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Overview

ID MAG00076
Name BYD2_bin.29
Sample SMP0002
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family SG8-39
Genus SCGC-AG-212-J23
Species
Assembly information
Completeness (%) 87.68
Contamination (%) 5.9
GC content (%) 68.0
N50 (bp) 13,746
Genome size (bp) 3,389,607

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes3540

Gene name Description KEGG GOs EC E-value Score Sequence
BYD2_k127_1008456_0 Proline racemase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005055 401.0
BYD2_k127_1008456_1 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007919 306.0
BYD2_k127_1008456_2 cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000392 228.0
BYD2_k127_1008456_3 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000001112 233.0
BYD2_k127_1008456_4 polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000005321 210.0
BYD2_k127_1008456_5 Cytochrome c - - - 0.000000000000000000000000000000000003186 146.0
BYD2_k127_1021417_0 Thiolase, C-terminal domain K00626 - 2.3.1.9 6.494e-197 619.0
BYD2_k127_1021417_1 Ethylbenzene dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 528.0
BYD2_k127_1021417_10 low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000001131 222.0
BYD2_k127_1021417_11 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000005368 206.0
BYD2_k127_1021417_12 PFAM OsmC family protein - - - 0.00000000000000000000000000000000000000000000000000004971 194.0
BYD2_k127_1021417_13 Cytochrome c K08738 - - 0.0000000000000000000000000000000000000004165 158.0
BYD2_k127_1021417_14 Transcriptional regulator K03892 - - 0.00000000000000000000000000000000004445 137.0
BYD2_k127_1021417_15 Ribbon-helix-helix domain - - - 0.000000000000000000000000001711 115.0
BYD2_k127_1021417_16 Iron-binding zinc finger CDGSH type K05710 - - 0.00000000001096 68.0
BYD2_k127_1021417_17 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.000000002142 59.0
BYD2_k127_1021417_2 Sodium Bile acid symporter family K03325 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003942 511.0
BYD2_k127_1021417_3 Fumarate reductase flavoprotein C-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 464.0
BYD2_k127_1021417_4 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002871 462.0
BYD2_k127_1021417_5 Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000278 416.0
BYD2_k127_1021417_6 Cation efflux family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 295.0
BYD2_k127_1021417_7 Belongs to the MenA family. Type 1 subfamily K02548 GO:0000287,GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016020,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044464,GO:0046428,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0071944,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000001833 252.0
BYD2_k127_1021417_8 binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008936 243.0
BYD2_k127_1021417_9 Domain of unknown function (DUF4439) - - - 0.000000000000000000000000000000000000000000000000000000000000000294 221.0
BYD2_k127_1068388_0 PFAM Glyoxalase bleomycin resistance protein dioxygenase K00457 - 1.13.11.27 3.762e-215 670.0
BYD2_k127_1068388_1 Belongs to the NAD(P)-dependent epimerase dehydratase family K01784 - 5.1.3.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007543 452.0
BYD2_k127_1068388_10 lactoylglutathione lyase activity K08234 - - 0.0000000000000000000000000000000001483 139.0
BYD2_k127_1068388_11 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000000000000000000000000000001977 147.0
BYD2_k127_1068388_12 Trap-type c4-dicarboxylate transport system, small permease component K11689 - - 0.0000000000000002008 85.0
BYD2_k127_1068388_2 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001287 399.0
BYD2_k127_1068388_3 Biopterin-dependent aromatic amino acid hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 364.0
BYD2_k127_1068388_4 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 371.0
BYD2_k127_1068388_5 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006126 266.0
BYD2_k127_1068388_6 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000000000000000006946 232.0
BYD2_k127_1068388_7 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000002447 222.0
BYD2_k127_1068388_8 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000005136 177.0
BYD2_k127_1068388_9 Carboxymuconolactone decarboxylase family - - - 0.0000000000000000000000000000000000000000001672 166.0
BYD2_k127_1074980_0 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004315 533.0
BYD2_k127_1074980_1 Belongs to the peptidase S1C family K04691,K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007667 486.0
BYD2_k127_1074980_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005382 282.0
BYD2_k127_1074980_11 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000001013 251.0
BYD2_k127_1074980_12 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 GO:0000105,GO:0003674,GO:0003824,GO:0004635,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016814,GO:0018130,GO:0019238,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.4.19,3.6.1.31 0.0000000000000000000000000000000000000000000000000704 192.0
BYD2_k127_1074980_13 ABC-type branched-chain amino acid transport systems ATPase component K01996 - - 0.00000000000000000000000000000000000000000000001193 180.0
BYD2_k127_1074980_14 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases K02503 - - 0.000000000000000000000000000000000000000000004503 171.0
BYD2_k127_1074980_15 phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.0000000000000000000000000000000007284 134.0
BYD2_k127_1074980_16 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000000000000000000001412 113.0
BYD2_k127_1074980_17 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000002284 106.0
BYD2_k127_1074980_18 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000001606 104.0
BYD2_k127_1074980_2 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002348 447.0
BYD2_k127_1074980_3 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 432.0
BYD2_k127_1074980_4 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000873 421.0
BYD2_k127_1074980_5 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001022 409.0
BYD2_k127_1074980_6 1-(5-phosphoribosyl)-5- (5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase K01814 - 5.3.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003281 378.0
BYD2_k127_1074980_7 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 374.0
BYD2_k127_1074980_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006877 345.0
BYD2_k127_1074980_9 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 327.0
BYD2_k127_1145272_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 3.826e-278 869.0
BYD2_k127_1145272_1 Transport of potassium into the cell K03549 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004833 578.0
BYD2_k127_1145272_10 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 293.0
BYD2_k127_1145272_11 ABC-3 protein K02075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001309 264.0
BYD2_k127_1145272_12 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.000000000000000000000000000000000000000000000000000000000000004623 227.0
BYD2_k127_1145272_13 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K04750 - - 0.0000000000000000000000000000000000000000000000000000000001995 207.0
BYD2_k127_1145272_14 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000004234 100.0
BYD2_k127_1145272_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002018 560.0
BYD2_k127_1145272_3 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 503.0
BYD2_k127_1145272_4 aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 510.0
BYD2_k127_1145272_5 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 452.0
BYD2_k127_1145272_6 Sugar (and other) transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001881 450.0
BYD2_k127_1145272_7 phosphate-selective porin O and P - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 431.0
BYD2_k127_1145272_8 Threonine aldolase K01620 - 4.1.2.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006903 374.0
BYD2_k127_1145272_9 Zinc-uptake complex component A periplasmic K02077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007483 375.0
BYD2_k127_1298896_0 Transporter associated domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002245 491.0
BYD2_k127_1298896_1 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004642 278.0
BYD2_k127_1298896_10 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.000000000000000039 81.0
BYD2_k127_1298896_2 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000005867 246.0
BYD2_k127_1298896_3 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003168 245.0
BYD2_k127_1298896_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000000000000000000000000000000000000000211 220.0
BYD2_k127_1298896_5 acetyltransferase K00661 - 2.3.1.79 0.000000000000000000000000000000000000000000000000000186 195.0
BYD2_k127_1298896_6 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.00000000000000000000000000000000000000003049 156.0
BYD2_k127_1298896_7 alpha beta - - - 0.0000000000000000000000000000000000003623 151.0
BYD2_k127_1298896_8 AraC-like ligand binding domain - - - 0.00000000000000000000000000000000006386 149.0
BYD2_k127_1298896_9 methyltransferase activity - - - 0.00000000000000000000001506 115.0
BYD2_k127_1330790_0 PFAM NADH Ubiquinone plastoquinone (complex I) K12141 - - 6.801e-284 876.0
BYD2_k127_1330790_1 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 7.1e-283 884.0
BYD2_k127_1330790_2 NADH ubiquinone plastoquinone (Complex I) - - - 1.21e-234 744.0
BYD2_k127_1330790_3 NADH dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 435.0
BYD2_k127_1330790_4 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003636 364.0
BYD2_k127_1330790_5 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002917 310.0
BYD2_k127_1330790_6 PFAM NADH dehydrogenase (ubiquinone) 30 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001124 256.0
BYD2_k127_1330790_7 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000189 268.0
BYD2_k127_1330790_8 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000000196 145.0
BYD2_k127_1330790_9 PFAM CopG domain protein DNA-binding domain protein - - - 0.00000000000000004007 88.0
BYD2_k127_1380376_0 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0 1482.0
BYD2_k127_1380376_1 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1045.0
BYD2_k127_1380376_10 S4 RNA-binding domain K06178 - 5.4.99.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001146 283.0
BYD2_k127_1380376_11 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000577 274.0
BYD2_k127_1380376_12 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000002574 273.0
BYD2_k127_1380376_13 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001586 258.0
BYD2_k127_1380376_14 COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000002849 230.0
BYD2_k127_1380376_15 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000007131 227.0
BYD2_k127_1380376_16 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000003323 156.0
BYD2_k127_1380376_17 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000004406 132.0
BYD2_k127_1380376_18 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.00000000000000000000000000000005088 128.0
BYD2_k127_1380376_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0 1026.0
BYD2_k127_1380376_3 Participates in both transcription termination and antitermination K02600 - - 3.699e-223 701.0
BYD2_k127_1380376_4 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 6.182e-212 662.0
BYD2_k127_1380376_5 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002777 477.0
BYD2_k127_1380376_6 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003663 367.0
BYD2_k127_1380376_7 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003329 349.0
BYD2_k127_1380376_8 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 343.0
BYD2_k127_1380376_9 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 325.0
BYD2_k127_1380890_0 Pyruvate phosphate dikinase, PEP/pyruvate binding domain K01007 - 2.7.9.2 0.0 1108.0
BYD2_k127_1380890_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.016e-296 927.0
BYD2_k127_1380890_10 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009342 347.0
BYD2_k127_1380890_11 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005126 307.0
BYD2_k127_1380890_12 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001619 259.0
BYD2_k127_1380890_13 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000002502 233.0
BYD2_k127_1380890_14 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.0000000000000000000000000000000000000000000000000000000000000007471 228.0
BYD2_k127_1380890_15 Methionine aminopeptidase K01265 - 3.4.11.18 0.00000000000000000000000000000000000000000000000000000000005614 205.0
BYD2_k127_1380890_16 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.0000000000000000000000000000000000000000000000000000002828 199.0
BYD2_k127_1380890_17 Belongs to the skp family K06142 - - 0.00000000000000000000000000000000000000000000000000002361 193.0
BYD2_k127_1380890_18 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.00000000000000000000000000000000000000000001071 181.0
BYD2_k127_1380890_19 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000001397 175.0
BYD2_k127_1380890_2 Peptidase family M50 K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006885 495.0
BYD2_k127_1380890_3 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009457 456.0
BYD2_k127_1380890_4 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 428.0
BYD2_k127_1380890_5 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003566 395.0
BYD2_k127_1380890_6 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 376.0
BYD2_k127_1380890_7 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005246 359.0
BYD2_k127_1380890_8 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 359.0
BYD2_k127_1380890_9 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 352.0
BYD2_k127_1387201_0 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 518.0
BYD2_k127_1387201_1 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007215 404.0
BYD2_k127_1387201_10 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.000000001287 59.0
BYD2_k127_1387201_2 regulator of disulfide bond formation K07397 - - 0.00000000000000000000000000000000000000000000000000000000000000000005322 236.0
BYD2_k127_1387201_3 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000000000000002683 212.0
BYD2_k127_1387201_4 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000001169 215.0
BYD2_k127_1387201_5 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.0000000000000000000000000000000000000000000000000000000006442 205.0
BYD2_k127_1387201_6 ligase activity - - - 0.000000000000000000000000000000000000000000000002827 194.0
BYD2_k127_1387201_7 - - - - 0.0000000000000000000000000000000000000000000002243 177.0
BYD2_k127_1387201_8 S-adenosyl-L-methionine methyltransferase - - - 0.00000000000000000000000000000000000000000009282 167.0
BYD2_k127_1387201_9 Integral membrane protein CcmA involved in cell shape determination - - - 0.00000000000000000000000000000000000000006948 166.0
BYD2_k127_140_0 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 4.634e-227 718.0
BYD2_k127_140_1 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002193 365.0
BYD2_k127_140_2 MaoC like domain - - - 0.000000000000000000000000000000000000000000006295 180.0
BYD2_k127_140_3 PFAM thioesterase superfamily protein K01075 - 3.1.2.23 0.00000000000000000000000000000002563 130.0
BYD2_k127_1419622_0 DegT/DnrJ/EryC1/StrS aminotransferase family K12452 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003079 588.0
BYD2_k127_1419622_1 radical SAM domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005517 520.0
BYD2_k127_1419622_2 Polysaccharide biosynthesis protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007362 494.0
BYD2_k127_1419622_3 GHMP kinases N terminal domain K07031 - 2.7.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 473.0
BYD2_k127_1419622_4 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor K00162,K21417 - 1.2.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006339 456.0
BYD2_k127_1419622_5 Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction K02377 - 1.1.1.271 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003935 404.0
BYD2_k127_1419622_6 Nucleotidyl transferase K15669 - 2.7.7.71 0.0000000000000000000000000000000000000000000000000000000000000003151 230.0
BYD2_k127_1419622_7 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161,K21416 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000002217 228.0
BYD2_k127_1483715_0 Bacterial protein of unknown function (DUF853) K06915 - - 6.323e-211 678.0
BYD2_k127_1483715_1 Involved in the tonB-independent uptake of proteins K03641 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004403 570.0
BYD2_k127_1483715_10 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000004781 188.0
BYD2_k127_1483715_11 Belongs to the ompA family K03640 - - 0.000000000000000000000000000000000000000000000005341 183.0
BYD2_k127_1483715_12 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000000005007 171.0
BYD2_k127_1483715_13 TonB C terminal K03646 - - 0.00000000000000000000000000000000000000002509 168.0
BYD2_k127_1483715_14 Tol-Pal system-associated acyl-CoA thioesterase K07107 - - 0.000000000000000000000000000006266 131.0
BYD2_k127_1483715_15 Biopolymer transport protein ExbD TolR K03560 - - 0.0000000000000000000000000001015 121.0
BYD2_k127_1483715_16 OmpA-like transmembrane domain - - - 0.0000000000000000000001796 106.0
BYD2_k127_1483715_17 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.0000001892 52.0
BYD2_k127_1483715_2 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 527.0
BYD2_k127_1483715_3 Domain of unknown function (DUF4105) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 520.0
BYD2_k127_1483715_4 transcriptional regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 375.0
BYD2_k127_1483715_5 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 375.0
BYD2_k127_1483715_6 Mota tolq exbb proton channel K03562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 329.0
BYD2_k127_1483715_7 Prolyl oligopeptidase family K06889 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000124 282.0
BYD2_k127_1483715_8 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000791 249.0
BYD2_k127_1483715_9 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.000000000000000000000000000000000000000000000000000000000000001634 233.0
BYD2_k127_1487907_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009876 479.0
BYD2_k127_1487907_1 2-oxoacid ferredoxin oxidoreductase, alpha subunit K00169,K19070 GO:0003674,GO:0003824,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016625,GO:0016903,GO:0019752,GO:0033609,GO:0033611,GO:0043436,GO:0043648,GO:0043649,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0055114,GO:0071704,GO:1901575 1.2.7.1,1.2.7.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009416 501.0
BYD2_k127_1487907_10 Protein of unknown function (DUF1326) - - - 0.00000000000000000000000000449 119.0
BYD2_k127_1487907_11 PFAM DNA topoisomerase type IA zn finger domain protein - - - 0.0000001432 56.0
BYD2_k127_1487907_2 HI0933-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003789 462.0
BYD2_k127_1487907_3 PFAM Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00170 - 1.2.7.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006138 336.0
BYD2_k127_1487907_4 ubiE/COQ5 methyltransferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 312.0
BYD2_k127_1487907_5 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000002092 225.0
BYD2_k127_1487907_6 oxidoreductase gamma subunit K00172 - 1.2.7.1 0.00000000000000000000000000000000000000000000000000001003 195.0
BYD2_k127_1487907_7 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000006653 194.0
BYD2_k127_1487907_8 HIT domain - - - 0.00000000000000000000000000000000002162 149.0
BYD2_k127_1487907_9 Topoisomerase DNA binding C4 zinc finger K07448 - - 0.00000000000000000000000000000001578 133.0
BYD2_k127_1506606_0 PrkA AAA domain K07180 - - 1.116e-307 953.0
BYD2_k127_1506606_1 Protein of unknown function (DUF444) K09786 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001879 343.0
BYD2_k127_1506606_2 MltA-interacting protein MipA K07274 - - 0.00000000000000000000000000000000000000000000000002299 194.0
BYD2_k127_1506606_3 MAPEG family - - - 0.000000000000000000000000000000000000006112 149.0
BYD2_k127_1621444_0 COG4166 ABC-type oligopeptide transport system, periplasmic component K13893 - - 5.253e-269 838.0
BYD2_k127_1621444_1 RQC K03654 - 3.6.4.12 1.172e-232 736.0
BYD2_k127_1621444_10 - - - - 0.00000000000000000000000000000006841 128.0
BYD2_k127_1621444_11 SMART Cold shock protein K03704 - - 0.000000000000000000000000000002117 122.0
BYD2_k127_1621444_2 Belongs to the ABC transporter superfamily K13896 - - 4.441e-231 743.0
BYD2_k127_1621444_3 transport system, permease component K13894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001232 547.0
BYD2_k127_1621444_4 transport system, permease component K13895 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 548.0
BYD2_k127_1621444_5 PFAM regulatory protein LuxR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002742 518.0
BYD2_k127_1621444_6 thiamine-containing compound biosynthetic process K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 366.0
BYD2_k127_1621444_7 protein conserved in bacteria K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 355.0
BYD2_k127_1621444_8 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005978 306.0
BYD2_k127_1621444_9 of the double-stranded beta helix - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004659 276.0
BYD2_k127_1638253_0 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.0 1024.0
BYD2_k127_1638253_1 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 2.595e-199 634.0
BYD2_k127_1638253_2 epimerase dehydratase K08679 - 5.1.3.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001136 324.0
BYD2_k127_1638253_3 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001613 316.0
BYD2_k127_1638253_4 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 289.0
BYD2_k127_1638253_5 SCP-2 sterol transfer family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000004557 246.0
BYD2_k127_1638253_6 NnrU protein - - - 0.0000000000000000000000000000000000000000000000201 179.0
BYD2_k127_1638253_7 Belongs to the globin family - - - 0.0000000000000000000000000000000000000002967 154.0
BYD2_k127_1638253_8 Thioesterase - - - 0.00000000000000000000000000000000000003717 146.0
BYD2_k127_1657670_0 ABC transporter K06147,K18893 - - 2.312e-254 800.0
BYD2_k127_1657670_1 modulator of DNA gyrase K03568 - - 1.26e-199 634.0
BYD2_k127_1657670_2 Dienelactone hydrolase family K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008947 420.0
BYD2_k127_1657670_3 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008081 316.0
BYD2_k127_1657670_4 COG1788 Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit K01039 - 2.8.3.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 322.0
BYD2_k127_1657670_5 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 307.0
BYD2_k127_1657670_6 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000001204 249.0
BYD2_k127_1657670_7 COG2057 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01040 - 2.8.3.12 0.00000000000000000000000000000000000000000000000000000000002499 215.0
BYD2_k127_1657670_8 - - - - 0.000000000000000000000000000000000000000000000000009813 183.0
BYD2_k127_1657670_9 PFAM Formylglycine-generating sulfatase enzyme K18912,K20333 - 1.14.99.50 0.0000000000000000000000000000000000000000000000018 183.0
BYD2_k127_1681043_0 Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 514.0
BYD2_k127_1681043_1 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000045 418.0
BYD2_k127_1681043_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001026 333.0
BYD2_k127_1681043_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000003902 198.0
BYD2_k127_1681043_4 PFAM Sulfatase K01130 - 3.1.6.1 0.0000000000000000000000000000000000000000000000000003673 188.0
BYD2_k127_1681043_5 Protein of unknown function (DUF1161) - - - 0.000000000000000001621 87.0
BYD2_k127_1681043_6 Domain of unknown function (DUF1992) - - - 0.000000000000005297 89.0
BYD2_k127_1692667_0 Belongs to the helicase family. UvrD subfamily K03582 - 3.1.11.5 4.054e-248 801.0
BYD2_k127_1692667_1 PD-(D/E)XK nuclease superfamily K01144 - 3.1.11.5 8.002e-213 689.0
BYD2_k127_1692667_10 YHS domain protein - - - 0.000000000000000000000000005956 115.0
BYD2_k127_1692667_11 Belongs to the N-Me-Phe pilin family K02650 - - 0.0000000000000000000008324 100.0
BYD2_k127_1692667_12 OmpA-like transmembrane domain - - - 0.000000000000000000002362 101.0
BYD2_k127_1692667_13 - - - - 0.000000000000000000003012 106.0
BYD2_k127_1692667_14 PFAM Uncharacterised protein family UPF0150 - - - 0.00000000005058 66.0
BYD2_k127_1692667_2 COG1271 Cytochrome bd-type quinol oxidase, subunit 1 K00425 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 551.0
BYD2_k127_1692667_3 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 521.0
BYD2_k127_1692667_4 cytochrome d ubiquinol oxidase, subunit II K00426 - 1.10.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009193 370.0
BYD2_k127_1692667_5 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000197 370.0
BYD2_k127_1692667_6 glutathione transferase activity K00799,K03675 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001371 283.0
BYD2_k127_1692667_7 COG2041 Sulfite oxidase and related enzymes K00387 - 1.8.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000006931 281.0
BYD2_k127_1692667_8 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.0000000000000000000000000000000000000000000000000000007451 194.0
BYD2_k127_1692667_9 Cytochrome c, class I K05301 - 1.8.2.1 0.00000000000000000000000000000001189 138.0
BYD2_k127_1749056_0 SMART alpha amylase catalytic sub domain K05343 - 3.2.1.1,5.4.99.16 0.0 1442.0
BYD2_k127_1749056_1 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 7.493e-308 953.0
BYD2_k127_1749056_2 Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1- 4)- glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB K16147 - 2.4.99.16 4.282e-234 739.0
BYD2_k127_1749056_3 TIGRFAM malto-oligosyltrehalose trehalohydrolase K01236 - 3.2.1.141 1.434e-203 659.0
BYD2_k127_1749056_4 PFAM Conserved TM helix repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003969 290.0
BYD2_k127_1749056_5 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004902 265.0
BYD2_k127_1749056_6 SMART alpha amylase catalytic sub domain K00705,K06044 - 2.4.1.25,5.4.99.15 0.0000000000000000000000000000000000000000001015 174.0
BYD2_k127_1749056_7 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.0000000000000000000000000000000000554 137.0
BYD2_k127_1749056_8 bacterial OsmY and nodulation domain - - - 0.0009931 50.0
BYD2_k127_1763083_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 6.677e-223 714.0
BYD2_k127_1763083_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 393.0
BYD2_k127_1763083_2 Predicted membrane protein (DUF2207) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 385.0
BYD2_k127_1763083_3 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002084 278.0
BYD2_k127_1763083_4 LemA family K03744 - - 0.0000000000000000000000000000000000009726 158.0
BYD2_k127_1763083_5 COG1186 Protein chain release factor B K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.00000000000000000001116 96.0
BYD2_k127_1769132_0 twitching motility protein K02670 - - 8.712e-206 644.0
BYD2_k127_1769132_1 twitching motility protein K02669 - - 1.747e-198 621.0
BYD2_k127_1769132_10 Uncharacterised protein family (UPF0093) K08973 - - 0.000000000000000000000000000000000000000000000453 181.0
BYD2_k127_1769132_11 integral membrane protein K02221 - - 0.0000000000004509 76.0
BYD2_k127_1769132_2 Belongs to the methyltransferase superfamily K07444 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 450.0
BYD2_k127_1769132_3 PFAM ABC transporter related K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 397.0
BYD2_k127_1769132_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001117 362.0
BYD2_k127_1769132_5 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 370.0
BYD2_k127_1769132_6 ABC-2 type transporter K09694 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004801 301.0
BYD2_k127_1769132_7 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000003522 272.0
BYD2_k127_1769132_8 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.00000000000000000000000000000000000000000000000000000000000000000006416 241.0
BYD2_k127_1769132_9 lipid kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000008749 221.0
BYD2_k127_1801197_0 Cation transporter/ATPase, N-terminus - - - 0.0 1090.0
BYD2_k127_1801197_1 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 1.466e-247 787.0
BYD2_k127_1801197_10 Belongs to the universal stress protein A family - - - 0.000000133 63.0
BYD2_k127_1801197_11 CoA-binding domain protein K09181 - - 0.000001824 53.0
BYD2_k127_1801197_2 very-long-chain-acyl-CoA dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005782 398.0
BYD2_k127_1801197_3 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003629 366.0
BYD2_k127_1801197_4 (ABC) transporter K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 361.0
BYD2_k127_1801197_5 Formate nitrite K02598,K06212 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000823 267.0
BYD2_k127_1801197_6 ORF6N domain - - - 0.00000000000000000000000000000000000000000000001374 175.0
BYD2_k127_1801197_7 Helix-hairpin-helix domain K04477 - - 0.000000000000000000000000000000000000337 144.0
BYD2_k127_1801197_8 adenylylsulfate kinase activity K00860,K00955 - 2.7.1.25,2.7.7.4 0.000000000000000000000000000002026 137.0
BYD2_k127_1801197_9 CoA binding domain K09181 - - 0.000000000000000000003155 96.0
BYD2_k127_1818248_0 B12 binding domain K00548 - 2.1.1.13 0.0 1641.0
BYD2_k127_1818248_1 ammonium transporter K03320 - - 4.934e-207 656.0
BYD2_k127_1818248_10 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001654 261.0
BYD2_k127_1818248_11 Protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000001688 239.0
BYD2_k127_1818248_12 Belongs to the P(II) protein family K04752 - - 0.00000000000000000000000000000000000000000000000000000001131 199.0
BYD2_k127_1818248_13 helix_turn_helix multiple antibiotic resistance protein - - - 0.000000000000000000000000000000007299 137.0
BYD2_k127_1818248_14 membrane - - - 0.00000000000000000000000000007331 121.0
BYD2_k127_1818248_15 Thioesterase superfamily - - - 0.00000000000000000000000427 106.0
BYD2_k127_1818248_16 Membrane fusogenic activity K09806 - - 0.00000000000000002147 84.0
BYD2_k127_1818248_2 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 569.0
BYD2_k127_1818248_3 Protocatechuate 3,4-dioxygenase K00449 - 1.13.11.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004714 360.0
BYD2_k127_1818248_4 PFAM TrkA-N domain protein K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002358 356.0
BYD2_k127_1818248_5 Mg chelatase subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001745 319.0
BYD2_k127_1818248_6 AMP-binding enzyme C-terminal domain K04110,K20458 - 6.2.1.25,6.2.1.27,6.2.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 310.0
BYD2_k127_1818248_7 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 294.0
BYD2_k127_1818248_8 Catalyzes the cycloisomerization of cis,cis-muconate K01857 - 5.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003254 293.0
BYD2_k127_1818248_9 maleylacetoacetate isomerase K01801 - 5.2.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000005185 271.0
BYD2_k127_1857435_0 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 1.04e-248 780.0
BYD2_k127_1857435_1 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002426 462.0
BYD2_k127_1857435_2 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 337.0
BYD2_k127_1857435_3 PFAM Lytic transglycosylase catalytic - - - 0.00000000000000000000000000000000002549 147.0
BYD2_k127_19188_0 PFAM ABC-1 domain protein K03688 - - 2.626e-220 696.0
BYD2_k127_19188_1 BT1 family - - - 2.002e-211 668.0
BYD2_k127_19188_10 Short-chain dehydrogenase reductase SDR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008158 308.0
BYD2_k127_19188_11 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001548 299.0
BYD2_k127_19188_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007435 263.0
BYD2_k127_19188_13 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000002672 188.0
BYD2_k127_19188_14 MAPEG family - - - 0.000000000000000000000000000000000000000009225 156.0
BYD2_k127_19188_15 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.0000000000000000000000000000000000000008966 161.0
BYD2_k127_19188_17 - - - - 0.000000000005954 74.0
BYD2_k127_19188_18 PFAM PrkA AAA K07180 - - 0.0000000000138 67.0
BYD2_k127_19188_2 3-keto-5-aminohexanoate cleavage protein K18013 - 2.3.1.247 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007258 505.0
BYD2_k127_19188_3 ATP dependent DNA ligase C terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003595 503.0
BYD2_k127_19188_4 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 466.0
BYD2_k127_19188_5 MltA-interacting protein MipA K07274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002558 419.0
BYD2_k127_19188_6 DNA primase, small subunit K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 399.0
BYD2_k127_19188_7 abc transporter K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004195 356.0
BYD2_k127_19188_8 MarR family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 342.0
BYD2_k127_19188_9 KR domain K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 338.0
BYD2_k127_1920600_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 454.0
BYD2_k127_1920600_1 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 384.0
BYD2_k127_1920600_2 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000003125 213.0
BYD2_k127_1920600_3 homocysteine K00547 - 2.1.1.10 0.00000000000000000000000000000000001712 140.0
BYD2_k127_1920600_4 Belongs to the peptidase M48B family K03799 - - 0.000003214 49.0
BYD2_k127_1990924_0 Indolepyruvate ferredoxin oxidoreductase K00179 - 1.2.7.8 7.473e-303 942.0
BYD2_k127_1990924_1 Thiamine pyrophosphate enzyme, C-terminal TPP binding K00179 - 1.2.7.8 5.561e-296 922.0
BYD2_k127_1990924_10 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003151 327.0
BYD2_k127_1990924_11 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 300.0
BYD2_k127_1990924_12 This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits K02931 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 293.0
BYD2_k127_1990924_13 Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body K02988 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002137 279.0
BYD2_k127_1990924_14 Forms part of the polypeptide exit tunnel K02926 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006622 284.0
BYD2_k127_1990924_15 This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center K02933 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001017 261.0
BYD2_k127_1990924_16 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000001266 277.0
BYD2_k127_1990924_17 Cysteine - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001359 262.0
BYD2_k127_1990924_18 Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs K02878 - - 0.0000000000000000000000000000000000000000000000000000000000000000003934 230.0
BYD2_k127_1990924_19 Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome K02948 - - 0.000000000000000000000000000000000000000000000000000000000000000003014 228.0
BYD2_k127_1990924_2 The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently K03076 - - 1.661e-235 733.0
BYD2_k127_1990924_20 Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome K02874 - - 0.000000000000000000000000000000000000000000000000000000000000000503 222.0
BYD2_k127_1990924_21 One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit K02994 - - 0.000000000000000000000000000000000000000000000000000000000009216 209.0
BYD2_k127_1990924_22 Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits K02952 - - 0.0000000000000000000000000000000000000000000000000000009415 194.0
BYD2_k127_1990924_23 Ribosomal protein L17 K02879 - - 0.000000000000000000000000000000000000000000000000000001969 195.0
BYD2_k127_1990924_24 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.000000000000000000000000000000000000000000000000000007831 190.0
BYD2_k127_1990924_25 Involved in the binding of tRNA to the ribosomes K02946 - - 0.0000000000000000000000000000000000000000000000000000299 188.0
BYD2_k127_1990924_26 binds to the 23S rRNA K02876 - - 0.00000000000000000000000000000000000000000000000002018 183.0
BYD2_k127_1990924_27 One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit K02895 - - 0.00000000000000000000000000000000000000000000001513 173.0
BYD2_k127_1990924_28 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 - - 0.000000000000000000000000000000000000000002173 158.0
BYD2_k127_1990924_29 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.00000000000000000000000000000000001638 139.0
BYD2_k127_1990924_3 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006597 549.0
BYD2_k127_1990924_30 This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance K02881 - - 0.0000000000000000000000000000000003929 143.0
BYD2_k127_1990924_31 - - - - 0.000000000000000000000000000000001565 136.0
BYD2_k127_1990924_32 Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site K02954 - - 0.00000000000000000000000000000003298 141.0
BYD2_k127_1990924_33 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000002111 134.0
BYD2_k127_1990924_34 One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA K02961 - - 0.0000000000000000000000001756 117.0
BYD2_k127_1990924_35 Belongs to the universal ribosomal protein uL29 family K02904 - - 0.00000000000000000004402 90.0
BYD2_k127_1990924_36 This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 0.000000000000000008994 82.0
BYD2_k127_1990924_37 Belongs to the bacterial ribosomal protein bL36 family K02919 - - 0.00000000000006908 72.0
BYD2_k127_1990924_38 Ribosomal protein L30 K02907 - - 0.0000000000001136 82.0
BYD2_k127_1990924_4 hydroxypyruvate reductase K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 497.0
BYD2_k127_1990924_5 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 495.0
BYD2_k127_1990924_6 Gentisate 1,2-dioxygenase K00450 - 1.13.11.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004418 465.0
BYD2_k127_1990924_7 Pyruvate ferredoxin/flavodoxin oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005361 460.0
BYD2_k127_1990924_8 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 447.0
BYD2_k127_1990924_9 Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation K02982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002535 331.0
BYD2_k127_2010574_0 Fumarate reductase flavoprotein C-term - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002037 365.0
BYD2_k127_2010574_1 2Fe-2S iron-sulfur cluster binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 347.0
BYD2_k127_2010574_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001846 320.0
BYD2_k127_2010574_3 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 307.0
BYD2_k127_2010574_4 ubiE/COQ5 methyltransferase family K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000003939 254.0
BYD2_k127_2010574_5 Fumarate reductase subunit C - - - 0.0000000000000000000000000000007495 136.0
BYD2_k127_2010574_6 Preprotein translocase subunit SecG K03075 - - 0.0000000000000000000000001375 112.0
BYD2_k127_2010574_7 Fumarate reductase subunit D - - - 0.00000000000000004641 85.0
BYD2_k127_2029309_0 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008934 416.0
BYD2_k127_2029309_1 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003157 284.0
BYD2_k127_2029309_2 Aminoacyl-tRNA editing domain K19055 - - 0.000000000000000000000000000000000000000003116 160.0
BYD2_k127_2029309_3 Bacterial protein of unknown function (DUF883) - - - 0.0000000000000000000002033 100.0
BYD2_k127_2060899_0 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 9.957e-296 925.0
BYD2_k127_2060899_1 NADH pyrophosphatase-like rudimentary NUDIX domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 310.0
BYD2_k127_2060899_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.000000000000000000000000000000000000000000000001003 181.0
BYD2_k127_2060899_3 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.00000000000000000000000000000000000000000000002624 179.0
BYD2_k127_2063822_0 Belongs to the binding-protein-dependent transport system permease family K01997,K01998 - - 5.159e-237 747.0
BYD2_k127_2063822_1 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0000183,GO:0001302,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006139,GO:0006325,GO:0006342,GO:0006348,GO:0006355,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007568,GO:0007569,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016043,GO:0016458,GO:0016874,GO:0016879,GO:0018130,GO:0019219,GO:0019222,GO:0019357,GO:0019358,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032502,GO:0034641,GO:0034654,GO:0040029,GO:0043094,GO:0043173,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0045814,GO:0045892,GO:0045934,GO:0046483,GO:0046497,GO:0048519,GO:0048523,GO:0048869,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051252,GO:0051253,GO:0051276,GO:0055086,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072524,GO:0072525,GO:0080090,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.3.4.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 586.0
BYD2_k127_2063822_10 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000008619 258.0
BYD2_k127_2063822_11 Belongs to the SOS response-associated peptidase family - - - 0.0000000000000000000000000000000000000000000000007467 182.0
BYD2_k127_2063822_12 Psort location CytoplasmicMembrane, score K12132 - 2.7.11.1 0.0000000000000000000000000000000000000009318 155.0
BYD2_k127_2063822_13 cheY-homologous receiver domain - - - 0.000000000000000000000000000000142 127.0
BYD2_k127_2063822_14 Evidence 4 Homologs of previously reported genes of - - - 0.0000000000000000000003604 108.0
BYD2_k127_2063822_2 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002665 554.0
BYD2_k127_2063822_3 Permeases of the major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003082 381.0
BYD2_k127_2063822_4 Acetyl-CoA hydrolase/transferase N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004942 362.0
BYD2_k127_2063822_5 Dimerisation domain of Zinc Transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005456 342.0
BYD2_k127_2063822_6 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 312.0
BYD2_k127_2063822_7 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 322.0
BYD2_k127_2063822_8 ATPases associated with a variety of cellular activities K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001572 268.0
BYD2_k127_2063822_9 COG2202 FOG PAS PAC domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002175 284.0
BYD2_k127_2091991_0 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003119 393.0
BYD2_k127_2091991_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 296.0
BYD2_k127_2091991_2 cell division K09812 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 297.0
BYD2_k127_2091991_3 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005737 265.0
BYD2_k127_2091991_4 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.000000000000000000000000000000000000000000000000000000000000000007549 232.0
BYD2_k127_2091991_5 RNA methyltransferase, RsmD family - - - 0.000000000000000000000000000000000000000000000000008542 188.0
BYD2_k127_2091991_6 RNA polymerase sigma K03089 - - 0.0000000000000000000000000000000000000000000000452 172.0
BYD2_k127_2098095_0 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007094 464.0
BYD2_k127_2098095_1 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003451 432.0
BYD2_k127_2098095_2 Binding-protein-dependent transport system inner membrane component K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005253 401.0
BYD2_k127_2098095_3 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001977 387.0
BYD2_k127_2098095_4 DNA helicase K03657 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004603 364.0
BYD2_k127_2098095_5 Transcriptional regulatory protein, C terminal K07657 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 341.0
BYD2_k127_2098095_6 Plays a role in the regulation of phosphate uptake K02039 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001825 289.0
BYD2_k127_2105804_0 RQC K03654 - 3.6.4.12 1.107e-245 769.0
BYD2_k127_2105804_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003545 512.0
BYD2_k127_2105804_10 PFAM Cytochrome c, class I - - - 0.0000000000000000000000000000001947 127.0
BYD2_k127_2105804_2 UPF0365 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 506.0
BYD2_k127_2105804_3 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005921 483.0
BYD2_k127_2105804_4 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007433 432.0
BYD2_k127_2105804_5 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 329.0
BYD2_k127_2105804_6 metal-dependent hydrolase of the TIM-barrel fold K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008382 313.0
BYD2_k127_2105804_7 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002881 273.0
BYD2_k127_2105804_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000005885 224.0
BYD2_k127_2105804_9 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000001185 140.0
BYD2_k127_2133241_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.257e-240 756.0
BYD2_k127_2133241_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001483 608.0
BYD2_k127_2133241_2 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007361 525.0
BYD2_k127_2133241_3 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.00000000000000000000000000000000000000000000000000000000000000000000001681 250.0
BYD2_k127_2133241_4 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03767,K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000002031 243.0
BYD2_k127_2133241_5 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000006391 151.0
BYD2_k127_2133241_6 colicin v production K03558 - - 0.0000000000000003663 81.0
BYD2_k127_2133241_7 ErfK YbiS YcfS YnhG family protein - - - 0.0000003431 52.0
BYD2_k127_2133241_8 Pfam Amidohydrolase - - - 0.00000418 49.0
BYD2_k127_2145054_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0 1085.0
BYD2_k127_2145054_1 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 3.498e-237 739.0
BYD2_k127_2145054_2 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) K00800 - 2.5.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 553.0
BYD2_k127_2145054_3 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 509.0
BYD2_k127_2145054_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002599 448.0
BYD2_k127_2145054_5 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002011 415.0
BYD2_k127_2145054_6 chorismate mutase K14170 - 4.2.1.51,5.4.99.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000171 405.0
BYD2_k127_2145054_7 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.00000000000000000000000000000000000000000000000000000000000000000000006243 248.0
BYD2_k127_2145054_8 Prephenate dehydrogenase K00210,K04517 - 1.3.1.12 0.00000000000000000000000000000000000000000000000000000000000005063 237.0
BYD2_k127_2166591_0 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004954 535.0
BYD2_k127_2166591_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001642 508.0
BYD2_k127_2166591_2 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003759 364.0
BYD2_k127_2166591_3 carboxylic acid catabolic process K01856 - 5.5.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001142 285.0
BYD2_k127_2166591_4 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000001644 220.0
BYD2_k127_2166591_5 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000001563 192.0
BYD2_k127_2166591_6 PIN domain - - - 0.0000000000000000009054 97.0
BYD2_k127_2166591_7 positive regulation of growth - GO:0006417,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0034248,GO:0034250,GO:0040007,GO:0045727,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0080090,GO:2000112 - 0.000000001123 62.0
