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Overview

ID MAG00080
Name BYD2_bin.35
Sample SMP0002
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Burkholderiales
Family Gallionellaceae
Genus 39-52-133
Species
Assembly information
Completeness (%) 71.0
Contamination (%) 1.79
GC content (%) 58.0
N50 (bp) 9,522
Genome size (bp) 1,861,133

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes1862

Gene name Description KEGG GOs EC E-value Score Sequence
BYD2_k127_1003008_0 SMART adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005989 556.0
BYD2_k127_1003008_1 FAD dependent oxidoreductase K03153 - 1.4.3.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003041 447.0
BYD2_k127_1003008_2 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 300.0
BYD2_k127_1003008_3 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.000000000000000000001078 95.0
BYD2_k127_1003127_0 PFAM peptidase M48 Ste24p - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004567 600.0
BYD2_k127_1003127_1 Thioredoxin domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 319.0
BYD2_k127_100987_0 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 2.711e-202 641.0
BYD2_k127_100987_1 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001197 443.0
BYD2_k127_100987_2 toxin-antitoxin pair type II binding - - - 0.00000000000000000000000000006801 116.0
BYD2_k127_100987_4 PIN domain - - - 0.000000000000003401 75.0
BYD2_k127_1044130_0 HlyD family secretion protein K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 365.0
BYD2_k127_1044130_1 ABC-type transport system involved in lipoprotein release permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002221 303.0
BYD2_k127_1044130_2 NTF2 fold immunity protein - - - 0.000000000002485 71.0
BYD2_k127_1044130_3 - - - - 0.0008835 45.0
BYD2_k127_1128675_0 metal-dependent phosphohydrolase HD sub domain K07814 - - 4.177e-231 725.0
BYD2_k127_1128675_1 Catalyzes the formation of L-homocysteine from O- succinyl-L-homoserine (OSHS) and hydrogen sulfide K01739,K10764 - 2.5.1.48 2.642e-202 635.0
BYD2_k127_1128675_2 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004957 501.0
BYD2_k127_1128675_3 epimerase dehydratase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 292.0
BYD2_k127_1128675_4 Belongs to the GbsR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005351 258.0
BYD2_k127_1128675_5 Competence-damaged protein K03743 - 3.5.1.42 0.00000000000000000000000000000000000000000000000000000000000002787 222.0
BYD2_k127_1128675_6 Predicted integral membrane protein (DUF2269) - - - 0.00000000000000000000000000000000000000000000000000000000001168 211.0
BYD2_k127_1128675_7 Protein of unknown function, DUF393 - - - 0.0000000000000000000000000001181 120.0
BYD2_k127_1128675_8 DoxX-like family - - - 0.00000000000000000003285 97.0
BYD2_k127_1171429_0 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1198.0
BYD2_k127_1171429_1 Belongs to the bacterial glucokinase family K00845 - 2.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001627 376.0
BYD2_k127_1171429_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004071 326.0
BYD2_k127_1171429_3 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000182 228.0
BYD2_k127_1176273_0 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 - 4.1.1.31 0.0 1421.0
BYD2_k127_1176273_1 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006022 504.0
BYD2_k127_1207623_0 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 429.0
BYD2_k127_1207623_1 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001789 293.0
BYD2_k127_1207623_2 phosphoribosyltransferase K02825 - 2.4.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000001281 244.0
BYD2_k127_1207623_3 Reverse transcriptase-like K03469 - 3.1.26.4 0.000000000000000000000000000000000000001402 153.0
BYD2_k127_1207623_4 Protein of unknown function (DUF1653) - - - 0.00000000000000000000005162 101.0
BYD2_k127_1207623_5 Domain of unknown function (DUF3362) - - - 0.0003116 44.0
BYD2_k127_1246382_0 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.019e-256 795.0
BYD2_k127_1246382_1 Belongs to the argininosuccinate synthase family. Type 1 subfamily K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 586.0
BYD2_k127_1246382_2 PFAM NnrS family protein K07234 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 464.0
BYD2_k127_1246382_3 Protein of unknown function (DUF520) K09767 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002329 291.0
BYD2_k127_1246382_4 C-terminal domain of histone - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001928 265.0
BYD2_k127_1246382_5 DJ-1/PfpI family K03152 - 3.5.1.124 0.0000000000000000000000000000000000000000000000000000000000000000000000000003749 258.0
BYD2_k127_1246382_6 Thioredoxin K03671 - - 0.00000000000000000000000000000000000000000000000000000000000000938 216.0
BYD2_k127_1246382_7 Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions K09913 - 2.4.2.1,2.4.2.2 0.000000000000000000000000000000000000000000000000000383 187.0
BYD2_k127_1246382_8 tRNA (guanine-N7-)-methyltransferase activity - - - 0.0000229 48.0
BYD2_k127_1284901_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 4.034e-198 626.0
BYD2_k127_1284901_1 - - - - 0.0000000000000000000000000000000000000000000000000000000604 196.0
BYD2_k127_1284901_2 - - - - 0.0000000000000000000001795 102.0
BYD2_k127_1310822_0 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 3.469e-217 679.0
BYD2_k127_1310822_1 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005473 601.0
BYD2_k127_1310822_2 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 567.0
BYD2_k127_1310822_3 Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling K09001 - 2.7.1.170 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 521.0
BYD2_k127_1310822_4 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006224 441.0
BYD2_k127_1310822_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005327 324.0
BYD2_k127_1310822_6 Required for insertion of 4Fe-4S clusters K15724 - - 0.0000000000000000000000000000000000000000000000000000000000000005584 220.0
BYD2_k127_1310822_7 Yqey-like protein K09117 - - 0.000000000000000000000000000000000000000000000000000000000000001684 220.0
BYD2_k127_1310822_8 Polymer-forming cytoskeletal - - - 0.0000000000000000000000000000000000000000000000000000000000001058 214.0
BYD2_k127_1310822_9 Belongs to the bacterial ribosomal protein bS21 family K02970 - - 0.0000000000000000000000000000000003638 131.0
BYD2_k127_1324410_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1600.0
BYD2_k127_1324410_1 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 - 3.4.11.1 4.075e-205 649.0
BYD2_k127_1324410_11 Protein of unknown function (DUF1622) - - - 0.000000001401 63.0
BYD2_k127_1324410_2 PFAM permease YjgP YjgQ family protein K11720 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002994 544.0
BYD2_k127_1324410_3 PFAM permease YjgP YjgQ family protein K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001191 505.0
BYD2_k127_1324410_4 PFAM thiamine pyrophosphate K01652 - 2.2.1.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006268 420.0
BYD2_k127_1324410_5 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 286.0
BYD2_k127_1324410_6 PFAM DNA polymerase III chi subunit HolC K02339 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000003136 216.0
BYD2_k127_1324410_7 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000008703 156.0
BYD2_k127_1324410_8 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000114 145.0
BYD2_k127_1324410_9 Protein of unknown function (DUF3106) - - - 0.000000000000000000000002649 107.0
BYD2_k127_1328011_0 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 500.0
BYD2_k127_1328011_1 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007929 313.0
BYD2_k127_1328011_2 adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007774 310.0
BYD2_k127_1328011_3 peptidase M24B X-Pro dipeptidase aminopeptidase domain protein K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000001547 231.0
BYD2_k127_1328011_4 gag-polyprotein putative aspartyl protease K06985 - - 0.0000000000000000000000000000000000000000000000002092 181.0
BYD2_k127_1345943_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001018 313.0
BYD2_k127_1345943_1 GlcNAc-PI de-N-acetylase - - - 0.00000000000000000000000000000000000000000002873 182.0
BYD2_k127_1345943_2 PFAM Uncharacterised BCR, COG1649 - - - 0.000000000000000000000000000005142 130.0
BYD2_k127_1345943_3 peptidyl-tyrosine sulfation - - - 0.0001907 54.0
BYD2_k127_1366513_0 PFAM bifunctional deaminase-reductase domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001424 313.0
BYD2_k127_1366513_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002458 296.0
BYD2_k127_1366513_2 PFAM Glyoxalase bleomycin resistance protein dioxygenase K04750 - - 0.0000000000000000000000000000000000000000000000000000000000000000278 225.0
BYD2_k127_1366513_3 - - - - 0.00000000000000000000000000000000000000000000002499 172.0
BYD2_k127_1373187_0 Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate K03271 - 5.3.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001187 313.0
BYD2_k127_1373187_1 LppC putative lipoprotein K07121 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003434 322.0
BYD2_k127_1373187_2 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose K21345 - 2.7.7.70 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007604 273.0
BYD2_k127_1373187_3 BON domain - - - 0.000000000000000000000000000000000000000000000000001125 188.0
BYD2_k127_1373187_4 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000000000000001395 184.0
BYD2_k127_1373187_5 Uncharacterised protein family UPF0102 K07460 - - 0.00000000000000000000000000000000000001341 150.0
BYD2_k127_1373187_6 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000002592 100.0
BYD2_k127_1373187_7 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 - 2.1.1.163,2.1.1.201 0.0000005826 51.0
BYD2_k127_1379850_0 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 3.39e-264 827.0
BYD2_k127_1379850_1 PFAM ATPase associated with various cellular activities AAA_3 K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005676 514.0
BYD2_k127_1379850_2 Protein of unknown function DUF58 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 475.0
BYD2_k127_1379850_3 PFAM aminotransferase class I and II K14260 - 2.6.1.2,2.6.1.66 0.0000000000000000000000000000000000000000000000000000000001007 205.0
BYD2_k127_1379850_4 Protein of unknown function (DUF498/DUF598) - - - 0.00000000000000000000000000000000000001106 151.0
BYD2_k127_1388819_0 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 8.771e-254 787.0
BYD2_k127_1388819_1 Nucleoside H+ symporter K05820 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002377 567.0
BYD2_k127_1388819_2 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001104 255.0
BYD2_k127_1388819_3 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000004454 157.0
BYD2_k127_1388819_4 Hsp70 protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 0.00000000000000000000000000000001574 126.0
BYD2_k127_1392577_0 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 - 2.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001877 486.0
BYD2_k127_1392577_1 Inositol monophosphatase family K01092 - 3.1.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 458.0
BYD2_k127_1392577_2 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 420.0
BYD2_k127_1392577_3 PFAM EAL domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002228 430.0
BYD2_k127_1392577_4 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K02533 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 351.0
BYD2_k127_1392577_5 Transcriptional regulator K13643 - - 0.00000000000000000000000000000000000000000000000000000000000004786 216.0
BYD2_k127_1392577_6 hydroxypyruvate reductase K11529 - 2.7.1.165 0.00000000000000000000000007925 108.0
BYD2_k127_1409935_0 Soluble lytic murein transglycosylase L domain K08309 - - 1.047e-250 790.0
BYD2_k127_1409935_1 Probable RNA and SrmB- binding site of polymerase A K00974 - 2.7.7.72 1.011e-210 660.0
BYD2_k127_1409935_2 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000005575 235.0
BYD2_k127_1409935_3 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000009142 186.0
BYD2_k127_1409935_4 Abc transporter K01996 - - 0.000000000608 61.0
BYD2_k127_1466554_0 TonB-dependent receptor K02014 - - 0.0 1174.0
BYD2_k127_1466554_1 exo-alpha-(2->6)-sialidase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002974 454.0
BYD2_k127_1466554_2 Trypsin-like peptidase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001814 293.0
BYD2_k127_1466554_3 Uracil DNA glycosylase superfamily - - - 0.000000000000000000000000000000000000000000000001049 176.0
BYD2_k127_1466554_4 Inner membrane component of T3SS, cytoplasmic domain - - - 0.00000000000000000000000000000000000001031 157.0
BYD2_k127_1469501_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 496.0
BYD2_k127_1469501_1 PFAM metallophosphoesterase K07098 - - 0.00000000000000000000000000000000000000000000000000000000000002038 220.0
BYD2_k127_1470356_0 ABC transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008266 461.0
BYD2_k127_1470356_1 Permease MlaE K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001333 432.0
BYD2_k127_1470356_2 MlaC protein K07323 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 285.0
BYD2_k127_1470356_3 PFAM Mammalian cell entry related domain protein K02067 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000988 253.0
BYD2_k127_1470356_4 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000002027 179.0
BYD2_k127_1470356_5 Belongs to the BolA IbaG family - - - 0.0000000000000000000000000005844 115.0
BYD2_k127_1470356_6 response to antibiotic K07122 - - 0.0000000000000008517 81.0
BYD2_k127_1494404_0 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001079 516.0
BYD2_k127_1494404_1 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002055 490.0
BYD2_k127_1494404_2 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.00000000000000000000000000000000000000000000000000000000000001626 218.0
BYD2_k127_1494404_3 protein transport across the cell outer membrane K08084 - - 0.000000000000000000000006821 107.0
BYD2_k127_1494404_4 pilus assembly protein PilE K02655 - - 0.00000000000000000000002478 106.0
BYD2_k127_152575_0 FeS assembly protein SufB K09014 - - 1.489e-281 869.0
BYD2_k127_152575_1 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 4.909e-214 674.0
BYD2_k127_152575_10 Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase K02356 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000949 319.0
BYD2_k127_152575_11 HNH nucleases - - - 0.00000000000000000000000000000000000000000000000004152 184.0
BYD2_k127_152575_13 NifU-like N terminal domain K04488 - - 0.000000000000000000000000000000000008897 140.0
BYD2_k127_152575_2 Diguanylate cyclase - - - 1.677e-207 672.0
BYD2_k127_152575_3 assembly protein SufD K09015 - - 8.912e-200 632.0
BYD2_k127_152575_4 abc-type branched-chain amino acid transport K01999 - - 8.482e-198 624.0
BYD2_k127_152575_5 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 4.058e-196 621.0
BYD2_k127_152575_6 Belongs to the peptidase M48B family K03799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007848 486.0
BYD2_k127_152575_7 Belongs to the glucose-6-phosphate 1-epimerase family K01792 - 5.1.3.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002778 469.0
BYD2_k127_152575_8 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000434 439.0
BYD2_k127_152575_9 FeS assembly ATPase SufC K09013 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004085 375.0
BYD2_k127_1534044_0 PFAM RNA-binding protein AU-1 Ribonuclease E G K08301 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 413.0
BYD2_k127_1534044_1 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 287.0
BYD2_k127_1534044_2 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.000000000000000000000000000000000000000000000000000000000000000000002015 239.0
BYD2_k127_1534044_3 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.000000000000000000000000000000000000000005354 157.0
BYD2_k127_1534044_4 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969 - 2.7.7.18 0.000000001752 59.0
BYD2_k127_1560100_0 HELICc2 K03722 - 3.6.4.12 4.485e-249 775.0
BYD2_k127_1560100_1 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000461 387.0
BYD2_k127_1560100_2 PFAM Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001637 272.0
BYD2_k127_1560100_3 - - - - 0.00000000000000000000000000000000000000000002534 169.0
BYD2_k127_1560100_4 - - - - 0.0000000000000000000000000007722 120.0
BYD2_k127_1575928_0 Peptidase family M48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 614.0
BYD2_k127_1575928_1 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003945 481.0
BYD2_k127_1575928_2 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 385.0
BYD2_k127_1594530_0 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K02021,K11085 - - 1.236e-256 799.0
BYD2_k127_1594530_1 COG0438 Glycosyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002791 417.0
BYD2_k127_1594530_2 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004396 258.0
BYD2_k127_1629035_0 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002524 307.0
BYD2_k127_1629035_1 probably involved in intracellular septation K06190 - - 0.00000000000000000000000000000000000000000000000000000000000000001283 229.0
BYD2_k127_1629035_2 YCII-related domain K09780 - - 0.00000000000000000000000000000000000000000001667 163.0
BYD2_k127_1629035_3 BolA-like protein K05527 - - 0.0000000000000000000000002839 111.0
BYD2_k127_1632158_0 Diguanylate cyclase - - - 2.667e-273 870.0
BYD2_k127_1632158_1 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 5.182e-255 799.0
BYD2_k127_1632158_10 cytochrome - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001904 264.0
BYD2_k127_1632158_11 methionine sulfoxide reductase K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000007952 250.0
BYD2_k127_1632158_12 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000001823 243.0
BYD2_k127_1632158_13 type II secretion system protein G K02456 - - 0.00000000000000000000000000000000000000000000000000000000000000006665 225.0
BYD2_k127_1632158_14 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000005436 227.0
BYD2_k127_1632158_15 - - - - 0.0000000000000000000000000000000000000000000000000000000001063 204.0
BYD2_k127_1632158_16 - - - - 0.0000000000000000000000000000000000000000000000000000000001715 217.0
BYD2_k127_1632158_17 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000002264 209.0
BYD2_k127_1632158_18 Prokaryotic N-terminal methylation motif K02456 - - 0.000000000000000000000000000000000000000000000000000001726 199.0
BYD2_k127_1632158_19 - - - - 0.0000000000000000000000000000000000000000000000000006811 188.0
BYD2_k127_1632158_2 polysaccharide export protein - - - 2.651e-243 776.0
BYD2_k127_1632158_20 - - - - 0.000000000000000000000000000000000000000000000000001049 193.0
BYD2_k127_1632158_21 Glutaredoxin - - - 0.000000000000000000000000000000000000000000000000007204 184.0
BYD2_k127_1632158_22 Type II secretory pathway, pseudopilin - - - 0.0000000000000000000000000000000000000000000000000113 186.0
BYD2_k127_1632158_23 prepilin-type N-terminal cleavage methylation K02456 - - 0.0000000000000000000000000000000000000000000000002632 178.0
BYD2_k127_1632158_24 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001763 185.0
BYD2_k127_1632158_25 Domain of unknown function (DUF4124) K08309 - - 0.00000000000000000000000000000000000000000000000705 183.0
BYD2_k127_1632158_26 - - - - 0.00000000000000000000000000000001207 133.0
BYD2_k127_1632158_27 Transcriptional regulator - - - 0.00000000000000000000000000000006708 126.0
BYD2_k127_1632158_28 carbon utilization - - - 0.0000000000000000000000000000004016 131.0
BYD2_k127_1632158_29 Acetyltransferase (Isoleucine patch superfamily) K18234 - - 0.00000000000000000000000000002927 126.0
BYD2_k127_1632158_3 type II and III secretion system protein K02453 - - 2.293e-237 756.0
BYD2_k127_1632158_30 - - - - 0.0000000000000000000000007745 111.0
BYD2_k127_1632158_31 Polysaccharide biosynthesis protein - - - 0.00000000000000006451 93.0
BYD2_k127_1632158_32 Domain of unknown function (DUF3362) - - - 0.0003 49.0
BYD2_k127_1632158_4 Type II secretion system (T2SS), protein F K02455 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002619 482.0
BYD2_k127_1632158_5 His Kinase A (phosphoacceptor) domain K11527 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003368 491.0
BYD2_k127_1632158_6 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005696 406.0
BYD2_k127_1632158_7 response regulator K14979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004052 316.0
BYD2_k127_1632158_8 Chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 301.0
BYD2_k127_1632158_9 Catalyzes the synthesis of activated sulfate K00860,K00955,K00958 - 2.7.1.25,2.7.7.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004316 282.0
BYD2_k127_1636016_0 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 6.117e-254 788.0
BYD2_k127_1636016_1 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 6.758e-221 691.0
BYD2_k127_1636016_10 transcription factor binding - - - 0.00000000000000000000000000000000000000000000000000000000000007366 215.0
BYD2_k127_1636016_11 COG2346, Truncated hemoglobins K06886,K07006 - - 0.0000000000000000000000000000000000000000000000000000000000006077 226.0
BYD2_k127_1636016_12 small GTP-binding protein K06945 - - 0.00000000000000000000000000000000000000000000000000000004204 201.0
BYD2_k127_1636016_13 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.000000000000000000000000000000000000000003057 156.0
BYD2_k127_1636016_14 Roadblock/LC7 domain K07131 - - 0.00000000000000000000003446 104.0
BYD2_k127_1636016_15 - - - - 0.0000001167 61.0
BYD2_k127_1636016_16 PFAM PsiF repeat protein - - - 0.00006997 49.0
BYD2_k127_1636016_2 HD-GYP domain - GO:0003674,GO:0003824,GO:0004112,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008081,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009166,GO:0009187,GO:0009214,GO:0009987,GO:0016787,GO:0016788,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042578,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046434,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007063 611.0
BYD2_k127_1636016_3 Chromate transporter K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001156 477.0
BYD2_k127_1636016_4 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 - 2.1.2.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000124 403.0
BYD2_k127_1636016_5 PFAM Dual specificity protein phosphatase K14165 - 3.1.3.16,3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003388 372.0
BYD2_k127_1636016_6 Deoxynucleoside kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 334.0
BYD2_k127_1636016_7 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004363 330.0
BYD2_k127_1636016_8 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) K00950 - 2.7.6.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000006465 258.0
BYD2_k127_1636016_9 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000000000000000000000000000002115 218.0
BYD2_k127_1668092_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1566.0
BYD2_k127_1668092_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 - - 6.458e-221 690.0
BYD2_k127_1668092_10 Protein of unknown function (DUF721) - - - 0.0000000003389 69.0
BYD2_k127_1668092_11 - - - - 0.00000003237 57.0
BYD2_k127_1668092_2 Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate K00620 - 2.3.1.1,2.3.1.35 1.318e-195 616.0
BYD2_k127_1668092_3 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 563.0
BYD2_k127_1668092_4 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008061 527.0
BYD2_k127_1668092_5 Peptidase family M23 K08259 - 3.4.24.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000315 351.0
BYD2_k127_1668092_6 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003758 298.0
BYD2_k127_1668092_7 Cyclic nucleotide-monophosphate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009151 254.0
BYD2_k127_1668092_8 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000005709 190.0
BYD2_k127_1668092_9 Protein of unknown function (DUF815) K06923 - - 0.00000000000000000000000001052 109.0
BYD2_k127_1721399_0 PFAM ATP-binding region ATPase domain protein K07645 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000185 538.0
BYD2_k127_1721399_1 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003006 527.0
BYD2_k127_1721399_2 Domain of unknown function (DUF1963) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006866 441.0
BYD2_k127_1721399_3 Flavin reductase like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001524 325.0
BYD2_k127_1721399_4 Mut7-C RNAse domain K09122 - - 0.000000000000000000000000000000000000000000000000000000000000000005567 228.0
BYD2_k127_1721399_5 AAA domain K16898 - 3.6.4.12 0.000000000000000000000000000002189 121.0
BYD2_k127_1721399_6 - - - - 0.0000000000000001113 85.0
BYD2_k127_1730561_0 tRNA synthetases class I (W and Y) K01867 - 6.1.1.2 3.861e-241 748.0
BYD2_k127_1730561_1 tRNA-splicing ligase RtcB K14415,K18148 - 6.5.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007084 586.0
BYD2_k127_1730561_10 Ankyrin repeats (many copies) - - - 0.0000000000000000000000000000000000000000000000000000000000000009777 224.0
BYD2_k127_1730561_11 LPP20 lipoprotein - - - 0.0000000000000000000000000000000007914 139.0
BYD2_k127_1730561_12 - - - - 0.000000000000000000000000000000001801 132.0
BYD2_k127_1730561_13 LPP20 lipoprotein - - - 0.0000000004021 71.0
BYD2_k127_1730561_2 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005249 420.0
BYD2_k127_1730561_3 SpoU rRNA Methylase family K03437 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001468 340.0
BYD2_k127_1730561_4 protein conserved in bacteria K09859 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006005 336.0
BYD2_k127_1730561_5 Peptidase family M50 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000876 297.0
