k127_9793215_11 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004335 290.0
BYD1_k127_9793215_12 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000008778 269.0
BYD1_k127_9793215_13 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 GO:0000166,GO:0003674,GO:0003824,GO:0004146,GO:0005488,GO:0005542,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008144,GO:0008150,GO:0008152,GO:0016491,GO:0016645,GO:0016646,GO:0019842,GO:0031406,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043177,GO:0044424,GO:0044444,GO:0044464,GO:0048037,GO:0050661,GO:0050662,GO:0050896,GO:0051870,GO:0051871,GO:0055114,GO:0070401,GO:0070402,GO:0072341,GO:0097159,GO:1901265,GO:1901363 1.5.1.3 0.000000000000000000000000000000000000000000000000001594 200.0
BYD1_k127_9793215_14 Belongs to the UPF0307 family K09889 - - 0.000000000000000000000000000000000000000001071 179.0
BYD1_k127_9793215_15 Transcriptional regulator - - - 0.0000000000000000000007405 98.0
BYD1_k127_9793215_16 Protein of unknown function (DUF2934) - - - 0.0000000004742 69.0
BYD1_k127_9793215_2 Belongs to the glycosyl hydrolase 57 family K22451 - 2.4.1.25 2.243e-248 800.0
BYD1_k127_9793215_3 Glycosyl hydrolase family 57 - - - 9.522e-226 713.0
BYD1_k127_9793215_4 Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc K00975 - 2.7.7.27 2.11e-208 655.0
BYD1_k127_9793215_5 modulator of DNA gyrase K03592 - - 5.607e-198 625.0
BYD1_k127_9793215_6 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K01810 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 5.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001083 594.0
BYD1_k127_9793215_7 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 522.0
BYD1_k127_9793215_8 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857 505.0
BYD1_k127_9793215_9 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001544 478.0
BYD1_k127_9815571_0 Pyridine nucleotide-disulphide oxidoreductase - - - 2.185e-291 918.0
BYD1_k127_9815571_1 PFAM Thiamine pyrophosphate K00170,K18356 - 1.2.1.58,1.2.7.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000231 576.0
BYD1_k127_9815571_10 Pyruvate:ferredoxin oxidoreductase core domain II K00169,K03737 - 1.2.7.1 0.0000000000001072 77.0
BYD1_k127_9815571_2 catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates K00179 - 1.2.7.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001817 542.0
BYD1_k127_9815571_3 pyruvate flavodoxin ferredoxin oxidoreductase K00169 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 511.0
BYD1_k127_9815571_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002181 308.0
BYD1_k127_9815571_5 BrnA antitoxin of type II toxin-antitoxin system - - - 0.0000000000000000000000000000000000000000000000001196 177.0
BYD1_k127_9815571_6 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000001149 156.0
BYD1_k127_9815571_7 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000007236 159.0
BYD1_k127_9815571_8 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system K09803 - - 0.0000000000000000000000001425 108.0
BYD1_k127_9815571_9 - - - - 0.00000000000001832 76.0
BYD1_k127_9841359_0 Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation K02232 - 6.3.5.10 1.459e-222 698.0
BYD1_k127_9841359_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 3.486e-220 709.0
BYD1_k127_9841359_10 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002608 419.0
BYD1_k127_9841359_11 Glycosyl transferases group 1 K02844 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003354 419.0
BYD1_k127_9841359_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001494 416.0
BYD1_k127_9841359_13 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 406.0
BYD1_k127_9841359_14 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000481 384.0
BYD1_k127_9841359_15 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000362 368.0
BYD1_k127_9841359_16 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009072 370.0
BYD1_k127_9841359_17 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 365.0
BYD1_k127_9841359_18 decarboxylates L-threonine-O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, the precursor for the linkage between the nucleotide loop and the corrin ring in cobalamin K00817,K02225 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 332.0
BYD1_k127_9841359_19 Polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 338.0
BYD1_k127_9841359_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 1.369e-194 613.0
BYD1_k127_9841359_20 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001737 293.0
BYD1_k127_9841359_21 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 292.0
BYD1_k127_9841359_22 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003846 296.0
BYD1_k127_9841359_23 Phasin protein - - - 0.00000000000000000000000000000000000000000000000000000006564 200.0
BYD1_k127_9841359_24 Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate K02231 - 2.7.1.156,2.7.7.62 0.0000000000000000000000000000000000000000000000000000001302 201.0