BYD2_k127_2173415_0 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 552.0
BYD2_k127_2173415_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 554.0
BYD2_k127_2173415_10 VacJ family lipoprotein K04754 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006753 256.0
BYD2_k127_2173415_11 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000000000000002056 222.0
BYD2_k127_2173415_12 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000008929 217.0
BYD2_k127_2173415_13 imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000002568 130.0
BYD2_k127_2173415_14 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000003636 115.0
BYD2_k127_2173415_2 Type II and III secretion system protein K02453 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002282 515.0
BYD2_k127_2173415_3 Permease MlaE K02066 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001168 402.0
BYD2_k127_2173415_4 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 405.0
BYD2_k127_2173415_5 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003517 395.0
BYD2_k127_2173415_6 ABC-type transport system involved in resistance to organic solvents, ATPase component K02065 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008824 364.0
BYD2_k127_2173415_7 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000142 311.0
BYD2_k127_2173415_8 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001247 291.0
BYD2_k127_2173415_9 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003972 268.0
BYD2_k127_2206512_0 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214,K02438 - 3.2.1.196,3.2.1.68 0.0 1088.0
BYD2_k127_2206512_1 Tripartite tricarboxylate transporter TctA family K07793 - - 1.535e-223 711.0
BYD2_k127_2206512_10 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000008439 138.0
BYD2_k127_2206512_12 Staphylococcal nuclease homologue - - - 0.0000000000007879 72.0
BYD2_k127_2206512_14 PEP-CTERM motif - - - 0.0007487 49.0
BYD2_k127_2206512_2 AMP-binding enzyme K01895 - 6.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003069 586.0
BYD2_k127_2206512_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 445.0
BYD2_k127_2206512_4 PFAM Amino acid permease K03294 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001309 421.0
BYD2_k127_2206512_5 Transcriptional regulator K04761 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006083 381.0
BYD2_k127_2206512_6 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 375.0
BYD2_k127_2206512_7 AIR synthase related protein, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005297 254.0
BYD2_k127_2206512_8 Mycolic acid cyclopropane synthetase - - - 0.00000000000000000000000000000000000000000000000000004925 198.0
BYD2_k127_2206512_9 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000004306 200.0
BYD2_k127_2250383_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 3.884e-211 666.0
BYD2_k127_2250383_1 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009145 477.0
BYD2_k127_2250383_2 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009868 481.0
BYD2_k127_2250383_3 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002956 302.0
BYD2_k127_2250383_4 Belongs to the DnaA family K10763 - - 0.0000000000000000000000000000000000000000000004046 179.0
BYD2_k127_2250383_5 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.00000000000000000000000000000000000000000004472 177.0
BYD2_k127_2270497_0 Bifunctional transglycosylase second domain K05365 - 2.4.1.129,3.4.16.4 7.721e-285 893.0
BYD2_k127_2270497_1 PFAM alanine racemase domain protein K20757 - 4.3.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 444.0
BYD2_k127_2270497_10 Protein of unknown function (DUF3618) - - - 0.00000000000000000000000000000000000000001064 163.0
BYD2_k127_2270497_11 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000003107 156.0
BYD2_k127_2270497_12 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000003523 156.0
BYD2_k127_2270497_13 Protein of unknown function (DUF2892) - - - 0.0000000000000000000000000000000000000006341 152.0
BYD2_k127_2270497_14 Domain of unknown function (DUF427) - - - 0.00000000000000000000000000000000000007046 149.0
BYD2_k127_2270497_15 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000000000000000000000001597 113.0
BYD2_k127_2270497_16 Tetratricopeptide repeat - - - 0.0000000000000001035 85.0
BYD2_k127_2270497_17 - - - - 0.00000000000146 76.0
BYD2_k127_2270497_18 translation initiation factor activity - - - 0.00007813 49.0
BYD2_k127_2270497_2 exo-alpha-(2->6)-sialidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007804 392.0
BYD2_k127_2270497_3 Virulence factor BrkB K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002086 358.0
BYD2_k127_2270497_4 Ion transport protein K10716 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 290.0
BYD2_k127_2270497_5 Belongs to the UPF0502 family K09915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003718 278.0
BYD2_k127_2270497_6 haloacid dehalogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005745 251.0
BYD2_k127_2270497_7 Protein of unknown function (DUF1428) - - - 0.00000000000000000000000000000000000000000000000001215 182.0
BYD2_k127_2270497_8 PFAM Glyoxalase bleomycin resistance protein dioxygenase K08234 - - 0.0000000000000000000000000000000000000000000001482 173.0
BYD2_k127_2270497_9 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000006245 175.0
BYD2_k127_2283898_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1349.0
BYD2_k127_2283898_1 penicillin-binding protein 1A K05366 - 2.4.1.129,3.4.16.4 3.867e-311 971.0
BYD2_k127_2283898_10 Shikimate kinase K00891 - 2.7.1.71 0.000000000000000000000000000000000000000000000000000000000000008109 224.0
BYD2_k127_2283898_11 fimbrial biogenesis protein PilN K02663 - - 0.000000000000000000000000000000000000000000000000000000001221 209.0
BYD2_k127_2283898_12 pilus assembly protein PilP K02665 - - 0.0000000000000000000000000000000000000001423 156.0
BYD2_k127_2283898_13 Belongs to the frataxin K06202 - - 0.0000000000000000000000000000000007674 141.0
BYD2_k127_2283898_2 type II and III secretion system protein K02666 - - 1.313e-240 773.0
BYD2_k127_2283898_3 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 4.921e-206 652.0
BYD2_k127_2283898_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003045 494.0
BYD2_k127_2283898_5 Pilus assembly protein K02662 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000709 475.0
BYD2_k127_2283898_6 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007151 421.0
BYD2_k127_2283898_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003948 295.0
BYD2_k127_2283898_8 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003521 247.0
BYD2_k127_2283898_9 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000000000000001382 238.0
BYD2_k127_2287599_0 Acyl-CoA dehydrogenase, C-terminal domain - - - 1.661e-205 658.0
BYD2_k127_2287599_1 Pyridine nucleotide-disulphide oxidoreductase K07222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007534 572.0
BYD2_k127_2287599_10 Domain of unknown function (DUF4393) - - - 0.000003361 53.0
BYD2_k127_2287599_11 - - - - 0.00008419 48.0
BYD2_k127_2287599_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 569.0
BYD2_k127_2287599_3 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008343 452.0
BYD2_k127_2287599_4 OsmC-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004404 296.0
BYD2_k127_2287599_5 Transcriptional regulatory protein, C terminal K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002003 277.0
BYD2_k127_2287599_6 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 GO:0000334,GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0044237,GO:0044248,GO:0051213,GO:0055114 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000005677 231.0
BYD2_k127_2287599_7 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000006568 237.0
BYD2_k127_2287599_8 Fumarylacetoacetate (FAA) hydrolase family K01617 - 4.1.1.77 0.00000000000000000000000000000000000000000000000001872 194.0
BYD2_k127_2287599_9 Protein of unknown function (DUF1178) - - - 0.000000000000000000000000000000009958 132.0
BYD2_k127_2314865_0 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K03841 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005984,GO:0005985,GO:0005986,GO:0005996,GO:0006000,GO:0006002,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009058,GO:0009311,GO:0009312,GO:0009987,GO:0016043,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0019318,GO:0019319,GO:0019637,GO:0022607,GO:0030388,GO:0034637,GO:0042132,GO:0042578,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046351,GO:0046364,GO:0050308,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0065003,GO:0071704,GO:0071840,GO:1901135,GO:1901576 3.1.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006856 486.0
BYD2_k127_2314865_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007451 499.0
BYD2_k127_2314865_10 CoA-binding domain protein K09181 - - 0.0000000000000001071 86.0
BYD2_k127_2314865_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001709 449.0
BYD2_k127_2314865_3 Phosphotransferase enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007298 349.0
BYD2_k127_2314865_4 major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 302.0
BYD2_k127_2314865_5 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000001213 248.0
BYD2_k127_2314865_6 Two component transcriptional regulator, winged helix family K02483,K07772 - - 0.00000000000000000000000000000000000000000000000000000000000001209 224.0
BYD2_k127_2314865_7 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000113 197.0
BYD2_k127_2314865_8 Globin - - - 0.000000000000000000000000000000000000000002267 161.0
BYD2_k127_2314865_9 SWI complex, BAF60b domains - - - 0.0000000000000000000000000000000001178 134.0
BYD2_k127_2470304_0 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 1.268e-262 821.0
BYD2_k127_2470304_1 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 5.291e-196 622.0
BYD2_k127_2470304_10 Enoyl-(Acyl carrier protein) reductase K03793 - 1.5.1.33 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 289.0
BYD2_k127_2470304_11 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001125 304.0
BYD2_k127_2470304_12 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006443 285.0
BYD2_k127_2470304_13 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000354 257.0
BYD2_k127_2470304_14 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001146 227.0
BYD2_k127_2470304_15 RES domain - - - 0.0000000000000000000000000000000000000000003354 166.0
BYD2_k127_2470304_16 Protein of unknown function (DUF2384) - - - 0.000000000000000000000000000000003319 132.0
BYD2_k127_2470304_17 PFAM small multidrug resistance protein K11741 - - 0.0000000000000000000000000000000037 141.0
BYD2_k127_2470304_18 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.000000000000000000000000000135 128.0
BYD2_k127_2470304_19 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000000000000000002714 105.0
BYD2_k127_2470304_2 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 613.0
BYD2_k127_2470304_20 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000001572 67.0
BYD2_k127_2470304_3 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 409.0
BYD2_k127_2470304_4 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007 383.0
BYD2_k127_2470304_5 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002239 363.0
BYD2_k127_2470304_6 PFAM Extradiol ring-cleavage dioxygenase, class III K04101 - 1.13.11.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002452 361.0
BYD2_k127_2470304_7 membrane-bound metal-dependent K07038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000827 329.0
BYD2_k127_2470304_8 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 286.0
BYD2_k127_2470304_9 Protein of unknown function (DUF3750) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 291.0
BYD2_k127_2487346_0 DNA ligase K01971 - 6.5.1.1 0.0 1252.0
BYD2_k127_2487346_1 Tripartite tricarboxylate transporter TctA family - - - 2.835e-223 711.0
BYD2_k127_2487346_2 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008073 432.0
BYD2_k127_2487346_3 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 351.0
BYD2_k127_2487346_4 Belongs to the ompA family K20276 - - 0.00000000000000000000003152 100.0
BYD2_k127_2598529_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 5.593e-223 710.0
BYD2_k127_2598529_1 Arginyl-tRNA synthetase K01887 - 6.1.1.19 5.837e-216 700.0
BYD2_k127_2598529_10 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.00000000000000000000000000004037 120.0
BYD2_k127_2598529_11 TonB-dependent Receptor Plug Domain K02014 - - 0.00000000000000000000008092 101.0
BYD2_k127_2598529_12 - - - - 0.000000001756 60.0
BYD2_k127_2598529_2 poly(R)-hydroxyalkanoic acid synthase K03821 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001387 541.0
BYD2_k127_2598529_3 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004664 473.0
BYD2_k127_2598529_4 Domain of unknown function (DUF4143) K07133 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 438.0
BYD2_k127_2598529_5 ABC-type Fe3 -hydroxamate transport system, periplasmic component K02016 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003339 279.0
BYD2_k127_2598529_6 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001209 267.0
BYD2_k127_2598529_7 EVE domain - - - 0.00000000000000000000000000000000000000000000000000000000000000009562 225.0
BYD2_k127_2598529_8 Thiol disulfide interchange protein K03673 - - 0.0000000000000000000000000000000000000000000000051 190.0
BYD2_k127_2598529_9 cell division protein - - - 0.000000000000000000000000000000000000000001058 165.0
BYD2_k127_2615443_0 Amidohydrolase family - - - 1.572e-221 700.0
BYD2_k127_2615443_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005289 541.0
BYD2_k127_2615443_10 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000007555 141.0
BYD2_k127_2615443_11 TfoX N-terminal domain - - - 0.000000000000000000000000000003289 129.0
BYD2_k127_2615443_12 Domain of unknown function (DUF4440) - - - 0.00000000000001418 87.0
BYD2_k127_2615443_2 Methionine synthase K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 488.0
BYD2_k127_2615443_3 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004003 390.0
BYD2_k127_2615443_4 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001123 352.0
BYD2_k127_2615443_5 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain K12972 - 1.1.1.79,1.1.1.81 0.000000000000000000000000000000000000000000000000000000000000000000000000000009383 271.0
BYD2_k127_2615443_6 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002306 267.0
BYD2_k127_2615443_7 KR domain K13774 - - 0.0000000000000000000000000000000000000000000000000000000000225 213.0
BYD2_k127_2615443_8 [2Fe-2S] binding domain K18029 - 1.17.2.1 0.000000000000000000000000000000000000000000000004148 187.0
BYD2_k127_2615443_9 Polymer-forming cytoskeletal - - - 0.00000000000000000000000000000000000000007216 157.0
BYD2_k127_2620898_0 AcrB/AcrD/AcrF family - - - 0.0 1250.0
BYD2_k127_2620898_1 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006199 300.0
BYD2_k127_2620898_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001409 262.0
BYD2_k127_2620898_3 Sulfatase-modifying factor enzyme 1 K11912 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000005256 248.0
BYD2_k127_2620898_4 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000004916 234.0
BYD2_k127_2620898_5 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.0000000000000000000000000000000000000000000000000008152 184.0
BYD2_k127_2620898_6 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000006386 166.0
BYD2_k127_2620898_7 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000001302 111.0
BYD2_k127_27005_0 COG0365 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases K08295 - 6.2.1.32 1.109e-236 743.0
BYD2_k127_27005_1 2-hydroxyglutaryl-CoA dehydratase, D-component K04113 - 1.3.7.8 2.035e-207 660.0
BYD2_k127_27005_10 ferredoxin - - - 0.00000000000000000000000000000000004278 135.0
BYD2_k127_27005_11 - - - - 0.0002689 46.0
BYD2_k127_27005_2 Benzoyl-CoA reductase subunit K04114 - 1.3.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000225 580.0
BYD2_k127_27005_3 2-hydroxyglutaryl-CoA dehydratase, D-component K04112 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007435 549.0
BYD2_k127_27005_4 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 461.0
BYD2_k127_27005_5 Enoyl-CoA hydratase/isomerase K07539 - 3.7.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001355 453.0
BYD2_k127_27005_6 Amidohydrolase K10220 - 4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 393.0
BYD2_k127_27005_7 BadF/BadG/BcrA/BcrD ATPase family K04115 - 1.3.7.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 366.0
BYD2_k127_27005_8 KR domain K07535 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006645 326.0
BYD2_k127_27005_9 Enoyl-CoA hydratase/isomerase K07537 - 4.2.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 311.0
BYD2_k127_2772368_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000455 579.0
BYD2_k127_2772368_1 Belongs to the heme-copper respiratory oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000007129 260.0
BYD2_k127_2772368_2 Acetyltransferase (GNAT) family - - - 0.00000000000000000000000000000000000000000000000003793 190.0
BYD2_k127_2772368_3 Hemerythrin HHE cation binding domain - - - 0.0000000000000000003293 95.0
BYD2_k127_2800023_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 8.633e-299 925.0
BYD2_k127_2800023_1 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 595.0
BYD2_k127_2800023_2 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003534 371.0
BYD2_k127_2800023_3 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001422 316.0
BYD2_k127_2800023_4 negative regulator of sigma E activity K03598 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003273 258.0
BYD2_k127_2800023_5 PFAM glutaredoxin 2 - - - 0.00000000000003071 78.0
BYD2_k127_2800023_6 Anti sigma-E protein RseA, N-terminal domain K03597 - - 0.0000000000001643 76.0
BYD2_k127_2845016_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 2.164e-274 859.0
BYD2_k127_2845016_1 4Fe-4S dicluster domain - - - 6.466e-264 818.0
BYD2_k127_2845016_2 Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source K02224 - 6.3.5.11,6.3.5.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002273 594.0
BYD2_k127_2845016_3 PFAM Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 503.0
BYD2_k127_2845016_4 Nitrate reductase gamma subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002565 351.0
BYD2_k127_2845016_5 PFAM 4Fe-4S ferredoxin iron-sulfur binding domain protein K00184 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006991 335.0
BYD2_k127_2845016_6 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000004829 159.0
BYD2_k127_2845016_7 Histidine kinase K07673 - 2.7.13.3 0.0000000000000000000000000000000000000008682 155.0
BYD2_k127_2845016_8 Belongs to the HesB IscA family K13628 - - 0.000000000000000000000000162 112.0
BYD2_k127_2845016_9 - - - - 0.0000000000000000000001298 106.0
BYD2_k127_2880787_0 Putative diguanylate phosphodiesterase - - - 1.8e-208 676.0
BYD2_k127_2880787_1 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000004683 243.0
BYD2_k127_2880787_2 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000001786 229.0
BYD2_k127_2880787_3 deoxyhypusine monooxygenase activity K05384,K05386 - - 0.0000000000000000000000000000000000000000000000002679 184.0
BYD2_k127_2880787_4 COG0457 FOG TPR repeat - - - 0.0000000000000000000002465 105.0
BYD2_k127_2918604_0 Belongs to the peptidase S16 family K04770 - - 8.447e-231 752.0
BYD2_k127_2918604_1 DNA polymerase X family K02347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005004 599.0
BYD2_k127_2918604_10 Belongs to the universal stress protein A family - - - 0.0003288 50.0
BYD2_k127_2918604_2 Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP K00763 GO:0001666,GO:0003674,GO:0003824,GO:0004516,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009605,GO:0009607,GO:0009628,GO:0009987,GO:0016020,GO:0016740,GO:0016757,GO:0016763,GO:0016874,GO:0016879,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0034355,GO:0034641,GO:0034654,GO:0036293,GO:0043094,GO:0043173,GO:0043207,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044403,GO:0044419,GO:0044464,GO:0046483,GO:0046496,GO:0047280,GO:0050896,GO:0051186,GO:0051188,GO:0051701,GO:0051704,GO:0051707,GO:0055086,GO:0070482,GO:0071704,GO:0071944,GO:0072524,GO:0072525,GO:0075136,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001442 456.0
BYD2_k127_2918604_3 phosphoribosyltransferase K07100 - - 0.0000000000000000000000000000000001135 142.0
BYD2_k127_2918604_4 GYD domain - - - 0.0000000000000000000000000000000004218 133.0
BYD2_k127_2918604_5 SNARE associated Golgi protein - - - 0.000000000000000000000000000224 129.0
BYD2_k127_2918604_6 - - - - 0.0000000000000000000866 97.0
BYD2_k127_2918604_7 - - - - 0.00000000000000002793 85.0
BYD2_k127_2918604_8 - - - - 0.0000000000000002992 79.0
BYD2_k127_2918604_9 Universal stress protein - - - 0.00000001452 64.0
BYD2_k127_2940348_0 Alpha/beta hydrolase family K01561 - 3.8.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002721 398.0
BYD2_k127_2940348_1 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K19707 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001996 346.0
BYD2_k127_2940348_2 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 338.0
BYD2_k127_2940348_3 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) K02351 - - 0.000000000000000000000000000000000000000000000000000000002112 208.0
BYD2_k127_2940348_4 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.00000000000000000000000000000000000000000000000000000008383 198.0
BYD2_k127_2940348_5 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000005714 180.0
BYD2_k127_2940348_7 2Fe-2S iron-sulfur cluster binding domain - - - 0.00000009747 57.0
BYD2_k127_2956129_0 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004925 277.0
BYD2_k127_2956129_1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00046,K00065 - 1.1.1.127,1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000194 267.0
BYD2_k127_2956129_2 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000003103 243.0
BYD2_k127_2956129_3 Transglycosylase associated protein - - - 0.0000000000000000000000000000000001711 134.0
BYD2_k127_2970946_0 Dehydrogenase E1 component K00164 - 1.2.4.2 0.0 1351.0
BYD2_k127_2970946_1 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 3.315e-254 802.0
BYD2_k127_2970946_10 Dehydrogenase K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.0000000000006623 70.0
BYD2_k127_2970946_11 Flavinator of succinate dehydrogenase K09159 - - 0.000000000144 72.0
BYD2_k127_2970946_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 2.73e-225 704.0
BYD2_k127_2970946_3 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007761 530.0
BYD2_k127_2970946_4 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000205 476.0
BYD2_k127_2970946_5 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001126 403.0
BYD2_k127_2970946_6 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K01841,K03417 - 4.1.3.30,5.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000491 277.0
BYD2_k127_2970946_7 Succinate dehydrogenase hydrophobic membrane anchor protein K00242 - - 0.00000000000000000000000000000000000001638 148.0
BYD2_k127_2970946_8 COG2009 Succinate dehydrogenase fumarate reductase, cytochrome b subunit K00241 - - 0.0000000000000000000000000000001734 128.0
BYD2_k127_2970946_9 PspC domain - - - 0.0000000000000000000000000005433 117.0
BYD2_k127_2982321_0 4Fe-4S binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 505.0
BYD2_k127_2982321_1 PFAM Extracellular ligand-binding receptor K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000622 477.0
BYD2_k127_2982321_2 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001269 409.0
BYD2_k127_2982321_3 4Fe-4S binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 396.0
BYD2_k127_2982321_4 PFAM ABC transporter related K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001944 350.0
BYD2_k127_2982321_5 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 355.0
BYD2_k127_2982321_6 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000009244 242.0
BYD2_k127_2982321_7 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000006995 109.0
BYD2_k127_2990135_0 Uncharacterized ACR, YdiU/UPF0061 family - - - 2.223e-217 687.0
BYD2_k127_2990135_1 Protein of unknown function (DUF3604) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 557.0
BYD2_k127_2990135_10 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 321.0
BYD2_k127_2990135_11 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 310.0
BYD2_k127_2990135_12 Arylsulfotransferase (ASST) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 311.0
BYD2_k127_2990135_13 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001162 287.0
BYD2_k127_2990135_14 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008425 284.0
BYD2_k127_2990135_15 Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB) K01856 - 5.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000002728 275.0
BYD2_k127_2990135_16 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003863 254.0
BYD2_k127_2990135_17 PFAM regulatory protein TetR - - - 0.000000000000000000000000000000000000000000000000000000000000000000305 236.0
BYD2_k127_2990135_18 Protein of unknown function (DUF1328) - - - 0.000000000005436 67.0
BYD2_k127_2990135_19 Carbon monoxide dehydrogenase subunit G (CoxG) - - - 0.00000001146 68.0
BYD2_k127_2990135_2 Dihydrodipicolinate synthetase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 486.0
BYD2_k127_2990135_20 - - - - 0.0000000129 64.0
BYD2_k127_2990135_3 NAD dependent epimerase/dehydratase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 462.0
BYD2_k127_2990135_4 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008804 416.0
BYD2_k127_2990135_5 alcohol dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002114 397.0
BYD2_k127_2990135_6 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 382.0
BYD2_k127_2990135_7 ABC transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002849 369.0
BYD2_k127_2990135_8 Flavin containing amine oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000868 364.0
BYD2_k127_2990135_9 Peptidase dimerisation domain K01438,K01439 - 3.5.1.16,3.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004978 342.0
BYD2_k127_2992706_0 Transport of potassium into the cell K03549 - - 2.506e-267 837.0
BYD2_k127_2992706_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002482 343.0
BYD2_k127_2992706_2 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 305.0
BYD2_k127_2992706_3 ABC-3 protein K02075 - - 0.00000000000000000000002263 103.0
BYD2_k127_3022353_0 Catalytic subunit of the nitrate reductase (NAP). Only expressed at high levels during aerobic growth. NapAB complex receives electrons from the membrane-anchored tetraheme protein NapC. Essential function for nitrate assimilation and may have a role in anaerobic metabolism K02567 - - 0.0 1334.0
BYD2_k127_3022353_1 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 5.529e-220 702.0
BYD2_k127_3022353_10 Heavy-metal-associated domain - - - 0.0000006119 60.0
BYD2_k127_3022353_2 Cytochrome c-type protein K02569 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005858 333.0
BYD2_k127_3022353_3 Receptor family ligand binding region K01999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 313.0
BYD2_k127_3022353_4 Electron transfer subunit of the periplasmic nitrate reductase complex NapAB K02568 - - 0.000000000000000000000000000000000000000001961 166.0
BYD2_k127_3022353_5 Acetyltransferase (GNAT) family - - - 0.000000000000000000000000000000000002215 142.0
BYD2_k127_3022353_6 Invasion gene expression up-regulator SirB - - - 0.00000000000000000000000000000001096 137.0
BYD2_k127_3022353_7 transcriptional regulator - - - 0.000000000000000000000000000007978 127.0
BYD2_k127_3022353_8 Thioesterase - - - 0.000000000000000000002299 96.0
BYD2_k127_3022353_9 Periplasmic nitrate reductase protein NapE K02571 - - 0.00000001507 66.0
BYD2_k127_3031098_0 Domain of unknown function (DUF3482) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008386 436.0
BYD2_k127_3031098_1 Protein of unknown function (DUF2868) - - - 0.0000000000000000000000000000000000000000000000000000000000000004943 237.0
BYD2_k127_3031098_2 Domain of unknown function (DUF1330) - - - 0.00000000000000000000000000000000000000000000000000002179 188.0
BYD2_k127_3031098_3 DDE domain - - - 0.000000000000000000000000000000000000000000000003133 177.0
BYD2_k127_3031098_4 HTH-like domain K07497 - - 0.000000000000000000000004051 106.0
BYD2_k127_3046742_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 1.727e-306 962.0
BYD2_k127_3046742_1 Methionine aminopeptidase K01265 - 3.4.11.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 419.0
BYD2_k127_3046742_2 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005353 392.0
BYD2_k127_3046742_3 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003316 368.0
BYD2_k127_3046742_4 Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage K00772 - 2.4.2.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003937 341.0
BYD2_k127_3046742_5 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000008202 249.0
BYD2_k127_3046742_6 Psort location Cytoplasmic, score 9.97 K00760 - 2.4.2.8 0.000000000000000000000000000000000000000000000000000000000000006033 224.0
BYD2_k127_3046742_7 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.0000000000000000000000000000000000000000000000000008712 188.0
BYD2_k127_3047018_0 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 1.21e-281 886.0
BYD2_k127_3047018_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001504 522.0
BYD2_k127_3047018_2 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001152 255.0
BYD2_k127_3047018_3 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.0000000000000000000000000000000000000000000000000001157 191.0
BYD2_k127_3047018_4 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000000003336 187.0
BYD2_k127_3047018_5 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000001769 175.0
BYD2_k127_3047018_6 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 0.00000000000000000000000000000000000000000000002148 172.0
BYD2_k127_3047018_7 Belongs to the bacterial ribosomal protein bL35 family K02916 - - 0.0000000000000000001416 91.0
BYD2_k127_3056060_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 1.801e-234 733.0
BYD2_k127_3056060_1 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 539.0
BYD2_k127_3056060_2 trisaccharide binding - - - 0.0000000000000000000000000000000000000000000000000000000000000007163 231.0
BYD2_k127_3058226_0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster - - - 8.25e-222 701.0
BYD2_k127_3058226_1 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases K00174 - 1.2.7.11,1.2.7.3 3.79e-213 691.0
BYD2_k127_3058226_10 Cytochrome C oxidase, cbb3-type, subunit III K19344 - - 0.0000000000000000000000000000004061 125.0
BYD2_k127_3058226_11 electron transfer activity K03737,K05337 - 1.2.7.1 0.0002261 54.0
BYD2_k127_3058226_2 B12 binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009867 582.0
BYD2_k127_3058226_3 cytochrome d1, heme region K19345 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 512.0
BYD2_k127_3058226_4 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001979 496.0
BYD2_k127_3058226_5 2 iron, 2 sulfur cluster binding K00266,K00528,K02823 - 1.18.1.2,1.19.1.1,1.4.1.13,1.4.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008147 453.0
BYD2_k127_3058226_6 COG1522 Transcriptional regulators - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001281 329.0
BYD2_k127_3058226_7 COG1013 Pyruvate ferredoxin oxidoreductase and related 2-oxoacid ferredoxin oxidoreductases, beta subunit K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000159 322.0
BYD2_k127_3058226_8 oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000004142 260.0
BYD2_k127_3058226_9 overlaps another CDS with the same product name - - - 0.0000000000000000000000000000000000000000005636 168.0
BYD2_k127_3090940_0 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001553 492.0
BYD2_k127_3090940_1 Pyruvate carboxyltransferase K01640 - 4.1.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002478 384.0
BYD2_k127_3090940_2 Haem-degrading - - - 0.0000000000000000000000000000000000000000000000000000000000000000008424 231.0
BYD2_k127_3090940_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000003965 156.0
BYD2_k127_3090940_4 protein possibly involved in utilization of glycolate and propanediol K11477 - - 0.00000000000002618 74.0
BYD2_k127_3128825_0 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1189.0
BYD2_k127_3128825_1 TIGRFAM isocitrate dehydrogenase, NADP-dependent K00031 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.42 8.099e-226 705.0
BYD2_k127_3128825_10 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 285.0
BYD2_k127_3128825_11 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000252 257.0
BYD2_k127_3128825_12 Urate oxidase N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003492 245.0
BYD2_k127_3128825_13 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.000000000000000000000000000000000000000000000000000000000000005503 219.0
BYD2_k127_3128825_14 TraB family K09973 - - 0.00000000000000000000000000000000000000000000000001867 192.0
BYD2_k127_3128825_15 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.00000000000000000000000000000000000000000004301 166.0
BYD2_k127_3128825_16 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000000000000000002457 162.0
BYD2_k127_3128825_17 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000005764 140.0
BYD2_k127_3128825_18 Cold shock protein K03704 - - 0.00000000000000000000000000000000006365 136.0
BYD2_k127_3128825_19 - - - - 0.00000000000000000000000000000005808 130.0
BYD2_k127_3128825_2 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 2.492e-222 698.0
BYD2_k127_3128825_20 Ribosomal L28 family K02902 - - 0.0000000000000000000000000001628 118.0
BYD2_k127_3128825_21 Cytochrome c, class I - - - 0.000000000000000000000000001257 115.0
BYD2_k127_3128825_22 Belongs to the bacterial ribosomal protein bL33 family K02913 - - 0.00000000000000000002763 95.0
BYD2_k127_3128825_23 Protein of unknown function (DUF3108) - - - 0.00005426 53.0
BYD2_k127_3128825_3 PFAM fatty acid desaturase K00507 - 1.14.19.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000563 534.0
BYD2_k127_3128825_4 Flavocytochrome c sulphide dehydrogenase, flavin-binding K17218 - 1.8.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 522.0
BYD2_k127_3128825_5 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001359 474.0
BYD2_k127_3128825_6 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003337 434.0
BYD2_k127_3128825_7 FAD binding K11472 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005853 421.0
BYD2_k127_3128825_8 membrane transporter protein K07090 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 372.0
BYD2_k127_3128825_9 Belongs to the hyi family K01816,K22131 - 5.3.1.22,5.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006628 316.0
BYD2_k127_3162021_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1039.0
BYD2_k127_3162021_1 PFAM aminotransferase class I and II K00832 - 2.6.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006248 522.0
BYD2_k127_3173563_0 Competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006977 577.0
BYD2_k127_3173563_1 Sodium hydrogen exchanger K11105 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008612 489.0
BYD2_k127_3173563_2 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.000000000000000000000000000000000000000000000000002547 188.0
BYD2_k127_3173563_3 Universal stress protein family - - - 0.0000000000000000000000000000000000000003595 160.0
BYD2_k127_3173563_4 - - - - 0.00003167 49.0
BYD2_k127_3244465_0 Oligopeptide/dipeptide transporter, C-terminal region K15583 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001896 464.0
BYD2_k127_3244465_1 Belongs to the ABC transporter superfamily K10823 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001481 286.0
BYD2_k127_3244465_2 Aminotransferase class-V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000007375 258.0
BYD2_k127_3275846_0 COG0526, thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006955 526.0
BYD2_k127_3275846_1 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001778 246.0
BYD2_k127_3275846_10 - - - - 0.0000002628 55.0
BYD2_k127_3275846_2 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000006272 183.0
BYD2_k127_3275846_3 3-Demethylubiquinone-9 3-methyltransferase K04750 - - 0.0000000000000000000000000000000000000000000000001479 180.0
BYD2_k127_3275846_4 Glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.000000000000000000000000000000000000000000005186 176.0
BYD2_k127_3275846_5 integral membrane protein - - - 0.00000000000000000000000000000000000000000002276 165.0
BYD2_k127_3275846_6 YCII-related domain - - - 0.000000000000000000000000000000000000000002336 169.0
BYD2_k127_3275846_7 RNA polymerase, sigma subunit, ECF family K03088 - - 0.00000000000000000000000000000000000000053 151.0
BYD2_k127_330176_0 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 0.0 1014.0
BYD2_k127_330176_1 AMP-binding enzyme K12508 - 6.2.1.34 2.686e-197 645.0
BYD2_k127_330176_10 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002082 317.0
BYD2_k127_330176_11 TatD related DNase K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000006078 286.0
BYD2_k127_330176_12 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000176 267.0
BYD2_k127_330176_13 Thioredoxin K05838 - - 0.000000000000000000000000000000000000000000000000000000000000003567 225.0
BYD2_k127_330176_14 2-hydroxychromene-2-carboxylate isomerase - - - 0.00000000000000000000000000000000000000000000000000000001437 205.0
BYD2_k127_330176_15 Dioxygenase - - - 0.00000000000000000000000000000000000000000000000000000003715 200.0
BYD2_k127_330176_16 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000000000000000000000000000000000000000003195 202.0
BYD2_k127_330176_17 Transcriptional regulator, MarR family - - - 0.00000000000000000000001817 106.0
BYD2_k127_330176_18 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000005422 59.0
BYD2_k127_330176_19 glycosyl transferase, family 2 - - - 0.0001199 44.0
BYD2_k127_330176_2 AMP-binding enzyme C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001859 590.0
BYD2_k127_330176_3 PFAM Uncharacterised protein family UPF0027 K14415 - 6.5.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 572.0
BYD2_k127_330176_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009487 413.0
BYD2_k127_330176_5 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007187 397.0
BYD2_k127_330176_6 (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006223 391.0
BYD2_k127_330176_7 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007313 372.0
BYD2_k127_330176_8 COG0483 Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003918 344.0
BYD2_k127_330176_9 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005141 349.0
BYD2_k127_3317992_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 4.699e-235 734.0
BYD2_k127_3317992_1 Belongs to the Glu Leu Phe Val dehydrogenases family K00262 - 1.4.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001756 522.0
BYD2_k127_3317992_2 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001969 252.0
BYD2_k127_3317992_3 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000001494 179.0
BYD2_k127_3325208_0 ATPase related to phosphate starvation-inducible protein PhoH K07175 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007854 571.0
BYD2_k127_3325208_1 hydrolase activity, acting on ester bonds K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 372.0
BYD2_k127_3325208_2 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003765 299.0
BYD2_k127_3325208_3 PFAM Alkyl hydroperoxide reductase K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000004587 222.0
BYD2_k127_3325208_4 Protein of unknown function (DUF498/DUF598) - - - 0.000000000000000000000000000000000001506 141.0
BYD2_k127_3325208_5 Aminotransferase class I and II K14261 - - 0.00000000000000000000009957 105.0
BYD2_k127_3433950_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1198.0
BYD2_k127_3433950_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 315.0
BYD2_k127_3433950_2 dna polymerase III (Chi subunit) K02339 - 2.7.7.7 0.0000000000000000000000000000000000002208 153.0
BYD2_k127_3449829_0 type I phosphodiesterase nucleotide pyrophosphatase K19670 - 3.11.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 596.0
BYD2_k127_3449829_1 Belongs to the GST superfamily K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 329.0
BYD2_k127_3449829_2 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 317.0
BYD2_k127_3449829_3 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000001402 205.0
BYD2_k127_3449829_4 RDD family - - - 0.000000000000000000000000003279 112.0
BYD2_k127_3457924_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1066.0
BYD2_k127_3457924_1 Belongs to the DEAD box helicase family K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000002122 256.0
BYD2_k127_3457924_2 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000235 237.0
BYD2_k127_3457924_3 Forkhead associated domain - - - 0.0000000000000000000000000000000005098 146.0
BYD2_k127_3466873_0 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 6.356e-212 667.0
BYD2_k127_3466873_1 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 387.0
BYD2_k127_3466873_2 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000008614 282.0
BYD2_k127_3466873_3 ATPases associated with a variety of cellular activities K02013 - 3.6.3.34 0.000000000000000000000000000000000000000000000000000000000000000000000000001003 276.0
BYD2_k127_3466873_4 Binding-protein-dependent transport system inner membrane component K05773 - - 0.000000000000000000000000000000000000000000000000000000000000000000002643 239.0
BYD2_k127_3466873_5 PBP superfamily domain - - - 0.000000000000000000000000000000000000000000000000000002985 203.0
BYD2_k127_3489190_0 Aldehyde dehydrogenase family K15515 - 1.2.1.81 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007625 586.0
BYD2_k127_3489190_1 Belongs to the succinate malate CoA ligase beta subunit family K01903 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 431.0
BYD2_k127_3489190_2 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 431.0
BYD2_k127_3489190_3 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 - 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 368.0
BYD2_k127_3489190_4 Transcriptional regulatory protein, C terminal K02483 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 312.0
BYD2_k127_3489190_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.000000000000000000000000000000008121 133.0
BYD2_k127_3489190_6 response regulator, receiver - - - 0.00000000006546 70.0
BYD2_k127_3571960_0 Sulfatase - - - 1.29e-246 769.0
BYD2_k127_3571960_1 Sulfatase K01133 - 3.1.6.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001034 575.0
BYD2_k127_3571960_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005124 278.0
BYD2_k127_3571960_3 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000004177 236.0
BYD2_k127_3571960_4 UTRA K03710 - - 0.000000000000000000000000000000001253 141.0
BYD2_k127_3571960_5 PFAM (2R)-phospho-3-sulfolactate synthase ComA K08097 - 4.4.1.19 0.0000000000000000000000001801 118.0
BYD2_k127_3574273_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family - - - 1.469e-286 894.0
BYD2_k127_3574273_1 FAD FMN-containing dehydrogenases - - - 2.148e-199 627.0
BYD2_k127_3574273_2 glycolate oxidase iron-sulfur subunit K11473 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004554 554.0
BYD2_k127_3574273_3 ABC-type glycine betaine transport system K05845,K05846 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 519.0
BYD2_k127_3574273_4 NAD(P) transhydrogenase, alpha subunit K00324 - 1.6.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005976 477.0
BYD2_k127_3574273_5 FAD binding domain K11472 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009016 405.0
BYD2_k127_3574273_6 Putative diguanylate phosphodiesterase - - - 0.000000000000000000000000000000000000000000000000000000000001425 227.0
BYD2_k127_3574273_7 4TM region of pyridine nucleotide transhydrogenase, mitoch K00324 GO:0008150,GO:0008152,GO:0055114 1.6.1.2 0.000000000000000000000000000000000001645 141.0
BYD2_k127_357965_0 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 6.013e-265 833.0
BYD2_k127_357965_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 4.984e-195 622.0
BYD2_k127_357965_10 Histidine kinase K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000001539 204.0
BYD2_k127_357965_11 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.0000000000000000000000000000000000000000000001676 169.0
BYD2_k127_357965_12 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000000001076 155.0
BYD2_k127_357965_13 nuclease K01174 - 3.1.31.1 0.0000000000000000000000000000000005955 136.0
BYD2_k127_357965_14 TPR repeat - - - 0.000000000000000000000000003116 115.0
BYD2_k127_357965_15 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000003967 113.0
BYD2_k127_357965_17 - - - - 0.0000000003577 60.0
BYD2_k127_357965_19 - - - - 0.000001674 49.0
BYD2_k127_357965_2 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003706 587.0
BYD2_k127_357965_20 helix_turn_helix, Lux Regulon - - - 0.0001854 49.0
BYD2_k127_357965_21 Chorismate mutase K00014,K00891,K04092,K04516 - 1.1.1.25,2.7.1.71,5.4.99.5 0.0009344 46.0
BYD2_k127_357965_3 DctM subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005949 537.0
BYD2_k127_357965_4 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001932 437.0
BYD2_k127_357965_5 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002776 424.0
BYD2_k127_357965_6 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005298 391.0
BYD2_k127_357965_7 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004009 358.0
BYD2_k127_357965_8 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 344.0
BYD2_k127_357965_9 luxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001559 248.0
BYD2_k127_3582741_0 PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A K01908 - 6.2.1.17 4.887e-297 921.0
BYD2_k127_3582741_1 Protein involved in oxidation-reduction process K00382 GO:0003674,GO:0003824,GO:0004148,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005759,GO:0006082,GO:0006084,GO:0006085,GO:0006086,GO:0006090,GO:0006139,GO:0006163,GO:0006164,GO:0006464,GO:0006637,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016491,GO:0016651,GO:0016667,GO:0016668,GO:0018130,GO:0018335,GO:0019362,GO:0019438,GO:0019538,GO:0019637,GO:0019693,GO:0019752,GO:0031974,GO:0031981,GO:0032787,GO:0032991,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0035383,GO:0035384,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043436,GO:0043543,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044272,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0045239,GO:0045240,GO:0045252,GO:0045254,GO:0046390,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0055114,GO:0061732,GO:0070013,GO:0071616,GO:0071704,GO:0072521,GO:0072522,GO:0072524,GO:0090407,GO:0106077,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990204,GO:1990234 1.8.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001826 471.0
BYD2_k127_3582741_2 PFAM AFG1-family ATPase K06916 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 441.0
BYD2_k127_3582741_3 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases K00001 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004248 422.0
BYD2_k127_3582741_4 Haem-degrading - - - 0.000000000000000000000007012 114.0
BYD2_k127_3583258_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 1.744e-257 807.0
BYD2_k127_3583258_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302 - 1.3.1.76,2.1.1.107,4.99.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 576.0
BYD2_k127_3583258_10 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.00000000000000000000000000000000000000000000000000000000966 201.0