BYD2_k127_1730561_6 peptide chain release factor K02839 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001711 273.0
BYD2_k127_1730561_7 Segregation and condensation complex subunit ScpB K06024 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000008348 274.0
BYD2_k127_1730561_8 Peptidoglycan-synthase activator LpoB K07337 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001718 255.0
BYD2_k127_1730561_9 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters K06204 - - 0.0000000000000000000000000000000000000000000000000000000000000004704 220.0
BYD2_k127_1951220_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 0.0 1105.0
BYD2_k127_1951220_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 0.0 1098.0
BYD2_k127_1951220_10 Peptidase S24-like K01356 - 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001217 281.0
BYD2_k127_1951220_11 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine K03648 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000009644 230.0
BYD2_k127_1951220_12 - - - - 0.000000000000000000000000000000000000000000000000009888 183.0
BYD2_k127_1951220_13 response to abiotic stimulus K06867 - - 0.0000000000000000000000000000000000000000001608 171.0
BYD2_k127_1951220_14 Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions K03530 - - 0.00000000000000000000000000000000000000004178 153.0
BYD2_k127_1951220_15 Bacterial type II and III secretion system protein - - - 0.00000000000000000000000000000000000001149 148.0
BYD2_k127_1951220_16 COG0790 FOG TPR repeat, SEL1 subfamily K07126 - - 0.000000000000000000000000000000000003514 147.0
BYD2_k127_1951220_2 PFAM AMP-dependent synthetase and ligase K05939 - 2.3.1.40,6.2.1.20 0.0 1019.0
BYD2_k127_1951220_3 Diguanylate cyclase - - - 2.531e-286 914.0
BYD2_k127_1951220_4 Diguanylate cyclase (GGDEF) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 563.0
BYD2_k127_1951220_5 Major Facilitator Superfamily K08227 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001384 514.0
BYD2_k127_1951220_6 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 495.0
BYD2_k127_1951220_7 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 457.0
BYD2_k127_1951220_8 PFAM UMUC domain protein DNA-repair protein K03502 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008961 450.0
BYD2_k127_1951220_9 peroxidase K07223 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 381.0
BYD2_k127_1972454_0 Sulfate transporter antisigma-factor antagonist STAS K03321 - - 1.59e-280 872.0
BYD2_k127_1972454_1 transporter - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001781 616.0
BYD2_k127_1972454_2 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007674 502.0
BYD2_k127_1972454_3 Response regulators consisting of a CheY-like receiver domain and a - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 381.0
BYD2_k127_1972454_4 Protein of unknown function, DUF599 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 308.0
BYD2_k127_1972454_5 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000003926 120.0
BYD2_k127_2030836_0 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K00646,K09458 GO:0003674,GO:0003824,GO:0004312,GO:0004315,GO:0016740,GO:0016746,GO:0016747,GO:0033817 2.3.1.179 2.232e-246 763.0
BYD2_k127_2030836_1 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002966 449.0
BYD2_k127_2030836_2 TIGRFAM DNA polymerase III, delta prime subunit K02341 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 430.0
BYD2_k127_2030836_3 KR domain K00059 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0010130,GO:0016043,GO:0016491,GO:0016614,GO:0016616,GO:0018913,GO:0018915,GO:0022607,GO:0042537,GO:0043933,GO:0044085,GO:0044237,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008331 389.0
BYD2_k127_2030836_4 TatD related DNase K03424 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 383.0
BYD2_k127_2030836_5 TIGRFAM malonyl CoA-acyl carrier protein transacylase K00645,K13935,K15355 - 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003101 379.0
BYD2_k127_2030836_6 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 - 2.7.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005895 323.0
BYD2_k127_2030836_7 Amino-transferase class IV K02619 - 4.1.3.38 0.000000000000000000000000000000000000000000000000000000000000000000000000000003075 271.0
BYD2_k127_2030836_8 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.000000000000000000000000000000000008196 137.0
BYD2_k127_2054193_0 Radical SAM K04069 - 1.97.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005423 574.0
BYD2_k127_2054193_1 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001419 357.0
BYD2_k127_2054193_2 Belongs to the MEMO1 family K06990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 359.0
BYD2_k127_2054193_3 PFAM AMMECR1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001309 244.0
BYD2_k127_2054193_4 PFAM Ankyrin K10799 - 2.4.2.30 0.0000000000000001354 83.0
BYD2_k127_2113224_0 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 420.0
BYD2_k127_2113224_1 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002583 368.0
BYD2_k127_2113224_2 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 305.0
BYD2_k127_2113224_3 Nudix N-terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003955 287.0
BYD2_k127_2113224_4 CHASE2 K01768 - 4.6.1.1 0.00000000000000000000000000000000000000000000003722 170.0
BYD2_k127_2113224_5 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000002306 164.0
BYD2_k127_2144013_0 Poly-beta-1,6-N-acetyl-D-glucosamine synthase K11936 - - 3.617e-207 651.0
BYD2_k127_2144013_1 Putative zinc- or iron-chelating domain - - - 0.0000000000000000000000000000000000001083 149.0
BYD2_k127_2144013_2 - - - - 0.0000000000000000000001794 108.0
BYD2_k127_2158232_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 1.068e-314 971.0
BYD2_k127_2158232_1 polysaccharide export protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004544 621.0
BYD2_k127_2158232_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002186 329.0
BYD2_k127_2158232_3 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001359 269.0
BYD2_k127_2158232_4 - - - - 0.0000000107 56.0
BYD2_k127_2158232_5 - - - - 0.00001077 47.0
BYD2_k127_2158232_6 - - - - 0.00001663 48.0
BYD2_k127_2272986_0 PFAM NADH dehydrogenase (ubiquinone) 30 kDa subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000652 533.0
BYD2_k127_2272986_1 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 361.0
BYD2_k127_2272986_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 351.0
BYD2_k127_2272986_3 PFAM NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001833 323.0
BYD2_k127_2284618_0 PFAM Serine threonine-protein kinase-like domain K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001487 530.0
BYD2_k127_2284618_1 adenylyl cyclase class-3 4 guanylyl cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003902 449.0
BYD2_k127_2284618_2 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000009191 280.0
BYD2_k127_2284618_3 Catalyzes the oxidation of L-aspartate to iminoaspartate K00278 - 1.4.3.16 0.0000000000000000000000000000000000000000000000000000000984 196.0
BYD2_k127_2284618_4 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000000000000000000000001374 145.0
BYD2_k127_2284618_5 - K19168 - - 0.000000000001289 73.0
BYD2_k127_2307228_0 serine threonine protein kinase K12132 - 2.7.11.1 0.0 1122.0
BYD2_k127_2307228_1 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000307 552.0
BYD2_k127_2307228_2 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000074 432.0
BYD2_k127_2307228_3 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004084 358.0
BYD2_k127_2320895_0 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 5.092e-195 614.0
BYD2_k127_2320895_1 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 GO:0002097,GO:0002099,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016853,GO:0018130,GO:0019438,GO:0034404,GO:0034470,GO:0034641,GO:0034654,GO:0034660,GO:0042455,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0051075,GO:0055086,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008433 516.0
BYD2_k127_2320895_2 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006803 250.0
BYD2_k127_2320895_3 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000001479 244.0
BYD2_k127_2320895_4 NfeD-like C-terminal, partner-binding - - - 0.0000000000000000000000000000000000000000000000000005039 187.0
BYD2_k127_2320968_0 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 0.0 1251.0
BYD2_k127_2320968_1 Participates in both transcription termination and antitermination K02600 - - 6.085e-277 856.0
BYD2_k127_2320968_2 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 5.221e-227 709.0
BYD2_k127_2320968_3 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000298 426.0
BYD2_k127_2320968_4 Required for maturation of 30S ribosomal subunits K09748 - - 0.00000000000000000000000000000000000000000000000000000000000000000005211 233.0
BYD2_k127_2320968_5 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000000000000000000000000000000002389 184.0
BYD2_k127_2320968_6 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000000000000000000469 158.0
BYD2_k127_2320968_7 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.000000000000000000000001816 104.0
BYD2_k127_2328269_0 Glycosyltransferase family 9 (heptosyltransferase) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004479 516.0
BYD2_k127_2328269_1 Peptidase family S49 K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003913 509.0
BYD2_k127_2328269_2 Lysylphosphatidylglycerol synthase TM region K07027 - - 0.000000000000000000000000000000000000000000000000000000000000000000001185 248.0
BYD2_k127_2328269_3 Synthesizes selenophosphate from selenide and ATP K01008 - 2.7.9.3 0.0000000000000000000000000008355 115.0
BYD2_k127_2329730_0 Putative diguanylate phosphodiesterase - - - 7.485e-254 810.0
BYD2_k127_2329730_1 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001968 242.0
BYD2_k127_2329730_2 PFAM Spermine synthase K00797 - 2.5.1.16 0.0000000000000000000000000000000000000000001364 161.0
BYD2_k127_2329730_3 Uncharacterized ACR, COG1993 - - - 0.0000000000000000000000000000001507 133.0
BYD2_k127_2329730_4 Predicted membrane protein (DUF2157) - - - 0.00000000000000000000000000000526 131.0
BYD2_k127_2375152_0 long-chain fatty acid transport protein K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002913 579.0
BYD2_k127_2375152_1 transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000854 285.0
BYD2_k127_2375152_2 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000972 282.0
BYD2_k127_2375152_3 Sulfurtransferase - - - 0.0000000000000000000000000000000003131 131.0
BYD2_k127_2375152_4 LytTr DNA-binding domain K08083 - - 0.00000000000000000000000000485 111.0
BYD2_k127_2376425_0 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 445.0
BYD2_k127_2376425_1 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002183 323.0
BYD2_k127_2376425_2 PFAM Biopolymer transport protein ExbD TolR K03559 - - 0.000000000000000000000000000000000000000000000000001293 185.0
BYD2_k127_2376425_3 Trm112p-like protein K09791 - - 0.00000000000000007607 81.0
BYD2_k127_2388603_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 1.003e-314 985.0
BYD2_k127_2388603_1 TIGRFAM DNA internalization-related competence protein ComEC Rec2 K02238 - - 1.247e-307 961.0
BYD2_k127_2388603_2 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001742 441.0
BYD2_k127_2388603_3 Histidine kinase K20975 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000957 334.0
BYD2_k127_2388603_4 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000007292 251.0
BYD2_k127_2388603_5 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.000000000000000000000000000000000000000000000000000000000000008556 232.0
BYD2_k127_2388603_6 Thioredoxin-like K07152 - - 0.0000000000000000000000000000000000000000000000000000000000004051 218.0
BYD2_k127_2388603_7 mercury ion transmembrane transporter activity K07213 - - 0.000000000000000000000000000000000000000007979 160.0
BYD2_k127_2596918_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 2.373e-299 931.0
BYD2_k127_2596918_1 Endoribonuclease L-PSP K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000000000000000000002437 220.0
BYD2_k127_2596918_2 TIGRFAM HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.00000000000000000000000000000000000000000000000000000000001949 207.0
BYD2_k127_2644377_0 PFAM permease K07089 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004448 553.0
BYD2_k127_2644377_1 Methyltransferase type 11 K07755 - 2.1.1.137 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002305 433.0
BYD2_k127_2644377_2 Sodium Bile acid symporter family K03325 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002723 357.0
BYD2_k127_2644377_3 SMART Protein-tyrosine phosphatase, low molecular weight K03741 - 1.20.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002741 301.0
BYD2_k127_2644377_4 Sigma-70, region 4 K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002913 265.0
BYD2_k127_2644377_5 Na H antiporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002468 253.0
BYD2_k127_2644377_6 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000000000000000000000001769 175.0
BYD2_k127_2644377_7 Thioredoxin domain - - - 0.0000000000000000000000000000000000002113 141.0
BYD2_k127_2644377_8 - - - - 0.0000000000000000000001481 111.0
BYD2_k127_2661325_0 Tetratricopeptide repeats - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006699 583.0
BYD2_k127_2661325_1 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003622 447.0
BYD2_k127_2661325_2 PFAM ABC transporter related K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 394.0
BYD2_k127_2661325_3 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 - - 0.000000000000000000000000000000000000000000000000000000000005244 216.0
BYD2_k127_2661325_4 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.0000000003413 61.0
BYD2_k127_2661325_5 ABC-2 family transporter protein K01992 - - 0.000000002863 61.0
BYD2_k127_2673791_0 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 7.57e-214 669.0
BYD2_k127_2673791_1 TIGRFAM cell shape determining protein, MreB Mrl family K03569 - - 8.041e-209 651.0
BYD2_k127_2673791_2 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005923 403.0
BYD2_k127_2673791_3 rod shape-determining protein MreD K03571 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000155 278.0
BYD2_k127_2673791_4 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02435 - 6.3.5.6,6.3.5.7 0.00000000000000000000000000000000000001993 145.0
BYD2_k127_2673791_5 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.00002219 50.0
BYD2_k127_2694838_0 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 2.403e-320 990.0
BYD2_k127_2694838_1 PFAM peptidase S1 and S6 chymotrypsin Hap K04691,K04772 - - 1.619e-203 638.0
BYD2_k127_2694838_10 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 366.0
BYD2_k127_2694838_11 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003303 355.0
BYD2_k127_2694838_12 Imidazoleglycerol-phosphate dehydratase K01693 - 4.2.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 344.0
BYD2_k127_2694838_13 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000002796 244.0
BYD2_k127_2694838_14 Stringent starvation protein B K03600 - - 0.0000000000000000000000000000000000000000000000000000000001493 205.0
BYD2_k127_2694838_15 HIT domain K02503 - - 0.0000000000000000000000000000000000000000000000000000000003145 206.0
BYD2_k127_2694838_16 - - - - 0.0000000000000000000000000000000000000000000000006769 180.0
BYD2_k127_2694838_17 Phosphoribosyl-ATP pyrophosphohydrolase K01523 - 3.6.1.31 0.00000000000000000000000000000000000000000002639 162.0
BYD2_k127_2694838_18 Sigma-70 factor, region 1.2 K03089 - - 0.0000000000000000000000000000000000000000002181 161.0
BYD2_k127_2694838_19 STAS domain K20978 - - 0.000000000000000000000000001044 117.0
BYD2_k127_2694838_2 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002397 558.0
BYD2_k127_2694838_20 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.000000000000000000000002662 106.0
BYD2_k127_2694838_21 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116 - - 0.000000000000000000000009048 102.0
BYD2_k127_2694838_3 Sigma factor PP2C-like phosphatases K20977 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001055 528.0
BYD2_k127_2694838_4 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001865 466.0
BYD2_k127_2694838_5 Histidine biosynthesis protein K01814 GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004422 450.0
BYD2_k127_2694838_6 PFAM membrane protein involved in aromatic hydrocarbon degradation K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002042 427.0
BYD2_k127_2694838_7 NIF3 (NGG1p interacting factor 3) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002766 401.0
BYD2_k127_2694838_8 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006269 385.0
BYD2_k127_2694838_9 Glutathione S-transferase, C-terminal domain K03599 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004904 377.0
BYD2_k127_2741596_0 Oxidoreductase FAD-binding domain protein K00523 - 1.17.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 560.0
BYD2_k127_2741596_1 HemY protein N-terminus K02498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000283 514.0
BYD2_k127_2741596_2 HemX, putative uroporphyrinogen-III C-methyltransferase K02496,K13543 - 2.1.1.107,4.2.1.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009032 371.0
BYD2_k127_2741596_3 epimerase dehydratase - - - 0.000000000000000000000000000000000000006656 163.0
BYD2_k127_2741596_4 aspartic-type endopeptidase activity K06985 - - 0.00000000003477 64.0
BYD2_k127_2770199_0 Sodium:solute symporter family K14393 - - 0.0 1082.0
BYD2_k127_2770199_1 Two-component sensor kinase N-terminal K07649 - 2.7.13.3 8.228e-194 614.0
BYD2_k127_2770199_2 Two component transcriptional regulator, winged helix family K02483,K07666,K07774 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006602 368.0
BYD2_k127_2770199_3 Fructosamine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003151 238.0
BYD2_k127_2770199_4 - - - - 0.0000000000000000000000000000000000000000000003612 170.0
BYD2_k127_2770199_5 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000001429 148.0
BYD2_k127_2770199_6 Domain of unknown function (DUF4212) - - - 0.0000000000000000000000000000000000003865 142.0
BYD2_k127_2770199_7 - - - - 0.000000000000000000001168 97.0
BYD2_k127_2770199_8 PFAM Exonuclease RNase T and DNA polymerase III K02342 - 2.7.7.7 0.0000000000000000005972 88.0
BYD2_k127_2818185_0 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009691 486.0
BYD2_k127_2818185_1 PFAM pyruvate phosphate dikinase PEP pyruvate-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008355 431.0
BYD2_k127_2818185_2 PFAM glycosyl transferase family 39 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 360.0
BYD2_k127_2818185_3 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000234 224.0
BYD2_k127_2818185_4 PIN domain - - - 0.0000000000000000000000000000000000000000003586 161.0
BYD2_k127_2818185_5 Putative quorum-sensing-regulated virulence factor K09954 - - 0.0000000000000000000000000000000000101 136.0
BYD2_k127_2818185_6 positive regulation of growth - - - 0.00000000000000000003809 92.0
BYD2_k127_2818185_7 PFAM glutaredoxin - - - 0.000000000000000006975 87.0
BYD2_k127_2912340_0 Outer membrane usher protein K07347 - - 5.838e-289 908.0
BYD2_k127_2912340_1 PFAM lipolytic protein G-D-S-L family K01073 - 3.1.2.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 303.0
BYD2_k127_2912340_2 Pili and flagellar-assembly chaperone, PapD N-terminal domain K07346 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000663 293.0
BYD2_k127_2912340_3 Spore Coat Protein U domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001185 242.0
BYD2_k127_2912340_5 - - - - 0.0000000000000001297 81.0
BYD2_k127_2912340_6 - - - - 0.000008774 49.0
BYD2_k127_2917051_0 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005489 412.0
BYD2_k127_2917051_1 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004459 361.0
BYD2_k127_2917051_2 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005905 320.0
BYD2_k127_2917051_3 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003244 261.0
BYD2_k127_2917051_4 Cupin 2, conserved barrel domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000005989 216.0
BYD2_k127_2917051_5 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000005718 66.0
BYD2_k127_2929196_0 TIGRFAM lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 6.127e-196 617.0
BYD2_k127_2929196_1 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006023 380.0
BYD2_k127_2929196_2 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000000000000002616 189.0
BYD2_k127_2929196_3 Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000004305 164.0
BYD2_k127_2995123_0 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01533 - 3.6.3.4 0.0 1255.0
BYD2_k127_2995123_1 Belongs to the anaerobic coproporphyrinogen-III oxidase family - GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006782,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046501,GO:0048037,GO:0051186,GO:0051188,GO:0051536,GO:0051539,GO:0051540,GO:0051989,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 - 8.062e-275 848.0
BYD2_k127_2995123_10 - - - - 0.00000000000000000000000000000000000000000376 160.0
BYD2_k127_2995123_11 PFAM cytochrome oxidase maturation protein cbb3-type - - - 0.0000000000000000000137 93.0
BYD2_k127_2995123_12 Cbb3-type cytochrome oxidase component FixQ - - - 0.0000000000000000001235 89.0
BYD2_k127_2995123_2 Nitronate monooxygenase K00459 - 1.13.12.16 9.486e-240 744.0
BYD2_k127_2995123_3 TIGRFAM cytochrome c oxidase accessory protein CcoG - - - 4.731e-236 737.0
BYD2_k127_2995123_4 AsmA family K07289 - - 6.774e-224 712.0
BYD2_k127_2995123_5 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001178 484.0
BYD2_k127_2995123_6 PFAM cytochrome C oxidase mono-heme subunit FixO K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 437.0
BYD2_k127_2995123_7 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004865 340.0
BYD2_k127_2995123_8 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002858 294.0
BYD2_k127_2995123_9 FixH - - - 0.00000000000000000000000000000000000000000000000000000000000000000007292 236.0
BYD2_k127_3005077_0 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 318.0
BYD2_k127_3005077_1 YoeB-like toxin of bacterial type II toxin-antitoxin system - - - 0.00000000000000000000000000000000000000000004875 160.0
BYD2_k127_3005077_2 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.0000000000000000000000000008672 114.0
BYD2_k127_3005077_4 Ribosomal protein L11 methyltransferase (PrmA) - - - 0.0003521 45.0
BYD2_k127_3137677_0 Alcohol dehydrogenase zinc-binding domain protein K00344 - 1.6.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001974 508.0
BYD2_k127_3137677_1 TatD related DNase K03424 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003501 374.0
BYD2_k127_3137677_2 PFAM UBA THIF-type NAD FAD binding protein K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001791 252.0
BYD2_k127_3137677_3 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 0.00000000000001092 74.0
BYD2_k127_3255270_0 Likely ribonuclease with RNase H fold. K06959 - - 6.423e-277 857.0
BYD2_k127_3255270_1 response regulator - - - 0.000000002046 64.0
BYD2_k127_327414_0 PFAM type II and III secretion system protein K02453 - - 4.594e-203 647.0
BYD2_k127_327414_1 AAA domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001605 545.0
BYD2_k127_327414_2 Sigma-54 interaction domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 524.0
BYD2_k127_3283678_0 PFAM type II secretion system protein E K02670 - - 5.085e-206 644.0
BYD2_k127_3283678_1 PFAM type II secretion system protein E K02669,K12203 - - 3.717e-204 637.0
BYD2_k127_3283678_10 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003313 286.0
BYD2_k127_3283678_11 Predicted membrane protein (DUF2238) K08984 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001004 280.0
BYD2_k127_3283678_12 Serine aminopeptidase, S33 K07018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001338 264.0
BYD2_k127_3283678_13 Flavin reductase like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001856 250.0
BYD2_k127_3283678_14 Thioesterase K18700 - 3.1.2.29 0.000000000000000000000000000000000000000000000000000000000000000000001656 238.0
BYD2_k127_3283678_15 dihydrofolate reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000003001 236.0
BYD2_k127_3283678_16 YGGT family K02221 - - 0.000000000000000000000000000000000000000000000000000000000000005932 221.0
BYD2_k127_3283678_17 Uncharacterised protein family (UPF0093) K08973 - - 0.00000000000000000000000000000000000000000000000000000005051 198.0
BYD2_k127_3283678_18 Ferredoxin - - - 0.0000000000000000000000000000000000000000000000004725 179.0
BYD2_k127_3283678_19 transcriptional regulator, Rrf2 family K13771 - - 0.000000000000000000000000000000000000000000003402 168.0
BYD2_k127_3283678_2 THUMP K07444 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002525 539.0
BYD2_k127_3283678_20 Pfam Hemerythrin HHE - - - 0.0000000000000000000000000000000000000000005862 165.0
BYD2_k127_3283678_21 DUF167 K09131 - - 0.00000000000000000000000000000000000005149 144.0
BYD2_k127_3283678_22 Uncharacterized conserved protein (DUF2249) - - - 0.00000000000000000000000000000000001655 136.0
BYD2_k127_3283678_23 lipid binding - - - 0.0000000000000000000000000000001213 128.0
BYD2_k127_3283678_24 Uncharacterized conserved protein (DUF2249) - - - 0.000000000000000001408 87.0
BYD2_k127_3283678_3 PFAM ABC transporter related K01990,K09695 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002549 503.0
BYD2_k127_3283678_4 PFAM ABC-2 type transporter K09694 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 415.0
BYD2_k127_3283678_5 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009781 362.0
