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Overview

ID MAG00101
Name BYD3_bin.1
Sample SMP0003
Taxonomy
Kingdom Bacteria
Phylum Pseudomonadota
Class Gammaproteobacteria
Order Steroidobacterales
Family Steroidobacteraceae
Genus CADEED01
Species
Assembly information
Completeness (%) 91.11
Contamination (%) 4.72
GC content (%) 67.0
N50 (bp) 52,038
Genome size (bp) 4,898,686

Location

Module

Module ID Module name Total genes Total steps Contain genes Contain steps Percentage of genes Percentage of steps

Genes4154

Gene name Description KEGG GOs EC E-value Score Sequence
BYD3_k127_1020362_0 amino acids such as threonine, to avoid such errors, it has a posttransfer editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA-dependent manner K01873 - 6.1.1.9 0.0 1301.0
BYD3_k127_1020362_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K21134 - - 0.0 1142.0
BYD3_k127_1020362_10 PFAM Type II secretion system protein E - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009427 522.0
BYD3_k127_1020362_11 Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides K01255 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0016787,GO:0019538,GO:0019904,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0097718,GO:0140096,GO:1901564 3.4.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001162 485.0
BYD3_k127_1020362_12 Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr) K18979 GO:0003674,GO:0003824,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008616,GO:0009058,GO:0009116,GO:0009119,GO:0009163,GO:0009987,GO:0016491,GO:0018130,GO:0019438,GO:0034404,GO:0034641,GO:0034654,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046116,GO:0046483,GO:0052693,GO:0055086,GO:0055114,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 1.17.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008048 478.0
BYD3_k127_1020362_13 Major facilitator superfamily K06902 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 469.0
BYD3_k127_1020362_14 GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis K03665 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002442 470.0
BYD3_k127_1020362_15 Phosphoribosylformylglycinamidine cyclo-ligase K01933 - 6.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 459.0
BYD3_k127_1020362_16 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001473 480.0
BYD3_k127_1020362_17 PFAM Type II secretion system protein E K02669 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005673 462.0
BYD3_k127_1020362_18 Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration K17758,K17759 - 4.2.1.136,5.1.99.6 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000163 445.0
BYD3_k127_1020362_19 Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP K03593 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007374 419.0
BYD3_k127_1020362_2 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 9.105e-261 820.0
BYD3_k127_1020362_20 Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control K00970 - 2.7.7.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002264 419.0
BYD3_k127_1020362_21 Domain of unknown function (DUF3488) K22452 - 2.3.2.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005564 383.0
BYD3_k127_1020362_22 ATPase family associated with various cellular activities (AAA) K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007091 371.0
BYD3_k127_1020362_23 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis K01494 - 3.5.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 351.0
BYD3_k127_1020362_24 Cell wall hydrolase autolysin K01448 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001454 338.0
BYD3_k127_1020362_25 Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate K00606 GO:0000287,GO:0003674,GO:0003824,GO:0003864,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016740,GO:0016741,GO:0016742,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.1.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003175 330.0
BYD3_k127_1020362_26 ABC-type multidrug transport system, ATPase component K01990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009021 312.0
BYD3_k127_1020362_27 COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001718 315.0
BYD3_k127_1020362_28 Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate K01918 - 6.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003272 325.0
BYD3_k127_1020362_29 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697,K03692 - 2.4.1.15,2.4.1.213,2.4.1.347 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000137 318.0
BYD3_k127_1020362_3 Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP K02837 - - 7.679e-246 768.0
BYD3_k127_1020362_30 HflC and HflK could encode or regulate a protease K04088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 311.0
BYD3_k127_1020362_31 Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) K00791 - 2.5.1.75 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 311.0
BYD3_k127_1020362_32 Uracil DNA glycosylase superfamily K21929 - 3.2.2.27 0.000000000000000000000000000000000000000000000000000000000000000000000000001107 262.0