BYD2_k127_3583258_11 Haem-degrading - - - 0.0000000000000000000000000000000000000000007648 174.0
BYD2_k127_3583258_12 Rieske-like [2Fe-2S] domain K14750 - - 0.00000000000000000000000728 104.0
BYD2_k127_3583258_13 PFAM biotin lipoate A B protein ligase - - - 0.0003158 49.0
BYD2_k127_3583258_2 oxidoreductase FAD NAD(P)-binding domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002378 486.0
BYD2_k127_3583258_3 PFAM Glycosyl transferase, family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004487 460.0
BYD2_k127_3583258_4 Sulphur transport K07112 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006879 450.0
BYD2_k127_3583258_5 Peptidase M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001798 449.0
BYD2_k127_3583258_6 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003591 424.0
BYD2_k127_3583258_7 Histidine kinase K07673 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005652 299.0
BYD2_k127_3583258_8 response regulator receiver K07684 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005293 248.0
BYD2_k127_3583258_9 Chromate resistance exported protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002843 243.0
BYD2_k127_3584197_0 acyl-CoA dehydrogenase activity K09456 - - 1.613e-209 665.0
BYD2_k127_3584197_1 Bifunctional enoyl-CoA hydratase phosphate acetyltransferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002519 564.0
BYD2_k127_3584197_10 Domain in cystathionine beta-synthase and other proteins. - - - 0.00000000000000000000000000000000000000007103 166.0
BYD2_k127_3584197_11 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000000004409 154.0
BYD2_k127_3584197_12 Iron-sulfur cluster assembly protein - - - 0.000000000000000000000000000000109 126.0
BYD2_k127_3584197_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000251 416.0
BYD2_k127_3584197_3 Adenylate guanylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 363.0
BYD2_k127_3584197_4 Uncharacterised MFS-type transporter YbfB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 346.0
BYD2_k127_3584197_5 phosphoserine phosphatase activity K01768,K07315 - 3.1.3.3,4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000006872 281.0
BYD2_k127_3584197_6 Vitamin k epoxide reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006938 258.0
BYD2_k127_3584197_7 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000009512 231.0
BYD2_k127_3584197_8 Enoyl-(Acyl carrier protein) reductase K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000008858 221.0
BYD2_k127_3584197_9 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.000000000000000000000000000000000000000000000009907 173.0
BYD2_k127_3593256_0 NADH flavin oxidoreductase NADH oxidase K09461 - 1.14.13.40 0.0 1043.0
BYD2_k127_3593256_1 AMP-binding enzyme C-terminal domain K08295 - 6.2.1.32 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 602.0
BYD2_k127_3593256_10 Ring hydroxylating subunit beta family protein 1 - - - 0.000000000000000000000000000005656 126.0
BYD2_k127_3593256_2 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009912 518.0
BYD2_k127_3593256_3 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 400.0
BYD2_k127_3593256_4 FAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003915 394.0
BYD2_k127_3593256_5 Dehydrogenase K15054 - 1.1.99.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 344.0
BYD2_k127_3593256_6 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004051 278.0
BYD2_k127_3593256_7 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000002499 228.0
BYD2_k127_3593256_8 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.00000000000000000000000000000000000000000000000001235 183.0
BYD2_k127_3593256_9 ACT domain - - - 0.0000000000000000000000000000001845 128.0
BYD2_k127_3619360_0 ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component K02004 - - 8.541e-235 752.0
BYD2_k127_3619360_1 Rhodanese Homology Domain K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002684 331.0
BYD2_k127_3619360_2 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002853 291.0
BYD2_k127_3619360_3 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000004862 220.0
BYD2_k127_3619360_4 response regulator, receiver - - - 0.00000000000000000000000000000000000000000000000000007823 205.0
BYD2_k127_3619360_5 Diguanylate cyclase - - - 0.00000000000003755 85.0
BYD2_k127_3640335_0 PFAM L-carnitine dehydratase bile acid-inducible protein F K01796 - 5.1.99.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 488.0
BYD2_k127_3640335_1 mechanosensitive ion channel K22044 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004661 360.0
BYD2_k127_3640335_2 ABC transporter substrate-binding protein K02016 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 351.0
BYD2_k127_3640335_3 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001208 327.0
BYD2_k127_3640335_4 KR domain K00076,K08081 - 1.1.1.159,1.1.1.206 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005528 308.0
BYD2_k127_3640335_5 helix_turn_helix isocitrate lyase regulation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 306.0
BYD2_k127_3640335_6 Protein of unknown function DUF47 K07220 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001152 279.0
BYD2_k127_3640335_7 phosphate transporter K03306 - - 0.0000000000000000000000000001298 122.0
BYD2_k127_364532_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 GO:0000287,GO:0003674,GO:0003824,GO:0004738,GO:0005488,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016903,GO:0019842,GO:0030976,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043169,GO:0046872,GO:0046983,GO:0048037,GO:0050662,GO:0055114,GO:0097159,GO:1901363,GO:1901681 1.2.4.1 0.0 1100.0
BYD2_k127_364532_1 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 3.719e-200 629.0
BYD2_k127_364532_2 Glutathione S-transferase K03599 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000394 326.0
BYD2_k127_364532_3 Cytochrome C1 K00413 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004863 266.0
BYD2_k127_364532_4 PFAM regulatory protein AsnC Lrp family K03719 GO:0001101,GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006355,GO:0008150,GO:0009889,GO:0010033,GO:0010243,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042221,GO:0043200,GO:0043565,GO:0044424,GO:0044444,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1901698,GO:1901700,GO:1903506,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000001225 210.0
BYD2_k127_364532_5 Stringent starvation protein B K03600 - - 0.000000000000000000000000000000000000000002122 160.0
BYD2_k127_364532_6 cold-shock protein K03704 - - 0.000000000000000000000000000003063 120.0
BYD2_k127_364532_7 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000001009 96.0
BYD2_k127_364532_8 - - - - 0.00000000000001204 83.0
BYD2_k127_3651933_0 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000232 534.0
BYD2_k127_3651933_1 PFAM FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002388 512.0
BYD2_k127_3651933_2 Uncharacterized alpha/beta hydrolase domain (DUF2235) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003221 475.0
BYD2_k127_3651933_3 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 459.0
BYD2_k127_3651933_4 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003711 464.0
BYD2_k127_3651933_5 PFAM short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006506 403.0
BYD2_k127_3651933_6 2-nitropropane dioxygenase K00459 GO:0000166,GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0003824,GO:0003938,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006183,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006887,GO:0006955,GO:0007623,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0012505,GO:0016192,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032940,GO:0034404,GO:0034641,GO:0034654,GO:0034774,GO:0036094,GO:0036230,GO:0042119,GO:0042278,GO:0042451,GO:0042455,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043299,GO:0043312,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046039,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046903,GO:0048511,GO:0050896,GO:0051179,GO:0051234,GO:0055086,GO:0055114,GO:0060205,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097708,GO:0099503,GO:0101002,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1904813 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004778 318.0
BYD2_k127_3651933_7 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001233 278.0
BYD2_k127_3651933_8 NADPH quinone oxidoreductase K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000297 234.0
BYD2_k127_3684077_0 Belongs to the TPP enzyme family K03852 - 2.3.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001609 570.0
BYD2_k127_3684077_1 Belongs to the short-chain dehydrogenases reductases (SDR) family K00019 - 1.1.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 335.0
BYD2_k127_3684077_2 TRAP transporter, 4TM 12TM fusion protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004336 325.0
BYD2_k127_3684077_3 Bacterial transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006074 250.0
BYD2_k127_3684077_4 transport system periplasmic component - - - 0.00000000000000000000000000000000000000000000000000004503 200.0
BYD2_k127_3684077_5 membrane transporter protein K07090 - - 0.000000000000000000000000000000000000001986 156.0
BYD2_k127_3684077_6 short-chain dehydrogenase - - - 0.0000000000000000000000000000000006096 132.0
BYD2_k127_371200_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.562e-227 719.0
BYD2_k127_371200_1 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014 414.0
BYD2_k127_371200_10 Domain of unknown function (DUF4845) - - - 0.000000000000000004523 91.0
BYD2_k127_371200_2 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007545 362.0
BYD2_k127_371200_3 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001965 295.0
BYD2_k127_371200_4 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 288.0
BYD2_k127_371200_5 Involved in DNA repair and RecF pathway recombination K03584 - - 0.000000000000000000000000000000000000000000000000000000000000000000003534 254.0
BYD2_k127_371200_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000000000000000000000004626 240.0
BYD2_k127_371200_7 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.0000000000000000000000000000000000000000000000000000000001303 211.0
BYD2_k127_371200_8 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.000000000000000000000000000000000000000006055 156.0
BYD2_k127_371200_9 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.000000000000000000000000000002623 134.0
BYD2_k127_3714271_0 L-lactate dehydrogenase K00101,K00104 - 1.1.2.3,1.1.3.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008033 542.0
BYD2_k127_3714271_1 Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34 K15461 - 2.1.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001011 553.0
BYD2_k127_3714271_2 ABC transporter transmembrane region K06147 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 491.0
BYD2_k127_3714271_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 392.0
BYD2_k127_3714271_4 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005234 334.0
BYD2_k127_3714271_5 Histidine-specific methyltransferase, SAM-dependent - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000025 320.0
BYD2_k127_3714271_6 NAD dependent epimerase/dehydratase family K00059 - 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008818 289.0
BYD2_k127_3714271_7 KR domain K00034 - 1.1.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000727 284.0
BYD2_k127_3714271_8 Belongs to the peptidase S11 family K07258,K07262 GO:0003674,GO:0003824,GO:0004175,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901564 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000005915 268.0
BYD2_k127_3714271_9 Extracellular ligand-binding receptor K01999 - - 0.00000000000000000000000000001094 119.0
BYD2_k127_3731670_0 ABC transporter - - - 2.357e-213 678.0
BYD2_k127_3731670_1 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit - - - 1.703e-194 614.0
BYD2_k127_3731670_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000497 366.0
BYD2_k127_3731670_11 ATPases associated with a variety of cellular activities K02049 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 351.0
BYD2_k127_3731670_12 response regulator K02483,K07661,K18073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007632 335.0
BYD2_k127_3731670_13 Catechol dioxygenase N terminus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 314.0
BYD2_k127_3731670_14 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 310.0
BYD2_k127_3731670_15 alpha/beta hydrolase fold K01432 - 3.5.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007806 294.0
BYD2_k127_3731670_16 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000009195 280.0
BYD2_k127_3731670_17 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000003878 217.0
BYD2_k127_3731670_18 helix_turn_helix multiple antibiotic resistance protein - - - 0.00000000000000000000000000000000000000000000004643 174.0
BYD2_k127_3731670_19 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12976 - - 0.000000000000000000000000000000000000000919 153.0
BYD2_k127_3731670_2 Allophanate hydrolase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009041 553.0
BYD2_k127_3731670_20 Voltage-dependent anion channel K03304 - - 0.0000000000000000000000000000000000159 148.0
BYD2_k127_3731670_21 Cupin domain - - - 0.00000000000000000000000000000000006934 151.0
BYD2_k127_3731670_22 4Fe-4S dicluster domain K11473 - - 0.0000000000000000000000008723 116.0
BYD2_k127_3731670_23 LTXXQ motif family protein - - - 0.00000000000000000009274 96.0
BYD2_k127_3731670_24 response regulator, receiver - - - 0.0000000000000008636 81.0
BYD2_k127_3731670_25 MltA-interacting protein MipA - - - 0.000001713 59.0
BYD2_k127_3731670_3 Glucose sorbosone K21430 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001801 531.0
BYD2_k127_3731670_4 NAD dependent epimerase/dehydratase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000234 520.0
BYD2_k127_3731670_5 4,5-dihydroxyphthalate decarboxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 467.0
BYD2_k127_3731670_6 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006448 417.0
BYD2_k127_3731670_7 Oxidoreductase family, C-terminal alpha/beta domain K18067 - 1.3.1.64 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 417.0
BYD2_k127_3731670_8 Binding-protein-dependent transport system inner membrane component K02050 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 392.0
BYD2_k127_3731670_9 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 398.0
BYD2_k127_3738007_0 SpoVR like protein K06415 - - 7.797e-194 614.0
BYD2_k127_3738007_1 III protein, CoA-transferase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001176 506.0
BYD2_k127_3738007_2 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001098 395.0
BYD2_k127_3738007_3 PFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005942 312.0
BYD2_k127_3738007_4 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009443 319.0
BYD2_k127_3738007_5 Protein of unknown function (DUF444) K09786 - - 0.0000000000000000000000000000000000000013 151.0
BYD2_k127_3738007_7 - - - - 0.00000003378 64.0
BYD2_k127_374942_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1347.0
BYD2_k127_374942_1 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 0.0 1081.0
BYD2_k127_374942_10 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.0000000000000000000000000000000000000000001135 169.0
BYD2_k127_374942_11 - - - - 0.00000000000000000000000000000000000000008618 172.0
BYD2_k127_374942_12 FixH K09926 - - 0.0000000000000000000000000000000000000004319 153.0
BYD2_k127_374942_13 - - - - 0.000000000000000000000002018 108.0
BYD2_k127_374942_14 - - - - 0.00000000000007929 75.0
BYD2_k127_374942_15 Protein of unknown function (DUF2892) - - - 0.0000000000003827 81.0
BYD2_k127_374942_2 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003642 557.0
BYD2_k127_374942_3 Beta-Casp domain K07576 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000812 530.0
BYD2_k127_374942_4 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005129 415.0
BYD2_k127_374942_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005873 355.0
BYD2_k127_374942_6 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000000000000000000000000000000000002547 230.0
BYD2_k127_374942_7 Flavodoxin-like fold - - - 0.00000000000000000000000000000000000000000000000000000000000007153 220.0
BYD2_k127_374942_8 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000002531 179.0
BYD2_k127_374942_9 Thioredoxin K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000001053 172.0
BYD2_k127_3749628_0 PFAM Carbamoyl-phosphate synthase L chain, ATP binding domain, Biotin carboxylase C-terminal domain, Carbamoyl-phosphate synthase L chain, N-terminal domain K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 4.728e-246 764.0
BYD2_k127_3749628_1 Mur ligase family, catalytic domain K02558 - 6.3.2.45 4.756e-196 624.0
BYD2_k127_3749628_10 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 451.0
BYD2_k127_3749628_11 Amino-transferase class IV K00824 - 2.6.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003351 351.0
BYD2_k127_3749628_12 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 342.0
BYD2_k127_3749628_13 Phosphomethylpyrimidine kinase K00941 - 2.7.1.49,2.7.4.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002039 318.0
BYD2_k127_3749628_14 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 293.0
BYD2_k127_3749628_15 COG0810 Periplasmic protein TonB, links inner and outer membranes K03832 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 292.0
BYD2_k127_3749628_16 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000524 268.0
BYD2_k127_3749628_17 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007706 260.0
BYD2_k127_3749628_18 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000000000000000000000000007281 250.0
BYD2_k127_3749628_19 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001286 255.0
BYD2_k127_3749628_2 Mg chelatase subunit ChlI K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 606.0
BYD2_k127_3749628_20 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.00000000000000000000000000000000000000000000000000000000000005153 222.0
BYD2_k127_3749628_21 Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) K00788 - 2.5.1.3 0.000000000000000000000000000000000000000000000000000000000007124 218.0
BYD2_k127_3749628_22 Pyrimidine operon attenuation protein uracil phosphoribosyltransferase K02825 - 2.4.2.9 0.00000000000000000000000000000000000000000000000000000000004505 211.0
BYD2_k127_3749628_23 Uncharacterised protein family (UPF0227) K07000 - - 0.0000000000000000000000000000000000000000000000000001929 196.0
BYD2_k127_3749628_24 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.0000000000000000000000000000000000000000000000000002033 189.0
BYD2_k127_3749628_25 - - - - 0.0000000000000000000000000000000000000000000004271 173.0
BYD2_k127_3749628_26 Histidine triad (Hit) protein K02503 - - 0.0000000000000000000000000000000000000000000008091 178.0
BYD2_k127_3749628_27 Protein of unknown function (DUF3426) - - - 0.00000000000000000000000000000000000000002823 162.0
BYD2_k127_3749628_28 membrane K06077 - - 0.00000000000000000000000000000000000004176 153.0
BYD2_k127_3749628_29 Thioredoxin-like - - - 0.000000000000000000000000000000000942 136.0
BYD2_k127_3749628_3 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 611.0
BYD2_k127_3749628_30 Rubredoxin - - - 0.000000000000000000000000000000007821 127.0
BYD2_k127_3749628_31 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000005217 127.0
BYD2_k127_3749628_32 Belongs to the UPF0250 family K09158 - - 0.00000000000000000000000000000197 123.0
BYD2_k127_3749628_33 Psort location Cytoplasmic, score 8.96 K09806 - - 0.00000000000000007637 82.0
BYD2_k127_3749628_4 RNB K01147 - 3.1.13.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003276 608.0
BYD2_k127_3749628_5 Acts as a magnesium transporter K06213 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002 567.0
BYD2_k127_3749628_6 dihydroorotase K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 560.0
BYD2_k127_3749628_7 Belongs to the ATCase OTCase family K00609 - 2.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001509 507.0
BYD2_k127_3749628_8 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006295 477.0
BYD2_k127_3749628_9 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 470.0
BYD2_k127_380787_0 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 3.838e-238 744.0
BYD2_k127_380787_1 MoeA N-terminal region (domain I and II) K03750 - 2.10.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003772 518.0
BYD2_k127_380787_2 Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis K00850 - 2.7.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004082 419.0
BYD2_k127_380787_3 ROK family K00845,K00847 - 2.7.1.2,2.7.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009415 296.0
BYD2_k127_380787_4 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001287 275.0
BYD2_k127_380787_5 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000004727 256.0
BYD2_k127_380787_6 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000001958 231.0
BYD2_k127_380787_7 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 - 3.1.3.12 0.00000000000000000000000000000000000000000000000000000000006334 217.0
BYD2_k127_3908601_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0 1077.0
BYD2_k127_3908601_1 Belongs to the GcvT family K00315,K19191 - 1.5.3.19,1.5.8.4 3.798e-308 965.0
BYD2_k127_3908601_10 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001993 535.0
BYD2_k127_3908601_11 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 452.0
BYD2_k127_3908601_12 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004033 398.0
BYD2_k127_3908601_13 2-nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000372 351.0
BYD2_k127_3908601_14 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002538 325.0
BYD2_k127_3908601_15 PFAM Taurine catabolism dioxygenase TauD TfdA K03119 - 1.14.11.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005967 308.0
BYD2_k127_3908601_16 PFAM regulatory protein, MerR K22491 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 298.0
BYD2_k127_3908601_17 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005629 301.0
BYD2_k127_3908601_18 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005665 295.0
BYD2_k127_3908601_19 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006881 295.0
BYD2_k127_3908601_2 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 1.653e-206 664.0
BYD2_k127_3908601_20 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000000000000000000002157 250.0
BYD2_k127_3908601_21 protocatechuate 3,4-dioxygenase, beta subunit K00449 - 1.13.11.3 0.0000000000000000000000000000000000000000000000000000000001992 223.0
BYD2_k127_3908601_22 Tryptophan-rich sensory protein K05770 - - 0.00000000000000000000000000000000000000000000000000000009152 199.0
BYD2_k127_3908601_23 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000004719 181.0
BYD2_k127_3908601_24 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000000000000000000000000000000006674 162.0
BYD2_k127_3908601_25 protocatechuate 3,4-dioxygenase K00448 - 1.13.11.3 0.00000000000000000000000000000000000000007027 158.0
BYD2_k127_3908601_26 - - - - 0.00000000000000000000000000000000006039 138.0
BYD2_k127_3908601_27 DNA-binding transcription factor activity - - - 0.00000000000000000000000000000000009187 138.0
BYD2_k127_3908601_29 s-adenosyl-l-methionine-dependent methyltransferase - - - 0.00000000001146 76.0
BYD2_k127_3908601_3 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family - - - 5.032e-200 631.0
BYD2_k127_3908601_30 HMGL-like - - - 0.00000000002958 64.0
BYD2_k127_3908601_31 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.00001315 51.0
BYD2_k127_3908601_32 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.0001564 51.0
BYD2_k127_3908601_4 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 609.0
BYD2_k127_3908601_5 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666,K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003398 551.0
BYD2_k127_3908601_6 acyl-CoA transferases carnitine dehydratase K07749 - 2.8.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 529.0
BYD2_k127_3908601_7 PFAM Rieske 2Fe-2S domain protein K18068 - 1.14.12.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008014 533.0
BYD2_k127_3908601_8 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001736 525.0
BYD2_k127_3908601_9 PFAM Hydantoinase oxoprolinase K01473 - 3.5.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 545.0
BYD2_k127_3934741_0 PFAM FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004842 405.0
BYD2_k127_3934741_1 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001001 394.0
BYD2_k127_3934741_2 Domain of unknown function (DUF4439) - - - 0.000000000000000000000000000000000001248 141.0
BYD2_k127_3934741_3 cyclic nucleotide binding K07058,K14266 - 1.14.19.9 0.00000000000000000000000000003243 122.0
BYD2_k127_3934741_4 Polyketide cyclase / dehydrase and lipid transport - - - 0.000000000000000000000000002976 116.0
BYD2_k127_3936602_0 Cytochrome D1 heme domain K15864 - 1.7.2.1,1.7.99.1 1.246e-294 913.0
BYD2_k127_3936602_1 7TM diverse intracellular signalling - - - 4.856e-294 930.0
BYD2_k127_3936602_10 p-type atpase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001104 248.0
BYD2_k127_3936602_11 - - - - 0.000000000000000000000000000000000000000000000000000000009281 204.0
BYD2_k127_3936602_12 cytochrome b561 K12262 - - 0.00000000000000000000000000000000000000000000000000003376 193.0
BYD2_k127_3936602_13 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K21563 - - 0.0000000000000000000000000000000000000000000000000004467 193.0
BYD2_k127_3936602_14 Formylmethanofuran dehydrogenase, subunit e - - - 0.00000000000000000000000000000000000000000000000001871 185.0
BYD2_k127_3936602_15 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.0000000000000000000000000000000000000000000000001326 181.0
BYD2_k127_3936602_16 Pentapeptide repeats (9 copies) - - - 0.000000000000000000000000000000000000000000000004377 180.0
BYD2_k127_3936602_17 Domain of unknown function (DUF1924) - - - 0.000000000000000000000000000000000000006641 149.0
BYD2_k127_3936602_18 - - - - 0.000000000000000000000000000000000005078 143.0
BYD2_k127_3936602_19 Dihaem cytochrome c - - - 0.00000000000000000000000000000000691 138.0
BYD2_k127_3936602_2 cytochrome - - - 7.337e-217 691.0
BYD2_k127_3936602_20 AsnC-type helix-turn-helix domain - - - 0.00000000000000000000000000000002725 126.0
BYD2_k127_3936602_21 Cytochrome C oxidase, cbb3-type, subunit III K08738 - - 0.000000000000000000000000000131 117.0
BYD2_k127_3936602_22 Glyoxalase-like domain K01759,K08234 - 4.4.1.5 0.0000000000000000000000000008583 124.0
BYD2_k127_3936602_23 - - - - 0.000000000000000000000000001748 123.0
BYD2_k127_3936602_24 Cytochrome C' - - - 0.0000000000000000000002682 111.0
BYD2_k127_3936602_25 PRC-barrel domain - - - 0.000000000000000166 87.0
BYD2_k127_3936602_27 - - - - 0.00000126 54.0
BYD2_k127_3936602_28 sulfur carrier activity K08363 - - 0.00005055 56.0
BYD2_k127_3936602_3 4Fe-4S single cluster domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009651 586.0
BYD2_k127_3936602_4 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K12980 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 536.0
BYD2_k127_3936602_5 PFAM NnrS family protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 367.0
BYD2_k127_3936602_6 PFAM Response regulator receiver domain K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001642 281.0
BYD2_k127_3936602_7 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001895 280.0
BYD2_k127_3936602_8 CRP FNR family K21563 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003658 263.0
BYD2_k127_3936602_9 His Kinase A (phospho-acceptor) domain K02484,K07645 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000001969 259.0
BYD2_k127_3950824_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1218.0
BYD2_k127_3950824_1 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006154 480.0
BYD2_k127_3950824_2 SPFH Band 7 PHB domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 359.0
BYD2_k127_3952426_0 Required for chromosome condensation and partitioning K03529 - - 1.5e-323 1028.0
BYD2_k127_3952426_1 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 - 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006986 514.0
BYD2_k127_3952426_10 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.000000000000000001643 95.0
BYD2_k127_3952426_11 - - - - 0.0000001097 58.0
BYD2_k127_3952426_2 Aminotransferase class I and II K14267 - 2.6.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 515.0
BYD2_k127_3952426_3 Type II/IV secretion system protein K02670 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 474.0
BYD2_k127_3952426_4 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005264 437.0
BYD2_k127_3952426_5 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 415.0
BYD2_k127_3952426_6 RNA cap guanine-N2 methyltransferase K07320 - 2.1.1.298 0.0000000000000000000000000000000000000000000000000000000000000000000002206 257.0
BYD2_k127_3952426_7 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.000000000000000000000000000000000000000000000000000000000000000006929 231.0
BYD2_k127_3952426_8 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000001518 202.0
BYD2_k127_3952426_9 PFAM CHAD domain containing protein - - - 0.0000000000000000001267 100.0
BYD2_k127_3953035_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1289.0
BYD2_k127_3953035_1 Belongs to the MurCDEF family K01924 - 6.3.2.8 3.787e-211 665.0
BYD2_k127_3953035_10 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005728 480.0
BYD2_k127_3953035_11 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 461.0
BYD2_k127_3953035_12 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004377 452.0
BYD2_k127_3953035_13 Transporter associated domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424 457.0
BYD2_k127_3953035_14 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005929 460.0
BYD2_k127_3953035_15 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 460.0
BYD2_k127_3953035_16 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 429.0
BYD2_k127_3953035_17 Memo-like protein K06990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000451 435.0
BYD2_k127_3953035_18 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003686 425.0
BYD2_k127_3953035_19 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 409.0
BYD2_k127_3953035_2 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 619.0
BYD2_k127_3953035_20 ATPase (AAA K06923 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002248 370.0
BYD2_k127_3953035_21 PFAM Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006197 372.0
BYD2_k127_3953035_22 cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000174 364.0
BYD2_k127_3953035_23 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008316 358.0
BYD2_k127_3953035_24 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001205 339.0
BYD2_k127_3953035_25 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 332.0
BYD2_k127_3953035_26 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005382 325.0
BYD2_k127_3953035_27 Belongs to the RNA methyltransferase TrmD family K00554 - 2.1.1.228 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000657 327.0
BYD2_k127_3953035_28 Peptidase family M23 K08259 - 3.4.24.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 322.0
BYD2_k127_3953035_29 Cytochrome C assembly protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002387 267.0
BYD2_k127_3953035_3 type II secretion system protein K02653 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000387 604.0
BYD2_k127_3953035_30 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 - 2.7.1.24 0.000000000000000000000000000000000000000000000000000000000000000001118 241.0
BYD2_k127_3953035_31 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.000000000000000000000000000000000000000000000000000004959 192.0
BYD2_k127_3953035_32 Belongs to the CinA family K03743 - 3.5.1.42 0.0000000000000000000000000000000000000000000000005118 190.0
BYD2_k127_3953035_33 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.0000000000000000000000000000000000000000000004472 174.0
BYD2_k127_3953035_34 POTRA domain, FtsQ-type - - - 0.000000000000000000000000000000000000000000004135 172.0
BYD2_k127_3953035_35 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.000000000000000000000000000000000000005326 149.0
BYD2_k127_3953035_36 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000001131 139.0
BYD2_k127_3953035_37 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000008162 134.0
BYD2_k127_3953035_38 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000001247 114.0
BYD2_k127_3953035_39 Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase K09862 - - 0.000000000000005091 80.0
BYD2_k127_3953035_4 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000236 597.0
BYD2_k127_3953035_40 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.00000000000002572 81.0
BYD2_k127_3953035_41 Protein of unknown function (DUF721) - - - 0.000000000001748 73.0
BYD2_k127_3953035_42 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000003019 67.0
BYD2_k127_3953035_5 4Fe-4S single cluster domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 582.0
BYD2_k127_3953035_6 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 578.0
BYD2_k127_3953035_7 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 484.0
BYD2_k127_3953035_8 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 471.0
BYD2_k127_3953035_9 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004411 474.0
BYD2_k127_3965090_0 elongation factor G K02355 - - 8.787e-252 788.0
BYD2_k127_3965090_1 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 1.515e-210 670.0
BYD2_k127_3965090_10 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001094 364.0
BYD2_k127_3965090_11 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 346.0
BYD2_k127_3965090_12 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003809 362.0
BYD2_k127_3965090_13 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 316.0
BYD2_k127_3965090_14 GDP-mannose 4,6 dehydratase K18981 - 1.1.1.203 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005713 284.0
BYD2_k127_3965090_15 alpha, beta - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005785 270.0
BYD2_k127_3965090_16 Trap-type c4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000008478 234.0
BYD2_k127_3965090_17 FCD - - - 0.000000000000000000000000000000000000000000000000000000000003155 216.0
BYD2_k127_3965090_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000295 178.0
BYD2_k127_3965090_19 ChrR Cupin-like domain - - - 0.000000000000000000000000000000000000000000002793 177.0
BYD2_k127_3965090_2 COG1593 TRAP-type C4-dicarboxylate transport system large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001857 587.0
BYD2_k127_3965090_20 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000008517 147.0
BYD2_k127_3965090_21 amidohydrolase 2 - - - 0.0008318 51.0
BYD2_k127_3965090_3 oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 571.0
BYD2_k127_3965090_4 Protein of unknown function (DUF993) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004087 540.0
BYD2_k127_3965090_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002048 505.0
BYD2_k127_3965090_6 Mandelate Racemase Muconate Lactonizing - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002582 507.0
BYD2_k127_3965090_7 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005595 475.0
BYD2_k127_3965090_8 PFAM SMP-30 Gluconolaconase LRE domain protein K01053,K14274 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001164 451.0
BYD2_k127_3965090_9 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 396.0
BYD2_k127_400193_0 Hydantoinase B/oxoprolinase K01469 - 3.5.2.9 0.0 1726.0
BYD2_k127_400193_1 CobB/CobQ-like glutamine amidotransferase domain K01952 - 6.3.5.3 3.415e-278 908.0
BYD2_k127_400193_2 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004137 481.0
BYD2_k127_400193_3 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 397.0
BYD2_k127_400193_4 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 332.0
BYD2_k127_400193_5 Sugar (and other) transporter K07552 - - 0.00000000000000000000000000000000000000000000000000000000001474 222.0
BYD2_k127_400193_6 transport system small permease component - - - 0.00000000000000000000000000000000000000000000000001813 184.0
BYD2_k127_400193_7 Protein involved in outer membrane biogenesis - - - 0.0000000000000000000000000000000335 146.0
BYD2_k127_400193_8 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000006015 72.0
BYD2_k127_4026423_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 3.978e-296 926.0
BYD2_k127_4026423_1 Flavin-binding monooxygenase-like K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003979 329.0
BYD2_k127_4026423_2 PemK-like, MazF-like toxin of type II toxin-antitoxin system K07171 - - 0.000000000000000000000002495 105.0
BYD2_k127_4026423_3 Antibiotic biosynthesis monooxygenase - - - 0.000000000000001906 79.0
BYD2_k127_4026423_4 Protein of unknown function (DUF3293) - - - 0.0000144 53.0
BYD2_k127_4032052_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1446.0
BYD2_k127_4032052_1 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 1.77e-300 949.0
BYD2_k127_4032052_10 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000000000003766 205.0
BYD2_k127_4032052_11 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000006909 203.0
BYD2_k127_4032052_12 PFAM thioesterase superfamily protein - - - 0.0000000000000000000000000000000000000000000000000000007091 208.0
BYD2_k127_4032052_13 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000396 157.0
BYD2_k127_4032052_14 Putative regulatory protein - - - 0.00000000000000000000000002694 110.0
BYD2_k127_4032052_2 GAD domain K01876 - 6.1.1.12 3.835e-262 816.0
BYD2_k127_4032052_3 Acetoacetyl-CoA synthase K01907 - 6.2.1.16 3.03e-247 779.0
BYD2_k127_4032052_4 Aspartate ammonia-lyase K01744 - 4.3.1.1 1.86e-209 659.0
BYD2_k127_4032052_5 Sugar (and other) transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 424.0
BYD2_k127_4032052_6 depolymerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005372 329.0
BYD2_k127_4032052_7 Protein of unknown function (DUF502) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001885 275.0
BYD2_k127_4032052_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001355 291.0
BYD2_k127_4032052_9 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000009793 213.0
BYD2_k127_4054772_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 4.028e-209 668.0
BYD2_k127_4054772_1 PFAM L-carnitine dehydratase bile acid-inducible protein F - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006525 496.0
BYD2_k127_4054772_10 DNA-sulfur modification-associated - - - 0.00001521 57.0
BYD2_k127_4054772_11 - - - - 0.0002586 47.0
BYD2_k127_4054772_2 SMART band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005071 394.0
BYD2_k127_4054772_3 transport system periplasmic component K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 319.0
BYD2_k127_4054772_4 2-Keto-4-pentenoate hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000007535 224.0
BYD2_k127_4054772_5 Protein of unknown function (DUF1223) - - - 0.0000000000000000000000000000000000000000000000000000000000001096 224.0
BYD2_k127_4054772_6 Sigma-54 interaction domain K07715 - - 0.0000000000000000003916 87.0
BYD2_k127_4054772_7 NfeD-like C-terminal, partner-binding - - - 0.000000000587 65.0
BYD2_k127_4054772_8 MFS/sugar transport protein - - - 0.000003476 55.0
BYD2_k127_4054772_9 transporter - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00001368 55.0
BYD2_k127_4054930_0 4-hydroxybenzoate K00481 GO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016709,GO:0018659,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.14.13.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001218 537.0
BYD2_k127_4054930_1 ADP-ribosylglycohydrolase K05521 - 3.2.2.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005185 328.0
BYD2_k127_4054930_2 COG1943 Transposase and inactivated derivatives K07491 - - 0.0000000000000000000000000000000000000000000000000000000000000001901 238.0
BYD2_k127_4054930_3 Endoribonuclease L-PSP - - - 0.0000000000000000001095 96.0
BYD2_k127_4074755_0 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00001,K00121 - 1.1.1.1,1.1.1.284 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001839 490.0
BYD2_k127_4074755_1 Belongs to the adenylyl cyclase class-4 guanylyl cyclase family K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005112 375.0
BYD2_k127_4074755_2 SMART cyclic nucleotide-binding K10914 - - 0.0000000000000000000000000000000000000000000000000000000000001813 218.0
BYD2_k127_4074755_3 Aldehyde dehydrogenase K00128,K00130 - 1.2.1.3,1.2.1.8 0.000000000000000000000556 100.0
BYD2_k127_4074755_4 Adenylyl- / guanylyl cyclase, catalytic domain K01768 - 4.6.1.1 0.000000001559 64.0
BYD2_k127_412000_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001462 465.0
BYD2_k127_412000_1 histone deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006157 425.0
BYD2_k127_412000_2 AI-2E family transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001628 268.0
BYD2_k127_412000_3 Rhodanese Homology Domain K06917 - - 0.0000000000144 67.0
BYD2_k127_4133170_0 Response regulator receiver K07675 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 409.0
BYD2_k127_4133170_1 Right handed beta helix region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002655 313.0
BYD2_k127_4133170_2 Two component transcriptional regulator, LuxR family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001177 283.0
BYD2_k127_4133170_3 Two component transcriptional regulator, LuxR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000954 246.0
BYD2_k127_4133170_4 Belongs to the peptidase S8 family - - - 0.000000000000000000002016 111.0
BYD2_k127_420091_0 FAD linked oxidase domain protein K06911 - - 0.0 1148.0
BYD2_k127_420091_1 Peptidase family M48 K03799 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005339 336.0
BYD2_k127_420091_2 COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases - GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001427 288.0
BYD2_k127_420091_3 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000746 285.0
BYD2_k127_420091_4 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000002271 229.0
BYD2_k127_420091_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000006262 223.0
BYD2_k127_420091_6 - - - - 0.00000000000000004121 86.0
BYD2_k127_4206273_0 Belongs to the IlvD Edd family - - - 2.23e-196 642.0
BYD2_k127_4206273_1 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006168 598.0
BYD2_k127_4206273_10 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000000000000000000000000000000000000000659 233.0
BYD2_k127_4206273_11 Enoyl-CoA hydratase/isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000003584 241.0
BYD2_k127_4206273_12 COG1247 Sortase and related acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000005328 211.0
BYD2_k127_4206273_13 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000006018 156.0
BYD2_k127_4206273_14 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000001566 81.0
BYD2_k127_4206273_15 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.0000000000002341 76.0
BYD2_k127_4206273_16 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.000000000002328 72.0
BYD2_k127_4206273_17 - - - - 0.0000000000209 65.0
BYD2_k127_4206273_18 Glycine zipper 2TM domain K04062 - - 0.000002815 55.0
BYD2_k127_4206273_2 Protein of unknown function (DUF521) K09123 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005139 587.0
BYD2_k127_4206273_3 Glucose inhibited division protein A - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 562.0
BYD2_k127_4206273_4 PFAM Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 448.0
BYD2_k127_4206273_5 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 373.0
BYD2_k127_4206273_6 Enoyl-CoA hydratase/isomerase K13766,K13779 - 4.2.1.18,4.2.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007303 350.0
BYD2_k127_4206273_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 288.0
BYD2_k127_4206273_8 PFAM Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001061 289.0
BYD2_k127_4206273_9 Class II Aldolase and Adducin N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007806 273.0
BYD2_k127_4206322_0 chain 5 L K00341 - 1.6.5.3 5.008e-266 832.0
BYD2_k127_4206322_1 COG1008 NADH ubiquinone oxidoreductase subunit 4 (chain M) K00342 - 1.6.5.3 8.84e-231 722.0
BYD2_k127_4206322_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 524.0
BYD2_k127_4206322_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 298.0
BYD2_k127_4206322_4 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000721 238.0
BYD2_k127_4206322_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000004083 224.0
BYD2_k127_4206322_6 NUDIX domain K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000001241 211.0
BYD2_k127_4206322_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.00000000000000000000000000000000000000003943 163.0
BYD2_k127_4206322_8 Flavodoxin-like fold K19784 - - 0.000000008464 58.0
BYD2_k127_4221179_0 Belongs to the TPP enzyme family K01576 - 4.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009038 627.0
BYD2_k127_4221179_1 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008674 350.0
BYD2_k127_4221179_2 Phosphoenolpyruvate phosphomutase K20454 - 4.1.3.32 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 325.0
BYD2_k127_4221179_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000462 264.0
BYD2_k127_4221528_0 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 2.279e-208 656.0
BYD2_k127_4221528_1 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000116 611.0
BYD2_k127_4221528_10 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003859 318.0
BYD2_k127_4221528_11 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003481 290.0
BYD2_k127_4221528_12 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 282.0
BYD2_k127_4221528_13 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003156 269.0
BYD2_k127_4221528_14 peptidase, M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008431 268.0
BYD2_k127_4221528_15 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005167 252.0
BYD2_k127_4221528_16 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000102 266.0
BYD2_k127_4221528_17 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000000000000000000000000000000000004966 232.0
BYD2_k127_4221528_18 Bacterial regulatory proteins, tetR family K05501 - - 0.000000000000000000000000000000000000000000000000000000004563 223.0
BYD2_k127_4221528_19 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.00000000000000000000000000000000000000000000000000001795 192.0
BYD2_k127_4221528_2 Cobalamin synthesis protein cobW C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 462.0
BYD2_k127_4221528_20 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000006084 194.0
BYD2_k127_4221528_21 Hsp20/alpha crystallin family - - - 0.0000000000000000000000000000000000000000004095 166.0
BYD2_k127_4221528_22 PFAM Rhodanese domain protein K01011 - 2.8.1.1,2.8.1.2 0.000000000000000000000000000000004468 143.0
BYD2_k127_4221528_23 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.0000000000000000000000000000003372 128.0
BYD2_k127_4221528_24 Putative zinc-finger - - - 0.000000000000007775 77.0
BYD2_k127_4221528_25 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 0.0000000000003057 72.0
BYD2_k127_4221528_26 Cysteine-rich CWC - - - 0.00002134 51.0
BYD2_k127_4221528_3 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 441.0
BYD2_k127_4221528_4 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase K06969 - 2.1.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003003 434.0
BYD2_k127_4221528_5 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 374.0
BYD2_k127_4221528_6 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 379.0