BYD1_k127_9841359_25 helix_turn_helix ASNC type - - - 0.00000000000000000000000000000000000000000000001244 176.0
BYD1_k127_9841359_26 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.00000000000000000000000000000000000000000000005875 188.0
BYD1_k127_9841359_27 Outer membrane protein V K07274 - - 0.00000000000000000000000000000000000000003992 168.0
BYD1_k127_9841359_28 -O-antigen K02847,K21003 - - 0.00000000000000000000000000000000002901 157.0
BYD1_k127_9841359_29 LysE type translocator - - - 0.000000000000000000000000000000001868 137.0
BYD1_k127_9841359_3 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002683 548.0
BYD1_k127_9841359_30 Protein conserved in bacteria K09954 - - 0.000000000000000000000000000000005874 128.0
BYD1_k127_9841359_31 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000767 138.0
BYD1_k127_9841359_32 - - - - 0.0000000000000004801 84.0
BYD1_k127_9841359_4 MacB-like periplasmic core domain K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 549.0
BYD1_k127_9841359_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001214 488.0
BYD1_k127_9841359_6 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 469.0
BYD1_k127_9841359_7 amino acid K01999 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004934 445.0
BYD1_k127_9841359_8 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 - 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 443.0
BYD1_k127_9841359_9 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 434.0
BYD1_k127_9883878_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 0.0 1759.0
BYD1_k127_9883878_1 Methyl-viologen-reducing hydrogenase, delta subunit K16886 - - 8.867e-316 987.0
BYD1_k127_9883878_2 Glucose inhibited division protein A K03388,K16885 - 1.8.7.3,1.8.98.4,1.8.98.5,1.8.98.6 6.151e-216 677.0
BYD1_k127_9883878_3 PFAM 4Fe-4S K00184,K21308 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 467.0
BYD1_k127_9883878_4 DMSO reductase anchor subunit (DmsC) K21309 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 456.0
BYD1_k127_9883878_5 Calcineurin-like phosphoesterase superfamily domain K07095 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003206 301.0
BYD1_k127_9883878_6 Sulfurtransferase TusA K04085 - - 0.000000000000000000000000000000002061 130.0
BYD1_k127_9883878_7 - - - - 0.000000000000000000000000004096 115.0
BYD1_k127_989173_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0 1019.0
BYD1_k127_989173_1 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007589 277.0
BYD1_k127_989173_2 dihydropteroate synthase K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000002635 169.0
BYD1_k127_9904027_0 COG0488 ATPase components of ABC transporters with duplicated ATPase domains K06158 - - 1.584e-274 861.0
BYD1_k127_9904027_1 glutamate--cysteine ligase K01919 - 6.3.2.2 2.556e-211 668.0
BYD1_k127_9904027_10 phosphoserine phosphatase K02203 - 2.7.1.39,3.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 340.0
BYD1_k127_9904027_11 HD domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 323.0
BYD1_k127_9904027_12 Protein of unknown function (DUF3050) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001281 287.0
BYD1_k127_9904027_13 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003697 266.0
BYD1_k127_9904027_14 Phosphotransferase system, mannose fructose-specific component IIA K02821 - 2.7.1.194 0.000000000000000000000000000000000000000000000000000001142 194.0
BYD1_k127_9904027_15 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000208 197.0
BYD1_k127_9904027_16 Histidine kinase - - - 0.0000000000000000000000000000000000000002483 158.0
BYD1_k127_9904027_17 Phosphotransferase System K11189 - - 0.0000000000000000000000000000000006283 134.0
BYD1_k127_9904027_18 - - - - 0.000000000000000000000406 99.0
BYD1_k127_9904027_2 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006263 525.0
BYD1_k127_9904027_3 Eco57I restriction-modification methylase K07317 - 2.1.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 471.0
BYD1_k127_9904027_4 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001699 453.0
BYD1_k127_9904027_5 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003174 412.0
BYD1_k127_9904027_6 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009323 413.0
BYD1_k127_9904027_7 crp fnr family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 361.0
BYD1_k127_9904027_8 HD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 362.0
BYD1_k127_9904027_9 Membrane transport protein K07088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006272 351.0
BYD1_k127_9935389_0 - - - - 9.705e-202 632.0
BYD1_k127_9935389_1 A domain in the BMP inhibitor chordin and in microbial proteins. - - - 0.000000000000000000000000000000000000003306 151.0
BYD1_k127_9935389_2 Cytochrome c - - - 0.0000000000000000000001663 100.0
BYD1_k127_9935389_3 Redoxin K03386 - 1.11.1.15 0.00000000003669 65.0