BYD3_k127_1020362_33 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K21136 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003441 265.0
BYD3_k127_1020362_34 Belongs to the WrbA family K03809 - 1.6.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000003773 255.0
BYD3_k127_1020362_35 COG1428 Deoxynucleoside kinases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003942 259.0
BYD3_k127_1020362_36 HflC and HflK could regulate a protease K04087 - - 0.000000000000000000000000000000000000000000000000000000000000000001286 241.0
BYD3_k127_1020362_37 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K17103 - 2.7.8.8 0.000000000000000000000000000000000000000000000000000000000000000001622 247.0
BYD3_k127_1020362_38 permease K07091 - - 0.000000000000000000000000000000000000000000000000000000000000000565 233.0
BYD3_k127_1020362_39 Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate K11175 - 2.1.2.2 0.00000000000000000000000000000000000000000000000000000000001245 219.0
BYD3_k127_1020362_4 Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Ala-tRNA(Pro). The misacylated Cys- tRNA(Pro) is not edited by ProRS K01881 GO:0002161,GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0043906,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 3.353e-228 734.0
BYD3_k127_1020362_40 Permease K11720 - - 0.000000000000000000000000000000000000000000000000000000002067 218.0
BYD3_k127_1020362_41 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000002378 214.0
BYD3_k127_1020362_42 Removes the phosphate from trehalose 6-phosphate to produce free trehalose K01087 GO:0000287,GO:0003674,GO:0003824,GO:0004805,GO:0005488,GO:0005975,GO:0005984,GO:0005991,GO:0005992,GO:0006793,GO:0006796,GO:0006950,GO:0006970,GO:0008150,GO:0008152,GO:0009058,GO:0009266,GO:0009311,GO:0009312,GO:0009409,GO:0009628,GO:0009987,GO:0016051,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019203,GO:0033554,GO:0034637,GO:0042578,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044262,GO:0046351,GO:0046872,GO:0050896,GO:0051716,GO:0070413,GO:0070415,GO:0070417,GO:0071704,GO:1901576 3.1.3.12 0.00000000000000000000000000000000000000000000000001699 190.0
BYD3_k127_1020362_43 Uncharacterized protein family UPF0016 - - - 0.0000000000000000000000000000000000000000001511 163.0
BYD3_k127_1020362_44 Bacterial dnaA protein K10763 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006275,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008156,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010556,GO:0010558,GO:0010605,GO:0016020,GO:0017076,GO:0019219,GO:0019222,GO:0030174,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032297,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0034645,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043531,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051052,GO:0051053,GO:0051171,GO:0051172,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090329,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363,GO:1901576,GO:2000104,GO:2000112,GO:2000113 - 0.00000000000000000000000000000000000000001398 168.0
BYD3_k127_1020362_45 Transglycosylase SLT domain - - - 0.0000000000000000000000000000000000000001259 163.0
BYD3_k127_1020362_46 - - - - 0.0000000000000000000000000000000000000004574 162.0
BYD3_k127_1020362_47 Ribosomal-protein-alanine acetyltransferase K03789 - 2.3.1.128 0.000000000000000000000000000000000000000891 163.0
BYD3_k127_1020362_48 transcriptional regulator - - - 0.000000000000000000000000000000000000002478 154.0
BYD3_k127_1020362_49 RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs K03666 - - 0.000000000000000000000000000000000003874 139.0
BYD3_k127_1020362_5 Glucoamylase and related glycosyl hydrolases - - - 6.275e-219 696.0
BYD3_k127_1020362_50 PFAM CDP-alcohol phosphatidyltransferase K08744 - 2.7.8.41 0.00000000000000000000000000000000002279 153.0
BYD3_k127_1020362_51 PFAM 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK K00950 - 2.7.6.3 0.0000000000000000000000000000000009942 147.0
BYD3_k127_1020362_52 Sulfotransferase family - - - 0.000000000000000000000000000000003669 139.0
BYD3_k127_1020362_54 Part of a membrane complex involved in electron transport K03616 - - 0.00000000000000000000000000001116 119.0
BYD3_k127_1020362_55 Threonylcarbamoyl adenosine biosynthesis protein TsaE K06925 - - 0.000000000000000000000000000537 132.0
BYD3_k127_1020362_56 COG2927 DNA polymerase III, chi subunit K02339 GO:0005575,GO:0005622,GO:0005623,GO:0006275,GO:0008150,GO:0009314,GO:0009360,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010556,GO:0010557,GO:0010604,GO:0019219,GO:0019222,GO:0030174,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032298,GO:0032991,GO:0042575,GO:0043846,GO:0043847,GO:0044424,GO:0044464,GO:0045740,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0060255,GO:0061695,GO:0065007,GO:0080090,GO:0090329,GO:1902494,GO:1990234,GO:2000105,GO:2000112 2.7.7.7 0.0000000000000000000000000006644 118.0
BYD3_k127_1020362_57 Glycosyltransferase Family 4 - - - 0.000000000000000000000002329 121.0
BYD3_k127_1020362_58 Belongs to the acylphosphatase family K01512 GO:0003674,GO:0003824,GO:0003998,GO:0016787,GO:0016817,GO:0016818 3.6.1.7 0.0000000000000000000004512 98.0