BYD2_k127_4221528_7 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002617 344.0
BYD2_k127_4221528_8 Lipid A Biosynthesis K02517,K12974 - 2.3.1.241,2.3.1.242 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000165 348.0
BYD2_k127_4221528_9 ThiF family K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002552 332.0
BYD2_k127_4222051_0 Adenylate cyclase K01768 - 4.6.1.1 7.89e-221 698.0
BYD2_k127_4222051_1 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003626 450.0
BYD2_k127_4222051_10 Predicted membrane protein (DUF2069) - - - 0.000000000000000000000000000000000004055 140.0
BYD2_k127_4222051_11 DsrE/DsrF-like family K06039 - - 0.00000000000000000000000000000002749 135.0
BYD2_k127_4222051_2 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 - 2.4.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009497 421.0
BYD2_k127_4222051_3 Fatty acid hydroxylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004353 385.0
BYD2_k127_4222051_4 Catalyzes the decarboxylation of orotidine 5'- monophosphate (OMP) to uridine 5'-monophosphate (UMP) K01591 GO:0003674,GO:0003824,GO:0004590,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000004456 314.0
BYD2_k127_4222051_5 UPF0761 membrane protein K07058 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 292.0
BYD2_k127_4222051_6 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004096 279.0
BYD2_k127_4222051_7 HpcH/HpaI aldolase/citrate lyase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000008073 257.0
BYD2_k127_4222051_8 transcriptional regulator, ArsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003141 266.0
BYD2_k127_4222051_9 Belongs to the PsiE family K13256 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000001505 195.0
BYD2_k127_4226619_0 Transporter, hydrophobe amphiphile efflux-1 (HAE1) family K03296,K18138 - - 0.0 1335.0
BYD2_k127_4226619_1 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 606.0
BYD2_k127_4226619_2 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001523 402.0
BYD2_k127_4226619_3 Outer membrane efflux protein K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001922 400.0
BYD2_k127_4226619_4 Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine K02502 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 381.0
BYD2_k127_4226619_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585,K18145 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001075 346.0
BYD2_k127_4226619_6 - - - - 0.00000000000000000000000000000000000000000000002491 176.0
BYD2_k127_4226619_7 Histidine kinase - - - 0.000000000000000000000246 103.0
BYD2_k127_4226619_8 protein conserved in bacteria K09937 - - 0.0000000000000000007672 87.0
BYD2_k127_4226619_9 PFAM regulatory protein TetR - - - 0.000000000001382 75.0
BYD2_k127_4227896_0 Activates fatty acids by binding to coenzyme A K00666,K01897 - 6.2.1.3 9.253e-214 691.0
BYD2_k127_4227896_1 Phosphate transporter K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 461.0
BYD2_k127_4227896_2 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain K01781,K20023 - 4.2.1.156,4.2.1.42,5.1.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003062 387.0
BYD2_k127_4227896_3 Pfam:DUF461 K09796 - - 0.0000000000000000000000000001592 126.0
BYD2_k127_4229080_0 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 5.094e-199 634.0
BYD2_k127_4229080_1 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 430.0
BYD2_k127_4229080_2 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 297.0
BYD2_k127_4229080_3 4TM region of pyridine nucleotide transhydrogenase, mitoch K00322,K00324 - 1.6.1.1,1.6.1.2 0.0000000000000000000000000000000000000001999 151.0
BYD2_k127_4229080_4 PFAM Alanine dehydrogenase PNT K00324 - 1.6.1.2 0.000000000004374 66.0
BYD2_k127_4231759_0 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 614.0
BYD2_k127_4231759_1 Thiolase, C-terminal domain K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003857 552.0
BYD2_k127_4231759_2 Patatin-like phospholipase K07001 GO:0003674,GO:0003824,GO:0016787 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001105 280.0
BYD2_k127_4231759_3 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001279 250.0
BYD2_k127_4231759_4 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000001016 184.0
BYD2_k127_4231759_5 synthesis repressor, PhaR - - - 0.00000001129 57.0
BYD2_k127_4232218_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.613e-313 973.0
BYD2_k127_4232218_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 2.926e-246 779.0
BYD2_k127_4232218_10 MgtE intracellular N domain - - - 0.00000000000000000000000000000000000000001013 165.0
BYD2_k127_4232218_11 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.00000000000000000000000000000000008961 154.0
BYD2_k127_4232218_12 epimerase - - - 0.00000000000000000000000000000003068 138.0
BYD2_k127_4232218_13 phosphohistidine phosphatase K08296 - - 0.000000000000000003764 85.0
BYD2_k127_4232218_2 Exopolyphosphatase K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007873 558.0
BYD2_k127_4232218_3 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007453 503.0
BYD2_k127_4232218_4 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 464.0
BYD2_k127_4232218_5 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 437.0
BYD2_k127_4232218_6 Nicotinamidase K08281 - 3.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005915 314.0
BYD2_k127_4232218_7 Belongs to the MtfA family K09933 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009947 264.0
BYD2_k127_4232218_8 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000004775 231.0
BYD2_k127_4232218_9 Conserved TM helix - - - 0.000000000000000000000000000000000000000000000000000003655 209.0
BYD2_k127_4240348_0 Glycosyl hydrolase 36 superfamily, catalytic domain - - - 0.0 3616.0
BYD2_k127_4240348_1 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1163.0
BYD2_k127_4240348_10 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004849 360.0
BYD2_k127_4240348_11 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003801 328.0
BYD2_k127_4240348_12 Bacterial regulatory helix-turn-helix protein, lysR family K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002355 275.0
BYD2_k127_4240348_13 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000539 270.0
BYD2_k127_4240348_14 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000003736 239.0
BYD2_k127_4240348_15 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000001974 218.0
BYD2_k127_4240348_16 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000002576 208.0
BYD2_k127_4240348_17 X-Pro dipeptidyl-peptidase (S15 family) - - - 0.00000000000000000000000000000000000000000000000000000000384 214.0
BYD2_k127_4240348_18 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000001187 183.0
BYD2_k127_4240348_19 NUDIX domain - - - 0.000000000000000000000000000000000000000000005162 168.0
BYD2_k127_4240348_2 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 7.771e-305 958.0
BYD2_k127_4240348_20 Belongs to the small heat shock protein (HSP20) family - - - 0.00000000000000000000000000000000002293 140.0
BYD2_k127_4240348_21 HNH nucleases - - - 0.00000000000000000000000000000003528 139.0
BYD2_k127_4240348_22 BON domain K04065 - - 0.0000000000000000000000000000001114 128.0
BYD2_k127_4240348_23 metal-dependent phosphohydrolase, HD sub domain K07814 - - 0.0000000000000000003095 97.0
BYD2_k127_4240348_24 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000009246 74.0
BYD2_k127_4240348_25 Transcriptional regulator - - - 0.00000000001274 72.0
BYD2_k127_4240348_26 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0006441 47.0
BYD2_k127_4240348_3 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 2.476e-280 877.0
BYD2_k127_4240348_4 UvrD/REP helicase N-terminal domain K03657 - 3.6.4.12 2.232e-226 717.0
BYD2_k127_4240348_5 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 578.0
BYD2_k127_4240348_6 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000138 508.0
BYD2_k127_4240348_7 Mediates influx of magnesium ions K03284,K16074 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 447.0
BYD2_k127_4240348_8 Taurine catabolism dioxygenase TauD, TfdA family K22303 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 431.0
BYD2_k127_4240348_9 PFAM aminotransferase, class I - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001933 400.0
BYD2_k127_4242248_0 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008152 601.0
BYD2_k127_4242248_1 PFAM ATP-binding region, ATPase domain protein K02486 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 306.0
BYD2_k127_4242248_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000002873 220.0
BYD2_k127_4242248_3 PFAM Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000003774 164.0
BYD2_k127_4242248_4 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.00000000000000000000000000000000002304 145.0
BYD2_k127_4242248_5 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.0000000000000000000000000001168 132.0
BYD2_k127_4242248_6 Pfam Response regulator receiver - - - 0.000000000000000001587 90.0
BYD2_k127_4242248_7 acetoacetate metabolism regulatory protein AtoC K07714 K02481 - - 0.00000001467 61.0
BYD2_k127_4245264_0 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 5.009e-270 838.0
BYD2_k127_4245264_1 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 572.0
BYD2_k127_4245264_10 Lipopolysaccharide assembly protein A domain K08992 - - 0.00000000000003607 75.0
BYD2_k127_4245264_2 Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane K19804 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000689 514.0
BYD2_k127_4245264_3 Belongs to the cysteine synthase cystathionine beta- synthase family K12339 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002327 503.0
BYD2_k127_4245264_4 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002745 511.0
BYD2_k127_4245264_5 Catalyzes the interconversion between ADP-D-glycero- beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose K03274 - 5.1.3.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 430.0
BYD2_k127_4245264_6 pfkB family carbohydrate kinase K21344 - 2.7.1.167 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 380.0
BYD2_k127_4245264_7 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003718 326.0
BYD2_k127_4245264_8 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.0000000000000000000000000000000000000000000006109 168.0
BYD2_k127_4245264_9 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000003086 149.0
BYD2_k127_4265913_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0 1409.0
BYD2_k127_4265913_1 Heat shock 70 kDa protein K04043 - - 1.42e-203 640.0
BYD2_k127_4265913_2 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004064 555.0
BYD2_k127_4265913_3 L-lactate dehydrogenase K00101,K15054 - 1.1.2.3,1.1.99.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002152 350.0
BYD2_k127_4265913_4 ATP-grasp K01955 - 6.3.5.5 0.00000000000000000000000000000000000000000000000000000000005983 222.0
BYD2_k127_4265913_5 Two component transcriptional regulator, LuxR family - - - 0.000000000000000000000000002388 112.0
BYD2_k127_4265913_6 cheY-homologous receiver domain K02657 - - 0.0000000000000000001058 99.0
BYD2_k127_4265913_7 GIY-YIG catalytic domain K02342 - 2.7.7.7 0.000000004255 68.0
BYD2_k127_4281106_0 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 554.0
BYD2_k127_4281106_1 Oxidoreductase FAD-binding domain K00523 - 1.17.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003022 480.0
BYD2_k127_4281106_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 347.0
BYD2_k127_4281106_3 ABC-type branched-chain amino acid transport systems ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 357.0
BYD2_k127_4281106_4 epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000001651 261.0
BYD2_k127_4281106_5 ATPases associated with a variety of cellular activities K01996 - - 0.0000000000000000000000000000000000000000000000000004185 192.0
BYD2_k127_4281106_6 protein involved in tolerance to divalent cations K03926 - - 0.00000000000000000000000000000000000000007655 153.0
BYD2_k127_4290290_0 carbon monoxide dehydrogenase K03520 - 1.2.5.3 0.0 1110.0
BYD2_k127_4290290_1 D-aminoacylase domain protein K06015 - 3.5.1.81 3.495e-211 665.0
BYD2_k127_4290290_10 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008955 400.0
BYD2_k127_4290290_11 D-arabinono-1,4-lactone oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 409.0
BYD2_k127_4290290_12 Belongs to the GcvT family K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 387.0
BYD2_k127_4290290_13 Belongs to the pirin family K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007392 377.0
BYD2_k127_4290290_14 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 371.0
BYD2_k127_4290290_15 Short-chain dehydrogenase reductase sdr K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 331.0
BYD2_k127_4290290_16 Putative neutral zinc metallopeptidase K07054 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004495 311.0
BYD2_k127_4290290_17 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000199 285.0
BYD2_k127_4290290_18 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000004429 253.0
BYD2_k127_4290290_19 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000001669 246.0
BYD2_k127_4290290_2 Bacterial extracellular solute-binding protein K02027 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008685 599.0
BYD2_k127_4290290_20 CO dehydrogenase flavoprotein C-terminal domain K03519 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000006832 253.0
BYD2_k127_4290290_21 Domain of unknown function (DUF1932) - - - 0.0000000000000000000000000000000000000000000000000000000000000003012 230.0
BYD2_k127_4290290_22 FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000001197 192.0
BYD2_k127_4290290_23 monooxygenase activity - - - 0.000000000000000000000000000000000000000000000000009445 184.0
BYD2_k127_4290290_24 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000543 177.0
BYD2_k127_4290290_25 NIPSNAP - - - 0.00000000000000000000000000000000000000003382 154.0
BYD2_k127_4290290_26 homolog of gamma-carboxymuconolactone decarboxylase subunit K01607 - 4.1.1.44 0.000000000000000000000000000000000229 138.0
BYD2_k127_4290290_27 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 - - 0.00000000000000000000000000000001053 128.0
BYD2_k127_4290290_28 psiF repeat - - - 0.000000000000000000000004051 106.0
BYD2_k127_4290290_29 - - - - 0.00000000000002711 78.0
BYD2_k127_4290290_3 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 488.0
BYD2_k127_4290290_30 ATPase family associated with various cellular activities (AAA) - - - 0.000000008815 66.0
BYD2_k127_4290290_31 - - - - 0.00000006728 58.0
BYD2_k127_4290290_32 Bacterial protein of unknown function (DUF883) - GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0043021,GO:0043024,GO:0044464,GO:0044877,GO:0060187,GO:0071944 - 0.00001612 52.0
BYD2_k127_4290290_33 PFAM Peptidoglycan-binding domain 1 protein - - - 0.0001007 50.0
BYD2_k127_4290290_4 Major facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005308 482.0
BYD2_k127_4290290_5 Belongs to the ABC transporter superfamily K10112 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 474.0
BYD2_k127_4290290_6 COG0395 ABC-type sugar transport system, permease component K02026 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004948 436.0
BYD2_k127_4290290_7 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001538 423.0
BYD2_k127_4290290_8 COG1175 ABC-type sugar transport systems, permease components K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002866 422.0
BYD2_k127_4290290_9 Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2-amino-butenoic acid K18235 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001574 420.0
BYD2_k127_4323510_0 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 8.76e-216 692.0
BYD2_k127_4323510_1 Putative methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004699 556.0
BYD2_k127_4323510_2 - - - - 0.00000000000000000000000000000000000000000000000000000000001773 221.0
BYD2_k127_4323510_3 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000001265 175.0
BYD2_k127_4323510_4 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000002861 155.0
BYD2_k127_4323510_5 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000004187 88.0
BYD2_k127_4323510_6 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000009803 67.0
BYD2_k127_4329999_0 DNA ligase K01971 - 6.5.1.1 0.0 1263.0
BYD2_k127_4329999_1 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 0.0 1082.0
BYD2_k127_4329999_2 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 601.0
BYD2_k127_4329999_3 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002629 415.0
BYD2_k127_4329999_4 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 361.0
BYD2_k127_4329999_5 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.000000000000000000000000000000000000000000000000000000000000000006066 239.0
BYD2_k127_4329999_6 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.0000000000000000000000000000000000000000000008313 174.0
BYD2_k127_4329999_7 Protein of unknown function DUF72 - - - 0.0000000000000000000000000006112 116.0
BYD2_k127_4343346_0 PFAM Cytochrome c oxidase, subunit I K02274 - 1.9.3.1 3.277e-258 806.0
BYD2_k127_4343346_1 Cytochrome b(N-terminal)/b6/petB - - - 1.014e-236 747.0
BYD2_k127_4343346_10 Phage derived protein Gp49-like (DUF891) - - - 0.0000000000000000000000000000000000000004077 152.0
BYD2_k127_4343346_11 Cytochrome C biogenesis protein transmembrane region K09792 - - 0.000000000000000000000000000000000000006829 164.0
BYD2_k127_4343346_12 - - - - 0.0000000000000000000000000000000000006169 141.0
BYD2_k127_4343346_13 PFAM Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000000009764 149.0
BYD2_k127_4343346_14 Universal stress protein - - - 0.0000000000000000000000000000000002034 138.0
BYD2_k127_4343346_15 Universal stress protein - - - 0.000000000000000000000000000248 119.0
BYD2_k127_4343346_16 Rubrerythrin - - - 0.000000000000000002236 92.0
BYD2_k127_4343346_17 - - - - 0.000000000001299 70.0
BYD2_k127_4343346_18 DnaK suppressor protein K06204 - - 0.0000003065 55.0
BYD2_k127_4343346_2 Cytochrome C and Quinol oxidase polypeptide I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002646 548.0
BYD2_k127_4343346_3 HemN C-terminal domain - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009307 445.0
BYD2_k127_4343346_4 Methyl-viologen-reducing hydrogenase, delta subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 367.0
BYD2_k127_4343346_5 DnaJ C terminal domain K05516 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009224 339.0
BYD2_k127_4343346_6 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001417 276.0
BYD2_k127_4343346_7 Catalyzes the oxidation of the C8 methyl side group on heme O porphyrin ring into a formyl group K02259 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002054 258.0
BYD2_k127_4343346_8 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000009917 246.0
BYD2_k127_4343346_9 PFAM electron transport protein SCO1 SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000000000007447 235.0
BYD2_k127_4354718_0 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) K01969 - 6.4.1.4 3.029e-269 835.0
BYD2_k127_4354718_1 Acetyl propionyl-CoA carboxylase, alpha subunit K01968 - 6.4.1.4 3.684e-231 741.0
BYD2_k127_4354718_2 COG1960 Acyl-CoA dehydrogenases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004682 503.0
BYD2_k127_4354718_3 COG0119 Isopropylmalate homocitrate citramalate synthases K01640 - 4.1.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001744 430.0
BYD2_k127_4354718_4 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001417 304.0
BYD2_k127_4354718_5 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.00000000000000000000000000000000000000000000000000007751 188.0
BYD2_k127_4354718_6 OsmC-like protein - - - 0.0000000000000000000000000000000000000000002362 162.0
BYD2_k127_4354718_7 thiolester hydrolase activity K17362 - - 0.0000000000000000000000008058 106.0
BYD2_k127_4354718_8 Fe-S protein K06938 - - 0.000000000004937 78.0
BYD2_k127_4395662_0 Methylmalonyl-CoA mutase K01848,K14447,K20906 - 5.4.99.2,5.4.99.63,5.4.99.64 6.912e-257 803.0
BYD2_k127_4395662_1 CoA-transferase family III - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007301 490.0
BYD2_k127_4395662_10 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000001256 114.0
BYD2_k127_4395662_2 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000181 364.0
BYD2_k127_4395662_3 PFAM Acyl-CoA dehydrogenase type 2 K16047 - 1.14.14.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005482 342.0
BYD2_k127_4395662_4 HlyD membrane-fusion protein of T1SS - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000636 299.0
BYD2_k127_4395662_5 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000001455 204.0
BYD2_k127_4395662_6 Bacterial transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000005 207.0
BYD2_k127_4395662_7 transport system K07588 - - 0.0000000000000000000000000000000000000000000000000000000641 208.0
BYD2_k127_4395662_8 Methylmalonyl-CoA mutase K14447 - 5.4.99.63 0.000000000000000000000000000000000000000004846 160.0
BYD2_k127_4395662_9 helix_turn_helix multiple antibiotic resistance protein - - - 0.0000000000000000000000000000000000007452 143.0
BYD2_k127_4409462_0 Belongs to the ABC transporter superfamily K02031 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006457 498.0
BYD2_k127_4409462_1 N-terminal TM domain of oligopeptide transport permease C - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 437.0
BYD2_k127_4409462_2 Oligopeptide/dipeptide transporter, C-terminal region K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 423.0
BYD2_k127_4409462_3 PFAM 5-nucleotidase K01081 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 407.0
BYD2_k127_4409462_4 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004696 301.0
BYD2_k127_4409462_5 ThiS family K03154 - - 0.0000000000000000001297 89.0
BYD2_k127_441181_0 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 1.254e-206 651.0
BYD2_k127_441181_1 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006002 526.0
BYD2_k127_441181_2 Coenzyme F390 synthetase K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007607 504.0
BYD2_k127_441181_3 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006936 448.0
BYD2_k127_441181_4 amino acid K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 423.0
BYD2_k127_441181_5 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004557 417.0
BYD2_k127_441181_6 hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001351 332.0
BYD2_k127_441181_7 2-hydroxychromene-2-carboxylate isomerase K14584 - 5.99.1.4 0.000000000000000000000000000000000000000000000000000000000003887 213.0
BYD2_k127_441181_8 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 0.000000000000000000000000006991 111.0
BYD2_k127_4455117_0 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 490.0
BYD2_k127_4455117_1 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001961 457.0
BYD2_k127_4455117_2 Phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 398.0
BYD2_k127_4455117_3 squalene-associated FAD-dependent desaturase K21677 - 1.17.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 358.0
BYD2_k127_4455117_4 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 339.0
BYD2_k127_4455117_5 - - - - 0.0005617 48.0
BYD2_k127_447027_0 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002491 437.0
BYD2_k127_447027_1 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000001593 233.0
BYD2_k127_447027_2 Mandelate Racemase Muconate Lactonizing K01781,K20023,K20549 - 4.2.1.156,4.2.1.42,5.1.2.2,5.5.1.25 0.00000000000000000000000000000000000000000000000000000000000008231 226.0
BYD2_k127_447027_3 - - - - 0.00000000000000000000000000000000000000008492 157.0
BYD2_k127_447027_4 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000001967 158.0
BYD2_k127_4491477_0 general L-amino acid-binding periplasmic protein AapJ K09969 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003095 497.0
BYD2_k127_4491477_1 COG0765 ABC-type amino acid transport system, permease component K09971 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002134 454.0
BYD2_k127_4491477_2 acid transport system permease K09970 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002698 362.0
BYD2_k127_4491477_3 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001978 349.0
BYD2_k127_4491477_4 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.0000000000000000000000000000000000000000006698 161.0
BYD2_k127_453468_0 Protein of unknown function (DUF3417) K00688 - 2.4.1.1 6.128e-231 727.0
BYD2_k127_453468_1 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 506.0
BYD2_k127_453468_2 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001924 253.0
BYD2_k127_453468_3 HIT domain - - - 0.00000000000000000000000000000000002246 138.0
BYD2_k127_4570986_0 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 GO:0006082,GO:0006520,GO:0006566,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009987,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0071704,GO:1901564,GO:1901605 4.3.1.19 4.738e-237 741.0
BYD2_k127_4570986_1 Soluble lytic murein transglycosylase L domain K08309 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 571.0
BYD2_k127_4570986_2 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000201 355.0
BYD2_k127_4570986_3 NmrA-like family K00329,K00356 - 1.6.5.3,1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002402 316.0
BYD2_k127_4570986_4 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001437 247.0
BYD2_k127_4570986_5 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family - - - 0.00000000000000000000000000000000000000000000000000002675 195.0
BYD2_k127_4570986_6 Belongs to the GST superfamily K11209 - - 0.000000000000000126 82.0
BYD2_k127_4570986_7 membrane - - - 0.0000000000003319 74.0
BYD2_k127_4570986_8 Protein of unknown function (DUF2877) - - - 0.000000002275 67.0
BYD2_k127_4570986_9 Protein of unknown function (DUF2905) - - - 0.0000005189 53.0
BYD2_k127_4575910_0 Malic enzyme K00029 - 1.1.1.40 0.0 1041.0
BYD2_k127_4575910_1 Peptidase M48 K06013 - 3.4.24.84 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001662 473.0
BYD2_k127_4575910_10 diol metabolic process K01724 - 4.2.1.96 0.00000000000000000000000000000000000000000991 168.0
BYD2_k127_4575910_11 Putative prokaryotic signal transducing protein - - - 0.000000000000000000001119 97.0
BYD2_k127_4575910_12 - - - - 0.0000000000000000003364 93.0
BYD2_k127_4575910_13 - - - - 0.00000000000005313 75.0
BYD2_k127_4575910_14 Histone H1-like nucleoprotein HC2 K11275 - - 0.0000004443 56.0
BYD2_k127_4575910_15 Protein of unknown function (DUF2442) - - - 0.0000008214 53.0
BYD2_k127_4575910_2 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001847 433.0
BYD2_k127_4575910_3 PFAM aminotransferase, class I - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002834 431.0
BYD2_k127_4575910_4 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 418.0
BYD2_k127_4575910_5 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002256 315.0
BYD2_k127_4575910_6 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003354 273.0
BYD2_k127_4575910_7 PFAM FAD linked oxidase domain protein K00102,K03777 - 1.1.2.4,1.1.5.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000996 273.0
BYD2_k127_4575910_8 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000000000000000000000000000000000000000003436 209.0
BYD2_k127_4575910_9 NUDIX domain - - - 0.0000000000000000000000000000000000000000000000000000009327 199.0
BYD2_k127_4580676_0 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001596 542.0
BYD2_k127_4580676_1 Methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001698 531.0
BYD2_k127_4580676_2 Branched-chain amino acid transport system / permease component K01998 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005345 427.0
BYD2_k127_4580676_3 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 407.0
BYD2_k127_4580676_4 ATPases associated with a variety of cellular activities K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005082 354.0
BYD2_k127_4580676_5 lytic transglycosylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 337.0
BYD2_k127_4580676_6 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000001395 241.0
BYD2_k127_4580676_7 ABC transporter K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000008505 244.0
BYD2_k127_4580676_8 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000000000003389 207.0
BYD2_k127_4619170_0 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 - 6.1.1.7 0.0 1225.0
BYD2_k127_4619170_1 SNARE associated Golgi protein - - - 5e-323 1005.0
BYD2_k127_4619170_10 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002577 310.0
BYD2_k127_4619170_11 MotA/TolQ/ExbB proton channel family K03561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009136 282.0
BYD2_k127_4619170_12 Protein of unknown function, DUF547 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001818 294.0
BYD2_k127_4619170_13 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 - 2.7.7.38 0.0000000000000000000000000000000000000000000000000000000000000000000000000001909 263.0
BYD2_k127_4619170_14 Cobalamin adenosyltransferase K00798 - 2.5.1.17 0.00000000000000000000000000000000000000000000000000000000000000000001169 237.0
BYD2_k127_4619170_15 Glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000001056 228.0
BYD2_k127_4619170_16 GDSL-like Lipase/Acylhydrolase family - - - 0.000000000000000000000000000000000000000000000000000000007123 206.0
BYD2_k127_4619170_17 oxidation-reduction process - - - 0.000000000000000000000000000000000000000000000000005025 184.0
BYD2_k127_4619170_18 Thioesterase superfamily - - - 0.00000000000000000000000000000000000000000000004966 172.0
BYD2_k127_4619170_19 - - - - 0.00000000000000000000000000000000000000000008877 168.0
BYD2_k127_4619170_2 Tripartite tricarboxylate transporter TctA family - - - 2.69e-230 721.0
BYD2_k127_4619170_20 Biopolymer transport protein ExbD TolR K03559 - - 0.0000000000000000000000000000000000000004198 158.0
BYD2_k127_4619170_21 Uncharacterized protein conserved in bacteria (DUF2064) K09931 - - 0.000000000000000000000000000000000000002715 156.0
BYD2_k127_4619170_22 - - - - 0.0000000000000000000000000000000000001856 147.0
BYD2_k127_4619170_23 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000003046 143.0
BYD2_k127_4619170_24 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000000003285 130.0
BYD2_k127_4619170_25 Modulates RecA activity K03565 - - 0.0000000000000000000000000000731 122.0
BYD2_k127_4619170_26 Belongs to the UPF0434 family K09791 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000001576 100.0
BYD2_k127_4619170_27 - - - - 0.0000003397 57.0
BYD2_k127_4619170_3 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003024 550.0
BYD2_k127_4619170_4 Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) K01626 - 2.5.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 535.0
BYD2_k127_4619170_5 PFAM Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 451.0
BYD2_k127_4619170_6 PFAM AAA ATPase central domain protein K01338 - 3.4.21.53 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 409.0
BYD2_k127_4619170_7 Exonuclease VII, large subunit K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006726 387.0
BYD2_k127_4619170_8 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002809 352.0
BYD2_k127_4619170_9 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009141 337.0
BYD2_k127_46452_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 539.0
BYD2_k127_46452_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009136 469.0
BYD2_k127_46452_10 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase K03270 - 3.1.3.45 0.000000000000000000000000000000000000000000000000000000005622 202.0
BYD2_k127_46452_11 protein conserved in bacteria containing a divergent form of TPR repeats - - - 0.0000000000000000000000000000000000000001924 162.0
BYD2_k127_46452_12 ribosomal subunit interface protein K05808 - - 0.000000000000000000000000000000000005278 139.0
BYD2_k127_46452_13 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.00000000000000000000000000000003621 142.0
BYD2_k127_46452_14 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000000000000000000000002302 124.0
BYD2_k127_46452_2 ABC-type dipeptide transport system, periplasmic component K02035 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000256 459.0
BYD2_k127_46452_3 Metal-dependent amidase aminoacylase carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 474.0
BYD2_k127_46452_4 a g-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 354.0
BYD2_k127_46452_5 Lipopolysaccharide export system ATP-binding protein K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 361.0
BYD2_k127_46452_6 Displays ATPase and GTPase activities K06958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 328.0
BYD2_k127_46452_7 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003873 315.0
BYD2_k127_46452_8 COG1762 Phosphotransferase system mannitol fructose-specific IIA domain (Ntr-type) K02806 - - 0.0000000000000000000000000000000000000000000000000000000000003487 214.0
BYD2_k127_46452_9 peptidase S16 K07157 - - 0.000000000000000000000000000000000000000000000000000000003481 207.0
BYD2_k127_4657313_0 Dehydratase family K13875 - 4.2.1.25 1.123e-299 945.0
BYD2_k127_4657313_1 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K01685,K01708,K16846 - 4.2.1.42,4.2.1.7,4.4.1.24 2.415e-217 689.0
BYD2_k127_4657313_2 Enoyl-(Acyl carrier protein) reductase K21883 - 1.1.1.401 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003314 300.0
BYD2_k127_4657313_3 3-hydroxybutyrate dehydrogenase type K00019 GO:0000166,GO:0002262,GO:0002376,GO:0002520,GO:0003674,GO:0003824,GO:0003858,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006091,GO:0006518,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006778,GO:0006807,GO:0007275,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009059,GO:0009062,GO:0009237,GO:0009888,GO:0009987,GO:0016042,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0016627,GO:0016628,GO:0017144,GO:0019184,GO:0019290,GO:0019395,GO:0019538,GO:0019748,GO:0019752,GO:0020027,GO:0021700,GO:0030097,GO:0030099,GO:0030154,GO:0030218,GO:0030258,GO:0030855,GO:0032501,GO:0032502,GO:0032787,GO:0033013,GO:0034101,GO:0034440,GO:0034641,GO:0034645,GO:0036094,GO:0042168,GO:0042440,GO:0042541,GO:0042592,GO:0043043,GO:0043170,GO:0043249,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046395,GO:0046483,GO:0046950,GO:0046951,GO:0048037,GO:0048468,GO:0048469,GO:0048513,GO:0048534,GO:0048731,GO:0048821,GO:0048856,GO:0048869,GO:0048872,GO:0048878,GO:0050662,GO:0050801,GO:0051186,GO:0051188,GO:0051287,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055114,GO:0060429,GO:0061515,GO:0065007,GO:0065008,GO:0071695,GO:0071704,GO:0072329,GO:0097159,GO:0098771,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901568,GO:1901570,GO:1901575,GO:1901576,GO:1902224 1.1.1.30 0.000000000000000000000000000000000003645 145.0
BYD2_k127_4662002_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274,K15408 - 1.9.3.1 3.14e-321 994.0
BYD2_k127_4662002_1 cytochrome c oxidase (Subunit II) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 346.0
BYD2_k127_4662002_2 - - - - 0.0000000000000000000000000000000000000000001061 162.0
BYD2_k127_4662002_3 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000003196 50.0
BYD2_k127_4675661_0 Protein of unknown function (DUF933) K06942 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001606 527.0
BYD2_k127_4675661_1 Animal haem peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005657 524.0
BYD2_k127_4675661_10 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000005215 124.0
BYD2_k127_4675661_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000982 499.0
BYD2_k127_4675661_3 SMART Tetratricopeptide domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009819 513.0
BYD2_k127_4675661_4 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 307.0
BYD2_k127_4675661_5 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001009 252.0
BYD2_k127_4675661_6 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000004387 229.0
BYD2_k127_4675661_7 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000001884 221.0
BYD2_k127_4675661_8 Fatty acid desaturase - - - 0.00000000000000000000000000000000001972 138.0
BYD2_k127_4675661_9 Outer membrane lipoprotein LolB - - - 0.0000000000000000000000000000000007121 137.0
BYD2_k127_4769793_0 Bacterial extracellular solute-binding protein K02027 - - 1.926e-210 681.0
BYD2_k127_4769793_1 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 2.303e-195 629.0
BYD2_k127_4769793_10 LrgB-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002448 314.0
BYD2_k127_4769793_11 NADPH quinone oxidoreductase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000253 294.0
BYD2_k127_4769793_12 NMT1-like family K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000005461 254.0
BYD2_k127_4769793_13 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000001539 244.0
BYD2_k127_4769793_14 Protein of unknown function DUF126 K09128 - - 0.0000000000000000000000000000000000000000000000000002553 210.0
BYD2_k127_4769793_15 Domain of unknown function (DUF1330) - - - 0.000000000000000000000000000000000000000000000007062 174.0
BYD2_k127_4769793_16 GntR family transcriptional regulator K03486,K03710 - - 0.000000000000000000000000000000000000000002155 165.0
BYD2_k127_4769793_17 LrgA family - - - 0.0000000000000000000000000000435 120.0
BYD2_k127_4769793_18 COGs COG4446 conserved - - - 0.0000000000000000000000000005238 119.0
BYD2_k127_4769793_19 Adenylyl- / guanylyl cyclase, catalytic domain K01768,K07315 - 3.1.3.3,4.6.1.1 0.00000000000000006846 91.0
BYD2_k127_4769793_2 Protein of unknown function (DUF521) K09123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007541 597.0
BYD2_k127_4769793_3 TRAP transporter, 4TM 12TM fusion protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007937 569.0
BYD2_k127_4769793_4 PFAM binding-protein-dependent transport systems inner membrane component K02025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002137 443.0
BYD2_k127_4769793_5 Pyridoxal-phosphate dependent enzyme K01754 - 4.3.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 408.0
BYD2_k127_4769793_6 Binding-protein-dependent transport system inner membrane component K02026,K17323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000519 407.0
BYD2_k127_4769793_7 TOBE domain K10112 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002643 418.0
BYD2_k127_4769793_8 Belongs to the enoyl-CoA hydratase isomerase family K01692 - 4.2.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002309 382.0
BYD2_k127_4769793_9 Alpha/beta hydrolase family K01563 - 3.8.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003248 369.0
BYD2_k127_485032_0 Secretin and TonB N terminus short domain K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 612.0
BYD2_k127_485032_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009863 601.0
BYD2_k127_485032_2 Type II secretion system K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007626 350.0
BYD2_k127_485032_3 Type II secretion system (T2SS), protein G K02456 - - 0.000000000000000000000000000000000000000000000000002674 185.0
BYD2_k127_485032_4 Prokaryotic N-terminal methylation motif K02456 - - 0.0000000000000000000000000000000000027 159.0
BYD2_k127_485032_5 - - - - 0.0000000000000000000000000001221 126.0
BYD2_k127_485032_6 - - - - 0.00000000000000001473 89.0
BYD2_k127_485032_7 carbon utilization - - - 0.0000000000000001063 91.0
BYD2_k127_485032_8 - - - - 0.000000000000001111 89.0
BYD2_k127_4857011_0 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.000000000000000000000000000000000000000000000000000000000000000007069 232.0
BYD2_k127_4857011_1 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000005006 153.0
BYD2_k127_4857011_2 - - - - 0.00002976 46.0
BYD2_k127_4858877_0 Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate K00451 - 1.13.11.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 608.0
BYD2_k127_4858877_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003134 568.0
BYD2_k127_4858877_2 PFAM fumarylacetoacetate (FAA) hydrolase K01555 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 312.0
BYD2_k127_4858877_3 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000001395 55.0
BYD2_k127_4859073_0 ribosomal rna small subunit methyltransferase - - - 3.918e-203 642.0
BYD2_k127_4859073_1 Pyridoxal-phosphate dependent enzyme K01697 - 4.2.1.22 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001195 601.0
BYD2_k127_4859073_2 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01758 - 4.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 558.0
BYD2_k127_4859073_3 PFAM peptidase M28 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000003188 263.0
BYD2_k127_4859073_4 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000001475 182.0
BYD2_k127_4859073_5 COG0685 5,10-methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.000000000000007394 83.0
BYD2_k127_4865854_0 PFAM ABC transporter K06158 - - 7.357e-204 655.0
BYD2_k127_4865854_1 Taurine catabolism dioxygenase TauD, TfdA family K03119,K22303 - 1.14.11.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 412.0
BYD2_k127_4865854_10 Methyltransferase type 11 K00570 - 2.1.1.17,2.1.1.71 0.00000000000000000000000000000000000000000000000000000000000000216 227.0
BYD2_k127_4865854_11 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000003523 193.0
BYD2_k127_4865854_12 deoxyhypusine monooxygenase activity K01387 - 3.4.24.3 0.00000000000000000000000000000000000000000001481 183.0
BYD2_k127_4865854_13 PFAM Cold-shock protein, DNA-binding - - - 0.0000000000000000000000000000000000000000002044 170.0
BYD2_k127_4865854_14 Domain of unknown function (DUF4184) - - - 0.0000000000000000001883 96.0
BYD2_k127_4865854_15 BON domain - - - 0.0000000000000001616 86.0
BYD2_k127_4865854_16 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component K11688 - - 0.000000001555 70.0
BYD2_k127_4865854_17 EF hand - - - 0.00006468 51.0
BYD2_k127_4865854_18 COG3090 TRAP-type C4-dicarboxylate transport system small permease component - - - 0.00006981 52.0
BYD2_k127_4865854_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 411.0
BYD2_k127_4865854_3 FMN-dependent dehydrogenase K00104 - 1.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 411.0
BYD2_k127_4865854_4 Cupin domain K00450 - 1.13.11.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 303.0
BYD2_k127_4865854_5 VWA domain containing CoxE-like protein K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007651 286.0
BYD2_k127_4865854_6 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000005362 294.0
BYD2_k127_4865854_7 Fatty acid desaturase K00496 - 1.14.15.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000007957 272.0
BYD2_k127_4865854_8 Protein of unknown function (DUF2914) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001943 268.0
BYD2_k127_4865854_9 TRAP C4-dicarboxylate transport system permease DctM subunit K11690 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006742 269.0
BYD2_k127_4907926_0 Amidase, hydantoinase carbamoylase family K06016 - 3.5.1.6,3.5.1.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 522.0
BYD2_k127_4907926_1 Cobalamin-independent synthase, Catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 512.0
BYD2_k127_4907926_10 - - - - 0.000000001794 64.0
BYD2_k127_4907926_2 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004461 448.0
BYD2_k127_4907926_3 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008927 400.0
BYD2_k127_4907926_4 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 343.0
BYD2_k127_4907926_5 Ketopantoate reductase PanE/ApbA C terminal K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000116 286.0
BYD2_k127_4907926_6 von Willebrand factor (vWF) type A domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000001428 241.0
BYD2_k127_4907926_7 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.000000000000000000000000000000000000000000000000000000000000000001105 250.0
BYD2_k127_4907926_8 cytochrome C peroxidase - - - 0.00000000000000000000000000000000001017 148.0
BYD2_k127_4907926_9 nuclease K01174 - 3.1.31.1 0.000000000000000000000000005966 122.0
BYD2_k127_4909938_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 3.05e-229 718.0
BYD2_k127_4909938_1 Vacuole effluxer Atg22 like K06902 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003802 531.0
BYD2_k127_4909938_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 464.0
BYD2_k127_4909938_3 Protein of unknown function (DUF1499) - - - 0.00000000000000000000000000000000000000000000000003374 187.0
BYD2_k127_4909938_4 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000004478 102.0
BYD2_k127_4909938_5 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000001635 115.0
BYD2_k127_4909938_6 Domain of unknown function (DUF4398) - - - 0.000000000000009557 87.0
BYD2_k127_4909938_7 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000005413 68.0
BYD2_k127_4920534_0 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 2.604e-272 844.0
BYD2_k127_4920534_1 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 7.623e-208 655.0
BYD2_k127_4920534_2 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 1.276e-206 649.0
BYD2_k127_4920534_3 Transmembrane secretion effector - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003673 386.0
BYD2_k127_4956956_0 glutamate synthase K00265 - 1.4.1.13,1.4.1.14 0.0 1232.0
BYD2_k127_4956956_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 - 2.6.1.16 3.193e-280 880.0
BYD2_k127_4956956_10 protein deglycation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 361.0
BYD2_k127_4956956_11 Protein of unknown function (DUF2891) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 302.0
BYD2_k127_4956956_12 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004629 279.0
BYD2_k127_4956956_13 MgtC family K07507 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002488 265.0
BYD2_k127_4956956_14 Domain of unknown function (DUF4396) - - - 0.000000000000000000000000000000000000000000000000000000000000005046 220.0
BYD2_k127_4956956_15 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000006901 221.0
BYD2_k127_4956956_16 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000001733 153.0
BYD2_k127_4956956_17 MltA-interacting MipA family protein - - - 0.0000000000005029 81.0
BYD2_k127_4956956_2 glutamate synthase K00266 - 1.4.1.13,1.4.1.14 7.568e-238 742.0
BYD2_k127_4956956_3 Flavin containing amine oxidoreductase - - - 1.503e-226 722.0
BYD2_k127_4956956_4 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 564.0
BYD2_k127_4956956_5 PFAM extracellular solute-binding protein family 1 K05813 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002734 556.0
BYD2_k127_4956956_6 Glycine cleavage T-protein C-terminal barrel domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007731 464.0
BYD2_k127_4956956_7 Part of the ABC transporter complex UgpABCE involved in sn-glycerol-3-phosphate import. Responsible for energy coupling to the transport system K05816,K10111,K10112 - 3.6.3.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009561 447.0
BYD2_k127_4956956_8 PFAM binding-protein-dependent transport systems inner membrane component K05814 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 415.0
BYD2_k127_4956956_9 probably responsible for the translocation of the substrate across the membrane K05815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000404 405.0
BYD2_k127_496214_0 Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine K12960 - 3.5.4.28,3.5.4.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 549.0
BYD2_k127_496214_1 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000111 402.0
BYD2_k127_496214_2 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002381 341.0
BYD2_k127_496214_3 Phosphoglycolate phosphatase K22292 - 3.1.3.105 0.0000000000000000000000000000000000000000000000000000000000000000000000000008628 260.0
BYD2_k127_496214_4 Belongs to the ompA family K03286 - - 0.00000000000000000000000000000000000000000000000000008325 195.0
BYD2_k127_496214_5 OmpA family K03286 - - 0.0000000000000000000000000000000003844 141.0