BYD2_k127_3283678_6 VanZ like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006951 346.0
BYD2_k127_3283678_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001234 339.0
BYD2_k127_3283678_8 Belongs to the heme-copper respiratory oxidase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007016 343.0
BYD2_k127_3283678_9 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001382 321.0
BYD2_k127_3288904_0 TIGRFAM efflux transporter, RND family, MFP subunit K07798,K15727 - - 4.272e-216 683.0
BYD2_k127_3288904_1 PFAM outer membrane efflux protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 593.0
BYD2_k127_3288904_2 AcrB/AcrD/AcrF family K07787 - - 0.00000000000000000000000000000000000000000000000000000000000001183 216.0
BYD2_k127_3288904_3 - - - - 0.0000000000000000000000000000001245 127.0
BYD2_k127_330946_0 NADH ubiquinone oxidoreductase, subunit G, iron-sulphur binding K00336 - 1.6.5.3 0.0 1065.0
BYD2_k127_330946_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 3.236e-256 792.0
BYD2_k127_330946_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000006231 286.0
BYD2_k127_330946_11 PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit K00334 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000005458 264.0
BYD2_k127_330946_12 Glycosyltransferase family 9 (heptosyltransferase) K02843 - - 0.0000000000000000000000000000000000000000000000000000000000000004421 224.0
BYD2_k127_330946_13 Preprotein translocase SecG subunit K03075 - - 0.0000000000000000000000000000000000000000003395 160.0
BYD2_k127_330946_14 Zinc-finger domain - - - 0.00000000000000000000001983 100.0
BYD2_k127_330946_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 5.053e-256 792.0
BYD2_k127_330946_3 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008575 593.0
BYD2_k127_330946_4 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 543.0
BYD2_k127_330946_5 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 530.0
BYD2_k127_330946_6 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 494.0
BYD2_k127_330946_7 TIGRFAM phosphate ABC transporter, inner membrane subunit PstA K02038 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 467.0
BYD2_k127_330946_8 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 388.0
BYD2_k127_330946_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005897 328.0
BYD2_k127_3336009_0 Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate K03517 - 2.5.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007157 591.0
BYD2_k127_3336009_1 NUDIX domain K08310 - 3.6.1.67 0.0000000000000000000000000000000000000000000000000000000000002026 216.0
BYD2_k127_3336009_2 PFAM guanine-specific ribonuclease N1 and T1 K01167 - 3.1.27.3 0.000000000000000000000000000000000001839 142.0
BYD2_k127_3336009_3 Barstar (barnase inhibitor) - - - 0.0000000000000000000000000000000001716 136.0
BYD2_k127_3336009_4 Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn) K01876 - 6.1.1.12 0.0000000000000000000000000003104 113.0
BYD2_k127_335203_0 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001764 538.0
BYD2_k127_335203_1 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002661 437.0
BYD2_k127_335203_2 Protein of unknown function, DUF480 K09915 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002145 291.0
BYD2_k127_335203_4 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991,K12506 - 2.7.7.60,4.6.1.12 0.0004566 43.0
BYD2_k127_3355008_0 Belongs to the MurCDEF family K03802 - 6.3.2.29,6.3.2.30 0.0 1363.0
BYD2_k127_3355008_1 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K06147 - - 0.0 1274.0
BYD2_k127_3355008_10 Pyridine nucleotide-disulphide oxidoreductase K05297,K12265 - 1.18.1.1 0.0002035 46.0
BYD2_k127_3355008_2 cyanophycin synthetase K03802 - 6.3.2.29,6.3.2.30 0.0 1059.0
BYD2_k127_3355008_3 Asparagine synthase K01953 - 6.3.5.4 0.0 1053.0
BYD2_k127_3355008_4 MltA-interacting protein MipA K07274 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013 499.0
BYD2_k127_3355008_5 Transcriptional regulator, LysR family K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003641 420.0
BYD2_k127_3355008_6 Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001875 272.0
BYD2_k127_3355008_7 Domain of unknown function (DUF1854) - - - 0.000000000000000000000000000000000000000000000000000000000000000724 223.0
BYD2_k127_3355008_8 Belongs to the thioredoxin family K03671,K03672 - 1.8.1.8 0.000000000000000000000000000000000000000000000000000002665 193.0
BYD2_k127_3355008_9 Rubredoxin - - - 0.000000000000000000000000001515 111.0
BYD2_k127_3413646_0 Cytochrome c oxidase subunit K00376 - 1.7.2.4 0.0 1069.0
BYD2_k127_3413646_1 FMN_bind - - - 0.0 1060.0
BYD2_k127_3413646_2 domain, Protein - - - 0.00000000000000000000000000000001508 132.0
BYD2_k127_3413646_3 COG3420 Nitrous oxidase accessory protein K07218 - - 0.0000000000000000000000000000003097 125.0
BYD2_k127_341968_0 Protein of unknown function, DUF269 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000111 239.0
BYD2_k127_341968_1 PFAM GCN5-related N-acetyltransferase K22441 - 2.3.1.57 0.000000000000000000000000000000000000000000000004328 176.0
BYD2_k127_341968_2 NifQ K15790 - - 0.0000000000000000000000000000000000000000008586 165.0
BYD2_k127_341968_3 Ferredoxin III, nif-specific - - - 0.000000000000000000000000000000000000000001535 157.0
BYD2_k127_341968_4 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.00000000000000000000000000000000000000005638 157.0
BYD2_k127_341968_5 Nitrogen fixation protein NifX K02596 - - 0.00000000000000000000003689 99.0
BYD2_k127_341968_6 Rop-like - - - 0.00000000000000000001587 92.0
BYD2_k127_3440093_0 it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction K03656 - 3.6.4.12 0.0 1091.0
BYD2_k127_3440093_1 Diguanylate cyclase - - - 1.701e-276 876.0
BYD2_k127_3440093_2 PFAM CHAD domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 427.0
BYD2_k127_3440093_3 Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation dephosphorylation K09773 - 2.7.11.33,2.7.4.28 0.00000000000000007747 81.0
BYD2_k127_3440093_6 - - - - 0.000134 44.0
BYD2_k127_3481749_0 ATPases associated with a variety of cellular activities K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007037 387.0
BYD2_k127_3481749_1 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001342 294.0
BYD2_k127_3481749_2 - - - - 0.000000000000000000000002956 106.0
BYD2_k127_3488743_0 Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction K03147 - 4.1.99.17 0.0 1200.0
BYD2_k127_3488743_1 PFAM peptidase M3A and M3B thimet oligopeptidase F K01414 - 3.4.24.70 0.0 1054.0
BYD2_k127_3488743_10 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) K02527 - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002769 564.0
BYD2_k127_3488743_11 Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis K00973 - 2.7.7.24 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 505.0
BYD2_k127_3488743_12 heptosyltransferase K12982 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 456.0
BYD2_k127_3488743_13 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008327 415.0
BYD2_k127_3488743_14 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000815 398.0
BYD2_k127_3488743_15 Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose K00067 - 1.1.1.133 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006807 355.0
BYD2_k127_3488743_16 Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose K01790 - 5.1.3.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001567 306.0
BYD2_k127_3488743_17 Ribosomal RNA adenine dimethylase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000214 293.0
BYD2_k127_3488743_18 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000002404 236.0
BYD2_k127_3488743_19 Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose K01711 - 4.2.1.47 0.0000000000000000000000000000000000000000000000000000000000000000002092 231.0
BYD2_k127_3488743_2 Glutamine synthetase, catalytic domain K01915,K20712 GO:0003674,GO:0003824,GO:0006725,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016866,GO:0034022,GO:0042537,GO:0044237,GO:0050486,GO:0071704,GO:1901360 5.4.4.3,6.3.1.2 7.39e-286 880.0
BYD2_k127_3488743_20 Winged helix-turn-helix DNA-binding - - - 0.00000000000000000000000000000000000000000000000000009478 190.0
BYD2_k127_3488743_21 pathogenesis - - - 0.00000000000000000000000000000000000000000000001439 180.0
BYD2_k127_3488743_22 Domain of unknown function (DUF4124) - - - 0.0000000000000000000000000000000000000007406 155.0
BYD2_k127_3488743_23 Pfam Glutaredoxin - - - 0.00000000000000000000000000000000003152 143.0
BYD2_k127_3488743_24 Protein of unknown function (DUF1289) K06938 - - 0.000000000000000006609 86.0
BYD2_k127_3488743_3 Nitrogen metabolism transcriptional regulator, NtrC, Fis Family K07712 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0006355,GO:0008150,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0019219,GO:0019222,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0043565,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:2000112,GO:2000113,GO:2001141 - 6.65e-258 799.0
BYD2_k127_3488743_4 Mannose-6-phosphate isomerase K16011 - 2.7.7.13,5.3.1.8 4.076e-244 761.0
BYD2_k127_3488743_5 Belongs to the NAD(P)-dependent epimerase dehydratase family. dTDP-glucose dehydratase subfamily K01710 - 4.2.1.46 7.574e-204 640.0
BYD2_k127_3488743_6 Amidohydrolase family K01465 - 3.5.2.3 2.652e-203 637.0
BYD2_k127_3488743_7 SMART ATP-binding region ATPase domain protein K07708 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 585.0
BYD2_k127_3488743_8 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000285 578.0
BYD2_k127_3488743_9 TIGRFAM type I secretion outer membrane protein, TolC family K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002464 569.0
BYD2_k127_353248_0 Ring hydroxylating alpha subunit (catalytic domain) K00499 - 1.14.15.7 7.724e-208 662.0
BYD2_k127_353248_1 fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 499.0
BYD2_k127_353248_2 EamA-like transporter family K15270 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003824 369.0
BYD2_k127_353248_3 SpoIIAA-like - - - 0.0000000000000000000000000000000000000000000000000000009301 194.0
BYD2_k127_353248_4 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.000000000000000000000000000000000000000000000000043 180.0
BYD2_k127_353248_5 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000000005645 97.0
BYD2_k127_355198_0 AAA domain - - - 0.0 1122.0
BYD2_k127_355198_1 Belongs to the RtcB family K14415,K18148 - 6.5.1.3 5.857e-217 681.0
BYD2_k127_355198_10 PFAM UspA - - - 0.00000000000000000000000000000000007529 144.0
BYD2_k127_355198_11 - - - - 0.0000000000000000000000007702 108.0
BYD2_k127_355198_12 ABC-type transport auxiliary lipoprotein component K18480 - - 0.000000000000000000000004521 109.0
BYD2_k127_355198_13 - - - - 0.00000000000005415 74.0
BYD2_k127_355198_2 receptor K02014,K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002389 460.0
BYD2_k127_355198_3 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003577 312.0
BYD2_k127_355198_4 EVE domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000134 282.0
BYD2_k127_355198_5 MlaD protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000417 275.0
BYD2_k127_355198_6 Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids K19221 - 2.5.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000004354 246.0
BYD2_k127_355198_7 PFAM Archease protein family (DUF101 UPF0211) K00974 - 2.7.7.72 0.000000000000000000000000000000000000000000000000001418 186.0
BYD2_k127_355198_8 Cell division protein ZapA K09888 - - 0.0000000000000000000000000000000000000000002847 163.0
BYD2_k127_355198_9 - - - - 0.000000000000000000000000000000000000000001382 162.0
BYD2_k127_3552110_0 ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner K01338 - 3.4.21.53 0.0 1407.0
BYD2_k127_3552110_1 Carbohydrate phosphorylase K00688 - 2.4.1.1 0.0 1307.0
BYD2_k127_3552110_2 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 7.509e-234 727.0
BYD2_k127_3552110_3 Starch synthase catalytic domain K00703 - 2.4.1.21 4.393e-202 640.0
BYD2_k127_3552110_4 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 - 3.63e-199 628.0
BYD2_k127_3552110_5 PFAM histone deacetylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008873 463.0
BYD2_k127_3552110_6 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 372.0
BYD2_k127_3552110_7 CoA binding domain K09181 - - 0.000000000000000000000000000000000000000000000000000000000000001684 220.0
BYD2_k127_3552110_8 bacterial (prokaryotic) histone like domain K03530 - - 0.000000000000000000000000000000000000000001746 156.0
BYD2_k127_3552110_9 - - - - 0.00000000000009024 72.0
BYD2_k127_3560836_0 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 6.078e-252 779.0
BYD2_k127_3560836_1 PFAM peptidase U62 modulator of DNA gyrase K03592 - - 2.877e-231 734.0
BYD2_k127_3560836_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001192 484.0
BYD2_k127_3560836_3 May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate K21420 - 2.3.2.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001248 370.0
BYD2_k127_3560836_4 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 - 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002213 329.0
BYD2_k127_3560836_5 Phospholipase/Carboxylesterase K06999 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005207 327.0
BYD2_k127_3560836_6 Protein of unknown function (DUF615) K09889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000007927 243.0
BYD2_k127_3560836_7 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 - - 0.000000000000000000000000000000000000000000000000000000000002881 211.0
BYD2_k127_3560836_8 - - - - 0.000000000000000000000000000000000000000000000000002701 187.0
BYD2_k127_3566078_0 GAF domain K20962 - 3.1.4.52 0.0 1151.0
BYD2_k127_3566078_1 Diguanylate cyclase - - - 7.186e-233 764.0
BYD2_k127_3566078_2 Sulfatase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003698 317.0
BYD2_k127_3566078_3 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001097 276.0
BYD2_k127_3566078_4 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000003833 242.0
BYD2_k127_3566078_5 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000001245 219.0
BYD2_k127_3566078_6 Histidine kinase K11617 - 2.7.13.3 0.0000000000000000000000000000000003002 152.0
BYD2_k127_3566078_8 Domain of unknown function (DUF3362) - - - 0.00002569 47.0
BYD2_k127_3595311_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 1.308e-228 714.0
BYD2_k127_3595311_1 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 4.449e-220 687.0
BYD2_k127_3595311_2 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112 366.0
BYD2_k127_3595311_3 BolA-like protein - - - 0.000000000000846 68.0
BYD2_k127_3595311_5 - - - - 0.0004857 43.0
BYD2_k127_3607534_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 0.0 1391.0
BYD2_k127_3607534_1 metal-dependent phosphohydrolase HD sub domain - - - 3.124e-254 795.0
BYD2_k127_3607534_2 Adenylyl cyclase class-3 4 guanylyl cyclase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004451 599.0
BYD2_k127_3607534_3 SMART beta-lactamase domain protein K01120 - 3.1.4.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002141 405.0
BYD2_k127_3607534_4 TPR repeat - - - 0.00000000000000000000000000000000000000000000000000000000000000000003763 236.0
BYD2_k127_3607534_5 Prokaryotic N-terminal methylation motif K02650 - - 0.0000000000000000000000000000004661 130.0
BYD2_k127_3625620_0 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 - 6.1.1.15 1.216e-318 982.0
BYD2_k127_3625620_1 Peptidase_C39 like family - - - 6.408e-314 1021.0
BYD2_k127_3625620_10 HAD-superfamily hydrolase, subfamily IA, variant 3 K07025 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 347.0
BYD2_k127_3625620_11 Bacterial regulatory proteins, tetR family K05501 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000612 328.0
BYD2_k127_3625620_12 Protein of unknown function (DUF938) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 314.0
BYD2_k127_3625620_13 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001749 306.0
BYD2_k127_3625620_14 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002287 313.0
BYD2_k127_3625620_15 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003551 289.0
BYD2_k127_3625620_16 Uncharacterized protein family, UPF0114 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004077 277.0
BYD2_k127_3625620_17 Chemoreceptor zinc-binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002352 240.0
BYD2_k127_3625620_18 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 - - 0.0000000000000000000000000000000000000000000000000000000002047 205.0
BYD2_k127_3625620_19 Glutathione peroxidase - - - 0.0000000000000000000000000000000000000000000000000000000004311 205.0
BYD2_k127_3625620_2 Belongs to the alpha-IPM synthase homocitrate synthase family K01649 - 2.3.3.13 3.037e-294 907.0
BYD2_k127_3625620_20 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.000000000000000000000000000000000000000000000000000002823 194.0
BYD2_k127_3625620_21 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety K03286,K12976,K16079 - - 0.000000000000000000000000000000000000000002512 164.0
BYD2_k127_3625620_22 Chemoreceptor zinc-binding domain - - - 0.000000000000000000000000000000000000000008793 157.0
BYD2_k127_3625620_23 Copper chaperone PCu(A)C K09796 - - 0.00000000000000000000000000000000001996 141.0
BYD2_k127_3625620_24 Copper chaperone PCu(A)C K09796 - - 0.000000000000000000000000004241 116.0
BYD2_k127_3625620_25 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.000000000000002102 75.0
BYD2_k127_3625620_3 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 1.37e-225 700.0
BYD2_k127_3625620_4 DAHP synthetase I family K03856 - 2.5.1.54 1.848e-212 665.0
BYD2_k127_3625620_5 protein conserved in bacteria K09919 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 586.0
BYD2_k127_3625620_6 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 - 2.7.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 546.0
BYD2_k127_3625620_7 Virulence factor BrkB K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003059 482.0
BYD2_k127_3625620_8 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 398.0
BYD2_k127_3625620_9 NADPH-dependent FMN reductase K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 347.0
BYD2_k127_3696646_0 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008838 587.0
BYD2_k127_3696646_1 MltA specific insert domain K08304 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001958 557.0
BYD2_k127_3696646_10 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.000000008349 65.0
BYD2_k127_3696646_2 TIGRFAM Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 family K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 547.0
BYD2_k127_3696646_3 PFAM AICARFT IMPCHase bienzyme formylation region K00602 - 2.1.2.3,3.5.4.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000254 353.0
BYD2_k127_3696646_4 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007953 323.0
BYD2_k127_3696646_5 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008149 304.0
BYD2_k127_3696646_6 ubiE/COQ5 methyltransferase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000116 258.0
BYD2_k127_3696646_7 ApaG domain K06195 - - 0.0000000000000000000000000000000000000000000000000000024 192.0
BYD2_k127_3696646_8 Rhodanese domain protein - - - 0.00000000000000000000000000000000000000000000322 166.0
BYD2_k127_3696646_9 Bacterial regulatory protein, Fis family K03557 - - 0.00000000000000000000000000000000002572 136.0
BYD2_k127_3725606_0 Domain of unknown function (DUF3400) - - - 0.0 1156.0
BYD2_k127_3725606_1 TIGRFAM phosphate regulon sensor kinase PhoR K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 553.0
BYD2_k127_3725606_2 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002312 432.0
BYD2_k127_3725606_3 Two component transcriptional regulator PhoB, winged helix family K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006943 396.0
BYD2_k127_3725606_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008389 374.0
BYD2_k127_3725606_5 HIT domain - - - 0.0000000000000000000000000000000000000000000000007833 177.0
BYD2_k127_3737488_0 Carbamoyl-phosphate synthetase large chain domain protein K01941 - 6.3.4.6 0.0 1778.0
BYD2_k127_3737488_1 Amidase K01457 - 3.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000007576 248.0
BYD2_k127_3762742_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 0.0 1347.0
BYD2_k127_3762742_1 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1277.0
BYD2_k127_3762742_10 SMART Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain K00134 GO:0000166,GO:0003674,GO:0003824,GO:0004365,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0036094,GO:0043891,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0097159,GO:1901265,GO:1901363 1.2.1.12 5.993e-203 633.0
BYD2_k127_3762742_11 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001341 614.0
BYD2_k127_3762742_12 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000217 555.0
BYD2_k127_3762742_13 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002303 518.0
BYD2_k127_3762742_14 DNA recombination-mediator protein A K04096 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004214 493.0
BYD2_k127_3762742_15 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009003 488.0
BYD2_k127_3762742_16 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000842 432.0
BYD2_k127_3762742_17 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family K03496 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004054 427.0
BYD2_k127_3762742_18 LysM domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003127 420.0
BYD2_k127_3762742_19 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 - 2.1.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008439 380.0
BYD2_k127_3762742_2 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 0.0 1250.0
BYD2_k127_3762742_20 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 371.0
BYD2_k127_3762742_21 ParB-like nuclease domain K03497 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005057 360.0
BYD2_k127_3762742_22 Bacterial regulatory protein, Fis family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001007 304.0
BYD2_k127_3762742_23 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009649 299.0
BYD2_k127_3762742_24 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.0000000000000000000000000000000000000000000000000000000000000000000000000007987 257.0
BYD2_k127_3762742_25 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.0000000000000000000000000000000000000000000000000000000000000000000004308 240.0
BYD2_k127_3762742_26 Protein of unknown function (DUF494) K03747 - - 0.000000000000000000000000000000000000000000000000000000000000001078 221.0
BYD2_k127_3762742_27 Domain of unknown function (DUF4390) - - - 0.00000000000000000000000000000000000000000000000000000002005 204.0
BYD2_k127_3762742_28 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.00000000000000000000000000000000001743 136.0
BYD2_k127_3762742_29 Could be involved in insertion of integral membrane proteins into the membrane K08998 - - 0.000000000000000000000000002276 112.0
BYD2_k127_3762742_3 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 0.0 1069.0
BYD2_k127_3762742_30 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.0000000000000002762 79.0
BYD2_k127_3762742_31 Ribonuclease P K03536 - 3.1.26.5 0.00000000003726 68.0
BYD2_k127_3762742_32 ATP synthase I chain - - - 0.00000001793 61.0
BYD2_k127_3762742_4 histidine kinase HAMP region domain protein - - - 5.574e-273 857.0
BYD2_k127_3762742_5 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 1.262e-258 802.0
BYD2_k127_3762742_6 Belongs to the phosphoglycerate kinase family K00927 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464 2.7.2.3 3.315e-228 710.0
BYD2_k127_3762742_7 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 3.451e-226 712.0
BYD2_k127_3762742_8 TIGRFAM fructose-bisphosphate aldolase, class II, Calvin cycle subtype K01624 - 4.1.2.13 9.674e-223 691.0
BYD2_k127_3762742_9 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 1.353e-222 696.0
BYD2_k127_3826501_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005193 499.0
BYD2_k127_3826501_1 SNARE associated Golgi protein K03975 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001717 316.0
BYD2_k127_3826501_2 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.00000000000000000000000000000000000000000000000000000004525 196.0
BYD2_k127_3898676_0 Major facilitator Superfamily - - - 2.725e-273 849.0
BYD2_k127_3898676_1 Regulator of RNA terminal phosphate cyclase K14414 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006323 595.0
BYD2_k127_3898676_2 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.0000000000000000000000000000000000000000000114 168.0
BYD2_k127_3920670_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006128 411.0
BYD2_k127_3920670_1 General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr) K08483 - 2.7.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005288 307.0
BYD2_k127_3920670_2 addiction module antidote protein - - - 0.000000000000000000000000000000000000000005297 158.0
BYD2_k127_3920670_3 addiction module killer protein - - - 0.00000000000000000000000000000006293 126.0
BYD2_k127_3920670_4 YCII-related domain - - - 0.00000000000000000000000000000008711 126.0
BYD2_k127_3939208_0 Belongs to the pseudouridine synthase RsuA family K06183 - 5.4.99.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001097 411.0
BYD2_k127_3939208_1 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000000002215 182.0
BYD2_k127_3939208_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.0000000000000000000007301 96.0
BYD2_k127_3939208_3 Protein of unknown function (DUF2621) - - - 0.0000006421 59.0
BYD2_k127_3965009_0 SMART von Willebrand factor type A - - - 1.589e-293 920.0
BYD2_k127_3965009_1 PFAM major facilitator superfamily MFS_1 K08218 - - 6.173e-226 705.0