BYD3_k127_1020362_59 Domain of unknown function (DUF4340) - - - 0.0000000000000000000006108 112.0
BYD3_k127_1020362_6 serine threonine protein kinase K12132 - 2.7.11.1 1.166e-215 698.0
BYD3_k127_1020362_60 polysaccharide biosynthetic process - - - 0.0000000000000000001007 103.0
BYD3_k127_1020362_61 Thioesterase - - - 0.000000005943 63.0
BYD3_k127_1020362_62 Uncharacterized protein conserved in bacteria (DUF2066) K09938 - - 0.00001898 56.0
BYD3_k127_1020362_7 Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP K01939 - 6.3.4.4 1.413e-199 629.0
BYD3_k127_1020362_8 This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex K03572 GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002416 580.0
BYD3_k127_1020362_9 transport system involved in gliding motility, auxiliary component - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 547.0
BYD3_k127_1029264_0 COG1009 NADH ubiquinone oxidoreductase subunit 5 (chain L) Multisubunit Na H antiporter, MnhA subunit K05559 - - 0.0 1200.0
BYD3_k127_1029264_1 transmembrane transporter activity K18138 - - 3.315e-308 955.0
BYD3_k127_1029264_10 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00526 - 1.17.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000722 571.0
BYD3_k127_1029264_11 Ammonium transporter K03320 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005512 556.0
BYD3_k127_1029264_12 Subunit D of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05561 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006026 534.0
BYD3_k127_1029264_13 membrane K03760 - 2.7.8.43 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004616 496.0
BYD3_k127_1029264_14 7TMR-DISM extracellular 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001188 475.0
BYD3_k127_1029264_15 PFAM Formylglycine-generating sulfatase enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 449.0
BYD3_k127_1029264_16 DNA repair photolyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007924 408.0
BYD3_k127_1029264_17 Reductase C-terminal K00529 - 1.18.1.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005448 389.0
BYD3_k127_1029264_18 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002313 398.0
BYD3_k127_1029264_19 Diguanylate cyclase K21023 - 2.7.7.65 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008367 399.0
BYD3_k127_1029264_2 Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides K00525 - 1.17.4.1 1.863e-299 930.0
BYD3_k127_1029264_20 Zinc-binding dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003665 374.0
BYD3_k127_1029264_21 COG4775 Outer membrane protein protective antigen OMA87 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006719 381.0
BYD3_k127_1029264_22 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007057 371.0
BYD3_k127_1029264_23 regulatory protein LysR - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002673 364.0
BYD3_k127_1029264_24 PFAM sigma-54 factor interaction domain-containing protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003806 376.0
BYD3_k127_1029264_25 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000122 354.0
BYD3_k127_1029264_26 Transmembrane secretion effector - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004111 346.0
BYD3_k127_1029264_27 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003786 323.0
BYD3_k127_1029264_28 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 321.0
BYD3_k127_1029264_29 PFAM HTH transcriptional regulator, LysR K03717 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003029 306.0
BYD3_k127_1029264_3 Cytochrome c - - - 7.62e-297 934.0
BYD3_k127_1029264_30 Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity K01118 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007663 290.0
BYD3_k127_1029264_31 von Willebrand factor (VWF) type A domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009787 292.0
BYD3_k127_1029264_32 Secreted protein, containing von Willebrand factor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005823 287.0
BYD3_k127_1029264_33 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000004911 286.0
BYD3_k127_1029264_34 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001651 287.0
BYD3_k127_1029264_35 NADPH-dependent FMN reductase K19784 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001163 260.0
BYD3_k127_1029264_36 Lactoylglutathione lyase K01759 - 4.4.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000008671 246.0
BYD3_k127_1029264_37 Peptidase M56, BlaR1 - - - 0.0000000000000000000000000000000000000000000000000000000000000001016 243.0
BYD3_k127_1029264_38 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000002816 223.0
BYD3_k127_1029264_39 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000006354 221.0
BYD3_k127_1029264_4 Acetolactate synthase K01652 - 2.2.1.6 3.617e-289 909.0
BYD3_k127_1029264_40 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000001409 213.0
BYD3_k127_1029264_41 Belongs to the P(II) protein family K04751,K04752 - - 0.0000000000000000000000000000000000000000000000000004275 186.0
BYD3_k127_1029264_42 Nucleoside-diphosphate-sugar epimerases - - - 0.00000000000000000000000000000000000000000000000008199 187.0