BYD2_k127_496214_6 Metal binding domain of Ada K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000002383 133.0
BYD2_k127_496214_7 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000004561 58.0
BYD2_k127_4985507_0 AcyL-CoA dehydrogenase K06445 - - 1.595e-240 754.0
BYD2_k127_4985507_1 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002023 336.0
BYD2_k127_4985507_2 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000000000000000000000000000000000001754 227.0
BYD2_k127_5019217_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 1.112e-220 696.0
BYD2_k127_5019217_1 Peptidase family M20/M25/M40 - - - 1.051e-212 669.0
BYD2_k127_5019217_10 Predicted membrane protein (DUF2254) - - - 0.000000000000000000000000000000000000000000000001351 186.0
BYD2_k127_5019217_11 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000001453 164.0
BYD2_k127_5019217_12 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0000000000000000000000000000000000000001733 153.0
BYD2_k127_5019217_13 SnoaL-like domain - - - 0.0000000000000000000000000000000000000009631 157.0
BYD2_k127_5019217_14 Transcriptional regulator - - - 0.0000000000000000001031 91.0
BYD2_k127_5019217_15 Zinc-finger domain - - - 0.00000000000000002467 85.0
BYD2_k127_5019217_2 Phosphoglucomutase K15778 - 5.4.2.2,5.4.2.8 2.501e-207 655.0
BYD2_k127_5019217_3 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain K00058 - 1.1.1.399,1.1.1.95 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 503.0
BYD2_k127_5019217_4 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009916 488.0
BYD2_k127_5019217_5 alpha/beta hydrolase fold K07019 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006236 357.0
BYD2_k127_5019217_6 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005916 342.0
BYD2_k127_5019217_7 heptosyltransferase II K02843 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001531 331.0
BYD2_k127_5019217_8 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 300.0
BYD2_k127_5019217_9 Glutathione peroxidase K00432 - 1.11.1.9 0.0000000000000000000000000000000000000000000000000000000000000001785 227.0
BYD2_k127_5034211_0 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 5.406e-248 775.0
BYD2_k127_5034211_1 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000054 624.0
BYD2_k127_5034211_10 dehydratase K18290 - 4.2.1.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000001598 261.0
BYD2_k127_5034211_11 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000006245 213.0
BYD2_k127_5034211_12 Histone methylation protein DOT1 - - - 0.00000000000000000000000000000000000000000000002847 185.0
BYD2_k127_5034211_13 Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides K07232 - - 0.0000000000000000000000000000000000000000002886 174.0
BYD2_k127_5034211_14 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000004024 146.0
BYD2_k127_5034211_15 Redoxin domain protein - - - 0.0000000000000000000000000000003572 130.0
BYD2_k127_5034211_16 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 0.00000000000000000000000000001202 118.0
BYD2_k127_5034211_17 Thioesterase superfamily - - - 0.0000000000000000000000000004583 127.0
BYD2_k127_5034211_18 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.00000000000000000004703 100.0
BYD2_k127_5034211_2 glycolate oxidase subunit GlcD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 518.0
BYD2_k127_5034211_3 Transglutaminase/protease-like homologues - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001525 464.0
BYD2_k127_5034211_4 Mo-co oxidoreductase dimerisation domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006617 412.0
BYD2_k127_5034211_5 Zinc-binding dehydrogenase K12957,K13953,K19961 - 1.1.1.1,1.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 402.0
BYD2_k127_5034211_6 Aminotransferase class I and II K14155 - 4.4.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000143 346.0
BYD2_k127_5034211_7 Pfam:Kce - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002422 326.0
BYD2_k127_5034211_8 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002344 322.0
BYD2_k127_5034211_9 Belongs to the HpcH HpaI aldolase family K01644 - 4.1.3.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003491 285.0
BYD2_k127_5119757_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 8.486e-297 922.0
BYD2_k127_5119757_1 NMT1-like family K07080 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005935 497.0
BYD2_k127_5119757_2 Fumarase C-terminus K01678,K03780 - 4.2.1.2,4.2.1.32 0.000000000000000000000000000000000000000000006454 164.0
BYD2_k127_5179438_0 Tripartite tricarboxylate transporter TctA family K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 553.0
BYD2_k127_5179438_1 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 442.0
BYD2_k127_5179438_2 TIGRFAM conserved - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 417.0
BYD2_k127_5179438_3 Catalyzes the carbon skeleton rearrangement of L- glutamate to L-threo-3-methylaspartate ((2S,3S)-3- methylaspartate) K19268 - 5.4.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 411.0
BYD2_k127_5179438_4 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001401 331.0
BYD2_k127_5179438_5 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.00000000000000000000000000000000000000000004428 165.0
BYD2_k127_5179438_6 Catalyzes the carbon skeleton rearrangement of L- glutamate to L-threo-3-methylaspartate ((2S,3S)-3- methylaspartate) K01846 - 5.4.99.1 0.0000000000000000000000000000000000000000002525 178.0
BYD2_k127_5179438_7 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000001119 122.0
BYD2_k127_5184440_0 Belongs to the malate synthase family K01638 - 2.3.3.9 2.562e-236 740.0
BYD2_k127_5184440_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K07712 - - 8.041e-209 662.0
BYD2_k127_5184440_10 - - - - 0.000000000002123 77.0
BYD2_k127_5184440_2 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001395 467.0
BYD2_k127_5184440_3 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007248 480.0
BYD2_k127_5184440_4 Signal transduction histidine kinase, nitrogen specific K07708 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003366 400.0
BYD2_k127_5184440_5 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003377 378.0
BYD2_k127_5184440_6 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002644 364.0
BYD2_k127_5184440_7 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000002548 128.0
BYD2_k127_5184440_8 Domain of unknown function (DUF4124) - - - 0.000000000000000000000000000009982 124.0
BYD2_k127_5184440_9 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 0.000000000000000000000000002382 111.0
BYD2_k127_5191125_0 Belongs to the CarB family K01955 - 6.3.5.5 0.0 1241.0
BYD2_k127_5191125_1 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 1.294e-321 994.0
BYD2_k127_5191125_10 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 289.0
BYD2_k127_5191125_11 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008328 281.0
BYD2_k127_5191125_12 Bacterial transcriptional repressor C-terminal K16137 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001958 271.0
BYD2_k127_5191125_13 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 - - 0.0000000000000000000000000000000000000000000000000000000000000000002984 232.0
BYD2_k127_5191125_14 Belongs to the Fur family K03711 - - 0.00000000000000000000000000000000000000000000000000000000000000001532 226.0
BYD2_k127_5191125_15 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000001813 217.0
BYD2_k127_5191125_16 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.00000000000000000000000000000000000000000000000000000000003167 215.0
BYD2_k127_5191125_17 Bacterial-like globin - - - 0.0000000000000000000000000000000000000000000273 164.0
BYD2_k127_5191125_18 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000003337 150.0
BYD2_k127_5191125_19 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.0000000000000000000000000000000002799 136.0
BYD2_k127_5191125_2 PFAM Aldehyde dehydrogenase K00128 - 1.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 619.0
BYD2_k127_5191125_20 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.000000000001315 69.0
BYD2_k127_5191125_3 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 572.0
BYD2_k127_5191125_4 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 552.0
BYD2_k127_5191125_5 AsmA family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004668 548.0
BYD2_k127_5191125_6 protein involved in propionate catabolism - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 514.0
BYD2_k127_5191125_7 May be involved in recombinational repair of damaged DNA K03631 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 487.0
BYD2_k127_5191125_8 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005649 460.0
BYD2_k127_5191125_9 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009941 315.0
BYD2_k127_5249299_0 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004199 551.0
BYD2_k127_5249299_1 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004605 447.0
BYD2_k127_5249299_10 transport system small permease component - - - 0.000000000000000000000000000000000000000000000006166 179.0
BYD2_k127_5249299_11 FKBP-type peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000001827 132.0
BYD2_k127_5249299_12 - - - - 0.00000000000000000000005446 109.0
BYD2_k127_5249299_13 ATP-grasp - - - 0.0000000000000000000002597 113.0
BYD2_k127_5249299_14 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.0000000000000000009363 87.0
BYD2_k127_5249299_15 Electron transfer DM13 - - - 0.00000000002808 64.0
BYD2_k127_5249299_2 Eukaryotic DNA topoisomerase I, catalytic core K03168 - 5.99.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001984 380.0
BYD2_k127_5249299_3 (Lipo)protein K07287 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007216 370.0
BYD2_k127_5249299_4 PFAM TRAP dicarboxylate transporter- DctP subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 334.0
BYD2_k127_5249299_5 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000302 308.0
BYD2_k127_5249299_6 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008032 285.0
BYD2_k127_5249299_7 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000007207 219.0
BYD2_k127_5249299_8 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000002432 205.0
BYD2_k127_5249299_9 FAD dependent oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000001247 187.0
BYD2_k127_528668_0 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001052 546.0
BYD2_k127_528668_1 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003071 525.0
BYD2_k127_528668_2 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000004554 221.0
BYD2_k127_528668_3 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000808 208.0
BYD2_k127_528668_4 ROK family K00847 - 2.7.1.4 0.00000000000000000000000000000000000000000000000004984 181.0
BYD2_k127_5287253_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 1.277e-305 956.0
BYD2_k127_5287253_1 Isoprenylcysteine carboxyl methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007441 347.0
BYD2_k127_5287253_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000000000205 237.0
BYD2_k127_5287253_3 P-type ATPase' K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000007574 213.0
BYD2_k127_5287253_4 BON domain - - - 0.0000000000000000000000000000000000000000000000000008068 196.0
BYD2_k127_5287253_5 Major Facilitator Superfamily K08151 - - 0.00000000000000000000000000000000001826 152.0
BYD2_k127_5287253_6 - - - - 0.000000000000000000000002069 107.0
BYD2_k127_5287253_7 Copper binding periplasmic protein CusF - - - 0.0000000000000000001217 89.0
BYD2_k127_5287253_9 - - - - 0.0000003243 53.0
BYD2_k127_5296204_0 xanthine dehydrogenase activity K04108 - 1.3.7.9 2.827e-215 685.0
BYD2_k127_5296204_1 Periplasmic binding protein domain K01999 - - 1.571e-214 671.0
BYD2_k127_5296204_10 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001564 361.0
BYD2_k127_5296204_11 xanthine dehydrogenase activity K04109 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006558 324.0
BYD2_k127_5296204_12 ABC transporter K01995 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002797 317.0
BYD2_k127_5296204_13 Enoyl-CoA hydratase carnithine racemase K15866 - 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000973 275.0
BYD2_k127_5296204_14 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000385 220.0
BYD2_k127_5296204_15 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.000000000000000000000000000000000000000005954 159.0
BYD2_k127_5296204_16 PFAM ABC transporter K01996 - - 0.000000000000000000000000000000000000000008712 162.0
BYD2_k127_5296204_17 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000000000001842 154.0
BYD2_k127_5296204_2 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 2.522e-200 646.0
BYD2_k127_5296204_3 C4-dicarboxylate ABC transporter permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004488 532.0
BYD2_k127_5296204_4 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006864 510.0
BYD2_k127_5296204_5 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 464.0
BYD2_k127_5296204_6 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003814 459.0
BYD2_k127_5296204_7 Histidine kinase K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 467.0
BYD2_k127_5296204_8 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006326 423.0
BYD2_k127_5296204_9 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006251 395.0
BYD2_k127_5354466_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 2.16e-265 827.0
BYD2_k127_5354466_1 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009975 585.0
BYD2_k127_5354466_10 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001251 267.0
BYD2_k127_5354466_11 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006936 250.0
BYD2_k127_5354466_12 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000002479 258.0
BYD2_k127_5354466_13 peptidase K06194 - - 0.000000000000000000000000000000000000000000000000000000000003504 228.0
BYD2_k127_5354466_14 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000002126 183.0
BYD2_k127_5354466_2 protein conserved in bacteria K09800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000128 500.0
BYD2_k127_5354466_3 Serine aminopeptidase, S33 - GO:0003674,GO:0003824,GO:0004301,GO:0005488,GO:0005515,GO:0016787,GO:0016801,GO:0016803,GO:0018742,GO:0042802,GO:0042803,GO:0046983 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003141 426.0
BYD2_k127_5354466_4 surface antigen K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 377.0
BYD2_k127_5354466_5 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 358.0
BYD2_k127_5354466_6 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000008354 298.0
BYD2_k127_5354466_7 Lytic murein transglycosylase K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 308.0
BYD2_k127_5354466_8 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003215 278.0
BYD2_k127_5354466_9 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003062 281.0
BYD2_k127_5356217_0 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 8.535e-242 762.0
BYD2_k127_5356217_1 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000204 224.0
BYD2_k127_5356217_2 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.000000000000000000000000000000000000000000000000000000000000009041 222.0
BYD2_k127_5356217_3 transcriptional regulator K07734 - - 0.0000000000000000000000000000000000000000000003974 180.0
BYD2_k127_5390799_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 0.0 1012.0
BYD2_k127_5390799_1 Histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005875 580.0
BYD2_k127_5390799_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007431 347.0
BYD2_k127_5390799_3 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004917 280.0
BYD2_k127_5390799_4 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 0.0000000000007961 68.0
BYD2_k127_5392332_0 Rieske [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004673 607.0
BYD2_k127_5392332_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000758 456.0
BYD2_k127_5392332_10 Histidine kinase K20974 - 2.7.13.3 0.0000000000000000000000000000000000001243 142.0
BYD2_k127_5392332_11 - - - - 0.000000000000000000000000000000000003378 141.0
BYD2_k127_5392332_12 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.0000000000000000002384 93.0
BYD2_k127_5392332_2 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases K05712 - 1.14.13.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007376 381.0
BYD2_k127_5392332_3 Amidohydrolase K03392 - 4.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 370.0
BYD2_k127_5392332_4 AMP-binding enzyme C-terminal domain K04110 - 6.2.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001204 283.0
BYD2_k127_5392332_5 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005161 263.0
BYD2_k127_5392332_6 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002543 235.0
BYD2_k127_5392332_7 TRAP-type C4-dicarboxylate transport system periplasmic component - - - 0.0000000000000000000000000000000000000000000000000002454 198.0
BYD2_k127_5392332_8 Sir2 family K12410 - - 0.0000000000000000000000000000000000000000000000003102 190.0
BYD2_k127_5392332_9 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000004745 169.0
BYD2_k127_5410149_0 Tripartite tricarboxylate transporter TctA family K07793 - - 7.392e-245 763.0
BYD2_k127_5410149_1 PAS fold - - - 3.337e-214 682.0
BYD2_k127_5410149_10 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000000000001672 168.0
BYD2_k127_5410149_11 Tripartite tricarboxylate transporter TctB family - - - 0.0000000000000000000000000003996 119.0
BYD2_k127_5410149_12 serine threonine protein kinase K12132 - 2.7.11.1 0.00001036 48.0
BYD2_k127_5410149_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000244 520.0
BYD2_k127_5410149_3 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003579 478.0
BYD2_k127_5410149_4 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007797 408.0
BYD2_k127_5410149_5 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 379.0
BYD2_k127_5410149_6 Fructosamine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002692 284.0
BYD2_k127_5410149_7 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.00000000000000000000000000000000000000000000000000000000000000000000000007029 256.0
BYD2_k127_5410149_8 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000009058 257.0
BYD2_k127_5410149_9 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000006583 191.0
BYD2_k127_5478872_0 Transposase C of IS166 homeodomain - - - 6.646e-241 756.0
BYD2_k127_5478872_1 COG3547 Transposase and inactivated derivatives K07486 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003764 462.0
BYD2_k127_5478872_2 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology K07484 - - 0.00000000000000000000000000000000000000000000000000000000001737 213.0
BYD2_k127_5478872_3 PFAM Integrase catalytic region - - - 0.0000000000000000000000000000001915 124.0
BYD2_k127_5478872_4 Transposase K07483 - - 0.00000000000000000000000427 106.0
BYD2_k127_5505883_0 Fumarate reductase flavoprotein C-term K00239,K00244 - 1.3.5.1,1.3.5.4 1.281e-273 854.0
BYD2_k127_5505883_1 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002229 439.0
BYD2_k127_5505883_10 PFAM Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.00000000000000000000000000000000000000000000005759 174.0
BYD2_k127_5505883_11 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000002982 128.0
BYD2_k127_5505883_12 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.00000000000000000000000000005382 124.0
BYD2_k127_5505883_13 Tripartite ATP-independent periplasmic transporter, DctM component - - - 0.0000000000000000721 82.0
BYD2_k127_5505883_2 Tyrosine recombinase xerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002423 364.0
BYD2_k127_5505883_3 Belongs to the LDH2 MDH2 oxidoreductase family K16844 - 1.1.1.338 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 342.0
BYD2_k127_5505883_4 Dienelactone hydrolase family K01061 - 3.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000871 279.0
BYD2_k127_5505883_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000000000000000000000000001283 229.0
BYD2_k127_5505883_6 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000007765 224.0
BYD2_k127_5505883_7 Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily K03976 - - 0.00000000000000000000000000000000000000000000000000000009631 208.0
BYD2_k127_5505883_8 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain - - - 0.0000000000000000000000000000000000000000000000000004191 190.0
BYD2_k127_5505883_9 Yqey-like protein K09117 - - 0.0000000000000000000000000000000000000000000000002646 180.0
BYD2_k127_5508707_0 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 2.501e-239 756.0
BYD2_k127_5508707_1 Belongs to the thiolase family K00626 - 2.3.1.9 5.296e-202 637.0
BYD2_k127_5508707_10 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000001103 246.0
BYD2_k127_5508707_11 Thioesterase superfamily protein K10806 - - 0.0000000000000000000000000000000000000000000000004113 177.0
BYD2_k127_5508707_12 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.000000000000000000000000000000000000000000000002094 177.0
BYD2_k127_5508707_13 Pfam Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000007378 178.0
BYD2_k127_5508707_14 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000001112 181.0
BYD2_k127_5508707_15 Haloacid dehalogenase-like hydrolase K20866 - 3.1.3.10 0.00000000000000000000000000000000000000000004391 167.0
BYD2_k127_5508707_16 PFAM Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000009195 154.0
BYD2_k127_5508707_17 Sulfite exporter TauE/SafE K07090 - - 0.0000000000000000000000000000000000001153 152.0
BYD2_k127_5508707_18 small protein containing a coiled-coil domain - - - 0.0000000000000003401 80.0
BYD2_k127_5508707_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002125 601.0
BYD2_k127_5508707_3 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001811 506.0
BYD2_k127_5508707_4 Phosphotransferase enzyme family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005136 484.0
BYD2_k127_5508707_5 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007035 371.0
BYD2_k127_5508707_6 Aminotransferase class-V K01556 - 3.7.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 364.0
BYD2_k127_5508707_7 Domain present in PSD-95, Dlg, and ZO-1/2. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004086 286.0
BYD2_k127_5508707_8 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003345 259.0
BYD2_k127_5508707_9 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001203 257.0
BYD2_k127_5514191_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 3.586e-273 845.0
BYD2_k127_5514191_1 Heavy-metal-associated domain K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 588.0
BYD2_k127_5514191_10 Cbb3-type cytochrome oxidase K00407 - - 0.0001024 46.0
BYD2_k127_5514191_2 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002514 442.0
BYD2_k127_5514191_3 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 421.0
BYD2_k127_5514191_4 Belongs to the MenA family. Type 1 subfamily K02548 GO:0003674,GO:0003824,GO:0004659,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0006766,GO:0006775,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016765,GO:0032194,GO:0042180,GO:0042181,GO:0042362,GO:0042371,GO:0042373,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.5.1.74 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 374.0
BYD2_k127_5514191_5 cytochrome C oxidase K00405 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001103 345.0
BYD2_k127_5514191_6 Acyl-CoA synthetase (NDP forming) K09181 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003705 289.0
BYD2_k127_5514191_7 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000001383 149.0
BYD2_k127_5514191_8 Cytochrome oxidase maturation protein - - - 0.0000000001055 65.0
BYD2_k127_5514191_9 - - - - 0.00002242 48.0
BYD2_k127_5552902_0 AMP-binding enzyme C-terminal domain K00666 - - 7.321e-254 803.0
BYD2_k127_5552902_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 8.217e-235 752.0
BYD2_k127_5552902_2 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004291 516.0
BYD2_k127_5552902_3 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM invasin domains) K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 418.0
BYD2_k127_5552902_4 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002922 345.0
BYD2_k127_5552902_5 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001021 282.0
BYD2_k127_5552902_6 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007463 279.0
BYD2_k127_5552902_7 enoyl-CoA hydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000109 252.0
BYD2_k127_5552902_8 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000004491 229.0
BYD2_k127_5552902_9 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000002043 177.0
BYD2_k127_5559338_0 Bifunctional purine biosynthesis protein PurH K00602 - 2.1.2.3,3.5.4.10 6.775e-215 687.0
BYD2_k127_5559338_1 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 9.385e-201 634.0
BYD2_k127_5559338_10 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003816 394.0
BYD2_k127_5559338_11 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002053 369.0
BYD2_k127_5559338_12 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 336.0
BYD2_k127_5559338_13 HemX, putative uroporphyrinogen-III C-methyltransferase K02496 - 2.1.1.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005063 296.0
BYD2_k127_5559338_14 Phosphate acyltransferases K00655 - 2.3.1.51 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002407 291.0
BYD2_k127_5559338_15 PFAM histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001268 271.0
BYD2_k127_5559338_16 response regulator K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002947 266.0
BYD2_k127_5559338_17 enzyme of heme biosynthesis K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000005306 269.0
BYD2_k127_5559338_18 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.000000000000000000000000000000000000000000000000000000000000000000004331 239.0
BYD2_k127_5559338_19 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 - 2.1.1.182 0.00000000000000000000000000000000000000000000000000000000000000000006991 239.0
BYD2_k127_5559338_2 aminopeptidase K01262 - 3.4.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 622.0
BYD2_k127_5559338_20 Nucleotidyl transferase K00992 - 2.7.7.99 0.00000000000000000000000000000000000000000000000000000000000000000006998 242.0
BYD2_k127_5559338_21 UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000003565 238.0
BYD2_k127_5559338_22 Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione K01759 GO:0003674,GO:0003824,GO:0004462,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006089,GO:0006518,GO:0006575,GO:0006749,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009438,GO:0009987,GO:0016151,GO:0016829,GO:0016846,GO:0019243,GO:0019752,GO:0032787,GO:0034641,GO:0042180,GO:0042182,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046185,GO:0046872,GO:0046914,GO:0051186,GO:0051596,GO:0061727,GO:0071704,GO:1901564,GO:1901575,GO:1901615 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000107 210.0
BYD2_k127_5559338_23 Protein of unknown function DUF45 K07043 - - 0.00000000000000000000000000000000000000000000001799 181.0
BYD2_k127_5559338_24 Uroporphyrinogen-III synthase HemD K01719 - 4.2.1.75 0.000000000000000000000000000000000000000000009252 182.0
BYD2_k127_5559338_25 Bacterial regulatory protein, Fis family K03557 - - 0.0000000000000000000000571 106.0
BYD2_k127_5559338_3 Belongs to the GARS family K01945 - 6.3.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 594.0
BYD2_k127_5559338_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006206 563.0
BYD2_k127_5559338_5 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001303 533.0
BYD2_k127_5559338_6 serine threonine protein kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006449 456.0
BYD2_k127_5559338_7 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002844 437.0
BYD2_k127_5559338_8 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005825 426.0
BYD2_k127_5559338_9 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001772 423.0
BYD2_k127_5576822_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 7.55e-252 782.0
BYD2_k127_5576822_1 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 602.0
BYD2_k127_5576822_2 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002223 328.0
BYD2_k127_5576822_3 PFAM peptidase T2 asparaginase 2 K13051 - 3.4.19.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001207 311.0
BYD2_k127_5576822_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005922 272.0
BYD2_k127_5576822_5 Protein of unknown function (DUF3750) - - - 0.0000000000000000000000000000004089 135.0
BYD2_k127_5582653_0 Protein of unknown function - - - 3.39e-296 951.0
BYD2_k127_5582653_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 2.183e-283 893.0
BYD2_k127_5582653_2 modulator of DNA gyrase K03568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001786 506.0
BYD2_k127_5582653_3 Predicted membrane protein (DUF2254) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002539 346.0
BYD2_k127_5582653_4 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 321.0
BYD2_k127_5582653_5 Low affinity iron permease - - - 0.00000000000000000000000000000000000000000005266 165.0
BYD2_k127_5583520_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1303.0
BYD2_k127_5583520_1 Orn/Lys/Arg decarboxylase, C-terminal domain K01583 - 4.1.1.19 0.0 1088.0
BYD2_k127_5583520_10 PFAM Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 296.0
BYD2_k127_5583520_11 Type IV Pilus-assembly protein W K02672 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002749 271.0
BYD2_k127_5583520_12 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000002456 248.0
BYD2_k127_5583520_13 Transglutaminase-like superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000002025 257.0
BYD2_k127_5583520_14 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000007396 244.0
BYD2_k127_5583520_15 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000000006062 203.0
BYD2_k127_5583520_16 Protein of unknown function (DUF962) - - - 0.0000000000000000000000000000000000000000002541 164.0
BYD2_k127_5583520_17 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000382 163.0
BYD2_k127_5583520_18 Pilus assembly protein PilX - - - 0.00000000000000000000000000000000001141 144.0
BYD2_k127_5583520_19 Protein of unknown function (DUF3579) - - - 0.0000000000000000000002184 100.0
BYD2_k127_5583520_2 Neisseria PilC beta-propeller domain K02674 - - 1.951e-278 899.0
BYD2_k127_5583520_20 Binds directly to 16S ribosomal RNA K02968 - - 0.00000000000000000868 86.0
BYD2_k127_5583520_3 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 9.962e-231 723.0
BYD2_k127_5583520_4 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 4.705e-205 650.0
BYD2_k127_5583520_5 acetylornithine aminotransferase K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002526 511.0
BYD2_k127_5583520_6 Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline K00611 - 2.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 503.0
BYD2_k127_5583520_7 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005985 459.0
BYD2_k127_5583520_8 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 403.0
BYD2_k127_5583520_9 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 327.0
BYD2_k127_5609106_0 COG1960 Acyl-CoA dehydrogenases K00253 - 1.3.8.4 2.091e-196 618.0
BYD2_k127_5609106_1 Belongs to the thiolase family K00626 - 2.3.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009029 518.0
BYD2_k127_5609106_2 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001431 291.0
BYD2_k127_5609106_3 Thioesterase superfamily - - - 0.00000000000000000000000006113 109.0
BYD2_k127_5617935_0 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002462 382.0
BYD2_k127_5617935_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002299 304.0
BYD2_k127_5617935_2 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003511 273.0
BYD2_k127_5617935_3 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006779 272.0
BYD2_k127_5617935_4 Bacterial protein of unknown function (DUF924) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001115 265.0
BYD2_k127_5617935_5 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.000000000000000000009735 98.0
BYD2_k127_5617935_6 Acetyltransferase (GNAT) domain - - - 0.00000000000000000003592 93.0
BYD2_k127_5659203_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 1.87e-289 908.0
BYD2_k127_5659203_1 Belongs to the argininosuccinate synthase family. Type 2 subfamily K01940 GO:0000050,GO:0000053,GO:0003674,GO:0003824,GO:0004055,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006575,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0019627,GO:0019752,GO:0034641,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:0072350,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 6.3.4.5 2.004e-233 742.0
BYD2_k127_5659203_10 6-phosphogluconate dehydrogenase, C-terminal domain K00033 - 1.1.1.343,1.1.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000422 333.0
BYD2_k127_5659203_11 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 322.0
BYD2_k127_5659203_12 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 298.0
BYD2_k127_5659203_13 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 296.0
BYD2_k127_5659203_14 PFAM SNARE associated Golgi protein K03975 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001661 269.0
BYD2_k127_5659203_15 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000002987 249.0
BYD2_k127_5659203_16 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000008026 239.0
BYD2_k127_5659203_17 Belongs to the UPF0234 family K09767 - - 0.000000000000000000000000000000000000000000000000000000000001159 224.0
BYD2_k127_5659203_18 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000000000000000003631 194.0
BYD2_k127_5659203_19 Hydrolase, P-loop family K06925 - - 0.0000000000000000000000000000000000000000000601 168.0
BYD2_k127_5659203_2 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 602.0
BYD2_k127_5659203_20 - - - - 0.00000000000000000000000000133 113.0
BYD2_k127_5659203_21 - - - - 0.000000000000000000000001711 109.0
BYD2_k127_5659203_22 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000006801 107.0
BYD2_k127_5659203_23 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.00000000000000001297 84.0
BYD2_k127_5659203_24 Converts alpha-N-acetylneuranimic acid (Neu5Ac) to the beta-anomer, accelerating the equilibrium between the alpha- and beta-anomers. Probably facilitates sialidase-negative bacteria to compete sucessfully for limited amounts of extracellular Neu5Ac, which is likely taken up in the beta-anomer. In addition, the rapid removal of sialic acid from solution might be advantageous to the bacterium to damp down host responses - - - 0.000000000000004571 86.0
BYD2_k127_5659203_25 Bacterial transcriptional activator domain - - - 0.000002679 51.0
BYD2_k127_5659203_3 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009078 501.0
BYD2_k127_5659203_4 rieske 2fe-2s K00499 - 1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004663 488.0
BYD2_k127_5659203_5 N-Acetylmuramoyl-L-alanine amidase K01448 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003212 490.0
BYD2_k127_5659203_6 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002281 412.0
BYD2_k127_5659203_7 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003044 381.0
BYD2_k127_5659203_8 Bacterial transcriptional activator domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008337 382.0
BYD2_k127_5659203_9 IPP transferase K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005655 343.0
BYD2_k127_5665246_0 Psort location CytoplasmicMembrane, score 10.00 K07793 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 453.0
BYD2_k127_5665246_1 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 393.0
BYD2_k127_5665246_2 Tripartite tricarboxylate transporter family receptor K07795 - - 0.00000000000000000000000000000000000000000000000000000000000000004326 235.0
BYD2_k127_5665246_3 Methyltransferase domain - - - 0.0000000000000000000000000000000000004065 143.0
BYD2_k127_5665246_4 Tripartite tricarboxylate transporter TctB family - - - 0.00000000003591 69.0
BYD2_k127_5679932_0 Aldehyde oxidase and xanthine dehydrogenase K03520 - 1.2.5.3 1e-323 999.0
BYD2_k127_5679932_1 modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 539.0
BYD2_k127_5679932_10 Histone methylation protein DOT1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005956 241.0
BYD2_k127_5679932_11 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.00000000000000000000000000000000000000000000000000000000003456 214.0
BYD2_k127_5679932_12 Protein of unknown function (DUF3237) - - - 0.000000000000000000000000000000000000000000000000001136 186.0
BYD2_k127_5679932_13 Carbon monoxide dehydrogenase subunit G (CoxG) K09386 - - 0.000000000000000000000000000000000000000000000000005995 188.0
BYD2_k127_5679932_14 Uncharacterized protein conserved in bacteria (DUF2062) K09928 - - 0.00000000000000000000000000000000000007523 148.0
BYD2_k127_5679932_15 Belongs to the UPF0307 family K09889 - - 0.00000000000000000000000003935 117.0
BYD2_k127_5679932_16 PFAM adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000627 70.0
BYD2_k127_5679932_2 PFAM MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007325 481.0
BYD2_k127_5679932_3 AAA domain (dynein-related subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 449.0
BYD2_k127_5679932_4 VWA domain containing CoxE-like protein K07161 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 430.0
BYD2_k127_5679932_5 Malonyl-CoA decarboxylase N-terminal domain K01578 - 4.1.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009661 401.0
BYD2_k127_5679932_6 von Willebrand factor, type A K07114 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005601 367.0
BYD2_k127_5679932_7 Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM K03519 - 1.2.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003864 327.0
BYD2_k127_5679932_8 Molybdenum cofactor biosynthesis protein K03831 - 2.7.7.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000172 277.0
BYD2_k127_5679932_9 metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain K07050 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002104 263.0
BYD2_k127_5705878_0 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 4.908e-195 620.0
BYD2_k127_5705878_1 Crp-like helix-turn-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009731 345.0
BYD2_k127_5705878_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002541 280.0
BYD2_k127_5705878_3 COG2513 PEP phosphonomutase and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000006937 241.0
BYD2_k127_5756677_0 Pyruvate ferredoxin/flavodoxin oxidoreductase K04090 - 1.2.7.8 0.0 1597.0
BYD2_k127_5756677_1 PFAM beta-lactamase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006493 436.0
BYD2_k127_5756677_10 Cysteine-rich secretory protein family - - - 0.000009878 53.0
BYD2_k127_5756677_2 Outer membrane usher protein K07347 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000146 349.0
BYD2_k127_5756677_3 transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 313.0
BYD2_k127_5756677_4 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000153 266.0
BYD2_k127_5756677_5 Transcriptional regulatory protein, C terminal - - - 0.0000000000000000000000000000000000000000000000000000000000525 216.0
BYD2_k127_5756677_6 Domain of unknown function DUF108 K06989 - 1.4.1.21 0.00000000000000000000000000000000000000000000000000000000007267 213.0
BYD2_k127_5756677_7 pilus organization K07346 - - 0.0000000000000000000000000000000000000000018 165.0
BYD2_k127_5756677_8 Spore Coat Protein U domain - - - 0.000000000000000001305 94.0
BYD2_k127_5848114_0 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003505 581.0
BYD2_k127_5848114_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001818 548.0
BYD2_k127_5848114_2 Bacterial extracellular solute-binding protein, family 7 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001693 502.0
BYD2_k127_5848114_3 PFAM peptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 364.0
BYD2_k127_5848114_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005199 330.0
BYD2_k127_5848114_5 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000002585 205.0
BYD2_k127_5848114_6 Required for insertion of 4Fe-4S clusters K15724 - - 0.000000000000000000000000000000000000000000000000000000002691 205.0
BYD2_k127_5848114_7 Integral membrane protein CcmA involved in cell shape determination - - - 0.0000000000000000000000000000000000000004649 151.0
BYD2_k127_5869438_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 6.808e-275 860.0
BYD2_k127_5869438_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) - - - 3.645e-195 631.0
BYD2_k127_5869438_10 COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain) K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 397.0
BYD2_k127_5869438_11 Shikimate dehydrogenase substrate binding domain K00014 - 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 387.0
BYD2_k127_5869438_12 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 321.0
BYD2_k127_5869438_13 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 319.0
BYD2_k127_5869438_14 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002273 267.0
BYD2_k127_5869438_15 COG0639 Diadenosine tetraphosphatase and related serine threonine protein phosphatases - - - 0.000000000000000000000000000000000000000000000000000000000000001863 225.0
BYD2_k127_5869438_16 Domain of unknown function (DUF305) - - - 0.000000000000000000000000000000000000000000000000000000000000168 216.0
BYD2_k127_5869438_17 HAD-hyrolase-like K01091 - 3.1.3.18 0.0000000000000000000000000000000000000000000000001853 193.0
BYD2_k127_5869438_18 DsbA oxidoreductase - - - 0.00000000000000000000000000000000000000000000928 168.0
BYD2_k127_5869438_2 DinB superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002613 536.0
BYD2_k127_5869438_21 Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.000008741 49.0
BYD2_k127_5869438_22 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0007284 46.0
BYD2_k127_5869438_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005417 494.0
BYD2_k127_5869438_4 Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis K01042 - 2.9.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000727 494.0
BYD2_k127_5869438_5 Elongation factor SelB, winged helix K03833 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001802 515.0
BYD2_k127_5869438_6 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 470.0
BYD2_k127_5869438_7 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001235 432.0
BYD2_k127_5869438_8 Beta-lactamase domain protein K06897 - 2.5.1.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 430.0
BYD2_k127_5869438_9 Dihydrodipicolinate synthetase family K01714 - 4.3.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 421.0
BYD2_k127_5885582_0 Extracellular ligand-binding receptor K01999 - - 9.247e-216 676.0
BYD2_k127_5885582_1 Uncharacterized protein conserved in bacteria (DUF2090) K03338 - 2.7.1.92 1.753e-200 656.0
BYD2_k127_5885582_2 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003386 413.0
BYD2_k127_5885582_3 PFAM 6-phosphogluconate dehydrogenase NAD-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005429 314.0
BYD2_k127_5885582_4 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000001744 219.0
BYD2_k127_5885582_5 Helix-turn-helix domain, rpiR family - - - 0.00000000000000000000000000000000000000000000000000002067 200.0
BYD2_k127_5905270_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1123.0
BYD2_k127_5905270_1 Belongs to the TPP enzyme family K01577 - 4.1.1.8 8.877e-310 957.0
BYD2_k127_5905270_10 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 432.0
BYD2_k127_5905270_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 419.0
BYD2_k127_5905270_12 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006534 407.0
BYD2_k127_5905270_13 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004528 377.0
BYD2_k127_5905270_14 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 368.0
BYD2_k127_5905270_15 Serine/threonine phosphatases, family 2C, catalytic domain K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000373 340.0
BYD2_k127_5905270_16 cyclic nucleotide-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000187 333.0
BYD2_k127_5905270_17 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001247 325.0
BYD2_k127_5905270_18 (FHA) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 304.0
BYD2_k127_5905270_19 abc transporter K02003,K05685 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001381 311.0
BYD2_k127_5905270_2 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 2.605e-256 824.0
BYD2_k127_5905270_20 Thiosulfate-oxidizing multienzyme system protein SoxA K17222,K19713 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005507,GO:0005515,GO:0005575,GO:0005623,GO:0006091,GO:0006464,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009055,GO:0009987,GO:0016491,GO:0016667,GO:0016669,GO:0016740,GO:0016782,GO:0016783,GO:0018192,GO:0018193,GO:0018198,GO:0018307,GO:0019417,GO:0019538,GO:0020037,GO:0022900,GO:0036211,GO:0042597,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044464,GO:0046872,GO:0046906,GO:0046914,GO:0046982,GO:0046983,GO:0048037,GO:0055114,GO:0071704,GO:0097159,GO:0098822,GO:1901363,GO:1901564 1.8.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006708 292.0
BYD2_k127_5905270_21 Tetratricopeptide TPR_2 repeat protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002564 271.0
BYD2_k127_5905270_22 Peptidyl-prolyl cis-trans K03775 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000003093 237.0
BYD2_k127_5905270_23 Cytochrome c K17223 - - 0.000000000000000000000000000000000000000000000000003152 199.0
BYD2_k127_5905270_24 - - - - 0.000000000000000000000000000000000000000000008311 164.0
BYD2_k127_5905270_25 Tfp pilus assembly protein, major pilin PilA K02650 - - 0.00000000000000000000000000000000000000000002053 168.0
BYD2_k127_5905270_26 sulfur oxidation protein SoxY K17226 - - 0.00000000000000000000000000000000000000000006414 165.0
BYD2_k127_5905270_27 Tripartite tricarboxylate transporter TctB family - - - 0.00000000000000000000000000000000000000003788 157.0
BYD2_k127_5905270_28 PFAM sodium calcium exchanger K07301 - - 0.0000000000000000000000000000000000000003331 165.0
BYD2_k127_5905270_29 DsrE/DsrF-like family K09004 - - 0.000000000000000000000000000000001165 134.0
BYD2_k127_5905270_3 Tripartite tricarboxylate transporter TctA family K07793 - - 9.374e-245 767.0
BYD2_k127_5905270_30 DsrE/DsrF-like family - - - 0.000000000000000000000000005583 115.0
BYD2_k127_5905270_31 oxidation protein K17227 - - 0.0000000000000000000000222 107.0
BYD2_k127_5905270_32 - - - - 0.00000000000000002698 82.0
BYD2_k127_5905270_33 CHASE2 K01768 - 4.6.1.1 0.000002452 51.0
BYD2_k127_5905270_34 crp fnr family K21564 - - 0.00007303 52.0
BYD2_k127_5905270_4 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 6.31e-244 764.0
BYD2_k127_5905270_5 CoA-transferase family III K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001416 569.0
BYD2_k127_5905270_6 sulfate assimilation K00958 - 2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001665 548.0
BYD2_k127_5905270_7 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 486.0
BYD2_k127_5905270_8 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004091 458.0
BYD2_k127_5905270_9 PFAM formyl transferase domain protein K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003858 442.0
BYD2_k127_5920941_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 3.808e-210 670.0
BYD2_k127_5920941_1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003319 279.0
BYD2_k127_5920941_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000315 124.0
BYD2_k127_5920941_3 peptidyl-tyrosine sulfation - - - 0.0000000000000000005479 93.0
BYD2_k127_5920941_4 PFAM Hpt domain protein - - - 0.000000000000000008577 87.0
BYD2_k127_5960913_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.853e-200 632.0
BYD2_k127_5960913_1 glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004558 499.0