BYD2_k127_3965009_10 Transfers a succinyl group from succinyl-CoA to L- homoserine, forming succinyl-L-homoserine K00641 - 2.3.1.31 0.0000000000000000000000000000000000000000001386 160.0
BYD2_k127_3965009_11 Domain of unknown function (DUF4124) - - - 0.0000000000000000000000000007248 120.0
BYD2_k127_3965009_2 Fructose-1-6-bisphosphatase, N-terminal domain K03841 - 3.1.3.11 1.731e-205 641.0
BYD2_k127_3965009_3 SAICAR synthetase K01923 GO:0003674,GO:0003824,GO:0004639,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000872 512.0
BYD2_k127_3965009_4 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001161 465.0
BYD2_k127_3965009_5 Endonuclease/Exonuclease/phosphatase family K01142 - 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 449.0
BYD2_k127_3965009_6 RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site K01601 - 4.1.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001935 396.0
BYD2_k127_3965009_7 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003943 382.0
BYD2_k127_3965009_8 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004301 327.0
BYD2_k127_3965009_9 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000002964 263.0
BYD2_k127_3975214_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01961 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.3.4.14,6.4.1.2 9.262e-272 839.0
BYD2_k127_3975214_1 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 7.799e-248 779.0
BYD2_k127_3975214_2 NYN domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008343 520.0
BYD2_k127_3975214_3 Ribosomal protein L11 methyltransferase (PrmA) K02687 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003449 464.0
BYD2_k127_3975214_4 The glycine cleavage system catalyzes the degradation of glycine K00605 GO:0001505,GO:0003674,GO:0003824,GO:0004047,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006544,GO:0006546,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0009056,GO:0009063,GO:0009069,GO:0009071,GO:0009987,GO:0016054,GO:0016740,GO:0016741,GO:0017144,GO:0019464,GO:0019752,GO:0032259,GO:0042133,GO:0042135,GO:0042737,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046395,GO:0065007,GO:0065008,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 2.1.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 458.0
BYD2_k127_3975214_5 TIGRFAM DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001039 339.0
BYD2_k127_3975214_6 Protein of unknown function (DUF3426) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001212 253.0
BYD2_k127_3975214_7 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000000000000000000001532 239.0
BYD2_k127_3975214_8 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000000000000000001409 213.0
BYD2_k127_3975214_9 PFAM CutA1 divalent ion tolerance protein K03926 GO:0003674,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0043167,GO:0043169,GO:0044424,GO:0044464,GO:0046872,GO:0046914 - 0.00000000000000000000000000000000004207 146.0
BYD2_k127_4033647_0 PFAM Isocitrate dehydrogenase NADP-dependent monomeric type K00031 - 1.1.1.42 0.0 1319.0
BYD2_k127_4033647_1 heat shock protein binding - - - 3.215e-291 904.0
BYD2_k127_4033647_2 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 8.017e-207 651.0
BYD2_k127_4033647_3 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006549 567.0
BYD2_k127_4033647_4 Cytochrome c7 and related cytochrome c - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 432.0
BYD2_k127_4033647_5 ferredoxin-NADP+ reductase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002989 361.0
BYD2_k127_4033647_6 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009995 296.0
BYD2_k127_4033647_7 SMART Cold shock protein K03704 - - 0.0000000000000000000000000000000000002388 142.0
BYD2_k127_4033647_8 Regulatory protein, FmdB family - - - 0.0000000000000000000000000000000001486 133.0
BYD2_k127_4033647_9 Protein of unknown function (DUF502) - - - 0.000000000000000000062 93.0
BYD2_k127_4037091_0 FtsX-like permease family K02004 - - 5.866e-228 717.0
BYD2_k127_4074505_0 AAA domain K02224 - 6.3.5.11,6.3.5.9 1.151e-234 733.0
BYD2_k127_4074505_1 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 4.64e-207 652.0
BYD2_k127_4074505_2 Polysulphide reductase, NrfD K00185 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 299.0
BYD2_k127_4074505_3 Domain of unknown function DUF302 - - - 0.000000000000000000000000000000000000000000000000003722 187.0
BYD2_k127_4083187_0 Bacterial lipid A biosynthesis acyltransferase K02517,K12974 - 2.3.1.241,2.3.1.242 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001822 511.0
BYD2_k127_4083187_1 Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis K03182 - 4.1.1.98 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000695 378.0
BYD2_k127_4083187_2 Bacterial lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 375.0
BYD2_k127_4161026_0 His Kinase A (phosphoacceptor) domain K07641 - 2.7.13.3 0.0000000000000000000000000000000000000000000000002864 181.0
BYD2_k127_4161026_1 Inner membrane protein CreD K06143 - - 0.0000000000000007758 83.0
BYD2_k127_4161026_2 Inner membrane protein CreD K06143 - - 0.00000005365 56.0
BYD2_k127_421171_0 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.0 1013.0
BYD2_k127_421171_1 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005687 451.0
BYD2_k127_421171_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002062 304.0
BYD2_k127_421171_3 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003035 269.0
BYD2_k127_421171_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 - 1.6.5.3 0.0000000000000000000000000000000000000000000000609 171.0
BYD2_k127_4272639_0 Penicillin-binding protein OB-like domain K05366 - 2.4.1.129,3.4.16.4 0.0 1191.0
BYD2_k127_4272639_1 Delta-aminolevulinic acid dehydratase K01698 GO:0003674,GO:0003824,GO:0004655,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009987,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.2.1.24 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008491 560.0
BYD2_k127_4272639_2 Necessary for normal cell division and for the maintenance of normal septation K03978 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 333.0
BYD2_k127_4272639_3 Aminotransferase class-III K01845 - 5.4.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006054 327.0
BYD2_k127_4272639_4 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002349 272.0
BYD2_k127_4278938_0 General secretory system II protein E domain protein K02454,K02652,K12276 - - 2.024e-320 986.0
BYD2_k127_4278938_1 PFAM Type II secretion system F domain K02653 - - 5.732e-204 642.0
BYD2_k127_4278938_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 545.0
BYD2_k127_4278938_3 Tetratricopeptide repeats - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 308.0
BYD2_k127_4278938_4 - - - - 0.00000000000000000000000000000000000000000000000000000008375 201.0
BYD2_k127_4278938_5 - - - - 0.000000000000000000000000000007541 125.0
BYD2_k127_4278938_6 - - - - 0.0000000000000000000003994 102.0
BYD2_k127_4278938_7 PFAM type II and III secretion system protein K02453 - - 0.0000000000000005485 78.0
BYD2_k127_4309653_0 type II secretion system protein E K02283,K20527 - - 1.923e-209 659.0
BYD2_k127_4309653_1 PFAM MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008204 484.0
BYD2_k127_4309653_2 Putative Flp pilus-assembly TadE/G-like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 471.0
BYD2_k127_4309653_3 pilus assembly protein K02282 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002124 392.0
BYD2_k127_4309653_4 Type II secretion system (T2SS), protein F K12510 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001819 350.0
BYD2_k127_4309653_5 type II secretion system protein K12511 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008475 338.0
BYD2_k127_4309653_6 helix_turn_helix, Lux Regulon K07684 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000153 285.0
BYD2_k127_4309653_7 Histidine kinase K07673 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000002444 276.0
BYD2_k127_4309653_8 TadE-like protein - - - 0.000000000000000000000000000000000000000000000000004392 184.0
BYD2_k127_4309653_9 TadE-like protein - - - 0.00000000000000000000000000000000000000000000005425 173.0
BYD2_k127_4315853_0 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 3.116e-295 913.0
BYD2_k127_4315853_1 PFAM alpha-2-macroglobulin domain protein K06894 - - 6.345e-246 787.0
BYD2_k127_4315853_10 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.000000000000000000000000000000002465 131.0
BYD2_k127_4315853_2 Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA K03438 - 2.1.1.199 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003256 463.0
BYD2_k127_4315853_3 Stage II sporulation protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008451 449.0
BYD2_k127_4315853_4 Uncharacterized protein conserved in bacteria (DUF2135) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005415 333.0
BYD2_k127_4315853_5 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 303.0
BYD2_k127_4315853_6 Uncharacterized protein conserved in bacteria (DUF2135) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 292.0
BYD2_k127_4315853_7 MraZ protein, putative antitoxin-like K03925 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001782 278.0
BYD2_k127_4315853_8 - - - - 0.0000000000000000000000000000000000000000000000000000000000051 213.0
BYD2_k127_4315853_9 Hemerythrin HHE cation binding domain K07216 - - 0.0000000000000000000000000000000000000000000000000006602 187.0
BYD2_k127_4389366_0 - - - - 0.000000000000000000000000000000000000000000000000000000000002837 213.0
BYD2_k127_4389366_1 Could be a 3Fe-4S cluster-containing protein K03855 - - 0.0000000000000000000000000000000000000000000000004899 176.0
BYD2_k127_4389366_2 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000003554 168.0
BYD2_k127_4389366_3 Ferredoxin - - - 0.0000000000000000000000000000000000000007348 156.0
BYD2_k127_4389366_4 FAD dependent oxidoreductase K00313 - - 0.0000000000000000000000005965 104.0
BYD2_k127_4389366_5 - - - - 0.0000000004633 66.0
BYD2_k127_4431019_0 Hydrophobe Amphiphile Efflux-1 (HAE1) Family K18138 - - 0.0 1539.0
BYD2_k127_4431019_1 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT K18139 - - 3.214e-252 783.0
BYD2_k127_4431019_2 nuclease - - - 0.00000000000000000000000000000000000002675 147.0
BYD2_k127_4431019_3 alcohol dehydrogenase K13979 - - 0.000000000003035 77.0
BYD2_k127_444430_0 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 591.0
BYD2_k127_444430_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006381 584.0
BYD2_k127_444430_2 Chorismate mutase type II K01713,K14170 - 4.2.1.51,4.2.1.91,5.4.99.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003603 517.0
BYD2_k127_444430_3 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.000000000000000000000000000000000000000000000000000000000007374 209.0
BYD2_k127_444430_4 NeuB family K03856 - 2.5.1.54 0.000009607 47.0
BYD2_k127_4460730_0 Ami_3 K01448 - 3.5.1.28 2.57e-196 620.0
BYD2_k127_4460730_1 HI0933-like protein K07007 - - 2.936e-194 615.0
BYD2_k127_4460730_2 Domain of unknown function (DUF3458_C) ARM repeats K01256 - 3.4.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005664 604.0
BYD2_k127_4460730_3 Pyridoxal-phosphate dependent enzyme K12339 GO:0000003,GO:0000096,GO:0000097,GO:0000902,GO:0000904,GO:0003006,GO:0003674,GO:0003824,GO:0004124,GO:0005488,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005774,GO:0005777,GO:0005829,GO:0005886,GO:0006082,GO:0006520,GO:0006534,GO:0006535,GO:0006563,GO:0006790,GO:0006807,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009069,GO:0009070,GO:0009507,GO:0009532,GO:0009536,GO:0009566,GO:0009567,GO:0009570,GO:0009653,GO:0009826,GO:0009856,GO:0009860,GO:0009932,GO:0009987,GO:0010035,GO:0010038,GO:0016020,GO:0016043,GO:0016049,GO:0016053,GO:0016740,GO:0016765,GO:0019344,GO:0019752,GO:0019842,GO:0019953,GO:0022414,GO:0030154,GO:0030170,GO:0031090,GO:0032501,GO:0032502,GO:0032989,GO:0036094,GO:0040007,GO:0042221,GO:0042579,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0044706,GO:0046394,GO:0046686,GO:0048037,GO:0048046,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048868,GO:0048869,GO:0050662,GO:0050896,GO:0051704,GO:0060560,GO:0070279,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0098588,GO:0098805,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003869 538.0
BYD2_k127_4460730_4 Pfam Transposase IS66 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 411.0
BYD2_k127_4460730_5 PepSY-associated TM region - - - 0.00000000000000000000000000000000000000000000000000000000000001402 223.0
BYD2_k127_4460730_6 FMN-binding - - - 0.0000000000000000000000000000000000000000000000001973 184.0
BYD2_k127_4460730_7 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.0000000000000000000000000000000000000000000001615 175.0
BYD2_k127_4460730_8 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 - 1.17.99.6 0.000000000000000000000001171 108.0
BYD2_k127_451844_0 ABC-type uncharacterized transport system - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 549.0
BYD2_k127_451844_1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002316 417.0
BYD2_k127_451844_2 Glycosyl transferase family group 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006412 299.0
BYD2_k127_451844_3 ATP-grasp domain - - - 0.000000000000000000000000000000000000000000000001239 186.0
BYD2_k127_451844_4 ABC-2 family transporter protein K01992 - - 0.000000000000000000000000000000000001375 141.0
BYD2_k127_4547835_0 Belongs to the peptidase S41A family K03797 - 3.4.21.102 3.986e-286 893.0
BYD2_k127_4547835_1 Diguanylate cyclase - - - 5.101e-199 631.0
BYD2_k127_4547835_2 COG2201 Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001682 562.0
BYD2_k127_4547835_3 Belongs to the radical SAM superfamily. RlmN family K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004466 508.0
BYD2_k127_4547835_4 Oxidoreductase NAD-binding domain K02613 - - 0.000000000000000000000000000000000000000000000000000003267 210.0
BYD2_k127_4634386_0 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0030145,GO:0034641,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046872,GO:0046914,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 509.0
BYD2_k127_4634386_1 Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity K00765 - 2.4.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 365.0
BYD2_k127_4671691_0 Alpha amylase, C-terminal all-beta domain K00700 - 2.4.1.18 0.0 1211.0
BYD2_k127_4671691_1 Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide K04656 - - 0.0 1097.0
BYD2_k127_4671691_10 acetyltransferases and hydrolases with the alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 413.0
BYD2_k127_4671691_11 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 378.0
BYD2_k127_4671691_12 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002446 290.0
BYD2_k127_4671691_13 Hydrogenase formation hypA family K04654 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001118 243.0
BYD2_k127_4671691_14 PFAM chemotaxis K03406 - - 0.00000000000000000003076 96.0
BYD2_k127_4671691_15 Protein of unknown function (DUF2934) - - - 0.0000000001624 67.0
BYD2_k127_4671691_2 Glycosyl hydrolase family 57 - - - 4.884e-261 814.0
BYD2_k127_4671691_3 MscS Mechanosensitive ion channel - - - 4.749e-238 745.0
BYD2_k127_4671691_4 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 1.48e-227 710.0
BYD2_k127_4671691_5 Phosphoglucose isomerase K01810 - 5.3.1.9 1.89e-211 670.0
BYD2_k127_4671691_6 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004268 586.0
BYD2_k127_4671691_7 AIR synthase related protein, N-terminal domain K04655 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003565 548.0
BYD2_k127_4671691_8 4-alpha-glucanotransferase K00705 - 2.4.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006469 508.0
BYD2_k127_4671691_9 ATP adenylyltransferase (5',5''-P-1,P-4-tetraphosphate phosphorylase II) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 461.0
BYD2_k127_4674225_0 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 GO:0001775,GO:0002376,GO:0003674,GO:0003824,GO:0003883,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006220,GO:0006221,GO:0006241,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009163,GO:0009165,GO:0009199,GO:0009201,GO:0009208,GO:0009209,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0015949,GO:0016874,GO:0016879,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0032943,GO:0034404,GO:0034641,GO:0034654,GO:0042098,GO:0042100,GO:0042110,GO:0042113,GO:0042221,GO:0042455,GO:0042493,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045321,GO:0046036,GO:0046131,GO:0046132,GO:0046134,GO:0046390,GO:0046483,GO:0046649,GO:0046651,GO:0050896,GO:0055086,GO:0070661,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.4.2 1.472e-316 974.0
BYD2_k127_4674225_1 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 1.517e-246 764.0
BYD2_k127_4674225_2 ABC transporter C-terminal domain K15738 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001321 542.0
BYD2_k127_4674225_3 DAHP synthetase I family K01627 - 2.5.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 512.0
BYD2_k127_4674225_4 TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002802 493.0
BYD2_k127_4674225_5 Belongs to the peptidase S11 family K01286,K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003364 316.0
BYD2_k127_4674225_6 Protein of unknown function (DUF3617) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000008525 252.0
BYD2_k127_4706140_0 Ribulose bisphosphate carboxylase large chain, catalytic domain K01601 - 4.1.1.39 1.243e-317 974.0
BYD2_k127_4706140_1 Putative diguanylate phosphodiesterase - - - 3.766e-248 802.0
BYD2_k127_4706140_2 Putative diguanylate phosphodiesterase - - - 1.873e-247 798.0
BYD2_k127_4706140_3 LysR substrate binding domain K21703 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002625 561.0
BYD2_k127_4706140_4 Chemoreceptor zinc-binding domain - - - 0.00000000000000000000000000000000000000000000000001234 184.0
BYD2_k127_4706140_5 - - - - 0.00000000000000000000002404 104.0
BYD2_k127_4722139_0 glutamate synthase K00265,K00284 - 1.4.1.13,1.4.1.14,1.4.7.1 0.0 1366.0
BYD2_k127_4722139_1 Belongs to the dGTPase family. Type 2 subfamily K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004516 576.0
BYD2_k127_4722139_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735,K13829 - 2.7.1.71,4.2.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 576.0
BYD2_k127_4722139_3 PFAM type II and III secretion system protein K02666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002031 568.0
BYD2_k127_4724733_0 ABC transporter, periplasmic molybdate-binding protein K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 363.0
BYD2_k127_4724733_1 MreB/Mbl protein K03569 - - 0.00000000000000000000000000000000000000000000000000000003761 201.0
BYD2_k127_4724733_2 cytidine deaminase activity K01489 - 3.5.4.5 0.00000000000000000000000000000000004182 138.0
BYD2_k127_4724733_3 - - - - 0.0000000000000000000000000000009095 127.0
BYD2_k127_4724733_5 - - - - 0.0000000000000001852 86.0
BYD2_k127_4724733_6 Oxygen-insensitive NAD(P)H nitroreductase Dihydropteridine reductase - - - 0.000000000000002591 76.0
BYD2_k127_4737502_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001277 534.0
BYD2_k127_4737502_1 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275 - 1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009589 516.0
BYD2_k127_4737502_2 MltA-interacting protein MipA K07274 - - 0.0000001598 59.0
BYD2_k127_474154_0 SWIM zinc finger - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001322 310.0
BYD2_k127_474154_1 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000000000000000000000000000000000000000000006295 184.0
BYD2_k127_48276_0 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008986,GO:0009058,GO:0009987,GO:0016051,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016781,GO:0019318,GO:0019319,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046872,GO:0071704,GO:1901576 2.7.9.2 0.0 1100.0
BYD2_k127_48276_1 Threonyl and Alanyl tRNA synthetase second additional domain K01868 - 6.1.1.3 0.0 1035.0
BYD2_k127_48276_10 Ribosomal protein L9, N-terminal domain K02939 - - 0.000000000000000000000000000000000000000000000000000000000000000001195 229.0
BYD2_k127_48276_11 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000000000000000000476 216.0
BYD2_k127_48276_12 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 - - 0.00000000000000000000000000000000000000000000078 166.0
BYD2_k127_48276_13 DNA replication, synthesis of RNA primer K02686 - - 0.0000000000000000000000000000000009045 132.0
BYD2_k127_48276_14 Protein of unknown function (DUF2892) - - - 0.00000000000000000000007774 99.0
BYD2_k127_48276_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K17686 - 3.6.3.54 0.0 1010.0
BYD2_k127_48276_3 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 1.895e-259 803.0
BYD2_k127_48276_4 MacB-like periplasmic core domain K02004 - - 4.294e-202 636.0
BYD2_k127_48276_5 CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) K12340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 543.0
BYD2_k127_48276_6 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006267 507.0
BYD2_k127_48276_7 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 396.0
BYD2_k127_48276_8 cation diffusion facilitator family transporter K16264 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008022 363.0
BYD2_k127_48276_9 Protein of unknown function (DUF3365) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000003271 256.0
BYD2_k127_4862225_0 Histidine kinase - - - 6.236e-270 869.0
BYD2_k127_4862225_1 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006911 636.0
BYD2_k127_4862225_2 NMT1-like family K02051 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002418 322.0
BYD2_k127_4862225_3 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000858 186.0
BYD2_k127_4862225_4 Major facilitator Superfamily - - - 0.00000000000000002588 81.0
BYD2_k127_4862225_5 TPM domain K08988 - - 0.00000000000007345 72.0
BYD2_k127_4862509_0 - - - - 5.281e-301 937.0
BYD2_k127_4862509_1 Thiolase, C-terminal domain K00632 - 2.3.1.16 4.083e-216 675.0
BYD2_k127_4862509_2 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 - 1.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 569.0
BYD2_k127_4862509_3 Evidence 4 Homologs of previously reported genes of - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000917 487.0
BYD2_k127_4862509_4 chlorophyll binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003031 265.0
BYD2_k127_4862509_5 Acyltransferase K00655 - 2.3.1.51 0.0000000000000000000000000000000000000000000000000000000000000000000000000003916 267.0
BYD2_k127_4862509_6 TIGRFAM succinate dehydrogenase, cytochrome b556 subunit K00241 - - 0.0000000000000000000000000000000000000000004696 161.0
BYD2_k127_4862509_8 Putative zinc- or iron-chelating domain - - - 0.000002892 55.0
BYD2_k127_4893381_0 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000169 468.0
BYD2_k127_4893381_1 Plays a role in the regulation of phosphate uptake K02039 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001012 402.0
BYD2_k127_4904954_0 Belongs to the ABC transporter superfamily K02032,K10823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 291.0
BYD2_k127_4904954_1 Belongs to the ABC transporter superfamily K02031 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007426 271.0
BYD2_k127_4904954_2 Phosphate-starvation-inducible E K13256 - - 0.000000000000000000000001344 111.0
BYD2_k127_4904954_3 ABC transporter, permease protein K02034 - - 0.00000000000000000000003415 101.0
BYD2_k127_4912971_0 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001843 382.0
BYD2_k127_4912971_1 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002089 316.0
BYD2_k127_4912971_2 Preprotein translocase subunit K03210 - - 0.0000000000000000000000000000000000000000005302 159.0
BYD2_k127_493119_0 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 0.0 1120.0
BYD2_k127_493119_1 TIGRFAM cytochrome c-type biogenesis protein CcmI K02200 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003399 491.0
BYD2_k127_493119_10 lipoprotein involved in nitrous oxide reduction - - - 0.0000000000000000000000000000000004468 137.0
BYD2_k127_493119_11 - - - - 0.000000000000000000004341 95.0
BYD2_k127_493119_12 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02196 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009898,GO:0015886,GO:0016020,GO:0031224,GO:0031226,GO:0031235,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:0098552,GO:0098562,GO:1901678 - 0.000000000004053 68.0
BYD2_k127_493119_2 ABC-2 family transporter protein K19341 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009619 410.0
BYD2_k127_493119_3 PFAM ABC transporter related K01990,K19340 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000276 325.0
BYD2_k127_493119_4 TIGRFAM periplasmic protein thiol disulphide oxidoreductase DsbE K02199 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006359 275.0
BYD2_k127_493119_5 NosL family K19342 - - 0.0000000000000000000000000000000000000000000000000000000000001114 217.0
BYD2_k127_493119_6 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 - - 0.000000000000000000000000000000000000000000000000000000000008545 210.0
BYD2_k127_493119_7 Cytochrome C biogenesis protein K02200 - - 0.0000000000000000000000000000000000000000000000000000000008098 204.0
BYD2_k127_493119_8 cytochrome - - - 0.00000000000000000000000000000000000001711 148.0
BYD2_k127_493119_9 - - - - 0.0000000000000000000000000000000002059 135.0
BYD2_k127_5046832_0 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 322.0
BYD2_k127_5046832_1 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000000000007078 205.0
BYD2_k127_5046832_2 Aminomethyltransferase folate-binding domain K06980 - - 0.000000000000000000000000000000000000000000001988 167.0
BYD2_k127_5046832_3 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.000000000000000000000000000000000002738 138.0