BYD2_k127_5960913_2 phosphate starvation-inducible protein PhoH K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 455.0
BYD2_k127_5960913_3 Carbon-nitrogen hydrolase K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 476.0
BYD2_k127_5960913_4 Transporter associated domain K06189 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000048 395.0
BYD2_k127_5960913_5 membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001452 397.0
BYD2_k127_5960913_6 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006461 353.0
BYD2_k127_5960913_7 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.0000000000000000000000000000000000000000000000000000003731 205.0
BYD2_k127_5960913_8 protein affecting Mg2 Co2 transport K06195 - - 0.000000000000000000000000000000000000000000000000000002234 193.0
BYD2_k127_5960913_9 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 GO:0000469,GO:0000478,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004540,GO:0005488,GO:0006139,GO:0006355,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016072,GO:0016151,GO:0016787,GO:0016788,GO:0016892,GO:0016894,GO:0019219,GO:0019222,GO:0019538,GO:0022613,GO:0030490,GO:0031323,GO:0031326,GO:0031554,GO:0031564,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043244,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000005672 142.0
BYD2_k127_5973499_0 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase K02031,K02032 - - 1.808e-221 707.0
BYD2_k127_5973499_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004363 241.0
BYD2_k127_5973499_2 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.00000000000000000000000000000000000000000000000000000000004854 214.0
BYD2_k127_5973499_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000009195 148.0
BYD2_k127_5973499_4 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000002473 137.0
BYD2_k127_5973499_5 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000009953 102.0
BYD2_k127_5976714_0 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003697 427.0
BYD2_k127_5976714_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001272 376.0
BYD2_k127_5976714_2 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 361.0
BYD2_k127_5982322_0 Insulinase (Peptidase family M16) K07263 - - 2.003e-268 854.0
BYD2_k127_5982322_1 Phospholipase D Transphosphatidylase K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 539.0
BYD2_k127_5982322_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008888 492.0
BYD2_k127_5982322_3 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000002205 243.0
BYD2_k127_5982322_4 Branched-chain amino acid permease - - - 0.00000000000000000000000000000000000000000001292 170.0
BYD2_k127_5982322_5 Domain of unknown function (DUF4112) - - - 0.000000000000000000000000000006114 128.0
BYD2_k127_5982322_6 Branched-chain amino acid transport protein (AzlD) - - - 0.00000000000008508 82.0
BYD2_k127_6008113_0 Class II Aldolase and Adducin N-terminal domain - - - 1.479e-270 849.0
BYD2_k127_6008113_1 Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P) K08963 - 5.3.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001683 398.0
BYD2_k127_6008113_10 Domain of unknown function (DUF4936) - - - 0.0000007222 60.0
BYD2_k127_6008113_2 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 378.0
BYD2_k127_6008113_3 ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000392 233.0
BYD2_k127_6008113_4 dna polymerase iii K02341 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000006911 221.0
BYD2_k127_6008113_5 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000004797 216.0
BYD2_k127_6008113_6 Transport and Golgi organisation 2 - - - 0.000000000000000000000000000000000000000000000000000005134 201.0
BYD2_k127_6008113_7 Belongs to the GcvT family K06980 - - 0.00000000000000000000000000000000000000000000000003645 187.0
BYD2_k127_6008113_8 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000696 161.0
BYD2_k127_6008113_9 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K11991 - 3.5.4.33 0.000000001435 59.0
BYD2_k127_6031272_0 ABC-type dipeptide transport system periplasmic component K02035 - - 4.653e-217 696.0
BYD2_k127_6031272_1 Oligopeptide/dipeptide transporter, C-terminal region K02031 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003656 472.0
BYD2_k127_6031272_10 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000002232 241.0
BYD2_k127_6031272_11 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000006744 231.0
BYD2_k127_6031272_12 Transglutaminase/protease-like homologues - - - 0.000000000000000000000000000000000000000000000000000000000000001033 237.0
BYD2_k127_6031272_13 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.00000000000000000000000000000000000000000000000000000000000286 211.0
BYD2_k127_6031272_14 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000001021 211.0
BYD2_k127_6031272_15 - - - - 0.000000000000000000000000000000000000000001468 165.0
BYD2_k127_6031272_16 PFAM Appr-1-p processing domain protein - - - 0.0000000000000000000000000000000001834 140.0
BYD2_k127_6031272_17 Belongs to the BolA IbaG family K05527 - - 0.0000000000000000000004468 106.0
BYD2_k127_6031272_18 - - - - 0.0000000000000001721 81.0
BYD2_k127_6031272_19 - - - - 0.000007628 50.0
BYD2_k127_6031272_2 Binding-protein-dependent transport system inner membrane component K02033 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 428.0
BYD2_k127_6031272_20 Domain of unknown function (DUF4124) - - - 0.00002996 53.0
BYD2_k127_6031272_21 - - - - 0.0004487 49.0
BYD2_k127_6031272_3 COG1173 ABC-type dipeptide oligopeptide nickel transport systems, permease components K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 413.0
BYD2_k127_6031272_4 AMP-binding enzyme K12508 - 6.2.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 362.0
BYD2_k127_6031272_5 Succinylglutamate desuccinylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003336 352.0
BYD2_k127_6031272_6 N-formylglutamate amidohydrolase K01458 - 3.5.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007425 282.0
BYD2_k127_6031272_7 peptidylprolyl isomerase K03769 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000004251 272.0
BYD2_k127_6031272_8 cysteine dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002555 258.0
BYD2_k127_6031272_9 probably involved in intracellular septation K06190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000028 266.0
BYD2_k127_6068228_0 Aldehyde dehydrogenase family K02618,K15514 - 1.2.1.77,1.2.1.91,3.3.2.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 579.0
BYD2_k127_6068228_1 C-terminal domain of 1-Cys peroxiredoxin K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008138 364.0
BYD2_k127_6068228_2 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000001896 207.0
BYD2_k127_6068228_3 COGs COG1529 Aerobic-type carbon monoxide dehydrogenase large subunit CoxL CutL homologs K04108 - 1.3.7.9 0.0000000000000000000000000000000000000000000000000000000469 210.0
BYD2_k127_6068228_4 Glycine-zipper domain - - - 0.0000000000000000000000000000000000000006804 157.0
BYD2_k127_6068228_5 protein histidine kinase activity - - - 0.0000000000000000000000000000002338 125.0
BYD2_k127_6068228_6 - - - - 0.00000000000000000000005642 101.0
BYD2_k127_6099633_0 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 510.0
BYD2_k127_6099633_1 ATPase associated with various cellular activities, AAA_5 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005631 410.0
BYD2_k127_6099633_10 Cytochrome c - - - 0.0000000000000000000000000001096 118.0
BYD2_k127_6099633_11 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000000000000000008318 94.0
BYD2_k127_6099633_12 PFAM ATPase family associated with various cellular activities (AAA) - - - 0.0000000003523 60.0
BYD2_k127_6099633_13 Uncharacterized ACR, COG1678 K07735 - - 0.0000004637 59.0
BYD2_k127_6099633_2 Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor K00254 - 1.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003438 400.0
BYD2_k127_6099633_3 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001095 357.0
BYD2_k127_6099633_4 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007406 323.0
BYD2_k127_6099633_5 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002454 300.0
BYD2_k127_6099633_6 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001874 275.0
BYD2_k127_6099633_7 plastoquinol--plastocyanin reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000005413 243.0
BYD2_k127_6099633_8 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000000005863 164.0
BYD2_k127_6099633_9 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000008032 120.0
BYD2_k127_6101784_0 Major facilitator superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007166 547.0
BYD2_k127_6101784_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 336.0
BYD2_k127_6101784_2 Histone methylation protein DOT1 - - - 0.000000000000000000000000000000000000000000000000000005666 196.0
BYD2_k127_6101784_3 PFAM response regulator receiver K07657 - - 0.000000000000000000000897 105.0
BYD2_k127_6101784_4 membrane - - - 0.0009065 44.0
BYD2_k127_6133526_0 Belongs to the IlvD Edd family - - - 4.676e-263 818.0
BYD2_k127_6133526_1 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002064 421.0
BYD2_k127_6133526_2 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 381.0
BYD2_k127_6133526_3 PFAM Bacterial protein of - - - 0.0000000000000000000000000000000000000000000000000000000000000000004684 233.0
BYD2_k127_6133526_4 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.000000000000000000000000000000000000000000000000000000000001611 213.0
BYD2_k127_6133526_5 - - - - 0.000000000000000000000000007842 113.0
BYD2_k127_6155787_0 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005637 415.0
BYD2_k127_6155787_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005661 344.0
BYD2_k127_6155787_2 Uncharacterized conserved protein (DUF2183) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001033 277.0
BYD2_k127_6155787_3 Bacterial periplasmic substrate-binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003829 258.0
BYD2_k127_6155787_4 Putative methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000006905 236.0
BYD2_k127_6171249_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K21307 - 1.8.5.6 3.073e-308 949.0
BYD2_k127_6171249_1 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 5.507e-275 852.0
BYD2_k127_6171249_10 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000000000000003482 203.0
BYD2_k127_6171249_11 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000009004 183.0
BYD2_k127_6171249_12 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000002621 136.0
BYD2_k127_6171249_13 DsrE/DsrF/DrsH-like family - - - 0.000000000004625 66.0
BYD2_k127_6171249_2 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003244 503.0
BYD2_k127_6171249_3 D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1 K01086,K03841 - 3.1.3.11,3.1.3.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001428 487.0
BYD2_k127_6171249_4 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 460.0
BYD2_k127_6171249_5 4Fe-4S binding domain K21308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002984 462.0
BYD2_k127_6171249_6 AAA domain (dynein-related subfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 427.0
BYD2_k127_6171249_7 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 392.0
BYD2_k127_6171249_8 DMSO reductase anchor subunit (DmsC) K21309 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008536 328.0
BYD2_k127_6171249_9 Ribulose bisphosphate carboxylase, small chain K01602 - 4.1.1.39 0.00000000000000000000000000000000000000000000000000008765 196.0
BYD2_k127_6185998_0 GcpE protein K03526 - 1.17.7.1,1.17.7.3 5.194e-198 632.0
BYD2_k127_6185998_1 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001882 558.0
BYD2_k127_6185998_10 Predicted membrane protein (DUF2306) - - - 0.000000000000000000000003662 107.0
BYD2_k127_6185998_2 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008294 404.0
BYD2_k127_6185998_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002521 381.0
BYD2_k127_6185998_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006811 330.0
BYD2_k127_6185998_5 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000002807 248.0
BYD2_k127_6185998_6 type 4 pilus biogenesis protein K02656 - - 0.00000000000000000000000000000000000000000000000000000000000003771 233.0
BYD2_k127_6185998_7 protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000002314 194.0
BYD2_k127_6185998_8 WHG domain - - - 0.000000000000000000000000000000000000000151 156.0
BYD2_k127_6185998_9 Domain of unknown function (DUF4115) K15539 - - 0.0000000000000000000000000000000003969 148.0
BYD2_k127_6236691_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 1.748e-299 933.0
BYD2_k127_6236691_1 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002292 479.0
BYD2_k127_6236691_10 ABC transporter substrate binding protein K01989 - - 0.00000000000000000000000000000000000000000000000000000000000003111 233.0
BYD2_k127_6236691_11 TIGRFAM Urea carboxylase-associated protein 1 K09967 - - 0.000000000000000000000000000000000000000000000000000000000005417 212.0
BYD2_k127_6236691_12 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.00000000000000000000000000000000000000000000000000000000005034 221.0
BYD2_k127_6236691_13 PFAM Dimethylmenaquinone methyltransferase - - - 0.00000000000000000000000000000000000000000002647 169.0
BYD2_k127_6236691_14 Metal binding domain of Ada K10778 - 2.1.1.63 0.000000000000000000000000000000000001256 147.0
BYD2_k127_6236691_15 Adenylate cyclase - - - 0.00000000000000000000000000000001255 132.0
BYD2_k127_6236691_16 Domain of unknown function (DUF3597) - - - 0.0000000000000000000000000000005157 127.0
BYD2_k127_6236691_17 Amidohydrolase - - - 0.0000000000000000000000000834 113.0
BYD2_k127_6236691_18 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000000000001509 108.0
BYD2_k127_6236691_19 two-component response regulator - - - 0.0000000000000000000001531 102.0
BYD2_k127_6236691_2 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006504 381.0
BYD2_k127_6236691_20 Transcriptional regulator - - - 0.000000000000000001805 92.0
BYD2_k127_6236691_3 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 359.0
BYD2_k127_6236691_4 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002508 346.0
BYD2_k127_6236691_5 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family K00058 - 1.1.1.399,1.1.1.95 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000672 300.0
BYD2_k127_6236691_6 Beta-lactamase enzyme family K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002104 284.0
BYD2_k127_6236691_7 Stress-induced protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004032 265.0
BYD2_k127_6236691_8 COG0631 Serine threonine protein phosphatase K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000382 256.0
BYD2_k127_6236691_9 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.000000000000000000000000000000000000000000000000000000000000000001413 237.0
BYD2_k127_6248436_0 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 559.0
BYD2_k127_6248436_1 Belongs to the dCTP deaminase family K01494 - 3.5.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002356 354.0
BYD2_k127_6248436_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001289 362.0
BYD2_k127_6248436_3 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000002233 190.0
BYD2_k127_6248436_4 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.0000000000000002671 78.0
BYD2_k127_6248436_5 response regulator K07715 - - 0.00000008825 55.0
BYD2_k127_6249947_0 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 1.29e-277 864.0
BYD2_k127_6249947_1 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 2.599e-222 702.0
BYD2_k127_6249947_10 Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit K02950 - - 0.00000000000000000000000000000000000000000000000000000000000000001764 224.0
BYD2_k127_6249947_11 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.000000000000000000000000000000000000000000000000000000000002451 209.0
BYD2_k127_6249947_12 2-phosphosulfolactate phosphatase activity K05979 GO:0003674,GO:0003824,GO:0016829,GO:0016830,GO:0016831,GO:0050545 3.1.3.71 0.0000000000000000000000000000000000000000000000000000000001933 211.0
BYD2_k127_6249947_13 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000001217 200.0
BYD2_k127_6249947_14 NUDIX domain K08310 - 3.6.1.67 0.00000000000000000000000000000000000000000000000001483 185.0
BYD2_k127_6249947_15 Protein of unknown function (DUF2946) - - - 0.000000000000000000000000000000000005604 142.0
BYD2_k127_6249947_16 Guanyl-specific ribonuclease Sa - - - 0.00000000000000000000000000000007137 132.0
BYD2_k127_6249947_17 Barstar (barnase inhibitor) - - - 0.0000000001673 71.0
BYD2_k127_6249947_2 Periplasmic binding protein domain K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001398 403.0
BYD2_k127_6249947_3 PFAM ABC transporter related K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004894 378.0
BYD2_k127_6249947_4 Branched-chain amino acid transport system / permease component K01998 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001151 391.0
BYD2_k127_6249947_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001729 366.0
BYD2_k127_6249947_6 Endonuclease Exonuclease phosphatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002045 304.0
BYD2_k127_6249947_7 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000913 285.0
BYD2_k127_6249947_8 Branched-chain amino acid transport system / permease component K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001769 274.0
BYD2_k127_6249947_9 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001858 255.0
BYD2_k127_6270243_0 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 8.227e-229 752.0
BYD2_k127_6270243_1 Belongs to the ABC transporter superfamily K02031,K02032 - - 4.086e-228 723.0
BYD2_k127_6270243_10 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002976 266.0
BYD2_k127_6270243_11 Phosphoglycerate mutase family - - - 0.000000000000000000000000000000000000000000000000000002395 198.0
BYD2_k127_6270243_12 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000008253 167.0
BYD2_k127_6270243_13 - - - - 0.00000000000000000000001451 105.0
BYD2_k127_6270243_14 protein possibly involved in aromatic compounds catabolism - - - 0.00000000000000000002494 104.0
BYD2_k127_6270243_2 N-terminal TM domain of oligopeptide transport permease C K02034 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 605.0
BYD2_k127_6270243_3 Glycosyltransferase family 28 C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003492 567.0
BYD2_k127_6270243_4 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003282 520.0
BYD2_k127_6270243_5 Binding-protein-dependent transport system inner membrane component K02033 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007867 486.0
BYD2_k127_6270243_6 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005881 347.0
BYD2_k127_6270243_7 Glycosyltransferase family 28 C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004946 335.0
BYD2_k127_6270243_8 COGs COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase) K00046 - 1.1.1.69 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002949 317.0
BYD2_k127_6270243_9 Membrane - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004858 309.0
BYD2_k127_6356754_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006315 458.0
BYD2_k127_6356754_1 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 434.0
BYD2_k127_6356754_10 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000001173 184.0
BYD2_k127_6356754_11 MlaC protein K07323 - - 0.00000000000000000000000000000000000000000000000001815 189.0
BYD2_k127_6356754_12 Phospholipase D Active site motif K01115 - 3.1.4.4 0.0000000000000000000000000000000000000000000000001406 187.0
BYD2_k127_6356754_13 Domain of unknown function (DUF4383) - - - 0.00000000000000000000000000000000000000001053 158.0
BYD2_k127_6356754_14 Thermostable hemolysin - - - 0.0000000000000000000000000000000000000007986 154.0
BYD2_k127_6356754_15 Sigma-54 interaction domain K07715 - - 0.0000000000000000001568 89.0
BYD2_k127_6356754_16 UPF0391 membrane protein - - - 0.000000000003477 78.0
BYD2_k127_6356754_17 Bacterioferritin K03594 - 1.16.3.1 0.00002074 47.0
BYD2_k127_6356754_18 Periplasmic or secreted lipoprotein K04065 GO:0005575,GO:0005623,GO:0006457,GO:0006950,GO:0006970,GO:0006972,GO:0008150,GO:0009628,GO:0009987,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0044464,GO:0050896,GO:0061077 - 0.00007058 50.0
BYD2_k127_6356754_19 - - - - 0.00007865 48.0
BYD2_k127_6356754_2 AMP-binding enzyme - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007591 427.0
BYD2_k127_6356754_20 polyketide synthase K16383,K19204,K19207 - - 0.0004845 45.0
BYD2_k127_6356754_3 Two-component sensor kinase N-terminal K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005552 368.0
BYD2_k127_6356754_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 298.0
BYD2_k127_6356754_5 Transcriptional regulatory protein, C terminal K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001914 298.0
BYD2_k127_6356754_6 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004922 261.0
BYD2_k127_6356754_7 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002019 261.0
BYD2_k127_6356754_8 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000026 253.0
BYD2_k127_6356754_9 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000171 244.0
BYD2_k127_6482145_0 Belongs to the IlvD Edd family K01687 GO:0003674,GO:0003824,GO:0004160,GO:0016829,GO:0016835,GO:0016836 4.2.1.9 1.189e-244 767.0
BYD2_k127_6482145_1 PFAM TRAP C4-dicarboxylate transport system permease DctM subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 525.0
BYD2_k127_6482145_10 Class II Aldolase and Adducin N-terminal domain K01628 - 4.1.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000003237 263.0
BYD2_k127_6482145_11 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.00000000000000000000000000000000000000000000000000000000000000000002145 234.0
BYD2_k127_6482145_12 type 4 pilus biogenesis protein K02656 - - 0.0000000000000000000000000000000000000000000000000000000000000002162 245.0
BYD2_k127_6482145_13 17 kDa outer membrane surface antigen - - - 0.00000000000000000000000000000000000000000004883 166.0
BYD2_k127_6482145_14 COG3090 TRAP-type C4-dicarboxylate transport system, small permease component - - - 0.00000000000000000000000003505 114.0
BYD2_k127_6482145_15 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000001682 96.0
BYD2_k127_6482145_16 Helix-turn-helix domain K15539 - - 0.000000000000003327 83.0
BYD2_k127_6482145_2 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005926 522.0
BYD2_k127_6482145_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 501.0
BYD2_k127_6482145_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005329 385.0
BYD2_k127_6482145_5 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000448 296.0
BYD2_k127_6482145_6 Bacterial extracellular solute-binding protein, family 7 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007667 291.0
BYD2_k127_6482145_7 endonuclease III K01247 - 3.2.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000002777 266.0
BYD2_k127_6482145_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000513 267.0
BYD2_k127_6482145_9 HNH endonuclease - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001712 264.0
BYD2_k127_6503194_0 Aldehyde dehydrogenase family K21802 - 1.2.1.67 7.301e-253 786.0
BYD2_k127_6503194_1 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 6.253e-230 733.0
BYD2_k127_6503194_10 Branched-chain amino acid ATP-binding cassette transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 327.0
BYD2_k127_6503194_11 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005924 321.0
BYD2_k127_6503194_12 Branched-chain amino acid transport K01996 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 304.0
BYD2_k127_6503194_13 Fatty acid desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009449 256.0
BYD2_k127_6503194_14 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000005105 254.0
BYD2_k127_6503194_15 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000006148 244.0
BYD2_k127_6503194_16 OmpA-like transmembrane domain - - - 0.00000006158 64.0
BYD2_k127_6503194_2 Bacterial protein of unknown function (DUF853) K06915 - - 5.259e-217 683.0
BYD2_k127_6503194_3 belongs to the aldehyde dehydrogenase family - - - 8.596e-201 639.0
BYD2_k127_6503194_4 protein conserved in bacteria K07192 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0016020,GO:0044424,GO:0044444,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004871 522.0
BYD2_k127_6503194_5 Receptor family ligand binding region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006209 511.0
BYD2_k127_6503194_6 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 383.0
BYD2_k127_6503194_7 PFAM short-chain dehydrogenase reductase SDR K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002705 373.0
BYD2_k127_6503194_8 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001547 376.0
BYD2_k127_6503194_9 transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 356.0
BYD2_k127_6504061_0 Dehydrogenase K00382 - 1.8.1.4 8.669e-264 822.0
BYD2_k127_6504061_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008226 603.0
BYD2_k127_6504061_2 Peptidase dimerisation domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 300.0
BYD2_k127_6504061_3 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 - 5.3.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009376 297.0
BYD2_k127_6504061_4 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002188 287.0
BYD2_k127_6522691_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 5.184e-215 678.0
BYD2_k127_6522691_1 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 6.499e-208 658.0
BYD2_k127_6522691_2 Major facilitator superfamily K08218 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 597.0
BYD2_k127_6522691_3 Rod shape-determining protein MreB K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 404.0
BYD2_k127_6522691_4 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 358.0
BYD2_k127_6522691_5 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 336.0
BYD2_k127_6522691_6 Adenylyl- / guanylyl cyclase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001139 293.0
BYD2_k127_6522691_7 Cell shape determining protein, MreB Mrl family K03569 - - 0.00000000000000000000000000000000000000000000000000000000000000000005987 231.0
BYD2_k127_6522691_8 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.000000000000000000000001652 109.0
BYD2_k127_6522691_9 - - - - 0.00000000000000003698 91.0
BYD2_k127_6543930_0 Histidine Phosphotransfer domain K10715 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003335 566.0
BYD2_k127_6543930_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 532.0
BYD2_k127_6543930_10 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) - - - 0.00000000000000000000000000000000000000000000000001169 187.0
BYD2_k127_6543930_2 HD domain K13815 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004259 419.0
BYD2_k127_6543930_3 Queuosine biosynthesis protein K07568 - 2.4.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000059 381.0
BYD2_k127_6543930_4 Pfam Enoyl-CoA hydratase isomerase K13816 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 345.0
BYD2_k127_6543930_5 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 319.0
BYD2_k127_6543930_6 Deoxynucleoside kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 287.0
BYD2_k127_6543930_7 Iron-containing redox enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000001618 243.0
BYD2_k127_6543930_8 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000006451 204.0
BYD2_k127_6543930_9 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000006949 188.0
BYD2_k127_6544629_0 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 482.0
BYD2_k127_6544629_1 Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005945 448.0
BYD2_k127_6544629_10 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000000005852 122.0
BYD2_k127_6544629_11 Bacterial SH3 domain - - - 0.00000000000000000000000000007894 128.0
BYD2_k127_6544629_12 membrane - - - 0.00000000000000001874 91.0
BYD2_k127_6544629_2 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009371 420.0
BYD2_k127_6544629_3 Glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000334 379.0
BYD2_k127_6544629_4 Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005332 338.0
BYD2_k127_6544629_5 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.0000000000000000000000000000000000000000000000000000000000000000000000007891 254.0
BYD2_k127_6544629_6 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.00000000000000000000000000000000000000000000000000000000001922 209.0
BYD2_k127_6544629_7 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000008324 216.0
BYD2_k127_6544629_8 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000001411 191.0
BYD2_k127_6544629_9 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000005721 143.0
BYD2_k127_6549707_0 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 8.557e-214 676.0
BYD2_k127_6549707_1 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009945 478.0
BYD2_k127_6549707_2 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 GO:0000166,GO:0000226,GO:0001817,GO:0001819,GO:0001906,GO:0001907,GO:0002376,GO:0002791,GO:0002793,GO:0003674,GO:0003824,GO:0004365,GO:0004857,GO:0004866,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005811,GO:0005829,GO:0005856,GO:0005886,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006417,GO:0006464,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0006915,GO:0006950,GO:0006952,GO:0006955,GO:0006959,GO:0006996,GO:0007010,GO:0007017,GO:0008017,GO:0008092,GO:0008150,GO:0008152,GO:0008219,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009435,GO:0009605,GO:0009607,GO:0009620,GO:0009889,GO:0009890,GO:0009892,GO:0009894,GO:0009987,GO:0010033,GO:0010466,GO:0010468,GO:0010506,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0010941,GO:0010942,GO:0010951,GO:0012501,GO:0012505,GO:0015630,GO:0015631,GO:0016020,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016241,GO:0016310,GO:0016491,GO:0016620,GO:0016740,GO:0016769,GO:0016903,GO:0017014,GO:0017144,GO:0017148,GO:0018119,GO:0018130,GO:0018193,GO:0018198,GO:0019222,GO:0019318,GO:0019319,GO:0019320,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019538,GO:0019637,GO:0019674,GO:0019693,GO:0019730,GO:0019752,GO:0019828,GO:0019904,GO:0030162,GO:0030234,GO:0030414,GO:0031090,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031329,GO:0031341,GO:0031343,GO:0031640,GO:0031647,GO:0031965,GO:0031967,GO:0031975,GO:0032268,GO:0032269,GO:0032787,GO:0032879,GO:0032880,GO:0032991,GO:0034097,GO:0034248,GO:0034249,GO:0034341,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035605,GO:0035606,GO:0035821,GO:0036094,GO:0036211,GO:0042221,GO:0042802,GO:0042866,GO:0042981,GO:0043065,GO:0043067,GO:0043068,GO:0043086,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043412,GO:0043436,GO:0043891,GO:0043900,GO:0043902,GO:0043903,GO:0044003,GO:0044004,GO:0044068,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044267,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0044364,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044531,GO:0044532,GO:0044533,GO:0045087,GO:0045861,GO:0046031,GO:0046034,GO:0046364,GO:0046365,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0048037,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050662,GO:0050707,GO:0050708,GO:0050714,GO:0050715,GO:0050789,GO:0050790,GO:0050794,GO:0050821,GO:0050832,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051171,GO:0051172,GO:0051186,GO:0051188,GO:0051222,GO:0051223,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051287,GO:0051336,GO:0051346,GO:0051402,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051709,GO:0051712,GO:0051716,GO:0051817,GO:0051818,GO:0051851,GO:0051852,GO:0051873,GO:0051883,GO:0052040,GO:0052042,GO:0052248,GO:0052330,GO:0052433,GO:0052501,GO:0052547,GO:0052548,GO:0055086,GO:0055114,GO:0060255,GO:0061134,GO:0061135,GO:0061615,GO:0061620,GO:0061621,GO:0061718,GO:0061844,GO:0065007,GO:0065008,GO:0065009,GO:0070201,GO:0070887,GO:0070997,GO:0071310,GO:0071345,GO:0071346,GO:0071704,GO:0071840,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0080090,GO:0090087,GO:0090407,GO:0097159,GO:0097452,GO:0097718,GO:0098542,GO:0098772,GO:0140096,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1903530,GO:1903532,GO:1904951,GO:1990904,GO:2000112,GO:2000113 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000001651 214.0
BYD2_k127_6549707_3 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000003961 175.0
BYD2_k127_6549707_4 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000000002481 177.0
BYD2_k127_6549707_5 PFAM MaoC like domain - - - 0.000000000000000000000000001925 126.0
BYD2_k127_6557357_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 7.631e-234 730.0
BYD2_k127_6557357_1 FAD linked oxidases, C-terminal domain K00102 - 1.1.2.4 7.797e-197 623.0
BYD2_k127_6557357_2 Belongs to the GPI family K01810 - 5.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 467.0
BYD2_k127_6557357_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003017 316.0
BYD2_k127_6557357_4 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000000000000009574 184.0
BYD2_k127_6557357_5 PFAM ribosomal protein L31 K02909 - - 0.0000000000000000000000000003298 119.0
BYD2_k127_6557357_6 YjgF/chorismate_mutase-like, putative endoribonuclease - - - 0.00000000000000000000002162 101.0
BYD2_k127_6557357_7 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000112 89.0
BYD2_k127_6557357_8 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.000000000000000006347 86.0
BYD2_k127_6560560_0 NfeD-like C-terminal, partner-binding K07403 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000329 475.0
BYD2_k127_6560560_1 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 410.0
BYD2_k127_6560560_10 - - - - 0.00000000003637 69.0
BYD2_k127_6560560_11 PFAM Peptidoglycan-binding domain 1 protein K08305 - - 0.000000009253 64.0
BYD2_k127_6560560_12 Ankyrin repeat - - - 0.00002358 49.0
BYD2_k127_6560560_2 Acyl-CoA dehydrogenase, C-terminal domain K16047 - 1.14.14.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003769 415.0
BYD2_k127_6560560_3 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 381.0
BYD2_k127_6560560_4 Belongs to the FPG family K10563 - 3.2.2.23,4.2.99.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 383.0
BYD2_k127_6560560_5 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 362.0
BYD2_k127_6560560_6 PFAM band 7 protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006298 348.0
BYD2_k127_6560560_7 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009117 317.0
BYD2_k127_6560560_8 Mut7-C RNAse domain K09122 - - 0.0000000000000000000000000000000000000000000000000000000000000000001856 241.0
BYD2_k127_6560560_9 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000002285 191.0
BYD2_k127_6566532_0 ABC transporter C-terminal domain K15738 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 620.0
BYD2_k127_6566532_1 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00520,K21739 - 1.16.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003668 612.0
BYD2_k127_6566532_2 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.000000000000000000000000000000000000000000000000000000000000000000000000001582 263.0
BYD2_k127_6566532_3 Topoisomerase DNA binding C4 zinc finger K07448 - - 0.000000000000000000000000000000000000000000006456 170.0
BYD2_k127_6566532_4 DEAD-box RNA helicase possibly involved in RNA degradation. Unwinds dsRNA in both 5'- and 3'-directions, has RNA- dependent ATPase activity K05592 GO:0000166,GO:0003674,GO:0003676,GO:0003723,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0008026,GO:0008144,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009295,GO:0009409,GO:0009628,GO:0009987,GO:0010501,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043590,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0070035,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:0140098,GO:1901265,GO:1901360,GO:1901363 3.6.4.13 0.00009277 45.0
BYD2_k127_656688_0 oxidation-reduction process K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001942 382.0
BYD2_k127_656688_1 aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K03520 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006967 314.0
BYD2_k127_656688_2 CO dehydrogenase flavoprotein domain protein K03519 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000005797 246.0
BYD2_k127_656688_3 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000005548 223.0
BYD2_k127_656688_4 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000969 220.0
BYD2_k127_656688_5 Endoribonuclease L-PSP. Source PGD - - - 0.00000000000000000000000000000005682 141.0
BYD2_k127_656688_6 Protein of unknown function (DUF2795) - - - 0.00000000000003877 74.0
BYD2_k127_656688_7 - - - - 0.000000003118 68.0
BYD2_k127_6574858_0 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0 1378.0
BYD2_k127_6574858_1 PFAM AMP-dependent synthetase and ligase K00666 - - 8.108e-302 954.0
BYD2_k127_6574858_10 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902,K08692 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5,6.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001312 494.0
BYD2_k127_6574858_11 aldo keto reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004885 477.0
BYD2_k127_6574858_12 Chitin synthase K14666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009494 462.0
BYD2_k127_6574858_13 exodeoxyribonuclease III K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001923 322.0
BYD2_k127_6574858_14 Putative methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008546 323.0
BYD2_k127_6574858_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002585 316.0
BYD2_k127_6574858_16 Phenazine biosynthesis-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005326 260.0
BYD2_k127_6574858_17 Protein of unknown function (DUF2889) - - - 0.00000000000000000000000000000000000000000000000000000000000003474 218.0
BYD2_k127_6574858_18 Na H antiporter, MnhB K05566 - - 0.000000000000000000000000000000000000000000000000000000000006661 220.0
BYD2_k127_6574858_19 Na H antiporter, MnhB K05566 - - 0.0000000000000000000000000000000000000000000000000000003229 206.0
BYD2_k127_6574858_2 Respiratory-chain NADH dehydrogenase domain, 51 kDa subunit K00122 - 1.17.1.9 7.063e-265 830.0
BYD2_k127_6574858_20 COG1863 Multisubunit Na H antiporter MnhE subunit K05569 - - 0.000000000000000000000000000000000000000000000000000007234 194.0
BYD2_k127_6574858_21 Belongs to the FPP GGPP synthase family - - - 0.0000000000000000000000000000000000000000000000008617 192.0
BYD2_k127_6574858_22 COG1006 Multisubunit Na H antiporter, MnhC subunit K05567 - - 0.000000000000000000000000000000000000000001594 166.0
BYD2_k127_6574858_23 DoxX family K15977 - - 0.00000000000000000000000000000000000000006054 155.0
BYD2_k127_6574858_24 monovalent cation:proton antiporter activity K05571 - - 0.0000000000000000000000000000000002192 139.0
BYD2_k127_6574858_25 Cold shock protein K03704 - - 0.0000000000000000000000000005937 114.0
BYD2_k127_6574858_26 Multiple resistance and pH regulation protein F K05570 - - 0.000000000000000000000001987 119.0
BYD2_k127_6574858_27 - - - - 0.00000000000000003141 89.0
BYD2_k127_6574858_28 Cytochrome P460 - - - 0.0000000002171 64.0
BYD2_k127_6574858_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 1.056e-214 676.0
BYD2_k127_6574858_4 Proton-conducting membrane transporter K05568 - - 3.974e-207 658.0
BYD2_k127_6574858_5 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000413 644.0
BYD2_k127_6574858_6 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009352 582.0
BYD2_k127_6574858_7 O-methyltransferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001497 584.0
BYD2_k127_6574858_8 Proton-conducting membrane transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004715 559.0
BYD2_k127_6574858_9 Formate--tetrahydrofolate ligase K01938 - 6.3.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003664 533.0
BYD2_k127_6576691_0 Penicillin-binding protein 2 K05515 - 3.4.16.4 4.723e-255 802.0
BYD2_k127_6576691_1 Isocitrate lyase K01637 - 4.1.3.1 2.856e-225 704.0
BYD2_k127_6576691_10 Belongs to the UPF0235 family K09131 - - 0.00000000000000002398 86.0
BYD2_k127_6576691_11 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 0.00000000000001221 76.0
BYD2_k127_6576691_2 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.079e-219 690.0
BYD2_k127_6576691_3 Rod shape-determining protein MreB K03569 - - 8.743e-203 634.0
BYD2_k127_6576691_4 Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation K00906 - 2.7.11.5 3.433e-199 644.0
BYD2_k127_6576691_5 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 471.0
BYD2_k127_6576691_6 Involved in formation and maintenance of cell shape K03570 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001321 284.0
BYD2_k127_6576691_7 rod shape-determining protein MreD K03571 - - 0.000000000000000000000000000000000000000003296 162.0
BYD2_k127_6576691_8 integral membrane protein K02221 - - 0.00000000000000000000000000000000008275 138.0
BYD2_k127_6576691_9 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.0000000000000000000000000007302 116.0
BYD2_k127_658419_0 Peptidase family M41 K03798 - - 1.063e-223 706.0
BYD2_k127_658419_1 Probable molybdopterin binding domain K03750 - 2.10.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005048 478.0
BYD2_k127_658419_2 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 288.0
BYD2_k127_658419_3 Molybdopterin converting factor, large subunit K03635 - 2.8.1.12 0.00000000000000000000000000000000000000000000000000001425 198.0
BYD2_k127_658419_4 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000000001509 166.0
BYD2_k127_658419_5 Uncharacterized ACR, COG1993 - - - 0.00000000000000000000000000000000004778 136.0
BYD2_k127_6585239_0 o-acetylhomoserine K01740 - 2.5.1.49 2.916e-208 654.0
BYD2_k127_6585239_1 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006594 449.0
BYD2_k127_6585239_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000632 377.0
BYD2_k127_6585239_3 PFAM multi antimicrobial extrusion protein MatE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 358.0
BYD2_k127_6585239_4 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002282 263.0
BYD2_k127_6585239_5 VanZ like family - - - 0.000000000000000000000003413 111.0
BYD2_k127_6585239_6 - - - - 0.000003517 51.0
BYD2_k127_659059_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 1.84e-260 816.0
BYD2_k127_659059_1 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005882 556.0
BYD2_k127_659059_2 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 426.0
BYD2_k127_659059_3 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001172 336.0
BYD2_k127_659059_4 Methyladenine glycosylase K01246 - 3.2.2.20 0.000000000000000000000000000000000000000000000000000000000000000002262 229.0
BYD2_k127_659059_5 Belongs to the ompA family - - - 0.0000000000000000000000000000000000000000000000000000291 198.0
BYD2_k127_659059_6 protein conserved in bacteria K09790 - - 0.0000000000000000000000000000000001874 136.0
BYD2_k127_6603654_0 Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 5.223e-297 941.0
BYD2_k127_6603654_1 Acyl-CoA dehydrogenase, C-terminal domain K00249 - 1.3.8.7 3.553e-203 643.0
BYD2_k127_6603654_10 Isocitrate lyase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 361.0
BYD2_k127_6603654_11 amino acid K01996,K11958 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 323.0
BYD2_k127_6603654_12 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 325.0
BYD2_k127_6603654_13 PFAM ABC transporter related K01995,K10822 - 3.6.3.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003887 333.0
BYD2_k127_6603654_14 citrate synthase K01647 - 2.3.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004862 312.0
BYD2_k127_6603654_15 AhpC/TSA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002533 266.0
BYD2_k127_6603654_16 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009412 263.0
BYD2_k127_6603654_17 D-isomer specific 2-hydroxyacid dehydrogenase K00058 - 1.1.1.399,1.1.1.95 0.00000000000000000000000000000000000000000000000000000000000000000000008764 250.0
BYD2_k127_6603654_18 Belongs to the LeuD family K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000142 180.0
BYD2_k127_6603654_2 CoA binding domain - - - 8.403e-195 624.0
BYD2_k127_6603654_3 PFAM amidohydrolase K01464,K01466 - 3.5.2.2,3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009829 612.0
BYD2_k127_6603654_4 Extracellular liganD-binding receptor K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 578.0
BYD2_k127_6603654_5 Aconitase family (aconitate hydratase) K01703 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 574.0
BYD2_k127_6603654_6 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004006 522.0
BYD2_k127_6603654_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004299 447.0
BYD2_k127_6603654_8 PFAM Short-chain dehydrogenase reductase SDR - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 435.0
BYD2_k127_6603654_9 Belongs to the binding-protein-dependent transport system permease family K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003131 392.0
BYD2_k127_6619865_0 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.0 1278.0
BYD2_k127_6619865_1 Cobalamin-independent synthase, Catalytic domain K00549 - 2.1.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005607 310.0
BYD2_k127_6619865_2 4-alpha-glucanotransferase - - - 0.00000000000000000000000000000000000000000000000000000001325 204.0
BYD2_k127_6632683_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 7.059e-247 773.0
BYD2_k127_6632683_1 acyl-CoA dehydrogenase K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 557.0
BYD2_k127_6632683_10 pilus assembly protein major pilin PilA K02650,K02655 - - 0.000000000002893 75.0
BYD2_k127_6632683_2 Nitrile hydratase K01721,K20807 - 4.2.1.84 0.000000000000000000000000000000000000000000000000000000000000000000000000009923 260.0
BYD2_k127_6632683_3 Allophanate hydrolase subunit 2 K06350 - - 0.00000000000000000000000000000000000000000000000000000000000000000000003078 261.0
BYD2_k127_6632683_4 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000008867 208.0
BYD2_k127_6632683_5 Allophanate hydrolase subunit 2 - - - 0.0000000000000000000000000000000000000000000000000005292 192.0
BYD2_k127_6632683_6 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000000000000000000000000000001026 146.0
BYD2_k127_6632683_7 Glyoxalase-like domain - - - 0.000000000000000000000001984 113.0
BYD2_k127_6632683_8 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.000000000000000000003121 101.0
BYD2_k127_6632683_9 Nitrile hydratase beta subunit K20807 - 4.2.1.84 0.00000000000001213 81.0
BYD2_k127_666683_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 - - 1.603e-290 904.0
BYD2_k127_666683_1 Oligopeptide/dipeptide transporter, C-terminal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002632 466.0
BYD2_k127_666683_2 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002508 239.0
BYD2_k127_666683_3 Belongs to the HesB IscA family K13628 - - 0.00000000000000000000000000000000000000000000000008258 186.0
BYD2_k127_666683_4 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000000004641 181.0
BYD2_k127_666683_5 ferredoxin, 2Fe-2S type K04755 - - 0.00000000000000000000000000000000000000000000002557 171.0
BYD2_k127_666683_6 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000006897 112.0
BYD2_k127_666683_7 FeS assembly protein IscX - - - 0.0000000000000000000000007581 109.0
BYD2_k127_66750_0 electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 1.613e-244 765.0
BYD2_k127_66750_1 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003145 516.0
BYD2_k127_66750_2 MscS Mechanosensitive ion channel - - - 0.00000000000000000000000000000000000000000000000000000000000000001579 236.0
BYD2_k127_66750_3 membrane - - - 0.00000000000000000000000000000000000000000838 156.0
BYD2_k127_66750_4 Thioesterase-like superfamily K07107 - - 0.000000000000002288 78.0
BYD2_k127_6709494_0 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009155 252.0
BYD2_k127_6709494_1 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001219 254.0
BYD2_k127_6709494_10 Peptidase S24-like - - - 0.00000000000000000009681 92.0
BYD2_k127_6709494_11 - - - - 0.0000000000000000009512 95.0
BYD2_k127_6709494_12 part of a sulfur-relay system K11179 GO:0002097,GO:0002098,GO:0002143,GO:0003674,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0034227,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097163,GO:0140104,GO:1901360 - 0.000000000000000001437 89.0
BYD2_k127_6709494_2 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000007332 233.0
BYD2_k127_6709494_3 - - - - 0.000000000000000000000000000000000000000000000000000000000002531 212.0
BYD2_k127_6709494_4 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.0000000000000000000000000000000000000000000000000000000005645 205.0
BYD2_k127_6709494_5 TIGRFAM CRISPR-associated protein - - - 0.00000000000000000000000000000000000000000000000006299 193.0
BYD2_k127_6709494_6 Sel1-like repeats. K07126 - - 0.0000000000000000000000000000000000000000000000276 173.0
BYD2_k127_6709494_7 part of a sulfur-relay system K11179 - - 0.00000000000000000000000000000000000000005864 154.0
BYD2_k127_6709494_8 - - - - 0.000000000000000000000000000001411 124.0
BYD2_k127_6709494_9 - - - - 0.00000000000000000007956 90.0
BYD2_k127_6711471_0 Kef-type K transport - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008948 567.0
BYD2_k127_6711471_1 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000002704 194.0
BYD2_k127_6711471_2 - - - - 0.00000000000000000000000000000000000000000001735 166.0
BYD2_k127_6711471_3 Belongs to the small heat shock protein (HSP20) family - - - 0.0000000000000000000000000000000000000005112 152.0
BYD2_k127_674669_0 Secretin and TonB N terminus short domain K02453 - - 1.283e-201 648.0
BYD2_k127_674669_1 ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 326.0
BYD2_k127_674669_10 Uncharacterized protein conserved in bacteria (DUF2332) - - - 0.00000000000000000000005286 111.0
BYD2_k127_674669_11 - - - - 0.00007463 45.0
BYD2_k127_674669_2 Bacterial transferase hexapeptide (six repeats) K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000004437 209.0
BYD2_k127_674669_3 prepilin-type N-terminal cleavage methylation K02456 - - 0.0000000000000000000000000000000000000000000000000000002831 196.0
BYD2_k127_674669_4 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000003362 206.0
BYD2_k127_674669_5 WbqC-like protein family - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000326 195.0
BYD2_k127_674669_6 Type II secretory pathway, pseudopilin - - - 0.00000000000000000000000000000000000000003559 157.0
BYD2_k127_674669_7 Methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000009216 131.0
BYD2_k127_674669_8 type II secretion system protein G K02456 - - 0.0000000000000000000000000000456 136.0
BYD2_k127_674669_9 GlcNAc-PI de-N-acetylase - - - 0.000000000000000000000000009952 124.0
BYD2_k127_6828177_0 His Kinase A (phospho-acceptor) domain K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004266 364.0
BYD2_k127_6828177_1 AAA domain - - - 0.000000000000000000000000000007878 130.0
BYD2_k127_6828177_2 Belongs to the mannose-6-phosphate isomerase type 2 family K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000000000005773 107.0
BYD2_k127_6828177_3 Putative beta-barrel porin 2 - - - 0.0000000000000000000005154 109.0
BYD2_k127_6828177_4 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000002827 76.0
BYD2_k127_6828177_5 response regulator K07715 - - 0.000000009546 57.0
BYD2_k127_6845860_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 7.094e-197 620.0
BYD2_k127_6845860_1 Catalyzes the reversible formation of acyl-phosphate (acyl-PO(4)) from acyl- acyl-carrier-protein (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA K03621 - 2.3.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009242 430.0
BYD2_k127_6845860_10 Uroporphyrin-III C tetrapyrrole K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000001933 233.0
BYD2_k127_6845860_11 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 1 K01091 - 3.1.3.18 0.000000000000000000000000000000000000000000000000000000000000000009123 231.0
BYD2_k127_6845860_12 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000000000006135 207.0
BYD2_k127_6845860_13 rieske 2fe-2s - - - 0.000000000000000000000000000000000001004 143.0
BYD2_k127_6845860_14 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000001433 133.0
BYD2_k127_6845860_15 metal-binding, possibly nucleic acid-binding protein K07040 - - 0.000000000000000000000000000335 122.0
BYD2_k127_6845860_16 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000000001469 106.0
BYD2_k127_6845860_17 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.00000000000000000000004717 106.0
BYD2_k127_6845860_2 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004621 433.0
BYD2_k127_6845860_3 malonyl CoA-acyl carrier protein transacylase K00645,K15355 - 2.3.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001294 397.0
BYD2_k127_6845860_4 Peptidase family S49 K04773 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004795 393.0
BYD2_k127_6845860_5 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 376.0
BYD2_k127_6845860_6 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005271 360.0
BYD2_k127_6845860_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005275 317.0
BYD2_k127_6845860_8 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005988 329.0
BYD2_k127_6845860_9 Sigma E regulatory protein, MucB RseB K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001068 270.0
BYD2_k127_6865569_0 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001069 475.0
BYD2_k127_6865569_1 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000326 273.0
BYD2_k127_6865569_2 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000748 273.0
BYD2_k127_6865569_3 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000003602 237.0
BYD2_k127_6865569_4 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000001688 184.0
BYD2_k127_6865569_5 Glutathione S-transferase, C-terminal domain - - - 0.000000000000000000000000121 109.0
BYD2_k127_686920_0 GTP-binding protein TypA K06207 - - 2.541e-307 951.0
BYD2_k127_686920_1 phosphoribosylaminoimidazolesuccinocarboxamide synthase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000802 443.0
BYD2_k127_686920_2 PFAM Fructose-bisphosphate aldolase, class-I K01623 - 4.1.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 394.0
BYD2_k127_686920_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine K07566 - 2.7.7.87 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 320.0
BYD2_k127_686920_4 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.00000000000000000000000000000000000000000000000000000000000135 216.0
BYD2_k127_686920_5 NlpC/P60 family K19303 - - 0.0000000000000000000000000007599 121.0
BYD2_k127_686920_6 Flavin containing amine oxidoreductase - - - 0.000000000001341 68.0
BYD2_k127_6906154_0 AMP-binding enzyme C-terminal domain K00666 - - 3.928e-206 646.0
BYD2_k127_6906154_1 FAD dependent oxidoreductase K00244 - 1.3.5.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 524.0
BYD2_k127_6906154_2 PFAM Enoyl-CoA hydratase isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007122 271.0
BYD2_k127_6906154_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000035 262.0
BYD2_k127_6906154_4 PFAM amidohydrolase K01464,K01466 - 3.5.2.2,3.5.2.5 0.0000000000000000000000000000000000000000000000000000000000000000000002583 240.0
BYD2_k127_6906154_5 Tellurite resistance protein TerB - - - 0.00000000000000000004955 95.0
BYD2_k127_6918179_0 Malic enzyme, NAD binding domain K00027,K00029 - 1.1.1.38,1.1.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005068 603.0
BYD2_k127_6918179_1 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K01897 - 6.2.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008387 556.0
BYD2_k127_6918179_2 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004977 405.0
BYD2_k127_6918179_3 Phosphoribosyl transferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004896 276.0
BYD2_k127_6918179_4 Ribose-phosphate pyrophosphokinase K00948 - 2.7.6.1 0.0000000000000000000000000000000000000000000000000001398 210.0
BYD2_k127_6919493_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004097 346.0
BYD2_k127_6919493_1 DsrE/DsrF/DrsH-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004218 251.0
BYD2_k127_6919493_2 Sulfurtransferase TusA - - - 0.000000000000000000000000000000000000000000000000000006793 194.0
BYD2_k127_6919493_4 DsrC like protein - - - 0.00000000000000000000000000000000004863 145.0
BYD2_k127_6919493_5 Sulfurtransferase TusA K04085 - - 0.000000000000000000000000000000001299 130.0
BYD2_k127_6919493_6 Sel1-like repeats. K07126 - - 0.00000000000000000000000000007462 117.0
BYD2_k127_6919493_7 Metal-sensitive transcriptional repressor K21600 - - 0.0000000000003674 77.0
BYD2_k127_6928675_0 G-rich domain on putative tyrosine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002342 320.0
BYD2_k127_6928675_1 Polysaccharide biosynthesis/export protein K01991 - - 0.00000000000000000000000000000000000000000000000000000000000003771 233.0
BYD2_k127_6928675_2 AAA domain K08252,K16692 - 2.7.10.1 0.000000000000000000000000000000000000000000000002478 190.0
BYD2_k127_6928675_3 SurA N-terminal domain - - - 0.0000000000000000000000000000000000000001045 164.0
BYD2_k127_6928675_4 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000001505 120.0
BYD2_k127_696_0 TRAP transporter, 4TM 12TM fusion protein - - - 4.786e-227 721.0
BYD2_k127_696_1 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749,K14471,K14472 - 2.8.3.16,2.8.3.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000642 514.0
BYD2_k127_696_2 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001074 477.0
BYD2_k127_696_3 TRAP transporter solute receptor TAXI family protein K07080 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003829 269.0
BYD2_k127_696_4 Maleate cis-trans isomerase K01799 - 5.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000004459 272.0
BYD2_k127_696_5 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002988 269.0
BYD2_k127_696_6 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000001455 203.0
BYD2_k127_696_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.000000000000000000000000000000000000000000000000396 178.0
BYD2_k127_696_8 N-terminal half of MaoC dehydratase - - - 0.000000000000000000000000000000000000000000002223 179.0
BYD2_k127_696_9 Two component transcriptional regulator, LuxR family - - - 0.000000000001309 72.0
BYD2_k127_704392_0 Belongs to the IlvD Edd family K01687,K22186 - 4.2.1.82,4.2.1.9 2.276e-282 876.0
BYD2_k127_704392_1 Metallopeptidase family M24 - - - 6.198e-209 658.0
BYD2_k127_704392_10 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003867 319.0
BYD2_k127_704392_11 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003265 304.0
BYD2_k127_704392_12 Tripartite tricarboxylate transporter family receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008101 296.0
BYD2_k127_704392_13 Belongs to the MraZ family K03925 - - 0.000000000000000000000000000000000000000113 156.0
BYD2_k127_704392_14 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000000000001459 98.0
BYD2_k127_704392_15 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01032 - 2.8.3.6 0.00000000000000000001696 97.0
BYD2_k127_704392_2 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 1.028e-207 668.0
BYD2_k127_704392_3 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003312 475.0
BYD2_k127_704392_4 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 - 6.3.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001225 469.0
BYD2_k127_704392_5 Belongs to the LDH2 MDH2 oxidoreductase family K13574 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004736 453.0
BYD2_k127_704392_6 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005982 375.0
BYD2_k127_704392_7 TIGRFAM 3-oxoacid CoA-transferase, B subunit K01032 - 2.8.3.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 360.0
BYD2_k127_704392_8 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004176 357.0
BYD2_k127_704392_9 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009796 343.0
BYD2_k127_7077718_0 ATP-dependent DNA ligase K01971 - 6.5.1.1 2.041e-239 763.0
BYD2_k127_7077718_1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 4.628e-215 675.0
BYD2_k127_7077718_10 - - - - 0.00000000000000000000003905 106.0
BYD2_k127_7077718_12 BON domain K04065 - - 0.000000000003055 72.0
BYD2_k127_7077718_13 UPF0391 membrane protein - - - 0.0000000000075 73.0
BYD2_k127_7077718_2 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 614.0
BYD2_k127_7077718_3 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 522.0
BYD2_k127_7077718_4 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 285.0
BYD2_k127_7077718_5 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.000000000000000000000000000000000000000000000000000000000000000001211 233.0
BYD2_k127_7077718_6 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000000000000002607 205.0
BYD2_k127_7077718_7 Diguanylate cyclase - - - 0.00000000000000000000000000000000001529 147.0
BYD2_k127_7077718_8 - - - - 0.0000000000000000000000000000000003015 138.0
BYD2_k127_7077718_9 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000000000003091 107.0
BYD2_k127_7132391_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002943 563.0
BYD2_k127_7132391_1 Isocitrate/isopropylmalate dehydrogenase K07246 - 1.1.1.83,1.1.1.93,4.1.1.73 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 554.0
BYD2_k127_7132391_10 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770,K12506 - 2.7.7.60,4.6.1.12 0.00000000000000000000000000000000000000000000000000000000000000002256 226.0
BYD2_k127_7132391_11 Glycoprotease family K14742 - - 0.0000000000000000000000000000000000000000000000000000000000009917 216.0
BYD2_k127_7132391_12 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.0000000000000000000000000000000000000000000000000000000004431 208.0
BYD2_k127_7132391_13 This enzyme acetylates the N-terminal alanine of ribosomal protein S18 K03789,K14742 - 2.3.1.128 0.000000000000000000000000000000000000002688 164.0
BYD2_k127_7132391_14 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.00000000000000000000000000000001767 136.0
BYD2_k127_7132391_15 Major facilitator superfamily - - - 0.000000004149 59.0
BYD2_k127_7132391_2 Tartrate dehydrogenase K07246 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.83,1.1.1.93,4.1.1.73 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004598 477.0
BYD2_k127_7132391_3 Periplasmic domain of Sensor histidine kinase RisS K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003521 389.0
BYD2_k127_7132391_4 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 343.0
BYD2_k127_7132391_5 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005757 325.0
BYD2_k127_7132391_6 Permeases of the drug metabolite transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001181 301.0
BYD2_k127_7132391_7 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003463 298.0
BYD2_k127_7132391_8 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000004408 244.0
BYD2_k127_7132391_9 SMP-30 Gluconolaconase K14274 - - 0.00000000000000000000000000000000000000000000000000000000000000000001598 244.0
BYD2_k127_7146103_0 NADH flavin oxidoreductase NADH oxidase K00219 - 1.3.1.34 4.846e-228 722.0
BYD2_k127_7146103_1 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 3.938e-204 648.0
BYD2_k127_7146103_2 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000001998 233.0
BYD2_k127_7155513_0 Luciferase-like monooxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 532.0
BYD2_k127_7155513_1 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 329.0
BYD2_k127_7155513_2 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000006294 270.0
BYD2_k127_7155513_3 Receptor family ligand binding region K01999 - - 0.0000000000000000000000000000000000000000000000000000000000001934 220.0
BYD2_k127_7155513_4 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000005201 55.0
BYD2_k127_7180993_0 Elongator protein 3, MiaB family, Radical SAM - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001589 440.0
BYD2_k127_7180993_1 Putative serine dehydratase domain K18425 - 4.1.3.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005538 410.0
BYD2_k127_7180993_2 Major facilitator superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001461 366.0
BYD2_k127_7180993_3 Major facilitator superfamily MFS_1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003897 334.0
BYD2_k127_7180993_4 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000001058 206.0
BYD2_k127_7180993_5 PFAM FAD dependent oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000001293 191.0
BYD2_k127_7180993_6 MatE - - - 0.0000000000000000000000000000000000000000000001075 181.0
BYD2_k127_7180993_7 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000004067 134.0
BYD2_k127_7180993_8 polyketide cyclase - - - 0.00000000000000000000000000006043 119.0
BYD2_k127_7182864_0 aldehyde oxidase and xanthine dehydrogenase, a b hammerhead K03520 - 1.2.5.3 1.112e-249 781.0
BYD2_k127_7182864_1 PFAM ABC transporter related K02049 - - 0.000000000000000000000000000000000000000000000000000000000000000000000006331 261.0
BYD2_k127_7182864_2 ABC-type nitrate sulfonate bicarbonate transport system permease component K15554 - - 0.000000000000000000000000000000000000000000001174 178.0
BYD2_k127_7182864_3 Binding-protein-dependent transport system inner membrane component K02050,K15552 - - 0.000000000000000000000000000000000000000000004999 182.0
BYD2_k127_7236491_0 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain - - - 1.333e-219 709.0
BYD2_k127_7236491_1 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K15509 - 1.1.1.308 1.221e-211 664.0
BYD2_k127_7236491_2 3-hydroxyacyl-CoA dehydrogenase K00074 - 1.1.1.157 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 589.0
BYD2_k127_7236491_3 Belongs to the citrate synthase family K01647,K01659 - 2.3.3.1,2.3.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001581 574.0
BYD2_k127_7236491_4 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005421 567.0
BYD2_k127_7236491_5 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 372.0
BYD2_k127_7236491_6 phosphate acetyltransferase K00625 - 2.3.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006113 312.0
BYD2_k127_7236491_7 Acyl-CoA dehydrogenase, middle domain K00252 - 1.3.8.6 0.0000000000000000000000000000000000000000000000000000000000000000001214 230.0
BYD2_k127_7236491_8 Universal stress protein family - - - 0.0000000000000000000000000000000000000006344 155.0
BYD2_k127_7236491_9 TIGRFAM TRAP transporter, DctM subunit - - - 0.0000007452 50.0
BYD2_k127_7260002_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1273.0
BYD2_k127_7260002_1 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000001735 237.0
BYD2_k127_7260002_2 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000001403 179.0
BYD2_k127_7260002_3 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.00000000000000000000000000000000000001139 150.0
BYD2_k127_729738_0 glutamine synthetase K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 1.141e-233 730.0
BYD2_k127_729738_1 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 334.0
BYD2_k127_729738_2 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 304.0
BYD2_k127_729738_3 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001046 301.0
BYD2_k127_729738_4 PFAM Metal-dependent phosphohydrolase, HD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009437 295.0
BYD2_k127_729738_5 Serine aminopeptidase, S33 K06889 - - 0.0000000000000000000000000000000000000000000000000000001214 216.0
BYD2_k127_729738_6 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000003513 168.0
BYD2_k127_7297451_0 COG1902 NADH flavin oxidoreductases, Old Yellow Enzyme family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009377 443.0
BYD2_k127_7297451_1 Belongs to the UPF0271 (lamB) family K07160 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009817 326.0
BYD2_k127_7297451_2 Allophanate hydrolase subunit 2 K06350 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002145 269.0
BYD2_k127_7297451_3 Allophanate hydrolase subunit 1 - - - 0.00000000000000000000000000000000000000000000000000006376 195.0
BYD2_k127_7297451_4 Nitrile hydratase K01721,K20807 - 4.2.1.84 0.00000000000000000000000000000003741 126.0
BYD2_k127_7297451_5 pilus assembly protein major pilin PilA K02650,K02655 - - 0.0000000000008573 77.0
BYD2_k127_7299666_0 FAD binding domain K00481 - 1.14.13.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003295 449.0
BYD2_k127_7299666_1 PFAM Extradiol ring-cleavage dioxygenase class III protein subunit B K04101 - 1.13.11.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003871 398.0
BYD2_k127_7299666_10 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000005639 85.0
BYD2_k127_7299666_2 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002297 394.0
BYD2_k127_7299666_3 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002675 328.0
BYD2_k127_7299666_4 Aldolase/RraA K02553,K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002198 291.0
BYD2_k127_7299666_5 Fumarylacetoacetate (FAA) hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008131 245.0
BYD2_k127_7299666_6 4,5-dihydroxyphthalate decarboxylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000007473 249.0
BYD2_k127_7299666_7 - - - - 0.00000000000000000000000000000000271 136.0
BYD2_k127_7299666_8 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000002458 128.0
BYD2_k127_7299666_9 Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols K04099,K04101 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0008198,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0036238,GO:0042537,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.57,1.13.11.8 0.000000000000000000000426 107.0
BYD2_k127_7332593_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1206.0
BYD2_k127_7332593_1 dna topoisomerase III K03169 - 5.99.1.2 0.0 1095.0
BYD2_k127_7332593_10 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000147 564.0
BYD2_k127_7332593_11 Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family K00111 - 1.1.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000955 536.0
BYD2_k127_7332593_12 L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000433 526.0
BYD2_k127_7332593_13 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 472.0
BYD2_k127_7332593_14 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000274 442.0
BYD2_k127_7332593_15 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 436.0
BYD2_k127_7332593_16 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 405.0
BYD2_k127_7332593_17 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 410.0
BYD2_k127_7332593_18 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 409.0
BYD2_k127_7332593_19 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 383.0
BYD2_k127_7332593_2 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 GO:0000003,GO:0001655,GO:0001822,GO:0001889,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003824,GO:0004457,GO:0004611,GO:0004613,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0005975,GO:0005996,GO:0006006,GO:0006007,GO:0006066,GO:0006071,GO:0006082,GO:0006089,GO:0006090,GO:0006091,GO:0006094,GO:0006109,GO:0006111,GO:0006113,GO:0006139,GO:0006163,GO:0006464,GO:0006629,GO:0006631,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006735,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007296,GO:0007610,GO:0008150,GO:0008152,GO:0008906,GO:0009056,GO:0009058,GO:0009062,GO:0009117,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009166,GO:0009167,GO:0009179,GO:0009185,GO:0009199,GO:0009205,GO:0009259,GO:0009410,GO:0009605,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009792,GO:0009887,GO:0009888,GO:0009889,GO:0009966,GO:0009967,GO:0009987,GO:0009991,GO:0010033,GO:0010243,GO:0010646,GO:0010647,GO:0010675,GO:0010906,GO:0014070,GO:0014074,GO:0015036,GO:0015980,GO:0016042,GO:0016043,GO:0016051,GO:0016052,GO:0016053,GO:0016054,GO:0016301,GO:0016310,GO:0016491,GO:0016614,GO:0016651,GO:0016667,GO:0016668,GO:0016740,GO:0016772,GO:0016773,GO:0016829,GO:0016830,GO:0016831,GO:0016999,GO:0017001,GO:0017144,GO:0018130,GO:0018991,GO:0019098,GO:0019222,GO:0019249,GO:0019318,GO:0019319,GO:0019320,GO:0019362,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019516,GO:0019538,GO:0019541,GO:0019543,GO:0019563,GO:0019626,GO:0019637,GO:0019659,GO:0019660,GO:0019661,GO:0019666,GO:0019674,GO:0019693,GO:0019751,GO:0019752,GO:0019953,GO:0022412,GO:0022414,GO:0023051,GO:0023056,GO:0030145,GO:0030154,GO:0030703,GO:0030855,GO:0031323,GO:0031667,GO:0031960,GO:0031974,GO:0032501,GO:0032502,GO:0032504,GO:0032787,GO:0032868,GO:0032869,GO:0032870,GO:0033993,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035690,GO:0036211,GO:0042221,GO:0042493,GO:0042594,GO:0042737,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043255,GO:0043412,GO:0043434,GO:0043436,GO:0043687,GO:0043900,GO:0043903,GO:0043949,GO:0043950,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044267,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045471,GO:0046031,GO:0046034,GO:0046164,GO:0046174,GO:0046364,GO:0046365,GO:0046394,GO:0046395,GO:0046434,GO:0046459,GO:0046483,GO:0046496,GO:0046677,GO:0046683,GO:0046700,GO:0046872,GO:0046914,GO:0047134,GO:0048468,GO:0048477,GO:0048513,GO:0048518,GO:0048522,GO:0048545,GO:0048562,GO:0048568,GO:0048583,GO:0048584,GO:0048598,GO:0048609,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051186,GO:0051384,GO:0051591,GO:0051704,GO:0051716,GO:0055086,GO:0055114,GO:0060429,GO:0061005,GO:0061008,GO:0062012,GO:0065007,GO:0070013,GO:0070365,GO:0070887,GO:0071236,GO:0071310,GO:0071361,GO:0071375,GO:0071383,GO:0071384,GO:0071385,GO:0071396,GO:0071407,GO:0071417,GO:0071466,GO:0071495,GO:0071548,GO:0071549,GO:0071704,GO:0071840,GO:0072001,GO:0072071,GO:0072329,GO:0072330,GO:0072521,GO:0072524,GO:0080090,GO:0097159,GO:0097237,GO:0097305,GO:0097306,GO:0097327,GO:1901135,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901575,GO:1901576,GO:1901615,GO:1901616,GO:1901617,GO:1901652,GO:1901653,GO:1901654,GO:1901655,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902531,GO:1902533 4.1.1.32 6.332e-297 921.0
BYD2_k127_7332593_20 PFAM Cobyrinic acid a,c-diamide synthase K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 374.0
BYD2_k127_7332593_21 Histidine kinase K07641 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001315 354.0
BYD2_k127_7332593_22 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009696 332.0
BYD2_k127_7332593_23 PFAM Peptidoglycan-binding LysM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 332.0
BYD2_k127_7332593_24 Two component transcriptional regulator, winged helix family K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000585 318.0
BYD2_k127_7332593_25 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008979 312.0
BYD2_k127_7332593_26 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 305.0
BYD2_k127_7332593_27 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000001006 228.0
BYD2_k127_7332593_28 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.0000000000000000000000000000000000000000000000000002897 195.0
BYD2_k127_7332593_29 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02109 - - 0.00000000000000000000000000000000000000000000001904 175.0
BYD2_k127_7332593_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.882e-288 896.0
BYD2_k127_7332593_30 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.0000000000000000000000000000000000000000000003012 180.0
BYD2_k127_7332593_31 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000003138 170.0
BYD2_k127_7332593_32 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000005895 169.0
BYD2_k127_7332593_33 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.000000000000000000000000000000000003461 139.0
BYD2_k127_7332593_34 Belongs to the Smg family K03747 - - 0.0000000000000000000000000000000005128 136.0
BYD2_k127_7332593_35 Protein of unknown function (DUF423) - - - 0.000000000000000000000000001261 115.0
BYD2_k127_7332593_36 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.00000000000000000000000008426 109.0
BYD2_k127_7332593_37 ATP synthase I chain K02116 - - 0.0000000000000000005717 91.0
BYD2_k127_7332593_38 Binding-protein-dependent transport system inner membrane component K02034 - - 0.000000000000000003649 84.0
BYD2_k127_7332593_39 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000001482 68.0
BYD2_k127_7332593_4 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 5.118e-277 857.0
BYD2_k127_7332593_40 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.000000001943 65.0
BYD2_k127_7332593_5 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 7.004e-263 815.0
BYD2_k127_7332593_6 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation - - - 3.677e-210 676.0
BYD2_k127_7332593_7 PFAM TrkA-N domain protein K03499 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004277 612.0
BYD2_k127_7332593_8 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004464 588.0
BYD2_k127_7332593_9 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001338 580.0
BYD2_k127_7473721_0 DEAD/H associated K03724 - - 0.0 1440.0
BYD2_k127_7473721_1 PFAM glutamine synthetase catalytic region K01915 - 6.3.1.2 5.296e-219 686.0
BYD2_k127_7473721_2 acyl-CoA dehydrogenase K00248 - 1.3.8.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 559.0
BYD2_k127_7473721_3 KR domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005784 375.0
BYD2_k127_7473721_4 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001003 294.0
BYD2_k127_7473721_5 FtsJ-like methyltransferase K02427 - 2.1.1.166 0.0000000000000000000000000000000000000000000000000000000000146 215.0
BYD2_k127_7473721_6 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 0.0000000000000000000000002516 106.0
BYD2_k127_7473721_7 RNA-binding protein, YhbY family K07574 - - 0.000000000000000000003628 95.0
BYD2_k127_7515509_0 Tripartite ATP-independent periplasmic transporter, DctM component - - - 3.648e-302 938.0
BYD2_k127_7515509_1 Aminotransferase class I and II K14261 - - 1.47e-219 684.0
BYD2_k127_7515509_2 homoserine dehydrogenase K00003 - 1.1.1.3 7.235e-198 629.0
BYD2_k127_7515509_3 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006569 594.0
BYD2_k127_7515509_4 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002587 504.0
BYD2_k127_7515509_5 Uncharacterized protein conserved in bacteria (DUF2237) K09966 - - 0.0000000000000000000000000000000000000000001083 166.0
BYD2_k127_7515509_6 Cytochrome c K08738 - - 0.000000000000000000000000000004194 123.0
BYD2_k127_7515509_7 Cytochrome c-type protein K02569 - - 0.000000000000000000000000000004233 123.0
BYD2_k127_7515509_8 Cyclic nucleotide-monophosphate binding domain K21563 - - 0.0000000000000000002051 99.0
BYD2_k127_7515509_9 PFAM Cyclic nucleotide-binding K01420,K21563 - - 0.000000000000001895 88.0
BYD2_k127_7567631_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 1.058e-286 886.0
BYD2_k127_7567631_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001998 506.0
BYD2_k127_7567631_10 Protein of unknown function (DUF2909) - - - 0.00000000000306 72.0
BYD2_k127_7567631_11 Protein of unknown function (DUF2970) - - - 0.00007383 51.0
BYD2_k127_7567631_2 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001511 392.0
BYD2_k127_7567631_3 oxidase subunit III K02276 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001912 358.0
BYD2_k127_7567631_4 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005172 283.0
BYD2_k127_7567631_5 oxidase assembly K02258 - - 0.000000000000000000000000000000000000000000000000000000000000000000000102 244.0
BYD2_k127_7567631_6 Involved in biogenesis of respiratory and photosynthetic systems K07152 - - 0.0000000000000000000000000000000000000000000000000000000000002582 218.0
BYD2_k127_7567631_7 signal sequence binding - - - 0.00000000000000000000000000000000000000001192 161.0
BYD2_k127_7567631_8 SURF1-like protein K14998 - - 0.0000000000000000000000000000000000000009381 155.0
BYD2_k127_7567631_9 Integral membrane protein (DUF2244) - - - 0.000000000000000000000000000004233 123.0
BYD2_k127_7579980_0 Acyl-CoA dehydrogenase N terminal K20035 - - 7.481e-244 766.0
BYD2_k127_7579980_1 Electron transfer flavoprotein, alpha subunit K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000264 437.0
BYD2_k127_7579980_2 Electron transfer flavoprotein K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000566 398.0
BYD2_k127_7579980_3 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000002291 244.0
BYD2_k127_7579980_4 CoA binding domain - - - 0.0000000000000000000000000000001798 126.0
BYD2_k127_7608267_0 ABC transporter transmembrane region K02021 - - 1.745e-269 854.0
BYD2_k127_7608267_1 COG1235 Metal-dependent hydrolases of the beta-lactamase superfamily I - - - 0.0000000000000000000000000000000000004446 143.0
BYD2_k127_7608267_2 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000001395 146.0
BYD2_k127_7693751_0 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1197.0
BYD2_k127_7693751_1 DNA helicase K03657 - 3.6.4.12 6.992e-299 931.0
BYD2_k127_7693751_10 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006871 368.0
BYD2_k127_7693751_11 PFAM Methionine biosynthesis MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000009775 256.0
BYD2_k127_7693751_12 DNA polymerase III delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000003948 267.0
BYD2_k127_7693751_13 COG3245 Cytochrome c5 - - - 0.000000000000000000000000000000000000000000000000000000000000000001474 236.0
BYD2_k127_7693751_14 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000002801 225.0
BYD2_k127_7693751_15 FAD binding domain K00481 - 1.14.13.2 0.0000000000000000000000000000000000000000000000000000001852 196.0
BYD2_k127_7693751_16 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.00000000000000000000000000000000000001525 151.0
BYD2_k127_7693751_17 Cupin 2, conserved barrel domain protein - - - 0.0000000000000000000000000000000000002526 148.0
BYD2_k127_7693751_18 PFAM PTS system fructose subfamily IIA component K02821 - 2.7.1.194 0.0000000000000000000000000000000000007956 143.0
BYD2_k127_7693751_19 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000000000000000000000000000000000904 145.0
BYD2_k127_7693751_2 ribonuclease, Rne Rng family K08301 - - 4.283e-227 712.0
BYD2_k127_7693751_20 Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane K03643 - - 0.000000000000000000000000000000000002037 147.0
BYD2_k127_7693751_21 TIGRFAM methionine biosynthesis protein MetW - - - 0.0000000000000000000000000000000006271 147.0
BYD2_k127_7693751_22 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.0000000000000000000000000000002043 129.0
BYD2_k127_7693751_23 Phosphotransferase System K11189 - - 0.0000000000000000000000000000007812 123.0
BYD2_k127_7693751_24 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.00000000000000000000000000001363 119.0
BYD2_k127_7693751_25 Protein of unknown function (DUF2905) - - - 0.000000000000000000000001353 104.0
BYD2_k127_7693751_26 general secretion pathway protein - - - 0.00002618 48.0
BYD2_k127_7693751_3 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 1.106e-211 674.0
BYD2_k127_7693751_4 Belongs to the amidase family K01426 - 3.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000239 610.0
BYD2_k127_7693751_5 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004701 572.0
BYD2_k127_7693751_6 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0018130,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003385 543.0
BYD2_k127_7693751_7 CoA-transferase family III - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002894 507.0
BYD2_k127_7693751_8 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002266 391.0
BYD2_k127_7693751_9 HD domain K07814,K13815 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 380.0
BYD2_k127_7695731_0 Adenylate and Guanylate cyclase catalytic domain - - - 0.0 1059.0
BYD2_k127_7695731_1 methyltransferase - - - 0.000000000000000000000000000000000001479 146.0
BYD2_k127_7695731_2 Phospholipid methyltransferase - - - 0.0000000000000000000000000000006863 127.0
BYD2_k127_7695731_3 Phospholipid methyltransferase - - - 0.000000000001287 76.0
BYD2_k127_776035_0 TRAP dicarboxylate transporter, DctM subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 548.0
BYD2_k127_776035_1 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002099 529.0
BYD2_k127_776035_2 Ketopantoate hydroxymethyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 504.0
BYD2_k127_776035_3 Fatty acid hydroxylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 396.0
BYD2_k127_776035_4 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004408 270.0
BYD2_k127_776035_5 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.0000000000000000000000000000000000000000005432 172.0
BYD2_k127_776035_6 Domain of unknown function (DUF1330) - - - 0.0000000000000000000000000000001141 126.0
BYD2_k127_776035_7 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000002268 119.0
BYD2_k127_7790908_0 Thiamine pyrophosphate enzyme, central domain K01652 - 2.2.1.6 6.739e-220 696.0
BYD2_k127_7790908_1 Aspartate ammonia-lyase K01744 - 4.3.1.1 1.841e-214 674.0
BYD2_k127_7790908_10 Binding-protein-dependent transport system inner membrane component - - - 0.000000000000000000000000000000000000000000000000000000000000000158 228.0
BYD2_k127_7790908_11 cyclic nucleotide binding K01420 - - 0.0000000000000000000000000000000000000000000000000000001155 207.0
BYD2_k127_7790908_12 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000008279 181.0
BYD2_k127_7790908_13 NIPSNAP - - - 0.0000000000000000000000000000000000000000002152 160.0
BYD2_k127_7790908_14 Putative zinc- or iron-chelating domain K06940 - - 0.000000000000000000000000000000000000103 146.0
BYD2_k127_7790908_15 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000001527 128.0
BYD2_k127_7790908_2 Cys/Met metabolism PLP-dependent enzyme K01740 - 2.5.1.49 4.413e-209 656.0
BYD2_k127_7790908_3 ABC transporter K02028,K10004 - 3.6.3.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 391.0
BYD2_k127_7790908_4 Zinc-binding dehydrogenase K12957,K13953,K19961 - 1.1.1.1,1.1.1.258 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 383.0
BYD2_k127_7790908_5 Bacterial periplasmic substrate-binding proteins K02030,K10001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006587 379.0
BYD2_k127_7790908_6 ABC transporter permease K02029,K10003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004139 329.0
BYD2_k127_7790908_7 Carboxylesterase family K01066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 316.0
BYD2_k127_7790908_8 type II secretion system protein E K02454,K02652 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001467 272.0
BYD2_k127_7790908_9 CoA-binding protein K06929 - - 0.0000000000000000000000000000000000000000000000000000000000000000000008956 241.0
BYD2_k127_7799257_0 Belongs to the enoyl-CoA hydratase isomerase family K01692,K01715 - 4.2.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007662 392.0
BYD2_k127_7799257_1 Enoyl-CoA hydratase/isomerase K15866 GO:0003674,GO:0003824,GO:0004300,GO:0005488,GO:0005515,GO:0006082,GO:0006629,GO:0006631,GO:0006635,GO:0006725,GO:0006805,GO:0008150,GO:0008152,GO:0009056,GO:0009062,GO:0009404,GO:0009407,GO:0009410,GO:0009636,GO:0009850,GO:0009852,GO:0009987,GO:0010124,GO:0010817,GO:0016042,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0016853,GO:0019395,GO:0019439,GO:0019748,GO:0019752,GO:0030258,GO:0032787,GO:0034440,GO:0042178,GO:0042221,GO:0042445,GO:0042447,GO:0042537,GO:0042802,GO:0043436,GO:0044237,GO:0044238,GO:0044242,GO:0044248,GO:0044255,GO:0044281,GO:0044282,GO:0046395,GO:0050896,GO:0051716,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071466,GO:0071704,GO:0072329,GO:0098754,GO:1901360,GO:1901361,GO:1901575 5.3.3.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012 331.0
BYD2_k127_7799257_2 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 330.0
BYD2_k127_7799257_3 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000712 315.0
BYD2_k127_7799257_4 AMP-binding enzyme C-terminal domain K01897 - 6.2.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002612 302.0
BYD2_k127_7799257_5 Phenylacetic acid degradation protein PaaY K02617,K08279 GO:0003674,GO:0003824,GO:0016289,GO:0016787,GO:0016788,GO:0016790 - 0.00000000000000000000000000000000000000000000000000000000000000000000000002703 254.0
BYD2_k127_7799257_6 Isochorismatase family - - - 0.0000000000000000000000000000000000000000000000000000000006345 206.0
BYD2_k127_780823_0 Amidohydrolase family - - - 3.022e-257 802.0
BYD2_k127_780823_1 Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily K00121 - 1.1.1.1,1.1.1.284 6.759e-213 664.0
BYD2_k127_780823_2 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 309.0
BYD2_k127_780823_3 PFAM L-carnitine dehydratase bile acid-inducible protein F K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004399 312.0
BYD2_k127_780823_4 COG2513 PEP phosphonomutase and related enzymes K20454 - 4.1.3.32 0.0000000000000000000000000005844 116.0
BYD2_k127_7841027_0 4Fe-4S dicluster domain - - - 1.823e-234 745.0
BYD2_k127_7841027_1 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00123 - 1.17.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003259 540.0
BYD2_k127_7841027_2 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 503.0
BYD2_k127_7841027_3 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003096 380.0
BYD2_k127_7841027_4 COG0477 Permeases of the major facilitator superfamily - - - 0.00000000000000000000000000000000000000000002547 167.0
BYD2_k127_7841027_5 Nitrate reductase delta subunit - - - 0.00000000000000000000000000000000000001266 164.0
BYD2_k127_7841027_6 Protein of unknown function (DUF3305) - - - 0.000000000000000000000000000000000001385 150.0
BYD2_k127_7841027_7 Protein of unknown function (DUF3306) - - - 0.0000000000000001375 89.0
BYD2_k127_7841027_8 - - - - 0.00001448 49.0
BYD2_k127_7843052_0 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1094.0
BYD2_k127_7843052_1 COG1593 TRAP-type C4-dicarboxylate transport system, large permease component - - - 1.124e-198 626.0
BYD2_k127_7843052_10 import inner membrane translocase subunit Tim44 - - - 0.000000000000000000000000000000000000000000000000000002605 200.0
BYD2_k127_7843052_11 - - - - 0.00000000000000000000000000000000000000000000000000027 198.0
BYD2_k127_7843052_12 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000009762 175.0
BYD2_k127_7843052_13 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.000000000000000000000000000000000000000004975 155.0
BYD2_k127_7843052_14 HIT domain - - - 0.00000000000000000000000000000000000000163 162.0
BYD2_k127_7843052_15 protein conserved in bacteria K03690 - - 0.000000000000000000000000000001589 136.0
BYD2_k127_7843052_16 Protein of unknown function (DUF2782) - - - 0.000000000000000000002087 97.0
BYD2_k127_7843052_2 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004719 608.0
BYD2_k127_7843052_3 transport system periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000259 418.0
BYD2_k127_7843052_4 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 385.0
BYD2_k127_7843052_5 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002278 333.0
BYD2_k127_7843052_6 Belongs to the LOG family K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000242 325.0
BYD2_k127_7843052_7 Protein of unknown function (DUF4197) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002119 258.0
BYD2_k127_7843052_8 COG4665 TRAP-type mannitol chloroaromatic compound transport system, small permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000002583 232.0
BYD2_k127_7843052_9 Sodium:solute symporter family - - - 0.000000000000000000000000000000000000000000000000000000000008537 228.0
BYD2_k127_788689_0 TIGRFAM Acetolactate synthase, large subunit, biosynthetic K01652 - 2.2.1.6 3.051e-302 934.0
BYD2_k127_788689_1 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005723 547.0
BYD2_k127_788689_10 RDD family - - - 0.0000000000000000000000000002217 119.0
BYD2_k127_788689_11 Protein of unknown function (DUF3106) - - - 0.000000000000000000007263 102.0
BYD2_k127_788689_12 Protein of unknown function (DUF3619) - - - 0.000000000000000002521 91.0
BYD2_k127_788689_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005252 421.0
BYD2_k127_788689_3 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 375.0
BYD2_k127_788689_4 Permease, YjgP YjgQ family K11720 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 377.0
BYD2_k127_788689_5 Permease YjgP YjgQ family K07091 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007075 315.0
BYD2_k127_788689_6 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000382 309.0
BYD2_k127_788689_7 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001825 304.0
BYD2_k127_788689_8 Acetolactate synthase small K01653 - 2.2.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000099 253.0
BYD2_k127_788689_9 Sigma-70, region 4 K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001232 243.0
BYD2_k127_7914305_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1399.0
BYD2_k127_7914305_1 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 7.643e-205 643.0
BYD2_k127_7914305_10 PFAM N-acetylmuramoyl-L-alanine amidase K03806 - 3.5.1.28 0.0000000000000000000000000000000000000000000000000000000000001649 225.0
BYD2_k127_7914305_11 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.00000000000000000000000000000000000115 149.0
BYD2_k127_7914305_12 Universal stress protein - - - 0.00000000000000000000000000000000001894 140.0
BYD2_k127_7914305_13 Belongs to the bacterial ribosomal protein bL27 family K02899 - - 0.000000000000000000000000000000002061 130.0
BYD2_k127_7914305_14 - - - - 0.0000000001399 70.0
BYD2_k127_7914305_15 - K06950 - - 0.0000000002407 64.0
BYD2_k127_7914305_16 Protein of unknown function (DUF2442) - - - 0.000007713 58.0
BYD2_k127_7914305_2 CoA binding domain K09181 - - 6.762e-198 637.0
BYD2_k127_7914305_3 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003734 536.0
BYD2_k127_7914305_4 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005008 524.0
BYD2_k127_7914305_5 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 427.0
BYD2_k127_7914305_6 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 402.0
BYD2_k127_7914305_7 Signal transduction histidine kinase, subgroup 1, dimerisation phosphoacceptor K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 362.0
BYD2_k127_7914305_8 Rubrerythrin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001045 256.0
BYD2_k127_7914305_9 Protein of unknown function (DUF3501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004353 236.0
BYD2_k127_7919017_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 2.96e-237 765.0
BYD2_k127_7919017_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 2.29e-236 743.0
BYD2_k127_7919017_10 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000381 355.0
BYD2_k127_7919017_11 Peptidase M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006695 335.0
BYD2_k127_7919017_12 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005307 329.0
BYD2_k127_7919017_13 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006831 299.0
BYD2_k127_7919017_14 COG0477 Permeases of the major facilitator superfamily K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002338 258.0
BYD2_k127_7919017_15 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000006306 224.0
BYD2_k127_7919017_16 Belongs to the TrpF family K01817 - 5.3.1.24 0.00000000000000000000000000000000000000000000000000000003721 212.0
BYD2_k127_7919017_17 PFAM Colicin V production protein K03558 - - 0.000000000000000000000000000000005893 138.0
BYD2_k127_7919017_18 PFAM Sporulation domain protein K03749 - - 0.000000000000006162 81.0
BYD2_k127_7919017_2 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 7.406e-235 736.0
BYD2_k127_7919017_3 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 GO:0000162,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0042802,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20 2.819e-213 672.0