BYD2_k127_5138890_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.0 1046.0
BYD2_k127_5138890_1 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 1.015e-210 657.0
BYD2_k127_5138890_3 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.000000000001516 67.0
BYD2_k127_5194256_0 ABC transporter transmembrane region K06147 - - 5.578e-275 856.0
BYD2_k127_5194256_1 Major Facilitator Superfamily - - - 4.715e-226 705.0
BYD2_k127_5194256_10 PFAM peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07262 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002069 354.0
BYD2_k127_5194256_11 Transcriptional regulatory protein ompR K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 327.0
BYD2_k127_5194256_12 PFAM NADH Ubiquinone plastoquinone (complex I) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009298 324.0
BYD2_k127_5194256_13 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002004 319.0
BYD2_k127_5194256_14 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000588 308.0
BYD2_k127_5194256_15 haloacid dehalogenase-like hydrolase K07026 - 3.1.3.70 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000108 278.0
BYD2_k127_5194256_16 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000204 245.0
BYD2_k127_5194256_17 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000006549 245.0
BYD2_k127_5194256_18 Tetratricopeptide repeat K12284 - - 0.00000000000000000000000000000000000001599 156.0
BYD2_k127_5194256_19 transmembrane transport - - - 0.0000000000000001379 88.0
BYD2_k127_5194256_2 Predicted membrane protein (DUF2339) - - - 4.685e-207 676.0
BYD2_k127_5194256_20 Phosphoglycerate mutase family K15640 - - 0.000000000000008995 83.0
BYD2_k127_5194256_3 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 595.0
BYD2_k127_5194256_4 glycosyl transferase family 2 K21349 - 2.4.1.268 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006277 543.0
BYD2_k127_5194256_5 transferase activity, transferring glycosyl groups K13693 - 2.4.1.266 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004815 522.0
BYD2_k127_5194256_6 Cation transporter/ATPase, N-terminus K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002112 484.0
BYD2_k127_5194256_7 Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 468.0
BYD2_k127_5194256_8 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003729 443.0
BYD2_k127_5194256_9 His Kinase A (phosphoacceptor) domain K07638 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004323 362.0
BYD2_k127_5218109_0 Dehydrogenase - - - 1.766e-203 640.0
BYD2_k127_5218109_1 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs K05541 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005553 557.0
BYD2_k127_5218109_2 PFAM filamentation induced by cAMP protein Fic - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 472.0
BYD2_k127_5218109_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000002967 231.0
BYD2_k127_5218109_4 Yip1 domain - - - 0.0000000000000000000000000000000005225 151.0
BYD2_k127_5218109_5 Domain of unknown function (DUF3362) - - - 0.00000217 51.0
BYD2_k127_527847_0 tRNA-splicing ligase RtcB K14415 - 6.5.1.3 5.093e-234 730.0
BYD2_k127_527847_1 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002131 573.0
BYD2_k127_527847_2 positive regulation of ATPase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007671 494.0
BYD2_k127_527847_3 Predicted nucleotidyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006182 414.0
BYD2_k127_527847_4 Catalyzes the conversion of 3'-phosphate to a 2',3'- cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps (A) adenylation of the enzyme by ATP K01974 - 6.5.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 396.0
BYD2_k127_527847_5 Regulator of RNA terminal phosphate cyclase K14414 - - 0.00000000000000000000000000000000000000000000000000000000000000000007252 231.0
BYD2_k127_527847_6 - - - - 0.00000000000000000000000005552 111.0
BYD2_k127_5311930_0 Magnesium chelatase, subunit ChlI C-terminal K07391 - - 1.957e-276 854.0
BYD2_k127_5311930_1 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004678 321.0
BYD2_k127_5311930_2 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000000000000000000000000000000000003644 212.0
BYD2_k127_5311930_3 - - - - 0.0000000000000000000000000000000000000000000000000000001633 203.0
BYD2_k127_5311930_4 Ammonium Transporter Family K03320 - - 0.00000000000000000000000000000000000000000000000001539 184.0
BYD2_k127_5311930_5 Membrane fusogenic activity K09806 - - 0.00000000000000000000003215 100.0
BYD2_k127_5332732_0 PFAM cell divisionFtsK SpoIIIE K03466 - - 2.543e-314 974.0
BYD2_k127_5332732_1 PFAM ATP-binding region ATPase domain protein - - - 2.477e-196 630.0
BYD2_k127_5332732_2 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 289.0
BYD2_k127_5332732_3 PFAM electron transport protein SCO1 SenC K07152 - - 0.000000000000000000000000000000000000000000000000000000000000000001054 230.0
BYD2_k127_5356989_0 PFAM type II secretion system protein E K02670 - - 3.117e-221 694.0
BYD2_k127_5356989_1 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 455.0
BYD2_k127_5356989_10 Tfp pilus assembly protein FimV - - - 0.00002967 53.0
BYD2_k127_5356989_2 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009964 439.0
BYD2_k127_5356989_3 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 418.0
BYD2_k127_5356989_4 PFAM nitroreductase K09019 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 285.0
BYD2_k127_5356989_5 Tellurite resistance protein TehB - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005489 281.0
BYD2_k127_5356989_6 Domain of unknown function (DUF1853) K09977 - - 0.0000000000000000000000000000000000000000000000001315 190.0
BYD2_k127_5356989_7 - - - - 0.0000000000000000000000000002434 118.0
BYD2_k127_5367023_0 PFAM ATP-binding region ATPase domain protein K15011 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000021 541.0
BYD2_k127_5367023_1 TonB-dependent Receptor Plug Domain K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007109 490.0
BYD2_k127_5367023_2 PFAM aminotransferase class IV K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 447.0
BYD2_k127_5367023_3 PFAM peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 K07258 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004618 443.0
BYD2_k127_5367023_4 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 317.0
BYD2_k127_5367023_5 Bacterial regulatory protein, Fis family K15012 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001966 274.0
BYD2_k127_5367023_6 - - - - 0.0000000000000000000000000000000000000000000009957 170.0
BYD2_k127_5367023_7 Protein of unknown function (DUF493) K09158 - - 0.0000000000000000000000002577 109.0
BYD2_k127_5367023_8 fatty acid desaturase K00507 - 1.14.19.1 0.000000000000000001932 85.0
BYD2_k127_5383826_0 Belongs to the NifD NifK NifE NifN family K02592 - - 3.716e-199 629.0
BYD2_k127_5383826_1 Nitrogenase component 1 type Oxidoreductase K02587 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 466.0
BYD2_k127_5384455_0 2-oxoglutarate dehydrogenase N-terminus K00164 - 1.2.4.2 0.0 1474.0
BYD2_k127_5384455_1 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000216 368.0
BYD2_k127_5384455_2 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000005685 166.0
BYD2_k127_5419359_0 Nitrogenase cofactor biosynthesis protein NifB K02585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001374 492.0
BYD2_k127_5419359_1 LRV protein FeS4 cluster - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001555 258.0
BYD2_k127_5419359_2 Belongs to the HesB IscA family - - - 0.000000000000000000000000000000000000000006141 157.0
BYD2_k127_5419359_3 NifZ domain K02597 - - 0.00000000000000000000000000000000000832 138.0
BYD2_k127_5419359_4 4Fe-4S binding domain - - - 0.00000000000000000000000000000004576 129.0
BYD2_k127_5419359_5 NifZ domain K02597 - - 0.00000000000000000000000005774 109.0
BYD2_k127_5424867_0 B3/4 domain K01890 - 6.1.1.20 0.0 1210.0
BYD2_k127_5424867_1 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 - 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 603.0
BYD2_k127_5424867_10 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 308.0
BYD2_k127_5424867_11 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 300.0
BYD2_k127_5424867_12 Lysin motif K06194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001041 288.0
BYD2_k127_5424867_13 SMART PDZ DHR GLGF domain protein K11749 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001044 256.0
BYD2_k127_5424867_14 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000000000000000005102 205.0
BYD2_k127_5424867_15 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 - - 0.000000000000000000000000000000000000000000000000000005321 190.0
BYD2_k127_5424867_16 helix_turn_helix, mercury resistance - - - 0.00000000000000000000000000000000000000000000003427 172.0
BYD2_k127_5424867_17 - - - - 0.000000000000000006745 89.0
BYD2_k127_5424867_2 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 600.0
BYD2_k127_5424867_3 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 467.0
BYD2_k127_5424867_4 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 - 3.1.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 432.0
BYD2_k127_5424867_5 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002859 418.0
BYD2_k127_5424867_6 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000568 417.0
BYD2_k127_5424867_7 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 402.0
BYD2_k127_5424867_8 Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids K00806 - 2.5.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009365 402.0
BYD2_k127_5424867_9 Cytidylyltransferase family K00981 - 2.7.7.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 356.0
BYD2_k127_5492794_0 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 0.0 1124.0
BYD2_k127_5492794_1 Anthranilate synthase component I domain protein K01665,K13950 - 2.6.1.85 2.894e-204 644.0
BYD2_k127_5492794_2 Domain of unknown function (DUF1732) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002713 408.0
BYD2_k127_5492794_3 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 - 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006844 342.0
BYD2_k127_5492794_4 SMART protein phosphatase 2C domain protein K20074 - 3.1.3.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006144 324.0
BYD2_k127_5492794_5 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 316.0
BYD2_k127_5492794_6 PFAM 20S proteasome, A and B subunits K01419 - 3.4.25.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000655 308.0
BYD2_k127_5492794_7 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000471 284.0
BYD2_k127_5492794_8 translation initiation factor activity - - - 0.00000000000000000000000000000000003952 138.0
BYD2_k127_5492794_9 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.000000000000000000000000000001024 127.0
BYD2_k127_5498_0 PFAM alpha-2-macroglobulin domain protein K06894 - - 6.057e-260 820.0
BYD2_k127_5498_1 Uncharacterized protein conserved in bacteria (DUF2138) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 400.0
BYD2_k127_5498_2 Ppx/GppA phosphatase family K01524 - 3.6.1.11,3.6.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006054 273.0
BYD2_k127_5498_3 Protein of unknown function (DUF1175) K09934 - - 0.000000000000000000000000000000000000000000000000000000000002657 215.0
BYD2_k127_5520331_0 serine threonine protein kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000001812 278.0
BYD2_k127_5521401_0 PFAM FAD dependent oxidoreductase K00111 - 1.1.5.3 8.43e-222 698.0
BYD2_k127_5521401_1 MacB-like periplasmic core domain K02004 - - 2.833e-220 687.0
BYD2_k127_5521401_10 - - - - 0.00000000000000000000000000000000000000000003628 166.0
BYD2_k127_5521401_11 - - - - 0.00000000000000000000000000000000000000006916 153.0
BYD2_k127_5521401_12 - - - - 0.00000000000000000000000000000000000000007605 155.0
BYD2_k127_5521401_13 Uncharacterized protein conserved in bacteria (DUF2331) - - - 0.0000000000000000000000000000000000001002 145.0
BYD2_k127_5521401_2 MacB-like periplasmic core domain K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001107 603.0
BYD2_k127_5521401_3 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 538.0
BYD2_k127_5521401_4 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007317 501.0
BYD2_k127_5521401_5 Alpha/beta hydrolase family K03928 - 3.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 446.0
BYD2_k127_5521401_6 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006434 376.0
BYD2_k127_5521401_7 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003325 331.0
BYD2_k127_5521401_8 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003207 285.0
BYD2_k127_5521401_9 Protein of unknown function (DUF3530) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001486 275.0
BYD2_k127_5529347_0 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism K00990 - 2.7.7.59 0.0 1308.0
BYD2_k127_5529347_1 Abc transporter K06147 - - 0.0 1030.0
BYD2_k127_5529347_10 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000152 389.0
BYD2_k127_5529347_11 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 376.0
BYD2_k127_5529347_12 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002288 256.0
BYD2_k127_5529347_13 ABC-type phosphate transport system, periplasmic component - - - 0.0000000000000000000000000000000003446 136.0
BYD2_k127_5529347_15 - - - - 0.000000001039 63.0
BYD2_k127_5529347_2 protein synthesis factor, GTP-binding K06207 - - 2.534e-315 973.0
BYD2_k127_5529347_3 Belongs to the peptidase S16 family - - - 1.039e-248 791.0
BYD2_k127_5529347_4 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 1.373e-225 724.0
BYD2_k127_5529347_5 PFAM DEAD DEAH box helicase domain protein - GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008026,GO:0008104,GO:0008150,GO:0008186,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032991,GO:0033036,GO:0035770,GO:0036464,GO:0042623,GO:0043186,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044424,GO:0044444,GO:0044464,GO:0045495,GO:0051179,GO:0060293,GO:0070035,GO:0140098,GO:1990904 - 1.37e-223 704.0
BYD2_k127_5529347_6 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 512.0
BYD2_k127_5529347_7 Metallopeptidase family M24 K01265 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008233,GO:0008235,GO:0008237,GO:0008238,GO:0009987,GO:0016787,GO:0019538,GO:0036211,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0070006,GO:0070011,GO:0070084,GO:0071704,GO:0140096,GO:1901564 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000532 488.0
BYD2_k127_5529347_8 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002171 452.0
BYD2_k127_5529347_9 RmuC family K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002237 407.0
BYD2_k127_5549801_0 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 - 5.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 539.0
BYD2_k127_5549801_1 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 415.0
BYD2_k127_5571694_0 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.0 1290.0
BYD2_k127_5571694_1 Flavin containing amine oxidoreductase K21677 - 1.17.8.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001031 552.0
BYD2_k127_5571694_11 - - - - 0.00000000000000001139 85.0
BYD2_k127_5571694_2 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001657 464.0
BYD2_k127_5571694_3 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 - 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002046 439.0
BYD2_k127_5571694_4 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 434.0
BYD2_k127_5571694_5 Squalene/phytoene synthase K02291 - 2.5.1.32,2.5.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 405.0
BYD2_k127_5571694_6 ATPase MipZ K03496 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 384.0
BYD2_k127_5571694_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000006647 229.0
BYD2_k127_5571694_8 diguanylate cyclase - - - 0.000000000000000000000000000000000000000001576 168.0
BYD2_k127_5571694_9 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 0.000000000000000000001052 94.0
BYD2_k127_5581691_0 HI0933-like protein K07007 - - 3.073e-194 612.0
BYD2_k127_5581691_1 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease K02342 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002895 383.0
BYD2_k127_5581691_2 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002668 349.0
BYD2_k127_5581691_3 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 302.0
BYD2_k127_5581691_4 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03469 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001596 276.0
BYD2_k127_5581691_5 Transcriptional regulator, AbiEi antitoxin - - - 0.000000000000000000000000000000000000000000000000004359 185.0
BYD2_k127_5581691_6 Transcriptional regulator, AbiEi antitoxin - - - 0.00000000000000000007259 89.0
BYD2_k127_5591991_0 Transposase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003956 511.0
BYD2_k127_5591991_1 Glycosyl transferase family, helical bundle domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001343 452.0
BYD2_k127_5591991_2 Rieske-like [2Fe-2S] domain K05710 - - 0.0000000000000000000000000000000000000000000000000002252 185.0
BYD2_k127_5591991_3 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000002224 116.0
BYD2_k127_5604570_0 Part of a membrane complex involved in electron transport K03617 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005573 265.0
BYD2_k127_5604570_1 Domain of unknown function (DUF4149) - - - 0.0000000000000000000000000000000000002526 148.0
BYD2_k127_5604570_2 Prolyl oligopeptidase family - - - 0.00000000000000000234 98.0
BYD2_k127_5607854_0 V-type proton ATPase subunit E K02121 - - 0.000000000000000000000000000000000000000000000003074 182.0
BYD2_k127_5607854_1 ATP synthase subunit C K02124 - - 0.0000000000000000000000000000000000001253 144.0
BYD2_k127_5607854_2 ATP synthase (F/14-kDa) subunit - - - 0.0000000000000000000000000006068 120.0
BYD2_k127_5607872_0 Fatty acid hydroxylase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004818 424.0
BYD2_k127_5607872_1 Protein tyrosine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007893 392.0
BYD2_k127_5607872_2 glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009238 331.0
BYD2_k127_5607872_3 - - - - 0.00000000000000000000000000000000000000000000000000294 183.0
BYD2_k127_5607872_4 Chemoreceptor zinc-binding domain - - - 0.0000000000000000000000000000000000000000000000007446 179.0
BYD2_k127_5607872_5 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.00003401 48.0
BYD2_k127_5635523_0 Belongs to the UPF0061 (SELO) family - - - 1.779e-242 756.0
BYD2_k127_5635523_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 338.0
BYD2_k127_5635523_2 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000474 318.0
BYD2_k127_5635523_3 Ribonucleotide reductase subunit alpha - - - 0.000000000000000000000000000000000000000002988 158.0
BYD2_k127_5635523_4 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000111 154.0
BYD2_k127_5635523_5 - - - - 0.000000000000000000000000000001606 125.0
BYD2_k127_5635523_6 - - - - 0.000000000000000000002283 95.0
BYD2_k127_5795522_0 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 - 6.2.1.5 3.793e-204 643.0
BYD2_k127_5795522_1 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0003674,GO:0003824,GO:0004774,GO:0004776,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005759,GO:0016874,GO:0016877,GO:0016878,GO:0031974,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0070013 6.2.1.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 567.0
BYD2_k127_5795522_2 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002576 324.0
BYD2_k127_5795522_3 Universal stress protein family - - - 0.0000000000000000000000000000000000000000000000000000000000001217 214.0
BYD2_k127_5795522_4 serine threonine protein kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000002452 188.0
BYD2_k127_5859393_0 PFAM CHASE2 domain - - - 2.223e-248 778.0
BYD2_k127_5859393_1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002081 471.0
BYD2_k127_5859393_10 Uncharacterized ACR, COG1430 K09005 - - 0.000000000000000000000000000000003278 137.0
BYD2_k127_5859393_2 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001906 380.0
BYD2_k127_5859393_3 Bacterial protein of unknown function (DUF898) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 332.0
BYD2_k127_5859393_4 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007646 319.0
BYD2_k127_5859393_5 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006778 272.0
BYD2_k127_5859393_6 phenylacetate-CoA ligase activity - - - 0.0000000000000000000000000000000000000000000000000000000003829 208.0
BYD2_k127_5859393_7 PFAM AMMECR1 domain protein - - - 0.000000000000000000000000000000000000000000000000000000005494 205.0
BYD2_k127_5859393_8 Bacterial SH3 domain - - - 0.0000000000000000000000000000000000000000000000000001182 190.0
BYD2_k127_5859393_9 VanZ like family - - - 0.00000000000000000000000000000000000005902 150.0
BYD2_k127_5894995_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 1.236e-274 850.0
BYD2_k127_5894995_1 Polyphosphate kinase 2 (PPK2) - - - 1.193e-252 787.0
BYD2_k127_5894995_2 phosphohistidine phosphatase K08296 - - 0.0000000000000000000000000000000000000000000006662 170.0
BYD2_k127_5894995_3 Protein of unknown function (DUF2288) - - - 0.00000000000000000000000000000005312 127.0
BYD2_k127_5894995_5 - - - - 0.0000000000000000000000377 106.0
BYD2_k127_5903947_0 DNA polymerase alpha chain like domain K07053 GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0030145,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914,GO:0097657 3.1.3.97 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 473.0
BYD2_k127_5903947_1 Peptidase family M50 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001081 334.0
BYD2_k127_5903947_2 TIGRFAM Sua5 YciO YrdC YwlC family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003504 312.0
BYD2_k127_5903947_3 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008889 289.0
BYD2_k127_5903947_4 the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA K03664 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004954 256.0
BYD2_k127_5903947_5 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000000003442 216.0
BYD2_k127_5903947_6 Copper resistance protein D - - - 0.0000000000000000000000000000000000000000000000000000004062 196.0
BYD2_k127_5903947_7 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.00000000000000000000000000000000000000000000006296 170.0
BYD2_k127_5903947_8 Belongs to the UPF0125 (RnfH) family K09801 - - 0.0000000000000000000000000000000000000001603 151.0
BYD2_k127_5914069_0 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000007756 252.0
BYD2_k127_5914069_1 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000001793 208.0
BYD2_k127_5914069_2 Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides K11065 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000004201 192.0
BYD2_k127_5914069_3 Cyclic nucleotide-monophosphate binding domain - - - 0.0000000000000000000000000000000000000000000001224 171.0
BYD2_k127_5914069_4 - - - - 0.000000000000000000000000000000000000001481 151.0
BYD2_k127_6014982_0 UvrD-like helicase C-terminal domain K03657 - 3.6.4.12 0.0 1206.0
BYD2_k127_6014982_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 2.213e-312 961.0
BYD2_k127_6014982_11 Hemerythrin HHE cation binding domain - - - 0.000000000000000000000000000000002932 135.0
BYD2_k127_6014982_12 Protein of unknown function (DUF2782) - - - 0.000000000000000000000000000000004862 131.0
BYD2_k127_6014982_2 Phosphoribulokinase / Uridine kinase family K00855 - 2.7.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000735 545.0
BYD2_k127_6014982_3 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 549.0
BYD2_k127_6014982_4 Belongs to the pseudomonas-type ThrB family K02204 - 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 481.0
BYD2_k127_6014982_5 Possible lysine decarboxylase K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002214 430.0
BYD2_k127_6014982_6 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003951 424.0
BYD2_k127_6014982_7 - - - - 0.00000000000000000000000000000000000000000000000000000000659 207.0
BYD2_k127_6014982_8 MEKHLA domain - - - 0.000000000000000000000000000000000000000000000003448 177.0
BYD2_k127_6014982_9 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000004833 168.0
BYD2_k127_6077003_0 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 - 6.1.1.5 0.0 1120.0
BYD2_k127_6077003_1 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004534 307.0
BYD2_k127_6102129_0 Putative metallopeptidase domain - - - 5.259e-210 661.0
BYD2_k127_6102129_1 associated with various cellular activities - - - 1.71e-209 655.0
BYD2_k127_6102129_2 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 496.0
BYD2_k127_6102129_3 AsmA family K07289 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004338 388.0
BYD2_k127_6102129_4 WLM domain K07043 - - 0.00000000000000000000000000000000000000000000000000000000000000000000006012 244.0
BYD2_k127_6102129_5 Acyl-CoA dehydrogenase, N-terminal domain K06445 - - 0.0000001686 54.0
BYD2_k127_6142030_0 Nitrite and sulphite reductase 4Fe-4S domain K11180 - 1.8.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003348 525.0
BYD2_k127_6142030_1 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003309 382.0
BYD2_k127_6142030_2 - - - - 0.000000000000000000000000000000000000000000000000000000000001385 215.0
BYD2_k127_6142030_3 DsrC like protein K11179 - - 0.000000000000000000000000000000000000000000000000000002435 192.0
BYD2_k127_6142030_4 Cas6 Crispr - - - 0.0000000000000000000000000000000000000000008336 164.0
BYD2_k127_6142030_5 - - - - 0.000000000000000000000001816 104.0
BYD2_k127_6171921_0 Belongs to the AlaDH PNT family K00259 - 1.4.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003075 359.0
BYD2_k127_6171921_1 efflux system - - - 0.0000000000000000000000000000000000000000000000000000000000000000003195 234.0