BYD2_k127_7919017_4 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 550.0
BYD2_k127_7919017_5 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003992 561.0
BYD2_k127_7919017_6 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 - 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001719 475.0
BYD2_k127_7919017_7 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004837 474.0
BYD2_k127_7919017_8 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006012 447.0
BYD2_k127_7919017_9 LysM domain K08086 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 422.0
BYD2_k127_7944695_0 Protein of unknown function (DUF1343) - - - 2.416e-212 666.0
BYD2_k127_7944695_1 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 475.0
BYD2_k127_7944695_2 Tripartite tricarboxylate transporter family receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001113 409.0
BYD2_k127_7944695_3 Haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 302.0
BYD2_k127_7944695_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001272 253.0
BYD2_k127_7944695_5 Male sterility protein K22025 - 1.1.1.410 0.0000000000000000000000000000000000000000000000000000000000000000002601 254.0
BYD2_k127_7944695_6 - - - - 0.00000000000000000000000000000000000007214 150.0
BYD2_k127_7966924_0 ABC transporter - - - 2.028e-233 733.0
BYD2_k127_7966924_1 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001211 611.0
BYD2_k127_7966924_10 Thioesterase-like superfamily - - - 0.000000000000000000104 94.0
BYD2_k127_7966924_2 Serine aminopeptidase, S33 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002272 525.0
BYD2_k127_7966924_3 Patatin phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003373 443.0
BYD2_k127_7966924_4 Nitroreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002451 353.0
BYD2_k127_7966924_5 Inner membrane protein CreD K06143 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002765 325.0
BYD2_k127_7966924_6 PFAM peptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000549 309.0
BYD2_k127_7966924_7 Subtilase family K12685 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004889 292.0
BYD2_k127_7966924_8 TIGRFAM SagB-type dehydrogenase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000004284 256.0
BYD2_k127_7966924_9 Protein of unknown function (DUF3014) - - - 0.0000000000000000000000000000000000000000000000000000000003205 214.0
BYD2_k127_8028324_0 enoyl-CoA hydratase K15513 - 4.1.2.44 5.202e-226 718.0
BYD2_k127_8028324_1 benzoyl-CoA oxygenase K15512 - 1.14.13.208 9.675e-202 632.0
BYD2_k127_8028324_2 AsmA family K07289,K07290 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001858 596.0
BYD2_k127_8028324_3 Shikimate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000008876 242.0
BYD2_k127_8028324_4 ABC transporter substrate binding protein K01989 - - 0.0000000000000000000000000000000000000000000000000000000004175 218.0
BYD2_k127_8028324_5 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes - - - 0.000000000000000000000000000000000000000000000000000000003736 216.0
BYD2_k127_8028324_6 Flavodoxin - - - 0.00000000000000000000000000000000000000000000000001737 184.0
BYD2_k127_8028324_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000008137 171.0
BYD2_k127_8096208_0 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1008.0
BYD2_k127_8096208_1 Type I phosphodiesterase / nucleotide pyrophosphatase - - - 1.263e-226 710.0
BYD2_k127_8096208_10 LysE type translocator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006479 282.0
BYD2_k127_8096208_11 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005417 271.0
BYD2_k127_8096208_12 UbiA prenyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002379 276.0
BYD2_k127_8096208_13 Histidine phosphatase superfamily (branch 1) - - - 0.00000000000000000000000000000000000000000000000000002412 194.0
BYD2_k127_8096208_14 cytochrome - - - 0.0000000000000000000000000000000000000000000005616 173.0
BYD2_k127_8096208_15 heat shock protein K04762 - - 0.00000000000000000000000004997 115.0
BYD2_k127_8096208_16 Protein required for attachment to host cells - - - 0.0000000000000000000000002145 113.0
BYD2_k127_8096208_17 LuxR family transcriptional regulator - - - 0.0000000000000001033 88.0
BYD2_k127_8096208_18 Transmembrane family 220, helix - - - 0.0000000000162 69.0
BYD2_k127_8096208_19 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000003739 59.0
BYD2_k127_8096208_2 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009559 593.0
BYD2_k127_8096208_3 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006962 573.0
BYD2_k127_8096208_4 TatD related DNase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003181 516.0
BYD2_k127_8096208_5 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K19969 - 4.2.3.152,4.2.3.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002564 480.0
BYD2_k127_8096208_6 Xylose isomerase domain protein TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006772 422.0
BYD2_k127_8096208_7 Peptide methionine sulfoxide reductase K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 327.0
BYD2_k127_8096208_8 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003608 318.0
BYD2_k127_8096208_9 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 322.0
BYD2_k127_8106857_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1615.0
BYD2_k127_8106857_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 3.745e-243 761.0
BYD2_k127_8106857_2 FAD binding domain K20940 - 1.14.13.218 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004093 536.0
BYD2_k127_8106857_3 phosphoserine phosphatase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000001361 288.0
BYD2_k127_8106857_4 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000002595 228.0
BYD2_k127_8106857_5 - - - - 0.000000000000000000000000000000000000000000000005028 181.0
BYD2_k127_8106857_6 Endoribonuclease L-PSP - - - 0.00000000000000000000000000000005055 139.0
BYD2_k127_8106857_7 Protein involved in outer membrane biogenesis - - - 0.00000000000000000000000000000007087 139.0
BYD2_k127_8115240_0 TIGRFAM transporter, hydrophobe amphiphile efflux-1 (HAE1) family K18902 - - 0.0 1290.0
BYD2_k127_8115240_1 Outer membrane efflux protein K18903 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008064 474.0
BYD2_k127_8115240_2 L-2-amino-thiazoline-4-carboxylic acid hydrolase - - - 0.000000000000000000000000000000000000000000000000003043 186.0
BYD2_k127_8115240_3 RND efflux system, outer membrane lipoprotein K18903 - - 0.00000000000006935 84.0
BYD2_k127_8150046_0 Histidine kinase A domain protein - - - 0.0 1168.0
BYD2_k127_8150046_1 His Kinase A (phosphoacceptor) domain - - - 0.0 1167.0
BYD2_k127_8150046_10 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.000000000000000000000000000000000000005845 149.0
BYD2_k127_8150046_11 Domain of unknown function (DUF4212) K14393 - - 0.000000000000000000000000000003336 123.0
BYD2_k127_8150046_12 - - - - 0.0000000000000002646 80.0
BYD2_k127_8150046_2 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14393 - - 9.704e-319 983.0
BYD2_k127_8150046_3 Exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 582.0
BYD2_k127_8150046_4 signal-transduction protein containing cAMP-binding and CBS domains K07182 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009539 397.0
BYD2_k127_8150046_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000000001383 234.0
BYD2_k127_8150046_6 LuxR family transcriptional regulator K13041 - - 0.00000000000000000000000000000000000000000000000000003083 205.0
BYD2_k127_8150046_7 - - - - 0.00000000000000000000000000000000000000000000000002218 182.0
BYD2_k127_8150046_8 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000006161 160.0
BYD2_k127_8150046_9 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000001505 154.0
BYD2_k127_8163226_0 benzoyl-CoA oxygenase K15512 - 1.14.13.208 9.323e-247 770.0
BYD2_k127_8163226_1 AMP-binding enzyme K12508 - 6.2.1.34 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007097 406.0
BYD2_k127_8163226_2 mechanosensitive ion channel K03442 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005762 319.0
BYD2_k127_8163226_3 enoyl-coa hydratase carnithine racemase K15513 - 4.1.2.44 0.0000000000000000000000001877 105.0
BYD2_k127_8163226_4 2-Nitropropane dioxygenase - - - 0.000000000000000003572 90.0
BYD2_k127_8166979_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 430.0
BYD2_k127_8166979_1 TIGRFAM Serine O-acetyltransferase K00640 - 2.3.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 299.0
BYD2_k127_8166979_2 Rrf2 family transcriptional regulator, iron-sulfur cluster assembly K13643 - - 0.00000000000000000000000000000000000000000000000000000000000000001492 226.0
BYD2_k127_8166979_3 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.000000000000000000000000000000177 128.0
BYD2_k127_8191717_0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain K07516 - 1.1.1.35 5.14e-255 805.0
BYD2_k127_8191717_1 PFAM AMP-dependent synthetase and ligase K20034 - 6.2.1.44 1.255e-246 771.0
BYD2_k127_8191717_10 FCD - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004036 315.0
BYD2_k127_8191717_11 Enoyl-CoA hydratase/isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002633 250.0
BYD2_k127_8191717_12 diguanylate cyclase K21019 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000009025 220.0
BYD2_k127_8191717_13 PFAM MaoC domain protein dehydratase - - - 0.0000000000000000000000000000000000000000000000001917 181.0
BYD2_k127_8191717_14 GMC oxidoreductase K00108 - 1.1.99.1 0.0000000000000000000000000003156 121.0
BYD2_k127_8191717_2 Periplasmic binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 586.0
BYD2_k127_8191717_3 Belongs to the thiolase family K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001501 544.0
BYD2_k127_8191717_4 Putative cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004633 477.0
BYD2_k127_8191717_5 Branched-chain amino acid transport system / permease component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 420.0
BYD2_k127_8191717_6 Branched-chain amino acid transport system / permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002047 399.0
BYD2_k127_8191717_7 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005699 364.0
BYD2_k127_8191717_8 Branched-chain amino acid ATP-binding cassette transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006364 351.0
BYD2_k127_8191717_9 ATPases associated with a variety of cellular activities - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008261 330.0
BYD2_k127_8202163_0 NADH Ubiquinone plastoquinone (Complex I) K12141 - - 2.197e-243 770.0
BYD2_k127_8202163_1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 6.818e-197 638.0
BYD2_k127_8202163_2 hydrogenase 4 membrane K12140 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 304.0
BYD2_k127_8202163_3 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000491 258.0
BYD2_k127_8202163_4 Cro/C1-type HTH DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000004911 192.0
BYD2_k127_8202163_5 Acylphosphatase K01512 - 3.6.1.7 0.000000000000000000000433 98.0
BYD2_k127_8202163_6 D-arabinono-1,4-lactone oxidase - - - 0.00000000002502 71.0
BYD2_k127_8203828_0 Transcriptional regulatory protein, C terminal - - - 4.316e-282 880.0
BYD2_k127_8203828_1 RecA-superfamily ATPases implicated in signal transduction K08482 - - 1.104e-206 653.0
BYD2_k127_8203828_10 Cupin domain - - - 0.0000000000000000000000000000000000000000000000001336 179.0
BYD2_k127_8203828_11 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000001346 178.0
BYD2_k127_8203828_12 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000001151 151.0
BYD2_k127_8203828_13 Ring hydroxylating beta subunit K16320 - 1.14.12.1 0.000000000000000000000000000000000000229 149.0
BYD2_k127_8203828_14 O-methyltransferase - - - 0.000000000000000000000000000004868 126.0
BYD2_k127_8203828_15 Acetyltransferase (GNAT) domain - - - 0.00000000000000000004069 102.0
BYD2_k127_8203828_16 Antibiotic biosynthesis monooxygenase - - - 0.00000000000000001726 86.0
BYD2_k127_8203828_2 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001491 507.0
BYD2_k127_8203828_3 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases large terminal subunit K16319,K18074 - 1.14.12.1,1.14.12.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001377 483.0
BYD2_k127_8203828_4 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007803 433.0
BYD2_k127_8203828_5 two-component system sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002122 447.0
BYD2_k127_8203828_6 alpha/beta hydrolase fold - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006753 370.0
BYD2_k127_8203828_7 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009732 338.0
BYD2_k127_8203828_8 Pyridoxal phosphate biosynthetic protein PdxA K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 305.0
BYD2_k127_8203828_9 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003359 267.0
BYD2_k127_8233637_0 DNA polymerase alpha chain like domain K02337 GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0031668,GO:0033554,GO:0050896,GO:0051716,GO:0071496 2.7.7.7 3.362e-235 759.0
BYD2_k127_8233637_1 Helix-turn-helix domain protein - - - 0.00000000000000000000000000000000000000000000000000001434 197.0
BYD2_k127_8233637_2 FAD binding domain - - - 0.00000000000000000299 96.0
BYD2_k127_8233637_3 Acylphosphatase K01512 - 3.6.1.7 0.0000000000003104 71.0
BYD2_k127_8234619_0 Carbamoyl-phosphate synthetase ammonia chain K01955 - 6.3.5.5 0.0 1354.0
BYD2_k127_8234619_1 Carbamoyltransferase K00612 - - 4.433e-301 933.0
BYD2_k127_8234619_10 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007623 276.0
BYD2_k127_8234619_11 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.00000000000000000000000000000000000000000000000000000000000000000003262 261.0
BYD2_k127_8234619_12 Glycosyl transferases group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000003559 256.0
BYD2_k127_8234619_13 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000001343 236.0
BYD2_k127_8234619_14 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000003033 234.0
BYD2_k127_8234619_15 Glycosyl transferase group 1 - - - 0.00000000000000000000000000000000000000000000000000000000000001382 245.0
BYD2_k127_8234619_16 polysaccharide biosynthetic process - - - 0.0000000000000000000000000000000000000000000000000000000000003693 243.0
BYD2_k127_8234619_17 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000004616 216.0
BYD2_k127_8234619_18 O-Antigen ligase - - - 0.00000000000000000000000000000000000000000000000004259 198.0
BYD2_k127_8234619_19 AAA domain K08252,K16692 - 2.7.10.1 0.0000000000000000000000000000000000008977 143.0
BYD2_k127_8234619_2 Heparinase II/III N-terminus - - - 2.779e-205 665.0
BYD2_k127_8234619_20 - - - - 0.0000000000000000000000000000000002291 138.0
BYD2_k127_8234619_21 lipolytic protein G-D-S-L family - - - 0.000000000000000000000006505 115.0
BYD2_k127_8234619_22 - - - - 0.0000000000001558 78.0
BYD2_k127_8234619_23 CheR methyltransferase, SAM binding domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.0001278 45.0
BYD2_k127_8234619_3 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.761e-195 618.0
BYD2_k127_8234619_4 UDP binding domain K02474 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 606.0
BYD2_k127_8234619_5 transferase activity, transferring glycosyl groups K01953 - 6.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006908 586.0
BYD2_k127_8234619_6 Polysaccharide biosynthesis protein K02473,K08679 - 5.1.3.6,5.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007004 443.0
BYD2_k127_8234619_7 - Amino acid transport and metabolism K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006246 419.0
BYD2_k127_8234619_8 Belongs to the CarA family K01956 - 6.3.5.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004816 411.0
BYD2_k127_8234619_9 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000006725 300.0
BYD2_k127_8256864_0 FAD dependent oxidoreductase - - - 2.412e-209 659.0
BYD2_k127_8256864_1 TonB dependent receptor K02014,K16089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007289 576.0
BYD2_k127_8256864_10 Flavin reductase like domain - - - 0.0000000000000000000000000000000001129 139.0
BYD2_k127_8256864_11 Chromate transporter K07240 - - 0.00000000000000000000000000000001458 145.0
BYD2_k127_8256864_12 - - - - 0.0000000000000000000000000000007053 128.0
BYD2_k127_8256864_13 - - - - 0.0000000000002729 74.0
BYD2_k127_8256864_14 Major Facilitator Superfamily - - - 0.00000000002516 77.0
BYD2_k127_8256864_15 Antibiotic biosynthesis monooxygenase - - - 0.000000001596 60.0
BYD2_k127_8256864_2 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000348 530.0
BYD2_k127_8256864_3 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003993 436.0
BYD2_k127_8256864_4 Amidohydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003209 366.0
BYD2_k127_8256864_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 366.0
BYD2_k127_8256864_6 Polysaccharide pyruvyl transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002771 290.0
BYD2_k127_8256864_7 - - - - 0.00000000000000000000000000000000000000000000000000001372 198.0
BYD2_k127_8256864_8 Chromate transporter K07240 - - 0.000000000000000000000000000000000000000007434 170.0
BYD2_k127_8256864_9 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000009091 143.0
BYD2_k127_8270221_0 AcrB/AcrD/AcrF family K03296,K18138 - - 0.0 1419.0
BYD2_k127_8270221_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007222 361.0
BYD2_k127_8270221_2 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007853 321.0
BYD2_k127_8270221_3 MOSC N-terminal beta barrel domain K07140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000067 255.0
BYD2_k127_8270221_4 - - - - 0.0000000000000000000000000000000000000000000000000000000005861 212.0
BYD2_k127_8270221_5 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000007322 135.0
BYD2_k127_8300164_0 type I secretion outer membrane protein, TolC K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002779 421.0
BYD2_k127_8300164_1 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001489 381.0
BYD2_k127_8300164_2 Glycosyl transferase family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002739 333.0
BYD2_k127_8300164_3 Glycosyltransferase family 9 (heptosyltransferase) K02841 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005758 314.0
BYD2_k127_8300164_4 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006685 297.0
BYD2_k127_8300164_5 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008161 268.0
BYD2_k127_8300164_6 epimerase dehydratase K02473,K08679 - 5.1.3.6,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000004508 205.0
BYD2_k127_8431727_0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 4.185e-228 717.0
BYD2_k127_8431727_1 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008531 572.0
BYD2_k127_8431727_2 Rhomboid family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 376.0
BYD2_k127_8431727_3 Serine aminopeptidase, S33 K06889,K07397 - - 0.000000000000009809 74.0
BYD2_k127_8436697_0 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 6.645e-263 837.0
BYD2_k127_8436697_1 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K01104 - 3.1.3.48 0.000000000000000000000000000000000000000000000000003062 185.0
BYD2_k127_8436697_2 Belongs to the 'phage' integrase family - - - 0.000000000000000001826 96.0
BYD2_k127_8446426_0 2-Nitropropane dioxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004706 459.0
BYD2_k127_8446426_1 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001917 309.0
BYD2_k127_8446426_2 Crp-like helix-turn-helix domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001523 261.0
BYD2_k127_8446426_3 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000003348 218.0
BYD2_k127_8446426_4 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000188 212.0
BYD2_k127_8446426_5 PFAM Cupin 2, conserved barrel - - - 0.00000000000000000000000000000000004971 138.0
BYD2_k127_8446426_6 - - - - 0.0000000000000006461 83.0
BYD2_k127_8449102_0 CoA binding domain K09181 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 604.0
BYD2_k127_8449102_1 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 579.0
BYD2_k127_8449102_2 PFAM MmgE PrpD family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 520.0
BYD2_k127_8449102_3 acyl-CoA transferases carnitine dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006099 426.0
BYD2_k127_8449102_4 class II Aldolase - - - 0.0000000000000000000000000000000000000000000000001833 179.0
BYD2_k127_8456180_0 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 0.0 1304.0
BYD2_k127_8456180_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000436 598.0
BYD2_k127_8456180_10 histidine kinase HAMP region domain protein K07649 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001163 347.0
BYD2_k127_8456180_11 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 302.0
BYD2_k127_8456180_12 Probable molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005355 290.0
BYD2_k127_8456180_13 Transcriptional regulatory protein, C terminal K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009122 267.0
BYD2_k127_8456180_14 EamA-like transporter family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006628 264.0
BYD2_k127_8456180_15 Ferritin-like domain K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000005425 240.0
BYD2_k127_8456180_16 2Fe-2S -binding domain protein K03518 - 1.2.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000008566 240.0
BYD2_k127_8456180_17 Pfam:UPF0118 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002731 241.0
BYD2_k127_8456180_18 Arginase family - - - 0.000000000000000000000000000000000000000000000000000000000000008642 226.0
BYD2_k127_8456180_19 TIGRFAM riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000008858 221.0
BYD2_k127_8456180_2 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003526 611.0
BYD2_k127_8456180_20 Belongs to the thioredoxin family K03671 - - 0.00000000000000000000000000000000000000000000000000003413 189.0
BYD2_k127_8456180_21 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.00000000000000000000000000000000000000000000000000008931 196.0
BYD2_k127_8456180_22 Phasin protein - - - 0.0000000000000000000000000000000000000000000000000002616 193.0
BYD2_k127_8456180_23 Molybdopterin-guanine dinucleotide biosynthesis protein MobA K07141 - 2.7.7.76 0.000000000000000000000000000000000000000000000004345 183.0
BYD2_k127_8456180_24 Etoposide-induced protein 2.4 (EI24) - - - 0.00000000000000000000000000000000000000000001249 173.0
BYD2_k127_8456180_25 Protein of unknown function (DUF1272) K09984 - - 0.0000000000000000000000000000000000007694 140.0
BYD2_k127_8456180_26 SPW repeat - - - 0.0000000000005119 81.0
BYD2_k127_8456180_3 Aldehyde oxidase and xanthine dehydrogenase K03520 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001981 462.0
BYD2_k127_8456180_4 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 436.0
BYD2_k127_8456180_5 XdhC and CoxI family K07402 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 415.0
BYD2_k127_8456180_6 Cytochrome P450 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006308 415.0
BYD2_k127_8456180_7 Phosphoenolpyruvate phosphomutase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002874 396.0
BYD2_k127_8456180_8 Glutaredoxin-family domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001096 391.0
BYD2_k127_8456180_9 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002968 351.0
BYD2_k127_8472233_0 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 6.434e-215 678.0
BYD2_k127_8472233_1 Hydantoinase B/oxoprolinase K01474 - 3.5.2.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007802 501.0
BYD2_k127_8472233_2 Hydantoinase/oxoprolinase K01473 - 3.5.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 329.0
BYD2_k127_8472233_3 COG0457 FOG TPR repeat - - - 0.000000000000000000000000000000000006985 139.0
BYD2_k127_8477870_0 response regulator K07715 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002283 511.0
BYD2_k127_8477870_1 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 347.0
BYD2_k127_8477870_2 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000004451 181.0
BYD2_k127_8477870_3 Belongs to the Orn Lys Arg decarboxylase class-II family K01581 - 4.1.1.17 0.000000000005682 65.0
BYD2_k127_8488753_0 extracellular solute-binding protein - - - 8.134e-285 890.0
BYD2_k127_8488753_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 513.0
BYD2_k127_8488753_2 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002579 511.0
BYD2_k127_8488753_3 Enoyl- acyl-carrier-protein reductase NADH K00208 - 1.3.1.10,1.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009529 372.0
BYD2_k127_8488753_4 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.00000000000000000000000000000000000000000000000000000000000579 218.0
BYD2_k127_8488753_5 PAS domain K00575,K13924 - 2.1.1.80,3.1.1.61 0.00000005062 56.0
BYD2_k127_8498138_0 Binding-protein-dependent transport system inner membrane component K02033,K15585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 392.0
BYD2_k127_8498138_1 Binding-protein-dependent transport system inner membrane component K02034 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001534 387.0
BYD2_k127_8498138_2 Bacterial extracellular solute-binding proteins, family 5 Middle K02035 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002236 362.0
BYD2_k127_8501518_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 2.912e-297 930.0
BYD2_k127_8501518_1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K03520 - 1.2.5.3 8.09e-239 764.0
BYD2_k127_8501518_2 DNA replication, recombination, and repair K07478 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 601.0
BYD2_k127_8501518_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 534.0
BYD2_k127_8501518_4 Transcriptional regulator crp fnr family K10914 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000272 250.0
BYD2_k127_8501518_5 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000000000000000000000000002897 228.0
BYD2_k127_8501518_6 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0006797 48.0
BYD2_k127_8521566_0 AMP-binding enzyme C-terminal domain K01895 - 6.2.1.1 9.937e-260 810.0
BYD2_k127_8521566_1 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00161 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009357 482.0
BYD2_k127_8521566_2 Transketolase, pyrimidine binding domain K00162 - 1.2.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007024 290.0
BYD2_k127_8521566_3 Nicotinate phosphoribosyltransferase (NAPRTase) family - - - 0.000000000000000000000000000000000005823 139.0
BYD2_k127_8521566_4 CoA binding domain K09181 - - 0.0000000000000000000000000000000083 136.0
BYD2_k127_8539698_0 NADH-quinone oxidoreductase K00336 - 1.6.5.3 5.245e-269 867.0
BYD2_k127_8539698_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 2.419e-233 743.0
BYD2_k127_8539698_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 5.368e-225 713.0
BYD2_k127_8539698_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005312 310.0
BYD2_k127_8539698_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001735 280.0
BYD2_k127_8539698_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000893 250.0
BYD2_k127_8539698_6 Thioredoxin-like [2Fe-2S] ferredoxin K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000003441 236.0
BYD2_k127_8575190_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.787e-280 870.0
BYD2_k127_8575190_1 Oxidoreductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 614.0
BYD2_k127_8575190_10 Flavodoxin-like fold K19784 - - 0.000000000000000000000000000000000000000000000000000001403 199.0
BYD2_k127_8575190_11 Carboxymuconolactone decarboxylase family K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000000000005983 178.0
BYD2_k127_8575190_12 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000214 173.0
BYD2_k127_8575190_13 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.00000000000000000000000009847 123.0
BYD2_k127_8575190_14 Bacterial protein of unknown function (DUF883) - - - 0.000001297 52.0
BYD2_k127_8575190_15 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00005763 55.0
BYD2_k127_8575190_2 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 - 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003068 563.0
BYD2_k127_8575190_3 DAHP synthetase I family K01627 - 2.5.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 460.0
BYD2_k127_8575190_4 Phytanoyl-CoA dioxygenase (PhyH) K10674 - 1.14.11.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 442.0
BYD2_k127_8575190_5 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005928 389.0
BYD2_k127_8575190_6 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 324.0
BYD2_k127_8575190_7 HpcH/HpaI aldolase/citrate lyase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003203 269.0
BYD2_k127_8575190_8 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000001633 254.0
BYD2_k127_8575190_9 Class II Aldolase and Adducin N-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004417 253.0
BYD2_k127_8647638_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 1.175e-274 856.0
BYD2_k127_8647638_1 O-methyltransferase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000199 608.0
BYD2_k127_8647638_2 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008562 598.0
BYD2_k127_8647638_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001435 424.0
BYD2_k127_8647638_4 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005884 404.0
BYD2_k127_8647638_5 Uracil DNA glycosylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003681 278.0
BYD2_k127_8647638_6 Glutathione S-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000001817 217.0
BYD2_k127_8647638_7 preprotein translocase subunit YajC K03210 - - 0.00000000000000000000000000000000000000006665 153.0
BYD2_k127_8693849_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001556 550.0
BYD2_k127_8693849_1 Amidohydrolase K01686 - 4.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003762 491.0
BYD2_k127_8693849_10 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002919 280.0
BYD2_k127_8693849_11 COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component - - - 0.000000000000000000000000000000000000000000000000000000000000009665 229.0
BYD2_k127_8693849_12 PFAM DoxX family protein K15977 - - 0.0000000000000000000000000000000000000000000000001318 183.0
BYD2_k127_8693849_13 CBS domain - - - 0.000000000000000000000000000000000000000000003744 168.0
BYD2_k127_8693849_14 glutathione s-transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000005604 167.0
BYD2_k127_8693849_15 prohibitin homologues K04087 - - 0.000000000000000000000000000000000000001653 150.0
BYD2_k127_8693849_16 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000006225 146.0
BYD2_k127_8693849_17 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000003911 138.0
BYD2_k127_8693849_18 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000248 87.0
BYD2_k127_8693849_2 HflC and HflK could encode or regulate a protease K04088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001013 481.0
BYD2_k127_8693849_3 Divalent cation transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003356 452.0
BYD2_k127_8693849_4 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 441.0
BYD2_k127_8693849_5 COG3119 Arylsulfatase A and related enzymes - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001898 421.0
BYD2_k127_8693849_6 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009502 308.0
BYD2_k127_8693849_7 Phospholipase A1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003146 297.0
BYD2_k127_8693849_8 dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006136 292.0
BYD2_k127_8693849_9 PFAM Adenylate and Guanylate cyclase catalytic domain K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005498 298.0
BYD2_k127_8744663_0 2-aminobenzoate-CoA ligase K08295 - 6.2.1.32 3.119e-224 710.0
BYD2_k127_8744663_1 PFAM acyl-CoA dehydrogenase domain protein K00249 - 1.3.8.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003753 442.0
BYD2_k127_8744663_2 PFAM regulatory protein, MarR - - - 0.0000000000000000000000000000000000000000000000006324 180.0
BYD2_k127_8744663_3 Endoribonuclease L-PSP - - - 0.00000000000000008231 87.0
BYD2_k127_8744663_4 protein conserved in bacteria K09790 - - 0.0001847 45.0
BYD2_k127_8777087_0 ABC-2 family transporter protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000772 506.0
BYD2_k127_8777087_1 AAA domain, putative AbiEii toxin, Type IV TA system K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 404.0
BYD2_k127_8777087_2 Branched-chain amino acid transport system / permease component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004501 379.0
BYD2_k127_8777087_3 ATPases associated with a variety of cellular activities K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002848 322.0
BYD2_k127_8777087_4 Secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002164 308.0
BYD2_k127_8777087_5 Branched-chain amino acid ATP-binding cassette transporter K01995 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000664 300.0
BYD2_k127_8777087_6 Branched-chain amino acid transport system / permease component K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008034 283.0
BYD2_k127_8777087_7 asparaginase K01424,K13051 - 3.4.19.5,3.5.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001599 301.0
BYD2_k127_8777087_8 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000001705 126.0
BYD2_k127_8795968_0 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454,K02652 - - 3.022e-244 766.0
BYD2_k127_8795968_1 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 6.036e-199 638.0
BYD2_k127_8795968_10 general secretion pathway protein - - - 0.00000000000000000000006007 115.0
BYD2_k127_8795968_11 - - - - 0.00000000000000000004488 100.0
BYD2_k127_8795968_2 type II secretion system protein K02653 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003842 499.0
BYD2_k127_8795968_3 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002808 438.0
BYD2_k127_8795968_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000001795 242.0
BYD2_k127_8795968_5 - - - - 0.00000000000000000000000000000000000000000000000000000000000001946 234.0
BYD2_k127_8795968_6 Prokaryotic N-terminal methylation motif - - - 0.0000000000000000000000000000000000000000000000000000007097 199.0
BYD2_k127_8795968_8 Tetratricopeptide repeats - - - 0.000000000000000000000000000000000000000002031 166.0
BYD2_k127_8795968_9 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000001032 160.0
BYD2_k127_8800839_0 Belongs to the aldehyde dehydrogenase family - - - 2.26e-226 719.0
BYD2_k127_8800839_1 Single-stranded-DNA-specific exonuclease RecJ K07462 - - 6.043e-213 677.0
BYD2_k127_8800839_10 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000003577 211.0
BYD2_k127_8800839_11 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000005549 192.0
BYD2_k127_8800839_12 Glyoxalase-like domain K01759 - 4.4.1.5 0.00000000000000000000000000000000000000000009991 166.0
BYD2_k127_8800839_13 Cyclophilin-like K09143 - - 0.0000000000000000000000000000001389 139.0
BYD2_k127_8800839_14 Pyridoxamine 5'-phosphate oxidase K07226 - - 0.00000000000000000000000001179 115.0
BYD2_k127_8800839_15 KTSC domain - - - 0.00000004472 63.0
BYD2_k127_8800839_2 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003692 552.0
BYD2_k127_8800839_3 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002427 514.0
BYD2_k127_8800839_4 tRNA synthetases class II (D, K and N) K04567 - 6.1.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003773 407.0
BYD2_k127_8800839_5 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007421 411.0
BYD2_k127_8800839_6 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003659 295.0
BYD2_k127_8800839_7 Belongs to the GST superfamily K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002309 282.0
BYD2_k127_8800839_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001262 257.0
BYD2_k127_8800839_9 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000001717 246.0
BYD2_k127_8825433_0 Adenylate cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 326.0
BYD2_k127_8825433_1 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000243 181.0
BYD2_k127_8825433_2 helix_turn_helix, Lux Regulon - - - 0.00000000000000000189 89.0
BYD2_k127_8841363_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 2.212e-231 739.0
BYD2_k127_8841363_1 COG4664 TRAP-type mannitol chloroaromatic compound transport system, large permease component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003269 610.0
BYD2_k127_8841363_10 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.000000000000000000000000000000000000000000000000000000000000000000000000000009073 273.0
BYD2_k127_8841363_11 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000001733 258.0
BYD2_k127_8841363_12 Tripartite ATP-independent periplasmic transporters, DctQ component - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000015 252.0
BYD2_k127_8841363_13 Transcriptional regulator crp fnr family K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001958 250.0
BYD2_k127_8841363_14 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.0000000000000000000000000000000000000000000000000000000000000004212 224.0
BYD2_k127_8841363_15 Nitrogen regulatory protein P-II K04751,K04752 - - 0.000000000000000000000000000000000000000000000000000000005886 202.0
BYD2_k127_8841363_16 periplasmic or secreted lipoprotein - - - 0.0000000000000000000000000000000000000000000001915 183.0
BYD2_k127_8841363_17 Protein of unknown function (DUF3025) - - - 0.00000000000000000000000000000000000000000004961 173.0
BYD2_k127_8841363_18 Smr domain - - - 0.000000000000000000000000000000000000000006115 172.0
BYD2_k127_8841363_19 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000007354 145.0
BYD2_k127_8841363_2 Amidase K02433 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009384 544.0
BYD2_k127_8841363_20 - - - - 0.0000000000000000000000004429 114.0
BYD2_k127_8841363_21 Diguanylate cyclase - - - 0.00000004137 61.0
BYD2_k127_8841363_3 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001959 505.0
BYD2_k127_8841363_4 DEAD DEAH box helicase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000991 501.0
BYD2_k127_8841363_5 Pyridine nucleotide-disulphide oxidoreductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009844 484.0
BYD2_k127_8841363_6 Part of the tripartite ATP-independent periplasmic (TRAP) transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000271 477.0
BYD2_k127_8841363_7 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 424.0
BYD2_k127_8841363_8 PFAM Short-chain dehydrogenase reductase SDR K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001957 329.0
BYD2_k127_8841363_9 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001316 288.0
BYD2_k127_8916434_0 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 3.248e-214 700.0
BYD2_k127_8916434_1 Secretin and TonB N terminus short domain K02453 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 575.0
BYD2_k127_8916434_2 PFAM type II secretion system K02455,K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006082 422.0
BYD2_k127_8916434_3 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000003729 199.0
BYD2_k127_8916434_4 Prokaryotic N-terminal methylation motif K02456 - - 0.00000000000000000000000000000000000000000000005269 194.0
BYD2_k127_8916434_5 prepilin-type N-terminal cleavage methylation K02456 - - 0.0000000000000000000000000000000000000001043 165.0
BYD2_k127_8916434_6 - - - - 0.00000000000000000000000693 109.0
BYD2_k127_8916434_7 - - - - 0.0000000000000005439 84.0
BYD2_k127_8916434_8 Type II secretion system (T2SS), protein M subtype b - - - 0.000000000000009052 85.0
BYD2_k127_9032619_0 PFAM glycoside hydrolase 15-related - - - 1.405e-253 798.0
BYD2_k127_9032619_1 Phospholipase D Active site motif K01115 - 3.1.4.4 1.049e-249 790.0
BYD2_k127_9032619_10 chromosome segregation K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009408 379.0
BYD2_k127_9032619_11 Lipocalin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004133 378.0
BYD2_k127_9032619_12 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 333.0
BYD2_k127_9032619_13 Thioredoxin-like K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005931 332.0
BYD2_k127_9032619_14 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004178 330.0
BYD2_k127_9032619_15 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 317.0
BYD2_k127_9032619_16 LemA family K03744 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 296.0
BYD2_k127_9032619_17 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005624 310.0
BYD2_k127_9032619_18 Class II Aldolase and Adducin N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000296 285.0
BYD2_k127_9032619_19 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005591 280.0
BYD2_k127_9032619_2 ABC transporter K06020 - 3.6.3.25 2.064e-248 774.0
BYD2_k127_9032619_20 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001166 281.0
BYD2_k127_9032619_21 TPM domain K06872 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001358 264.0
BYD2_k127_9032619_22 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008444 265.0
BYD2_k127_9032619_23 PFAM Taurine catabolism dioxygenase TauD, TfdA family K06912 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001377 257.0
BYD2_k127_9032619_24 membrane - - - 0.000000000000000000000000000000000000000000000000000000000000734 226.0
BYD2_k127_9032619_25 intermembrane lipid transfer K06192 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006869,GO:0008150,GO:0009987,GO:0010876,GO:0016020,GO:0016021,GO:0016043,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0033036,GO:0042597,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0061024,GO:0071702,GO:0071840,GO:0071944,GO:0120009 - 0.0000000000000000000000000000000000000000000000000000000003135 213.0
BYD2_k127_9032619_26 Solute carrier family 35 - - - 0.00000000000000000000000000000000000000000000000000000005543 207.0
BYD2_k127_9032619_27 oxidoreductase activity, acting on CH-OH group of donors - - - 0.00000000000000000000000000000000000000000000000000004911 199.0
BYD2_k127_9032619_28 Methyltransferase - - - 0.00000000000000000000000000000000000000000000000001323 190.0
BYD2_k127_9032619_29 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000281 183.0
BYD2_k127_9032619_3 FtsX-like permease family K02004 - - 3.219e-223 726.0
BYD2_k127_9032619_30 Belongs to the CinA family - - - 0.0000000000000000000000000000000000000000000000005153 181.0
BYD2_k127_9032619_31 Pfam:TPM - - - 0.0000000000000000000000000000000000000000005349 169.0
BYD2_k127_9032619_32 paraquat-inducible protein A K03808 - - 0.000000000000000000000000000000000000004833 154.0
BYD2_k127_9032619_33 Thioesterase superfamily - - - 0.0000000000000000000000000000000004247 134.0
BYD2_k127_9032619_34 SMART Cold shock protein K03704 - - 0.0000000000000000000000000000000921 124.0
BYD2_k127_9032619_35 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000002016 133.0
BYD2_k127_9032619_36 thiolester hydrolase activity - - - 0.00000000000000000017 101.0
BYD2_k127_9032619_37 protein histidine kinase activity - - - 0.000000000004975 75.0
BYD2_k127_9032619_38 Glucose dehydrogenase C-terminus - - - 0.0000000005047 73.0
BYD2_k127_9032619_39 Rubrerythrin - - - 0.000000001998 65.0
BYD2_k127_9032619_4 TIGRFAM glutaminyl-tRNA synthetase K01886 - 6.1.1.18 1.405e-221 700.0
BYD2_k127_9032619_40 membrane protein of uknown function UCP014873 - - - 0.000000002245 66.0
BYD2_k127_9032619_41 Domain of unknown function (DUF4124) - - - 0.0000000306 63.0
BYD2_k127_9032619_42 EF hand - - - 0.00001168 51.0
BYD2_k127_9032619_44 BON domain - - - 0.00007506 50.0
BYD2_k127_9032619_45 EF-hand, calcium binding motif - - - 0.0001307 48.0
BYD2_k127_9032619_5 Amidohydrolase family - - - 2.665e-202 644.0
BYD2_k127_9032619_6 Epoxide hydrolase N terminus K01253 - 3.3.2.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001485 537.0
BYD2_k127_9032619_7 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003788 506.0
BYD2_k127_9032619_8 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 479.0
BYD2_k127_9032619_9 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 387.0
BYD2_k127_952938_0 ATP ADP translocase K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 572.0
BYD2_k127_952938_1 Aldo keto - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007712 296.0
BYD2_k127_952938_2 ABC transporter substrate binding protein K01989 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000596 265.0
BYD2_k127_975187_0 KaiC K08482 - - 3.557e-213 675.0
BYD2_k127_975187_1 Belongs to the glutamine synthetase family K01915 - 6.3.1.2 3.171e-197 624.0
BYD2_k127_975187_10 COG0683 ABC-type branched-chain amino acid transport systems, periplasmic component K01999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002556 398.0
BYD2_k127_975187_11 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 360.0
BYD2_k127_975187_12 COG0410 ABC-type branched-chain amino acid transport systems, ATPase component K01996 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 311.0
BYD2_k127_975187_13 COG0411 ABC-type branched-chain amino acid transport systems, ATPase component K01995 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006603 315.0
BYD2_k127_975187_14 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 323.0
BYD2_k127_975187_15 Tripartite tricarboxylate transporter family receptor - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007736 306.0
BYD2_k127_975187_16 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001542 287.0
BYD2_k127_975187_17 Protein of unknown function (DUF2848) - - - 0.0000000000000000000000000000000000000000000000000000000000000000003843 234.0
BYD2_k127_975187_18 ATPases associated with a variety of cellular activities K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000008612 225.0
BYD2_k127_975187_19 carboxylic ester hydrolase activity K01055 - 3.1.1.24 0.0000000000000000000000000000000000000000000000000000000000004638 220.0
BYD2_k127_975187_2 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002796 614.0
BYD2_k127_975187_20 Drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000008061 182.0
BYD2_k127_975187_21 Pyridoxamine 5'-phosphate oxidase like - - - 0.000000000000000000000000000000000000000003658 159.0
BYD2_k127_975187_22 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000667 175.0
BYD2_k127_975187_23 PAS fold - - - 0.0000000000000000000000000000000000002233 152.0
BYD2_k127_975187_24 Glutathione S-transferase, C-terminal domain - - - 0.0000000000000000000000000000000003305 139.0
BYD2_k127_975187_25 KaiB K08481 - - 0.000000000000000000000000000000005562 142.0
BYD2_k127_975187_26 Domain of unknown function (DUF202) K00389 - - 0.00000000000000000000000003724 111.0
BYD2_k127_975187_27 PFAM Signal transduction histidine kinase, subgroup 2, dimerisation and phosphoacceptor domain - - - 0.0000000000000004023 87.0
BYD2_k127_975187_28 - - - - 0.00000000001411 69.0
BYD2_k127_975187_3 4-hydroxyphenylacetate 3-hydroxylase C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003683 587.0
BYD2_k127_975187_30 - - - - 0.000002271 54.0
BYD2_k127_975187_4 LVIVD repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002399 538.0
BYD2_k127_975187_5 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 522.0
BYD2_k127_975187_6 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001 455.0
BYD2_k127_975187_7 leucyl aminopeptidase, aminopeptidase T K18028 - 1.13.11.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005406 435.0
BYD2_k127_975187_8 Pfam Cupin K00450,K11948 - 1.13.11.38,1.13.11.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 426.0
BYD2_k127_975187_9 Aldo/keto reductase family K05275 - 1.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001426 418.0
BYD2_k127_977760_0 4Fe-4S dicluster domain - - - 0.0 1221.0
BYD2_k127_977760_1 Belongs to the IlvD Edd family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006013 533.0
BYD2_k127_977760_2 Serine-pyruvate aminotransferase archaeal aspartate aminotransferase K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006674 426.0
BYD2_k127_977760_3 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001365 353.0