BYD2_k127_6171921_2 Phytanoyl-CoA dioxygenase (PhyH) - - - 0.00000000000000000000000000000000000000000000000000000000000001203 224.0
BYD2_k127_6171921_3 YCII-related domain - - - 0.000000000000000000000000000000000000000000000000000000000001669 211.0
BYD2_k127_6171921_4 L,D-transpeptidase catalytic domain - - - 0.00000000000000000000000000000000000000000000000009402 183.0
BYD2_k127_6177252_0 Mur ligase family, catalytic domain K01924 - 6.3.2.8 2.298e-237 746.0
BYD2_k127_6177252_1 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 3.514e-203 644.0
BYD2_k127_6177252_2 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 2.035e-201 636.0
BYD2_k127_6177252_3 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 7.792e-199 623.0
BYD2_k127_6177252_4 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 585.0
BYD2_k127_6177252_5 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929,K15792 - 6.3.2.10,6.3.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001297 562.0
BYD2_k127_6177252_6 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 512.0
BYD2_k127_6177252_7 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain K00075 - 1.3.1.98 0.00000000000000000000000000000006005 126.0
BYD2_k127_6186799_0 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 1.577e-201 631.0
BYD2_k127_6186799_1 pilus assembly protein FimV K08086 - - 3.035e-201 659.0
BYD2_k127_6186799_2 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 1.463e-198 622.0
BYD2_k127_6186799_3 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 - 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 407.0
BYD2_k127_6186799_4 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000154 329.0
BYD2_k127_6186799_5 Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates - - - 0.000000000000000000000000000000000000000000000000000000005776 206.0
BYD2_k127_6192815_0 LysM domain K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008191 491.0
BYD2_k127_6192815_1 TIGRFAM oligopeptide dipeptide ABC transporter, ATPase subunit K02031,K02032 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001036 241.0
BYD2_k127_6203215_0 Acyl-CoA dehydrogenase, N-terminal domain K06445 - - 0.0 1262.0
BYD2_k127_6203215_1 Enoyl-CoA hydratase/isomerase K07516 - 1.1.1.35 0.0 1091.0
BYD2_k127_6203215_2 AMP-binding enzyme K01897 - 6.2.1.3 6.462e-258 807.0
BYD2_k127_6203215_3 Outer membrane protein transport protein (OMPP1/FadL/TodX) K06076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005226 416.0
BYD2_k127_6203215_4 PFAM thioesterase superfamily protein K10806 - - 0.00000000000000000000000000000000000000000000000000000000001973 208.0
BYD2_k127_6203758_0 PFAM Glutamyl glutaminyl-tRNA synthetase, class Ic, catalytic domain K01886 - 6.1.1.18 0.0 1018.0
BYD2_k127_6203758_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 1.895e-249 774.0
BYD2_k127_6203758_10 general secretion pathway protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000006021 244.0
BYD2_k127_6203758_11 Staphylococcal nuclease homologues K01174 - 3.1.31.1 0.000000000000000000000000000000000000000000000000000000000000008182 225.0
BYD2_k127_6203758_12 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.00000000000000000000000000000000000000000000000000000000000005706 219.0
BYD2_k127_6203758_13 Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) K01095 - 3.1.3.27 0.00000000000000000000000000000000000000000000000000000003252 200.0
BYD2_k127_6203758_14 - - - - 0.0000000000000000000000000000000000000000000000000008704 194.0
BYD2_k127_6203758_15 membrane - - - 0.00000000000000000000000000000000000000000000003272 172.0
BYD2_k127_6203758_2 PFAM ErfK YbiS YcfS YnhG family protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009406 548.0
BYD2_k127_6203758_3 membrane protein, terc K05794 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001362 520.0
BYD2_k127_6203758_4 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 - 2.7.4.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006078 422.0
BYD2_k127_6203758_5 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002166 393.0
BYD2_k127_6203758_6 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004454 354.0
BYD2_k127_6203758_7 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005845 322.0
BYD2_k127_6203758_8 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003219 271.0
BYD2_k127_6203758_9 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.00000000000000000000000000000000000000000000000000000000000000000000000001992 252.0
BYD2_k127_6258541_0 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003835 597.0
BYD2_k127_6258541_1 Phosphatidate cytidylyltransferase K00981 - 2.7.7.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001202 400.0
BYD2_k127_6258541_2 Phosphate acyltransferases - - - 0.00000000000000000000000000000000000000000000000000000000000000000008738 250.0
BYD2_k127_6258541_3 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000002771 214.0
BYD2_k127_6258541_4 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000001273 215.0
BYD2_k127_6273806_0 cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 1.827e-235 734.0
BYD2_k127_6273806_1 - - - - 0.000000000000000000000000000136 117.0
BYD2_k127_6273806_2 Copper binding periplasmic protein CusF - - - 0.000000000000000000000002057 106.0
BYD2_k127_6273806_3 membrane protein (DUF2078) K08982 - - 0.0000000000000001258 84.0
BYD2_k127_6348968_0 Cysteine-rich domain - - - 3.263e-230 720.0
BYD2_k127_6348968_1 Polysaccharide deacetylase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009801 501.0
BYD2_k127_6348968_2 3-beta hydroxysteroid dehydrogenase/isomerase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002387 346.0
BYD2_k127_6348968_3 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000316 276.0
BYD2_k127_6348968_4 Rubrerythrin - - - 0.00000000000000003207 81.0
BYD2_k127_6478821_0 GAF domain K07673 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003447 581.0
BYD2_k127_6478821_1 Major Facilitator Superfamily K02575 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007229 406.0
BYD2_k127_6478821_2 helix_turn_helix, Lux Regulon K07684 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000972 286.0
BYD2_k127_6503114_0 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 1.863e-300 951.0
BYD2_k127_6503114_1 Helicase associated domain (HA2) Add an annotation K03578 - 3.6.4.13 4.672e-278 864.0
BYD2_k127_6503114_10 TIGRFAM 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family K03270 - 3.1.3.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008232 301.0
BYD2_k127_6503114_11 PFAM Heptaprenyl diphosphate synthase component I K00805 - 2.5.1.30 0.00000000000000000000000000000000000000000000000000000000000000000000000000001284 264.0
BYD2_k127_6503114_12 Prokaryotic N-terminal methylation motif - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001023 258.0
BYD2_k127_6503114_13 PFAM phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 K02806 - - 0.000000000000000000000000000000000000000000000000000000000000000000001532 239.0
BYD2_k127_6503114_14 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.0000000000000000000000000000000000000000000000000000000000000007658 227.0
BYD2_k127_6503114_15 NusG domain II - - - 0.0000000000000000000000000000000000000000000000000000002217 199.0
BYD2_k127_6503114_16 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane K09774 - - 0.000000000000000000000000000000000000000000000000000003096 197.0
BYD2_k127_6503114_17 PFAM sigma 54 modulation protein ribosomal protein S30EA K05808 - - 0.00000000000000000000000000000000000000000000000000001338 189.0
BYD2_k127_6503114_18 - - - - 0.0000000000000000000000000000006137 130.0
BYD2_k127_6503114_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 - - 1.145e-229 719.0
BYD2_k127_6503114_3 PhoQ Sensor - - - 2.447e-197 629.0
BYD2_k127_6503114_4 Belongs to the SIS family. GutQ KpsF subfamily K06041 - 5.3.1.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 521.0
BYD2_k127_6503114_5 Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr) K06023 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002786 501.0
BYD2_k127_6503114_6 ABC transporter K06861 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 437.0
BYD2_k127_6503114_7 P-loop ATPase protein family K06958 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001227 433.0
BYD2_k127_6503114_8 Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3- polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN K03186 - 2.5.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003563 370.0
BYD2_k127_6503114_9 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004284 348.0
BYD2_k127_6532518_0 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002177 513.0
BYD2_k127_6532518_1 DEAD DEAH box helicase domain protein K03654 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000004817 220.0
BYD2_k127_6532518_2 Phosphoglucomutase phosphomannomutase alpha beta alpha domain I K01835 - 5.4.2.2 0.00000000000003474 73.0
BYD2_k127_6544013_0 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 - - 2.397e-265 821.0
BYD2_k127_6544013_1 PFAM tRNA synthetase class II (G H P and S) K01892 - 6.1.1.21 2.392e-231 720.0
BYD2_k127_6544013_10 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000000001127 147.0
BYD2_k127_6544013_2 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 3.698e-229 714.0
BYD2_k127_6544013_3 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 3.065e-201 629.0
BYD2_k127_6544013_4 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009717 456.0
BYD2_k127_6544013_5 TIGRFAM type IV pilus biogenesis stability protein PilW K02656 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002592 289.0
BYD2_k127_6544013_6 Tetratricopeptide repeat-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003774 283.0
BYD2_k127_6544013_7 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 - 2.7.4.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000005076 263.0
BYD2_k127_6544013_8 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.0000000000000000000000000000000000000000000000000000000000000000004257 229.0
BYD2_k127_6544013_9 Helix-turn-helix domain K15539 - - 0.00000000000000000000000000000000000000000000000009328 188.0
BYD2_k127_6550732_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 3.645e-201 640.0
BYD2_k127_6565721_0 Chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB K04044 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 3.232e-317 979.0
BYD2_k127_6565721_1 A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters K04488 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003402 247.0
BYD2_k127_6565721_2 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001776 244.0
BYD2_k127_6565721_3 Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA K04082 - - 0.0000000000000000000000000000000000000000000000000000000000000000001668 233.0
BYD2_k127_6565721_4 TIGRFAM ferredoxin, 2Fe-2S type, ISC system K04755 - - 0.0000000000000000000000000000000000000000000000000000000005277 202.0
BYD2_k127_6565721_5 TIGRFAM iron-sulfur cluster assembly protein IscA K13628 - - 0.00000000000000000000000000000000000000000000000000001773 190.0
BYD2_k127_6565721_6 Iron-sulphur cluster assembly - - - 0.0000000000000000000000000002607 118.0
BYD2_k127_6626787_0 PFAM polysaccharide biosynthesis protein CapD - - - 1.066e-295 918.0
BYD2_k127_6626787_1 Male sterility protein K00091,K01784 - 1.1.1.219,5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001076 430.0
BYD2_k127_6626787_2 PFAM Glycosyl transferase, family 4, conserved region K13007 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003923 421.0
BYD2_k127_6626787_3 Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006973 322.0
BYD2_k127_6626787_4 Glycosyl transferase group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003763 301.0
BYD2_k127_6626787_5 Glycosyltransferase like family 2 - - - 0.00000000000000000000000001007 112.0
BYD2_k127_6634896_0 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 - - 2.85e-268 834.0
BYD2_k127_6634896_1 Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group K02227 - 6.3.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004437 449.0
BYD2_k127_6634896_2 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000294 273.0
BYD2_k127_6634896_3 PFAM aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003926 272.0
BYD2_k127_6634896_4 Nodulation protein S (NodS) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000336 271.0
BYD2_k127_6634896_5 Thioredoxin K05838 - - 0.00000000000000000000000000000000000000000000000000000006239 197.0
BYD2_k127_6634896_6 Binds directly to 16S ribosomal RNA K02968 - - 0.0000000000000000000000000000000003521 137.0
BYD2_k127_6659779_0 TIGRFAM ATP-dependent Clp protease ATP-binding subunit clpA K03694 - - 0.0 1174.0
BYD2_k127_6659779_1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 5.627e-314 968.0
BYD2_k127_6659779_10 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 GO:0000725,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008047,GO:0008150,GO:0008152,GO:0009432,GO:0009605,GO:0009987,GO:0009991,GO:0030234,GO:0031668,GO:0033554,GO:0034641,GO:0042802,GO:0043085,GO:0043170,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050790,GO:0050896,GO:0051716,GO:0065007,GO:0065009,GO:0071496,GO:0071704,GO:0090304,GO:0097159,GO:0098772,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006557 262.0
BYD2_k127_6659779_11 PFAM Mammalian cell entry related domain protein K02067 - - 0.0000000000000000000000000000000000000000000000000000000002798 215.0
BYD2_k127_6659779_12 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.000000000000000000000000000000000000000000001047 167.0
BYD2_k127_6659779_13 ABC-type transport auxiliary lipoprotein component K18480 - - 0.0000000000000000000000000000000000001713 149.0
BYD2_k127_6659779_14 DsrC like protein K11179 - - 0.000000000000000000000000000289 118.0
BYD2_k127_6659779_2 Sugar (and other) transporter - - - 1.413e-210 663.0
BYD2_k127_6659779_3 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001066 578.0
BYD2_k127_6659779_4 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006861 452.0
BYD2_k127_6659779_5 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007475 427.0
BYD2_k127_6659779_6 RadC-like JAB domain K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001536 382.0
BYD2_k127_6659779_7 Abc transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 351.0
BYD2_k127_6659779_8 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 288.0
BYD2_k127_6659779_9 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 289.0
BYD2_k127_6680974_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1572.0
BYD2_k127_6680974_1 Abc transporter K06158 - - 1.665e-319 987.0
BYD2_k127_6680974_10 Major Facilitator Superfamily K19577 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 413.0
BYD2_k127_6680974_11 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 GO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004764,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009507,GO:0009532,GO:0009536,GO:0009570,GO:0009790,GO:0009791,GO:0009793,GO:0009987,GO:0010154,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019632,GO:0019752,GO:0022414,GO:0032501,GO:0032502,GO:0032787,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046417,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0055114,GO:0061458,GO:0071704,GO:1901576,GO:1901615 1.1.1.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004604 387.0
BYD2_k127_6680974_12 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001086 389.0
BYD2_k127_6680974_13 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001158 359.0
BYD2_k127_6680974_14 TonB C terminal K03832 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 357.0
BYD2_k127_6680974_15 PFAM iron permease FTR1 K07243 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 351.0
BYD2_k127_6680974_16 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001238 331.0
BYD2_k127_6680974_17 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 325.0
BYD2_k127_6680974_18 aspartic-type endopeptidase activity K06202,K06985,K19054 GO:0003674,GO:0003824,GO:0004322,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006790,GO:0006807,GO:0006873,GO:0006875,GO:0006879,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008198,GO:0008199,GO:0009987,GO:0016043,GO:0016226,GO:0016491,GO:0016530,GO:0016722,GO:0016724,GO:0018282,GO:0018283,GO:0019538,GO:0019725,GO:0022607,GO:0030003,GO:0031163,GO:0033554,GO:0034599,GO:0034986,GO:0036211,GO:0042221,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0046916,GO:0048037,GO:0048878,GO:0050801,GO:0050896,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051716,GO:0055065,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0071704,GO:0071840,GO:0098771,GO:0140104,GO:1901564 1.16.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 310.0
BYD2_k127_6680974_19 ABC 3 transport family K02075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 290.0
BYD2_k127_6680974_2 RNB K01147 - 3.1.13.1 3.866e-314 972.0
BYD2_k127_6680974_20 Rhodanese Homology Domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005082 282.0
BYD2_k127_6680974_21 Rhodanese Homology Domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003082 277.0
BYD2_k127_6680974_22 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 - 3.1.22.4 0.00000000000000000000000000000000000000000000000000000000000000000000004909 242.0
BYD2_k127_6680974_23 PFAM ferric-uptake regulator K03711 - - 0.000000000000000000000000000000000000000000000000000000000000000000001374 238.0
BYD2_k127_6680974_24 ABC transporter, phosphonate, periplasmic substrate-binding protein K02044 - - 0.000000000000000000000000000000000000000000000000000000000000000008599 234.0
BYD2_k127_6680974_25 response to abiotic stimulus K06867 - - 0.00000000000000000000000000000000000000000000000002999 186.0
BYD2_k127_6680974_26 Cupredoxin-like domain - - - 0.000000000000000000000000000000000000004214 148.0
BYD2_k127_6680974_27 Frataxin-like domain K06202 - - 0.0000000000000000000000000000000003697 134.0
BYD2_k127_6680974_29 PFAM cytochrome c, class I K08738 - - 0.000000000000000001232 89.0
BYD2_k127_6680974_3 MgtE intracellular N domain K06213 - - 2.373e-253 787.0
BYD2_k127_6680974_31 - - - - 0.00009637 49.0
BYD2_k127_6680974_4 Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine K01586 - 4.1.1.20 6.565e-213 666.0
BYD2_k127_6680974_5 phosphate-selective porin O and P - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009721 587.0
BYD2_k127_6680974_6 PFAM sodium calcium exchanger membrane region K07300 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001671 573.0
BYD2_k127_6680974_7 SMART GGDEF domain containing protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007909 455.0
BYD2_k127_6680974_8 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008759 432.0
BYD2_k127_6680974_9 Zinc-uptake complex component A periplasmic K02077 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002839 416.0
BYD2_k127_6705241_0 von Willebrand factor, type A - - - 0.0 1102.0
BYD2_k127_6705241_1 ATPase associated with various cellular activities, AAA_5 K04748 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002071 529.0
BYD2_k127_6815900_0 Likely ribonuclease with RNase H fold. K06959 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002597 415.0
BYD2_k127_6815900_1 DSBA Oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000003633 212.0
BYD2_k127_6815900_2 COG1943 Transposase and inactivated derivatives - - - 0.000000000000000000327 88.0
BYD2_k127_6848884_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain M K00342 - 1.6.5.3 3.512e-266 825.0
BYD2_k127_6848884_1 Ammonium Transporter Family K03320,K06580 - - 3.075e-243 753.0
BYD2_k127_6848884_10 NUDIX domain K01515 - 3.6.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004432 304.0
BYD2_k127_6848884_11 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000003231 237.0
BYD2_k127_6848884_12 Sigma 54 modulation protein / S30EA ribosomal protein - - - 0.00000000000000000000000000000000000000000000000002327 183.0
BYD2_k127_6848884_13 NADH-Ubiquinone oxidoreductase (complex I) chain 5 L domain protein K00341 - 1.6.5.3 0.000000000000009309 74.0
BYD2_k127_6848884_2 PFAM aminotransferase class V K00830 - 2.6.1.44,2.6.1.45,2.6.1.51 4.052e-236 733.0
BYD2_k127_6848884_3 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 4.226e-222 698.0
BYD2_k127_6848884_4 glycolate oxidase iron-sulfur subunit K11473 - - 1.333e-202 638.0
BYD2_k127_6848884_5 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005159 645.0
BYD2_k127_6848884_6 PFAM FAD linked oxidase domain protein K00104,K11472 - 1.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 548.0
BYD2_k127_6848884_7 PFAM FAD linked oxidase domain protein K00102,K00104,K03777 - 1.1.2.4,1.1.3.15,1.1.5.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 503.0
BYD2_k127_6848884_8 Membrane transport protein K07088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 436.0
BYD2_k127_6848884_9 CHASE - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000162 344.0
BYD2_k127_6866785_0 Involved in the TonB-independent uptake of proteins K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003015 466.0
BYD2_k127_6866785_1 PFAM MotA TolQ ExbB proton channel K03562 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009111 355.0
BYD2_k127_6866785_2 Thioesterase-like superfamily K07107 - - 0.0000000000000000000000000000000000000000000000000000000000008474 212.0
BYD2_k127_6866785_3 TolA C-terminal K03646 - - 0.0000000000000000000000000000000000000000000000000000000009682 209.0
BYD2_k127_6866785_4 PFAM Biopolymer transport protein ExbD TolR K03560 - - 0.000000000000000000000000000000000000000000000000002549 186.0
BYD2_k127_6866785_5 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000002819 123.0
BYD2_k127_689963_0 TIGRFAM DNA polymerase III, alpha subunit K02337 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 576.0
BYD2_k127_689963_1 Cytochrome c-type biogenesis protein K02200 - - 0.00001662 55.0
BYD2_k127_6909621_0 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 2.08e-258 803.0
BYD2_k127_6909621_1 ABC1 family K03688 - - 3.696e-250 783.0
BYD2_k127_6909621_2 fad dependent oxidoreductase K07137 - - 9.145e-200 628.0
BYD2_k127_6909621_3 - - - - 0.000000000000000000000000000000000000000000000000000003655 197.0
BYD2_k127_6909621_4 Chemoreceptor zinc-binding domain - - - 0.00000000000000000000000000000000000000000000000001234 184.0
BYD2_k127_7003975_0 Respiratory nitrate reductase alpha N-terminal K00370 - 1.7.5.1 0.0 2366.0
BYD2_k127_7003975_1 Respiratory nitrate reductase beta C-terminal K00371 - 1.7.5.1 2.808e-314 966.0
BYD2_k127_7003975_10 peptidylprolyl isomerase K03769 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000002304 218.0
BYD2_k127_7003975_11 Nitrate reductase K00373 - - 0.00000000000000000000000000000000000000000000000000000000147 215.0
BYD2_k127_7003975_2 Major Facilitator Superfamily K02575 - - 7.417e-292 901.0
BYD2_k127_7003975_3 Major Facilitator Superfamily K02575 - - 3.411e-221 690.0
BYD2_k127_7003975_4 PFAM FAD linked oxidase domain protein K00102 - 1.1.2.4 2.25e-207 653.0
BYD2_k127_7003975_5 Cytochrome b(N-terminal)/b6/petB K00412 - - 9.645e-201 630.0
BYD2_k127_7003975_6 Nitrate reductase gamma subunit K00374 - 1.7.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003999 349.0
BYD2_k127_7003975_7 Probable molybdopterin binding domain K03831 - 2.7.7.75 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 289.0
BYD2_k127_7003975_8 C4-dicarboxylate transporter malic acid transport protein K03304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000046 256.0
BYD2_k127_7003975_9 Cytochrome C1 family K00413 - - 0.0000000000000000000000000000000000000000000000000000000000000000003531 235.0
BYD2_k127_7103437_0 DUF218 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001363 310.0
BYD2_k127_7103437_1 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000201 284.0
BYD2_k127_7103437_2 Belongs to the universal ribosomal protein uS9 family K02996 - - 0.000000000000000000000000000000000000000000000000000000000000000000002181 236.0
BYD2_k127_7103437_3 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145 - 1.2.1.38 0.000000000000000000000000000000000000000000000000000000000000000000003889 237.0
BYD2_k127_7103437_4 OsmC-like protein K07397 - - 0.00000000000000000000000000000000000000000000000000005107 187.0
BYD2_k127_7109541_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 0.0 1185.0
BYD2_k127_7109541_1 signal recognition particle SRP54 K02404 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002151 544.0
BYD2_k127_7109541_2 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005572 263.0
BYD2_k127_7123921_0 UBA THIF-type NAD FAD binding protein K22132 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009948 293.0
BYD2_k127_7123921_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000007739 242.0
BYD2_k127_7123921_2 - - - - 0.0000000000000000000000000000000000000000000000000000001807 197.0
BYD2_k127_7123921_3 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000002732 113.0
BYD2_k127_7153063_0 PFAM Carbamoyl-phosphate synthase L chain ATP-binding K01955 - 6.3.5.5 0.0 1884.0
BYD2_k127_7153063_1 May be involved in recombinational repair of damaged DNA K03631 - - 7.821e-266 827.0
BYD2_k127_7153063_10 PFAM sulfotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002437 412.0
BYD2_k127_7153063_11 hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002113 399.0
BYD2_k127_7153063_12 PFAM Chromate transporter K07240 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006572 382.0
BYD2_k127_7153063_13 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002307 340.0
BYD2_k127_7153063_14 Inositol monophosphatase family K01082 - 3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001392 338.0
BYD2_k127_7153063_15 Transposase IS200 like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003403 296.0
BYD2_k127_7153063_16 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008485 279.0
BYD2_k127_7153063_17 Domain of unknown function (DUF4202) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000009673 241.0
BYD2_k127_7153063_18 Catalyzes the synthesis of activated sulfate K00958 - 2.7.7.4 0.000000000000000000000000000000000000000000000000000000000000000000004494 258.0
BYD2_k127_7153063_19 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000000000000005535 227.0
BYD2_k127_7153063_2 Domain of unknown function (DUF4139) - - - 1.911e-222 698.0
BYD2_k127_7153063_20 serine threonine protein kinase - - - 0.00000000000000000000000000000000000000000000000000000000006532 210.0
BYD2_k127_7153063_21 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000000000000001339 173.0
BYD2_k127_7153063_22 CRS1_YhbY K07574 - - 0.0000000000000000000000000000000000000000001378 161.0
BYD2_k127_7153063_23 cytochrome - - - 0.000000000000000000000000000000001435 132.0
BYD2_k127_7153063_24 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.00000000000000000000000000000002136 130.0
BYD2_k127_7153063_25 Domain of unknown function (DUF3330) - - - 0.0000000588 56.0
BYD2_k127_7153063_3 Carbamoyl-phosphate synthase small chain, CPSase domain K01956 - 6.3.5.5 2.413e-207 649.0
BYD2_k127_7153063_4 CAAX prenyl protease N-terminal, five membrane helices K06013 - 3.4.24.84 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007739 605.0
BYD2_k127_7153063_5 Winged helix-turn-helix transcription repressor, HrcA DNA-binding K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002009 594.0
BYD2_k127_7153063_6 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008839,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019752,GO:0019877,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576 1.17.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003188 454.0
BYD2_k127_7153063_7 Catalyzes the ferrous insertion into protoporphyrin IX K01772 - 4.99.1.1,4.99.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004694 436.0
BYD2_k127_7153063_8 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006349 426.0
BYD2_k127_7153063_9 glycosyl - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003469 419.0
BYD2_k127_7173321_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 0.0 1044.0
BYD2_k127_7173321_1 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 572.0
BYD2_k127_7173321_2 Type I GTP cyclohydrolase folE2 K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 487.0
BYD2_k127_7173321_3 Glutamine amidotransferase class-I K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005529 355.0
BYD2_k127_7173321_4 Transcriptional regulator K18304 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 292.0
BYD2_k127_7173321_5 PFAM Autoinducer synthesis protein K13060,K13061 - 2.3.1.184 0.000000000000000000000000000000000000000000000000000000000000000000000001866 249.0
BYD2_k127_7173321_6 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000009609 168.0
BYD2_k127_7173321_7 Polyprenyl synthetase K00795 - 2.5.1.1,2.5.1.10 0.00000000000000000000000421 102.0
BYD2_k127_7173321_8 sequence-specific DNA binding - - - 0.000000000000000001759 87.0
BYD2_k127_7232942_0 ABC transporter transmembrane region K06147 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007517 349.0
BYD2_k127_7232942_1 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000002088 141.0
BYD2_k127_7232942_2 Deacetylates O-acetyl-ADP ribose. Down-regulates ribonuclease 3 (RNase III) activity. Acts by interacting directly with the region of the ribonuclease that is required for dimerization activation - GO:0003674,GO:0003824,GO:0004857,GO:0005488,GO:0005515,GO:0008150,GO:0008428,GO:0009892,GO:0010605,GO:0016787,GO:0019213,GO:0019219,GO:0019222,GO:0019899,GO:0030234,GO:0031323,GO:0031324,GO:0032069,GO:0032074,GO:0043086,GO:0043900,GO:0044092,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0061463,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1900190,GO:1900231 - 0.0000000000000000000000000001849 115.0
BYD2_k127_724972_0 Protein of unknown function - - - 0.0 1278.0
BYD2_k127_724972_1 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 0.0 1229.0
BYD2_k127_724972_2 PFAM peptidase U62 modulator of DNA gyrase K03568 - - 2.172e-263 816.0
BYD2_k127_724972_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 7.714e-221 692.0
BYD2_k127_724972_4 PFAM Adenylyl cyclase class-3 4 guanylyl cyclase K01769 - 4.6.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008025 606.0
BYD2_k127_724972_5 PFAM Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K01501,K11206 - 3.5.5.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 458.0
BYD2_k127_724972_6 Riboflavin kinase K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003167 327.0
BYD2_k127_724972_7 Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms K07216 - - 0.00000000000000000000000000000000007544 139.0
BYD2_k127_7262029_0 Diguanylate cyclase - - - 2.231e-224 711.0
BYD2_k127_7262029_1 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 4.361e-220 691.0
BYD2_k127_7262029_2 Carbohydrate phosphorylase K00688 - 2.4.1.1 2.034e-206 657.0
BYD2_k127_7262029_3 Pyridine nucleotide-disulphide oxidoreductase K00529,K18227,K18249 - 1.18.1.3 1.467e-198 626.0
BYD2_k127_7262029_4 serine protease K07403 - - 2.216e-197 624.0
BYD2_k127_7262029_5 Myosin-crossreactive antigen K10254 - 4.2.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 606.0
BYD2_k127_7262029_6 Type II secretion system (T2SS), protein E, N-terminal domain K02454 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 565.0
BYD2_k127_7262029_7 PFAM band 7 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007652 427.0
BYD2_k127_7262029_8 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005003 311.0
BYD2_k127_7262029_9 Belongs to the acylphosphatase family K01512 - 3.6.1.7 0.000000000000000000000000000000000000000005184 156.0
BYD2_k127_7265861_0 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 0.0 1088.0
BYD2_k127_7265861_1 Polynucleotide kinase 3 phosphatase K03273 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008270,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0034200,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0046872,GO:0046914 3.1.3.82,3.1.3.83 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006302 293.0
BYD2_k127_7265861_2 Glycyl-tRNA synthetase alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000002972 156.0
BYD2_k127_7308097_0 Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross-linking of the peptide subunits) K05365,K05366 - 2.4.1.129,3.4.16.4 0.0 1255.0
BYD2_k127_7308097_1 aminoacyl-histidine dipeptidase K01270 - - 7.98e-235 734.0
BYD2_k127_7308097_10 KTSC domain - - - 0.00000000000000000000000000000000000000534 148.0
BYD2_k127_7308097_11 Phytochrome region - - - 0.00000000000000000000000000000000000000661 160.0
BYD2_k127_7308097_13 - - - - 0.0000001257 63.0
BYD2_k127_7308097_14 Taurine catabolism dioxygenase TauD, TfdA family - - - 0.00002975 49.0
BYD2_k127_7308097_2 Specifically methylates the adenine in position 1618 of 23S rRNA K06970 - 2.1.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 440.0
BYD2_k127_7308097_3 abc transporter K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001327 412.0
BYD2_k127_7308097_4 Mitochondrial biogenesis AIM24 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001619 386.0
BYD2_k127_7308097_5 Etoposide-induced protein 2.4 (EI24) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007782 363.0
BYD2_k127_7308097_6 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001331 369.0
BYD2_k127_7308097_7 photosynthesis K12132,K20543 - 2.7.11.1 0.000000000000000000000000000000000000000000001094 171.0
BYD2_k127_7308097_8 OmpA family K02557 - - 0.000000000000000000000000000000000000000003746 164.0
BYD2_k127_7308097_9 Domain of unknown function (DUF4349) - - - 0.000000000000000000000000000000000000001224 160.0
BYD2_k127_735982_0 Histidine Phosphotransfer domain K02487,K06596 - - 8.677e-292 912.0
BYD2_k127_735982_1 Belongs to the UPF0301 (AlgH) family K07735 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002479 302.0
BYD2_k127_735982_2 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 - - 0.0000000000000000000000000000000000000000000000000005756 186.0
BYD2_k127_7384_0 Threonine synthase N terminus K01733 - 4.2.3.1 2.996e-259 804.0
BYD2_k127_7384_1 Homoserine dehydrogenase K00003 - 1.1.1.3 1.122e-220 687.0
BYD2_k127_7384_2 SIR2-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 327.0
BYD2_k127_7384_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000004975 212.0
BYD2_k127_7384_4 Peptidase S24-like - - - 0.00000000000000000000000000000000000000004755 156.0
BYD2_k127_7384_5 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.00000000000000000000000000000000000001182 146.0
BYD2_k127_7384_6 Protein of unknown function (DUF2721) - - - 0.000000000000000000000000000000004132 136.0
BYD2_k127_7384_7 DegT/DnrJ/EryC1/StrS aminotransferase family K13010 - 2.6.1.102 0.00000000000000000000000000000001221 127.0
BYD2_k127_742002_0 Bacterial extracellular solute-binding proteins, family 5 Middle - - - 8.84e-255 790.0
BYD2_k127_742002_1 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001955 346.0
BYD2_k127_742002_2 PFAM lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001016 281.0
BYD2_k127_742002_3 - - - - 0.0000000000000000000000000000000000000000000000000000000000006382 216.0
BYD2_k127_742002_4 Protein of Unknown function (DUF2784) - - - 0.00000000000000000000000000000000000000000000002413 173.0
BYD2_k127_742002_5 - - - - 0.0000000000000000000000000000001493 130.0
BYD2_k127_742002_6 - - - - 0.00000000000000001667 87.0
BYD2_k127_742002_7 - - - - 0.00000000000003386 77.0
BYD2_k127_742002_8 Transposase K07486 - - 0.00000000000005362 72.0
BYD2_k127_7432035_0 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 0.0 1031.0
BYD2_k127_7432035_1 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K00997,K01207 - 2.7.8.7,3.2.1.52 3.434e-198 621.0
BYD2_k127_7432035_2 Nucleotidyl transferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000843 500.0
BYD2_k127_7432035_3 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001317 393.0
BYD2_k127_7432035_4 Phosphorylase superfamily K00772,K03815 - 2.4.2.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000351 392.0
BYD2_k127_7432035_5 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001492 376.0
BYD2_k127_7432035_6 Phosphoribosyl transferase domain K00760 - 2.4.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001345 288.0
BYD2_k127_7432035_7 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 - 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000007998 263.0
BYD2_k127_7432035_8 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000000000000000000000000000000006443 164.0
BYD2_k127_7449364_0 Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB NOP family K03500 GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0031974,GO:0031981,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:1901360 2.1.1.176 1.477e-217 680.0
BYD2_k127_7449364_1 PFAM AIR synthase related protein domain protein K01933 - 6.3.3.1 7.219e-195 611.0
BYD2_k127_7449364_2 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001648 337.0
BYD2_k127_7449364_3 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000005866 259.0
BYD2_k127_7449364_4 PFAM PEGA domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000009747 263.0
BYD2_k127_7449364_5 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000000000000001624 241.0
BYD2_k127_7449364_6 Protein of unknown function (DUF3108) - - - 0.000000000000000000000000000000000000000000000000000000215 201.0
BYD2_k127_7449364_7 AI-2E family transporter - - - 0.000000000003091 73.0
BYD2_k127_7449364_8 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 - - 0.0000001389 53.0
BYD2_k127_7462175_0 PFAM response regulator receiver K02483,K07666 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000976 366.0
BYD2_k127_7462175_1 Pfam:DUF989 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003107 266.0
BYD2_k127_7462175_2 Prokaryotic cytochrome b561 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001104 254.0
BYD2_k127_7462175_3 Dihaem cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000005813 209.0
BYD2_k127_7462175_4 Domain of unknown function (DUF1924) - - - 0.00000000000000000000000000000000000000000000002095 174.0
BYD2_k127_7462175_5 Histidine kinase K07645 - 2.7.13.3 0.000000000005079 68.0
BYD2_k127_746629_0 PFAM glycosyl transferase family 39 - - - 1.025e-216 685.0
BYD2_k127_746629_1 Alpha beta hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000529 505.0
BYD2_k127_746629_2 Dual specificity phosphatase, catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005848 363.0
BYD2_k127_746629_3 Small Multidrug Resistance protein - - - 0.000000000000000000000000000000000000000000000000000000000000002671 220.0
BYD2_k127_746629_4 Belongs to the DegT DnrJ EryC1 family - - - 0.0000000000000000000000000000000000000000000000000000000000002816 212.0
BYD2_k127_746629_5 - - - - 0.00000007177 59.0
BYD2_k127_7529889_0 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 0.0 1073.0
BYD2_k127_7529889_1 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004551 490.0
BYD2_k127_7529889_2 Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00677 - 2.3.1.129 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003929 415.0
BYD2_k127_7529889_3 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 - 2.4.1.182 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 362.0
BYD2_k127_7529889_4 SMART PDZ DHR GLGF domain protein K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006146 300.0
BYD2_k127_7529889_5 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.00000000000000000000000000000000000000000000000000000000000000000000000001573 255.0
BYD2_k127_7529889_6 PFAM outer membrane chaperone Skp (OmpH) K06142 - - 0.00000000000000000000000000000000000000000000000000000000005422 208.0
BYD2_k127_7532390_0 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001685 419.0
BYD2_k127_7532390_1 PFAM PilT protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000002913 225.0
BYD2_k127_7532390_2 PFAM Peptidase M18, aminopeptidase I K01267 - 3.4.11.21 0.0000000000000000000000000000000000000000000000000000000000005192 215.0
BYD2_k127_7532390_3 prlF antitoxin for toxin YhaV_toxin - - - 0.0000000000000000000000000000000002361 135.0
BYD2_k127_7532390_4 Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway K03181 - 4.1.3.40 0.0000000000000000000000000000001428 126.0
BYD2_k127_7538830_0 Argininosuccinate lyase C-terminal K01755 - 4.3.2.1 2.311e-256 799.0
BYD2_k127_7538830_1 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 6.689e-220 687.0
BYD2_k127_7538830_2 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 1.444e-200 629.0
BYD2_k127_7538830_3 Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif K02493 - 2.1.1.297 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008295 333.0
BYD2_k127_7538830_4 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.00000000000000000000000000000000000000000001402 163.0
BYD2_k127_7538830_5 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 0.00000000000000000000000000000000007324 134.0
BYD2_k127_7538830_6 Histidine kinase K08082 - 2.7.13.3 0.0000000000006774 73.0
BYD2_k127_7538830_7 - - - - 0.00000007658 55.0
BYD2_k127_7545923_0 Malate:quinone oxidoreductase (Mqo) K00116 - 1.1.5.4 1.003e-219 691.0
BYD2_k127_7545923_1 PLD-like domain K06132 - - 6.138e-214 675.0
BYD2_k127_7545923_2 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0005488,GO:0005515,GO:0042802,GO:0042803,GO:0046983 1.3.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001515 589.0
BYD2_k127_7545923_3 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-) CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate K07566 - 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000001589 257.0
BYD2_k127_7545923_5 Protein of unknown function (DUF1614) - - - 0.000000000000000000000000000000000000000000000000000000000000002266 224.0
BYD2_k127_7545923_6 UPF0114 protein - - - 0.000000000000000000000000000000000000000000000000000000000000004981 221.0
BYD2_k127_7545923_7 - - - - 0.000000000000000000000000000000000000000000000000000001198 196.0
BYD2_k127_7545923_8 - - - - 0.00000000000000000000000000000000000002963 158.0
BYD2_k127_7545923_9 Late embryogenesis abundant protein - - - 0.00000000000000000000000000000003836 134.0
BYD2_k127_7548103_0 Belongs to the UDP-glucose GDP-mannose dehydrogenase family K00012 - 1.1.1.22 1.85e-229 713.0
BYD2_k127_7548103_1 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007487 499.0
BYD2_k127_7548103_2 LysR substrate binding domain K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005171 338.0
BYD2_k127_757756_0 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 469.0
BYD2_k127_757756_1 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007386 304.0
BYD2_k127_757756_2 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.000000000000000000000000000000000000000000000000000000000000003635 217.0
BYD2_k127_757756_3 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.0000005189 53.0
BYD2_k127_761539_0 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 4.815e-207 653.0
BYD2_k127_761539_1 Esterase of the alpha-beta hydrolase superfamily K07001 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004787 482.0
BYD2_k127_761539_2 Transporter associated domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001038 439.0
BYD2_k127_761539_3 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a repressor K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009453 399.0
BYD2_k127_761539_4 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K01947,K03525 - 2.7.1.33,6.3.4.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001593 303.0
BYD2_k127_761539_5 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.0000000000000000000000000000000000000000000000000000000000000002796 225.0
BYD2_k127_761539_6 PFAM Sporulation domain protein - - - 0.00000000000000000000000000000000000000000000000000005881 194.0
BYD2_k127_7656917_0 SurA N-terminal domain K03770 - 5.2.1.8 6.144e-238 751.0
BYD2_k127_7656917_1 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002182 441.0
BYD2_k127_7656917_2 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004025 352.0
BYD2_k127_7656917_3 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002034 312.0
BYD2_k127_7656917_4 - - - - 0.0000000001381 62.0
BYD2_k127_765765_0 PFAM sigma-54 factor interaction domain-containing protein K06714 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002976 539.0
BYD2_k127_765765_1 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004185 439.0
BYD2_k127_7705334_0 Belongs to the IlvD Edd family K01687 - 4.2.1.9 0.0 1058.0
BYD2_k127_7705334_1 Protein of unknown function, DUF255 K06888 - - 1.073e-257 811.0
BYD2_k127_7705334_10 PFAM cytochrome c class I K08738 - - 0.00000000000000000000000000176 116.0
BYD2_k127_7705334_2 PFAM Type II secretion system F domain K02653 - - 1.811e-200 630.0
BYD2_k127_7705334_3 Domain of unknown function DUF21 - - - 5.092e-196 618.0
BYD2_k127_7705334_4 Receptor family ligand binding region K01999 - - 5.085e-195 614.0
BYD2_k127_7705334_5 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000018 446.0
BYD2_k127_7705334_6 Phospholipase A1 K01058 - 3.1.1.32,3.1.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003169 342.0
BYD2_k127_7705334_7 Belongs to the binding-protein-dependent transport system permease family K01997 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003635 328.0
BYD2_k127_7705334_8 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000001844 214.0
BYD2_k127_7705334_9 PFAM cytochrome c class I K08738 - - 0.0000000000000000000000000000000003871 134.0
BYD2_k127_7711840_0 Type II and III secretion system protein K02280 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002056 579.0
BYD2_k127_7711840_1 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008837,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016853,GO:0016854,GO:0016855,GO:0019752,GO:0036361,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0047661,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.1.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001332 465.0
BYD2_k127_7711840_10 alginic acid biosynthetic process K10297 - - 0.00008775 46.0
BYD2_k127_7711840_2 Phage integrase, N-terminal SAM-like domain K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006125 340.0
BYD2_k127_7711840_3 Flp pilus assembly protein CpaB K02279 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006352 342.0
BYD2_k127_7711840_4 TIGRFAM DNA-3-methyladenine glycosylase I K01246 - 3.2.2.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002964 297.0
BYD2_k127_7711840_5 Protein of unknown function, DUF484 K09921 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001077 287.0
BYD2_k127_7711840_6 SMART CoA-binding domain protein K06929 - - 0.0000000000000000000000000000000000000000000000000007716 189.0
BYD2_k127_7711840_7 Peptidase A24A, prepilin type IV K02278 - 3.4.23.43 0.0000000000000000000000000000000000001671 148.0
BYD2_k127_7711840_9 Flp/Fap pilin component - - - 0.0000000006782 63.0
BYD2_k127_7790236_0 sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006353 440.0
BYD2_k127_7790236_1 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 400.0
BYD2_k127_7790236_2 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000002799 72.0
BYD2_k127_7819332_0 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 7.619e-272 855.0
BYD2_k127_7819332_1 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004211 561.0
BYD2_k127_7819332_2 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002876 427.0
BYD2_k127_7819332_3 Phosphotransferase enzyme family K07102 - 2.7.1.221 0.000000000000000000000000000000000000000000000009698 175.0
BYD2_k127_7905609_0 leucine-rich repeat-containing protein typical subtype - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001997 571.0
BYD2_k127_7905609_1 ABC transporter K02049,K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000079 439.0
BYD2_k127_7905609_2 Belongs to the ompA family K03286 - - 0.00000000000000000000001405 104.0
BYD2_k127_793898_0 Belongs to the peptidase M16 family K07263 - - 1.377e-211 665.0
BYD2_k127_793898_1 Peptidase M16 inactive domain K07263 - - 2.606e-194 616.0
BYD2_k127_793898_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001575 509.0
BYD2_k127_793898_3 TIGRFAM cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000007076 185.0
BYD2_k127_7951750_0 transporter of a GTP-driven Fe(2 ) uptake system K04759 - - 1.055e-309 958.0
BYD2_k127_7951750_1 A domain family that is part of the cupin metalloenzyme superfamily. K18850 - 1.14.11.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 582.0
BYD2_k127_7951750_10 NlpB/DapX lipoprotein K07287 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 298.0
BYD2_k127_7951750_11 Bacterial protein of unknown function (DUF899) K03564 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000009433 256.0
BYD2_k127_7951750_12 Peptidyl-prolyl cis-trans isomerase K03775 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000004007 249.0
BYD2_k127_7951750_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004594 248.0
BYD2_k127_7951750_14 regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed - - - 0.00000000000000000000000000000003923 136.0
BYD2_k127_7951750_15 Cytochrome c - - - 0.000000000000000000000000001002 115.0
BYD2_k127_7951750_16 FeoA K04758 - - 0.000000000000000000000008867 109.0
BYD2_k127_7951750_2 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase K00057 - 1.1.1.94 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009354 516.0
BYD2_k127_7951750_20 Protein of unknown function (DUF1697) - - - 0.00000000267 57.0
BYD2_k127_7951750_3 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 - 4.3.3.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005995 506.0
BYD2_k127_7951750_4 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003593 419.0
BYD2_k127_7951750_5 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002803 377.0
BYD2_k127_7951750_6 Beta-lactamase superfamily domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005292 373.0
BYD2_k127_7951750_7 Inhibitor of apoptosis-promoting Bax1 K19416 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 359.0
BYD2_k127_7951750_8 Conserved hypothetical protein (DUF2461) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006297 313.0
BYD2_k127_7951750_9 Part of the ABC transporter complex PstSACB involved in phosphate import K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000505 308.0
BYD2_k127_808664_0 Cytochrome C assembly protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002492 394.0
BYD2_k127_808664_1 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 - - 0.000000000000000000000000000000000000000000000000000004108 192.0
BYD2_k127_808664_2 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000001063 188.0
BYD2_k127_808664_3 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.000000000000000000000000000000000000007378 145.0
BYD2_k127_8092455_0 response regulator receiver - - - 2.708e-247 802.0
BYD2_k127_8092455_1 chemotaxis, protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 461.0
BYD2_k127_8092455_10 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K14392 - - 0.00000000000000000000000000000005394 125.0
BYD2_k127_8092455_11 - - - - 0.0000000000000000000000000003854 119.0
BYD2_k127_8092455_2 Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) K00768 GO:0003674,GO:0003824,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008939,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016740,GO:0016757,GO:0016763,GO:0017144,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042364,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.4.2.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005039 419.0
BYD2_k127_8092455_3 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03386 - 1.11.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003693 372.0
BYD2_k127_8092455_4 Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate K02233 - 2.7.8.26 0.0000000000000000000000000000000000000000000000000000000000000005476 229.0
BYD2_k127_8092455_5 Response regulator receiver K02658 - - 0.00000000000000000000000000000000000000000000000000471 183.0
BYD2_k127_8092455_6 VirC1 protein K03496 - - 0.00000000000000000000000000000000000000000000000001933 188.0
BYD2_k127_8092455_7 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000000000001762 178.0
BYD2_k127_8092455_8 CheW-like domain - - - 0.000000000000000000000000000000000008466 142.0
BYD2_k127_8092455_9 Phosphoglycerate mutase family K02226 - 3.1.3.73 0.0000000000000000000000000000000001519 145.0
BYD2_k127_8308880_0 Amino acid permease - - - 2.132e-253 797.0
BYD2_k127_8308880_1 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.000000000000002347 76.0
BYD2_k127_8354823_0 V-type ATPase 116kDa subunit family K02123 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 563.0
BYD2_k127_8354823_1 ATP synthase (C/AC39) subunit K02119 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001436 269.0
BYD2_k127_8354823_2 ATP synthase subunit C K02124 - - 0.00000000001201 67.0
BYD2_k127_8354823_3 - - - - 0.00000001381 57.0
BYD2_k127_8361141_0 Diguanylate cyclase - - - 1.086e-281 908.0
BYD2_k127_8361141_1 Rubrerythrin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004612 264.0
BYD2_k127_8369512_0 Belongs to the 5'-nucleotidase family K11751,K17224 - 3.1.3.5,3.6.1.45 0.0 1032.0
BYD2_k127_8369512_1 PFAM tRNA synthetase class II (D K and N) K04567 - 6.1.1.6 3.991e-275 851.0
BYD2_k127_8369512_10 DsrE/DsrF-like family K09004 - - 0.0000000000000000000000000000000000000000000000000000004252 196.0
BYD2_k127_8369512_11 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000004451 180.0
BYD2_k127_8369512_12 DsrE/DsrF-like family K09004 - - 0.00000000000000000000000000000000000000000005414 165.0
BYD2_k127_8369512_13 PFAM Sulphur oxidation protein SoxZ K17227 - - 0.0000000000000000000000000000000000000000006689 159.0
BYD2_k127_8369512_14 Cytochrome c K17223 - - 0.000000000000000000000000000000000001234 145.0
BYD2_k127_8369512_15 PIN domain - - - 0.000000000000000000000000000001245 126.0
BYD2_k127_8369512_16 TIGRFAM looped-hinge helix DNA binding domain, AbrB family - - - 0.00000000008223 66.0
BYD2_k127_8369512_17 Protein of unknown function C-terminus (DUF2399) - - - 0.000945 43.0
BYD2_k127_8369512_2 Oxidoreductase FAD-binding domain protein K00523,K18248 - 1.17.1.1 7.516e-204 646.0
BYD2_k127_8369512_3 transporter component K07112 - - 3.266e-202 633.0
BYD2_k127_8369512_4 Thiosulfate-oxidizing multienzyme system protein SoxA K17222 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008675 390.0
BYD2_k127_8369512_5 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007756 307.0
BYD2_k127_8369512_6 helix_turn_helix, cAMP Regulatory protein K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001799 296.0
BYD2_k127_8369512_7 Sigma-70, region 4 K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003831 293.0
BYD2_k127_8369512_8 AntiSigma factor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001007 273.0
BYD2_k127_8369512_9 sulfur oxidation protein SoxY K17226 - - 0.0000000000000000000000000000000000000000000000000000000000009793 213.0
BYD2_k127_8399696_0 Sulfate transporter antisigma-factor antagonist STAS - - - 6.447e-282 873.0
BYD2_k127_8399696_1 transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002443 614.0
BYD2_k127_8433272_0 7 transmembrane helices usually fused to an inactive transglutaminase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006177 443.0
BYD2_k127_8433272_1 DNA ligase K01971 - 6.5.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004261 357.0
BYD2_k127_8433272_2 Sugar-transfer associated ATP-grasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000902 255.0
BYD2_k127_8433272_3 Glycosyl transferase family 41 - - - 0.000000000000000000000005108 118.0
BYD2_k127_8466054_0 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 606.0
BYD2_k127_8466054_1 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001164 276.0
BYD2_k127_8466054_2 Putative member of DMT superfamily (DUF486) K09922 - - 0.000000000000000000000000000000000000000000000000000000000000000001803 227.0
BYD2_k127_8466054_3 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000003165 212.0
BYD2_k127_8466054_4 - - - - 0.0000000000000000000009112 96.0
BYD2_k127_8505272_0 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 GO:0000166,GO:0003674,GO:0003824,GO:0004748,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005971,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009165,GO:0009262,GO:0009263,GO:0009987,GO:0016491,GO:0016725,GO:0016728,GO:0018130,GO:0019438,GO:0019637,GO:0032991,GO:0034641,GO:0034654,GO:0036094,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046483,GO:0055086,GO:0055114,GO:0061731,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1990204 1.17.4.1 0.0 1611.0
BYD2_k127_8505272_1 Dolichyl-phosphate-mannose-protein mannosyltransferase - - - 3.823e-237 743.0
BYD2_k127_8505272_10 Ribosomal protein L31 K02909 - - 0.00000000000000000000000000000000001372 139.0
BYD2_k127_8505272_11 protein homooligomerization - - - 0.00000000000000002244 85.0
BYD2_k127_8505272_12 - K06950 - - 0.000000000000002292 79.0
BYD2_k127_8505272_13 - - - - 0.000355 46.0
BYD2_k127_8505272_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 1.659e-221 691.0
BYD2_k127_8505272_3 PFAM major facilitator superfamily MFS_1 - - - 1.06e-220 690.0
BYD2_k127_8505272_4 His Kinase A (phosphoacceptor) domain K02668 - 2.7.13.3 2.757e-204 648.0
BYD2_k127_8505272_5 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 - 4.2.3.5 4.904e-202 632.0
BYD2_k127_8505272_6 Sigma-54 interaction domain protein K02667 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005044 548.0
BYD2_k127_8505272_7 Polyprenyl synthetase K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001023 515.0
BYD2_k127_8505272_8 N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD K03806 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008745,GO:0009056,GO:0009057,GO:0009253,GO:0009254,GO:0009392,GO:0016020,GO:0016787,GO:0016810,GO:0016811,GO:0019867,GO:0030203,GO:0043167,GO:0043169,GO:0043170,GO:0046872,GO:0046914,GO:0061783,GO:0071704,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 3.5.1.28 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002592 279.0
BYD2_k127_8505272_9 polyketide cyclase - - - 0.0000000000000000000000000000000000000000001059 162.0
BYD2_k127_8514464_0 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009056,GO:0009057,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019538,GO:0030163,GO:0042623,GO:0042802,GO:0043170,GO:0044238,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - 0.0 1058.0
BYD2_k127_8514464_1 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 - 2.5.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007923 376.0
BYD2_k127_8514464_2 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 - 2.1.1.166 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006262 334.0
BYD2_k127_8514464_3 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000005558 95.0
BYD2_k127_8555995_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1688.0
BYD2_k127_8555995_1 General secretory system II protein E domain protein K02454,K02652,K12276 - - 7.252e-273 849.0
BYD2_k127_8555995_10 Prolyl oligopeptidase family K06889 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 301.0
BYD2_k127_8555995_11 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007907 265.0
BYD2_k127_8555995_12 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 - - 0.000000000000000000000000000000000000000000000000000000000000006029 219.0
BYD2_k127_8555995_13 Protein of unknown function (DUF3015) - - - 0.0000000000000000000000000000000000000000000000000001781 189.0
BYD2_k127_8555995_14 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.0000000000000000000000000000000000000000000006725 167.0
BYD2_k127_8555995_15 PFAM cytochrome c class I K08738 - - 0.000000000000000000000000000000000000000000001608 166.0
BYD2_k127_8555995_16 - - - - 0.000000000000000000000000000000000000000004098 158.0
BYD2_k127_8555995_17 Bacterial SH3 domain - - - 0.00000000000000000000000000000000000000009384 160.0
BYD2_k127_8555995_18 Glutaredoxin K03676 - - 0.00000000000000000000000000000000222 133.0
BYD2_k127_8555995_19 Rhodanese Homology Domain K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000963 128.0
BYD2_k127_8555995_2 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K15633 - 5.4.2.12 1.083e-265 825.0
BYD2_k127_8555995_20 Protein of unknown function (DUF2892) - - - 0.00000000000000000000000002607 109.0
BYD2_k127_8555995_3 Belongs to the peptidase S41A family K03797 - 3.4.21.102 5.831e-225 704.0
BYD2_k127_8555995_4 Virulence factor membrane-bound polymerase, C-terminal - - - 6.317e-217 691.0
BYD2_k127_8555995_5 Domain of unknown function (DUF4105) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003444 541.0
BYD2_k127_8555995_6 PFAM NAD-dependent glycerol-3-phosphate dehydrogenase domain protein K00057 - 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 467.0
BYD2_k127_8555995_7 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002379 459.0
BYD2_k127_8555995_8 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 428.0
BYD2_k127_8555995_9 PFAM UBA THIF-type NAD FAD binding protein K21029 - 2.7.7.80 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001901 376.0
BYD2_k127_8565147_0 S4 RNA-binding domain K06182 - 5.4.99.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 325.0
BYD2_k127_8565147_1 Domain of unknown function (DUF1972) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003953 293.0
BYD2_k127_8565147_2 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase UDP-N-acetylglucosamine-1-phosphate transferase - - - 0.0000000000000000000000000000000000000000000000000000004938 205.0
BYD2_k127_8565147_3 - - - - 0.000000000000000000000000000000000000000002486 165.0
BYD2_k127_8565147_4 COG1943 Transposase and inactivated derivatives - - - 0.00000000000002276 79.0
BYD2_k127_8597500_0 Putative phage tail protein - - - 4.447e-214 704.0
BYD2_k127_8597500_1 Toprim domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 572.0
BYD2_k127_8597500_10 DNA (cytosine-5-)-methyltransferase activity K00558 - 2.1.1.37 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002718 285.0
BYD2_k127_8597500_11 Phage minor tail protein L - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007679 269.0
BYD2_k127_8597500_12 CHAP domain - - - 0.00000000000000000000000000000000000000000000000000000000004329 208.0
BYD2_k127_8597500_13 - - - - 0.0000000000000000000000000000000000000000000000000000002065 201.0
BYD2_k127_8597500_14 Enoyl-CoA hydratase - - - 0.00000000000000000000000000000000000000000000121 169.0
BYD2_k127_8597500_15 Phage tail tube protein, TTP - - - 0.00000000000000000000000000000000000000000001936 169.0
BYD2_k127_8597500_16 COG5281, Phage-related minor tail protein - - - 0.00000000000000000000000000000000000000006315 172.0
BYD2_k127_8597500_17 - - - - 0.0000000000000000000000000000000000000009763 161.0
BYD2_k127_8597500_19 lambda tail assembly I - - - 0.000000000000000000000000000000000784 141.0
BYD2_k127_8597500_2 Pfam:DUF3596 K14059 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 543.0
BYD2_k127_8597500_20 - - - - 0.000000000000000000000000000001294 124.0
BYD2_k127_8597500_21 Domain of unknown function (DUF4376) - - - 0.000000000000000000000000000004547 125.0
BYD2_k127_8597500_23 - - - - 0.00000000000000000000009577 103.0
BYD2_k127_8597500_24 Phage regulatory protein CII (CP76) - - - 0.0000000000000000000002264 102.0
BYD2_k127_8597500_27 Phage minor tail protein - - - 0.00000000000002991 76.0
BYD2_k127_8597500_28 tail collar domain protein - - - 0.0000000000000565 83.0
BYD2_k127_8597500_29 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 - - 0.0000000000007908 73.0
BYD2_k127_8597500_3 Phage terminase large subunit (GpA) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006273 491.0
BYD2_k127_8597500_30 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT - - - 0.0000000000204 67.0
BYD2_k127_8597500_31 Phage related hypothetical protein (DUF1799) - - - 0.0000000002202 66.0
BYD2_k127_8597500_33 - - - - 0.0000000009447 65.0
BYD2_k127_8597500_34 - - - - 0.000000007251 67.0
BYD2_k127_8597500_36 - - - - 0.00000007274 57.0
BYD2_k127_8597500_37 - - - - 0.00000008807 61.0
BYD2_k127_8597500_4 Belongs to the 'phage' integrase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002759 465.0
BYD2_k127_8597500_40 - - - - 0.000006187 53.0
BYD2_k127_8597500_41 Phage tail assembly chaperone - - - 0.00001016 52.0
BYD2_k127_8597500_42 - - - - 0.0000117 50.0
BYD2_k127_8597500_44 DNA binding - - - 0.000125 50.0
BYD2_k127_8597500_47 Peptidase S24-like - - - 0.000776 48.0
BYD2_k127_8597500_5 Phage portal protein, lambda family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001346 430.0
BYD2_k127_8597500_6 Mu-like prophage major head subunit gpT - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 394.0
BYD2_k127_8597500_7 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 345.0
BYD2_k127_8597500_8 PFAM peptidase S49 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005613 333.0
BYD2_k127_8597500_9 JAB/MPN domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002944 288.0
BYD2_k127_8612781_0 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 - 2.3.1.234 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007399 526.0
BYD2_k127_8612781_1 Phage integrase, N-terminal SAM-like domain K04763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009329 513.0
BYD2_k127_8612781_2 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002027 270.0
BYD2_k127_8612781_3 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000000000000000183 211.0
BYD2_k127_8612781_4 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000000000008999 191.0
BYD2_k127_8612781_5 Methylated-DNA- protein -cysteine S-methyltransferase DNA binding K00567 - 2.1.1.63 0.00000000000000000000000002524 115.0
BYD2_k127_8638749_0 Transcriptional regulator, LysR family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 473.0
BYD2_k127_8638749_1 Pirin K06911 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007533 456.0
BYD2_k127_8638749_2 phospholipase Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001121 288.0
BYD2_k127_8638749_3 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002988 284.0
BYD2_k127_8638749_4 Uncharacterised protein family UPF0047 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000006324 247.0
BYD2_k127_8638749_5 - - - - 0.000000000000000000000000000000000000000000000000000000000000001564 222.0
BYD2_k127_8638749_6 DoxX K15977 - - 0.00000000000000000000000000000000000000000000000003051 182.0
BYD2_k127_8638749_7 - - - - 0.0000000000000000000002454 100.0
BYD2_k127_8688824_0 Large family of predicted nucleotide-binding domains K07175 - - 3.609e-255 792.0
BYD2_k127_8688824_1 Rhodanese Homology Domain K06917 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001972 409.0
BYD2_k127_8688824_2 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.00000000000000000000000000000000000000000000000000000000000000000000000001596 252.0
BYD2_k127_8688824_3 Belongs to the MsrB Met sulfoxide reductase family K07305,K12267 - 1.8.4.11,1.8.4.12 0.000000000000000000000000000000000000000000000000000000000001371 211.0
BYD2_k127_8688824_4 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) K01563,K11991 - 3.5.4.33,3.8.1.5 0.000000000000000000000000000000000000000000000000000003387 194.0
BYD2_k127_8688824_5 probably involved in intracellular septation K06190 - - 0.00000000000004256 73.0
BYD2_k127_8744242_0 Histidine Phosphotransfer domain K02487,K06596 - - 9.545e-275 875.0
BYD2_k127_8744242_1 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 1.983e-263 816.0
BYD2_k127_8744242_10 4-oxalocrotonate tautomerase K01821 - 5.3.2.6 0.000000000000000000000000004803 110.0
BYD2_k127_8744242_11 - - - - 0.0000000000001536 76.0
BYD2_k127_8744242_13 Sel1-like repeats. K07126 - - 0.000001789 57.0
BYD2_k127_8744242_14 - - - - 0.0000263 52.0
BYD2_k127_8744242_2 PFAM TrkA-N domain protein K03499 - - 1.011e-239 746.0
BYD2_k127_8744242_3 histidine kinase HAMP region domain protein K02660,K03406 - - 1.924e-199 642.0
BYD2_k127_8744242_4 Inositol monophosphatase family K01082,K01092 - 3.1.3.25,3.1.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 399.0
BYD2_k127_8744242_5 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 363.0
BYD2_k127_8744242_6 PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005167 347.0
BYD2_k127_8744242_7 Two component signalling adaptor domain K02659 - - 0.0000000000000000000000000000000000000000000000000000000000000000004684 233.0
BYD2_k127_8744242_8 cheY-homologous receiver domain K02657 - - 0.000000000000000000000000000000000000000000000000000000000000000001716 229.0
BYD2_k127_8744242_9 cheY-homologous receiver domain K02658 - - 0.00000000000000000000000000000000000000000000000000000001151 200.0
BYD2_k127_8754378_0 Citrate transporter - - - 2.319e-198 630.0
BYD2_k127_8754378_1 Cation transport ATPase (P-type) K01537 - 3.6.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004515 554.0
BYD2_k127_8754378_2 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002919 355.0
BYD2_k127_8754378_3 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.00000000000000000000000000000000000000000000004174 171.0
BYD2_k127_8766904_0 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000782 379.0
BYD2_k127_8766904_1 SCO1/SenC K07152 - - 0.0000000000000000000000000000000000000000000000000000000005948 208.0
BYD2_k127_8766904_3 Sortase family - - - 0.0002298 44.0
BYD2_k127_87995_0 PFAM Mur ligase middle domain protein K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 575.0
BYD2_k127_87995_1 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 444.0
BYD2_k127_87995_2 Sporulation related domain K03749 - - 0.000000000000000000000000000000000000000000000000001902 188.0
BYD2_k127_87995_3 Colicin V production protein K03558 - - 0.000000000000000000000000000000000000000439 154.0
BYD2_k127_8806304_0 DSBA-like thioredoxin domain K03673 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002467 258.0
BYD2_k127_8806304_1 Arginyl tRNA synthetase N terminal dom K01887 - 6.1.1.19 0.0000000000000000000000000000000000000000000000000000000000007064 211.0
BYD2_k127_8806304_2 Sporulation related domain - - - 0.0000000000000000000000000000000007753 138.0
BYD2_k127_8806304_3 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.00000000000000002599 83.0
BYD2_k127_8808120_0 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001702 564.0
BYD2_k127_8808120_1 Thioredoxin K03672 - 1.8.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000001655 254.0
BYD2_k127_8808120_2 N-terminal domain of unknown function (DUF4140) - - - 0.000000000000000000000000000000000000000000000000002128 193.0
BYD2_k127_8808120_3 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000001878 177.0
BYD2_k127_8808120_4 Protein of unknown function (DUF3592) - - - 0.00000000000000000000000000000000000000005283 174.0
BYD2_k127_8808120_5 protein ubiquitination K10325,K12591 - - 0.00000000000000000000000000000000006745 154.0
BYD2_k127_8824367_0 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 0.0 1140.0
BYD2_k127_8824367_1 PFAM aminotransferase class I and II K00812 - 2.6.1.1 9.387e-223 695.0
BYD2_k127_8824367_2 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007778 591.0
BYD2_k127_8824367_3 PFAM Protein-tyrosine phosphatase, low molecular weight K01104 GO:0000271,GO:0003674,GO:0003824,GO:0004721,GO:0004725,GO:0005975,GO:0005976,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009242,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0033692,GO:0034637,GO:0034645,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044262,GO:0044264,GO:0044267,GO:0046377,GO:0071704,GO:0140096,GO:1901135,GO:1901137,GO:1901564,GO:1901576 3.1.3.48 0.00000000000000000000000000000000000000000000000000000000000000000000001469 244.0
BYD2_k127_8824367_4 translation initiation factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000008154 233.0
BYD2_k127_8824367_5 Sulfite exporter TauE/SafE - - - 0.00000000000000000000000000000000000000000000002792 179.0
BYD2_k127_8824367_6 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 0.0000000000000000000000004945 115.0
BYD2_k127_8831227_0 signal transduction protein containing a membrane domain an EAL and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004933 471.0
BYD2_k127_8831227_1 glyoxalase bleomycin resistance protein dioxygenase K06991 - - 0.00000000000000000000000000000000000000000000002307 173.0
BYD2_k127_8843057_0 Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4) K01433 - 3.5.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007915 509.0
BYD2_k127_8843057_1 serine-type endopeptidase activity K04772 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000235 506.0
BYD2_k127_8843057_2 Ammonium Transporter Family K03320 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006004 301.0
BYD2_k127_8843057_3 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.00000000000000000000000001222 110.0
BYD2_k127_8869585_0 SMART CBS domain containing protein K07182 - - 1.386e-235 744.0
BYD2_k127_8869585_1 pfkB family carbohydrate kinase K00852,K00856 - 2.7.1.15,2.7.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001678 547.0
BYD2_k127_8869585_2 Exonuclease K02342 - 2.7.7.7 0.000000000000000000000000000000000000000000000000000005493 208.0
BYD2_k127_8869585_3 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000000000006368 146.0
BYD2_k127_8884502_0 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01916,K01950 - 6.3.1.5,6.3.5.1 2.457e-267 831.0
BYD2_k127_8884502_1 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002992 544.0
BYD2_k127_8884502_10 ABC transporter - - - 0.0000000000007099 77.0
BYD2_k127_8884502_2 Transglycosylase SLT domain K08305 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000129 415.0
BYD2_k127_8884502_3 Smr domain - - - 0.00000000000000000000000000000000000000000000000000000000001458 211.0
BYD2_k127_8884502_4 NlpC/P60 family K19303 - - 0.000000000000000000000000000000000000000000000000000000056 199.0
BYD2_k127_8884502_5 Belongs to the P(II) protein family K04751 - - 0.0000000000000000000000000000000000000000000000000000001213 196.0
BYD2_k127_8884502_6 MlaD protein - - - 0.0000000000000000000000000000000000000000000000000000005097 204.0
BYD2_k127_8884502_7 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component K02066 - - 0.00000000000000000000000000000000000000000000003007 179.0
BYD2_k127_8884502_8 RmuC family K09760 - - 0.0000000000000000000000000000000000000000000003933 168.0
BYD2_k127_8884502_9 Bacterial type II and III secretion system protein - - - 0.00000000000000000000000000000000000008553 149.0
BYD2_k127_8889028_0 PFAM Haloacid dehalogenase domain protein hydrolase K01079 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 426.0
BYD2_k127_8889028_1 Patatin-like phospholipase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002438 360.0
BYD2_k127_8889028_2 PFAM deoxyribose-phosphate aldolase phospho-2-dehydro-3-deoxyheptonate aldolase K11645 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000399 241.0
BYD2_k127_8889028_3 PFAM Ion transport protein K10716 - - 0.000000000000000000000000000000000000000000000000000000000000000001036 237.0
BYD2_k127_8889028_4 - - - - 0.000000000000000000000000000000000000000000000000000000000000000007728 236.0
BYD2_k127_8889028_5 Regulatory protein MarR - - - 0.00000000000000000000000000000000000000000000000000000000000000002225 226.0
BYD2_k127_8889028_6 Hemerythrin HHE cation binding domain - - - 0.0000000000000000000000000000000000000000000000000000001141 199.0
BYD2_k127_8889028_7 DsrC like protein K11179 - - 0.0000000000000000000000000000000000000000000003309 168.0
BYD2_k127_8889028_8 Invasion gene expression up-regulator, SirB - - - 0.0000000000000000000000000000000000000000000006791 169.0
BYD2_k127_8889028_9 regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed - - - 0.000000000000000000007216 100.0
BYD2_k127_8965995_0 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 0.0 1106.0
BYD2_k127_8965995_1 Fumarate reductase flavoprotein C-term K00278 - 1.4.3.16 5.545e-224 701.0
BYD2_k127_8965995_2 PFAM peptidase S1 and S6 chymotrypsin Hap K04771 - 3.4.21.107 4.088e-200 639.0
BYD2_k127_8965995_3 PFAM Peptidase S24 S26A S26B, conserved region K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003258 428.0
BYD2_k127_8965995_4 MucB/RseB C-terminal domain K03598 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009683 362.0
BYD2_k127_8965995_5 TIGRFAM RNA polymerase sigma factor RpoE K03088 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003254 352.0
BYD2_k127_8965995_6 PFAM Anti sigma-E protein RseA family protein K03597 - - 0.0000000000000000000000000000000000000000000000001917 181.0
BYD2_k127_8965995_7 PFAM Positive regulator of sigma(E) RseC MucC K03803 - - 0.00000000000000000000000009327 113.0
BYD2_k127_8965995_8 Domain of unknown function (DUF4845) - - - 0.0000000000000000000000003319 109.0
BYD2_k127_9037515_0 extracellular solute-binding protein, family 5 K02035,K15584 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 406.0
BYD2_k127_9037515_1 PFAM binding-protein-dependent transport systems inner membrane component K02033 - - 0.00000000000000000000000000000000000000000000003542 181.0
BYD2_k127_9037515_2 PFAM binding-protein-dependent transport systems inner membrane component K02034 - - 0.000000000000000000000000000000000008875 147.0
BYD2_k127_995077_0 Collagenase K08303 - - 0.0 1052.0
BYD2_k127_995077_1 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287 - 1.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001701 269.0
BYD2_k127_995077_2 OmpA-like transmembrane domain K03286 - - 0.000000000000000000001336 100.0