BYD3_k127_1029264_43 branched-chain amino acid permease (azaleucine resistance) - - - 0.000000000000000000000000000000000000000000000000082 199.0
BYD3_k127_1029264_44 Subunit C of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05560 - - 0.000000000000000000000000000000000000000000001854 166.0
BYD3_k127_1029264_45 - - - - 0.00000000000000000000000000000000000000000007012 169.0
BYD3_k127_1029264_46 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000006215 169.0
BYD3_k127_1029264_47 ACT domain K01653 GO:0003674,GO:0003824,GO:0003984,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005948,GO:0006082,GO:0006520,GO:0006549,GO:0006573,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009097,GO:0009099,GO:0009987,GO:0016053,GO:0016740,GO:0016744,GO:0019752,GO:0032991,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494,GO:1990234 2.2.1.6 0.00000000000000000000000000000000000000002286 158.0
BYD3_k127_1029264_48 Na+/H+ ion antiporter subunit K05562 - - 0.000000000000000000000000000000000000007054 151.0
BYD3_k127_1029264_49 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000002834 166.0
BYD3_k127_1029264_5 peptidase S9 - - - 8.8e-265 838.0
BYD3_k127_1029264_50 DoxX K15977 - - 0.00000000000000000000000000000000000005643 148.0
BYD3_k127_1029264_51 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000002495 139.0
BYD3_k127_1029264_52 Putative DNA-binding domain - - - 0.0000000000000000000000000000000006382 141.0
BYD3_k127_1029264_53 Protein tyrosine kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000001934 147.0
BYD3_k127_1029264_54 Monovalent cation proton antiporter subunit MnhG PhaG K05564 - - 0.0000000000000000000000000000005722 130.0
BYD3_k127_1029264_55 aminopeptidase activity - - - 0.000000000000000000000000000001611 128.0
BYD3_k127_1029264_56 Subunit F of antiporter complex involved in resistance to high concentrations of Na , K , Li and or alkali K05563 - - 0.000000000000000000000000000001865 131.0
BYD3_k127_1029264_57 COG0791 Cell wall-associated hydrolases (invasion-associated proteins) K01183,K13695,K19303 GO:0000270,GO:0003674,GO:0003824,GO:0004175,GO:0006022,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009254,GO:0016787,GO:0019538,GO:0030203,GO:0043170,GO:0044238,GO:0070011,GO:0071704,GO:0140096,GO:1901135,GO:1901564 3.2.1.14 0.00000000000000000000000000002869 125.0
BYD3_k127_1029264_58 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus K03624,K06140 - - 0.000000000000000000000001388 119.0
BYD3_k127_1029264_59 Mannose-6-phosphate isomerase K00971,K16011 - 2.7.7.13,5.3.1.8 0.00000000000000000001532 98.0
BYD3_k127_1029264_6 PFAM RNA polymerase sigma factor 54, interaction - - - 1.1e-218 697.0
BYD3_k127_1029264_60 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000001933 90.0
BYD3_k127_1029264_61 - - - - 0.00000000000000001459 97.0
BYD3_k127_1029264_62 DNA-templated transcription, initiation K03088,K03091 - - 0.000000000000003334 86.0
BYD3_k127_1029264_63 Predicted integral membrane protein (DUF2282) - - - 0.000000000000008303 78.0
BYD3_k127_1029264_64 Branched-chain amino acid transport protein (AzlD) - - - 0.000000000009297 77.0
BYD3_k127_1029264_65 Signal peptide protein - GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005488,GO:0005575,GO:0005618,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0030312,GO:0044424,GO:0044444,GO:0044464,GO:0071944,GO:0097159,GO:1901363 - 0.00000000001987 77.0
BYD3_k127_1029264_66 PFAM Integral membrane protein TerC K05794 - - 0.00000000002255 68.0
BYD3_k127_1029264_67 Universal stress protein family - - - 0.00000000005878 73.0
BYD3_k127_1029264_69 FecR protein K07165 - - 0.000000001009 71.0
BYD3_k127_1029264_7 Patatin-like phospholipase - - - 9.93e-216 689.0
BYD3_k127_1029264_70 - - - - 0.00000001554 66.0
BYD3_k127_1029264_71 Alpha beta hydrolase - - - 0.00000004884 64.0
BYD3_k127_1029264_72 - - - - 0.0000006634 61.0
BYD3_k127_1029264_73 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.00000302 52.0
BYD3_k127_1029264_74 Peptidase M56, BlaR1 - - - 0.000004261 58.0
BYD3_k127_1029264_75 BlaR1 peptidase M56 - - - 0.0000271 55.0
BYD3_k127_1029264_76 trisaccharide binding - - - 0.0004055 49.0
BYD3_k127_1029264_77 Inner membrane component of T3SS, cytoplasmic domain - - - 0.0006157 52.0
BYD3_k127_1029264_8 Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA K01754 - 4.3.1.19 2.189e-212 671.0
BYD3_k127_1029264_9 Bacterial protein of unknown function (DUF885) - - - 9.107e-195 631.0
BYD3_k127_1255037_0 Trehalose utilisation - - - 5e-324 1015.0
BYD3_k127_1255037_1 PEP-utilising enzyme, mobile domain K01007 - 2.7.9.2 2.2e-302 939.0
BYD3_k127_1255037_10 One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity K02886 GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000473 382.0
BYD3_k127_1255037_11 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 357.0
BYD3_k127_1255037_12 Methyltransferase type 11 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 306.0
BYD3_k127_1255037_13 ChrR Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006914 299.0
BYD3_k127_1255037_14 Haloacid dehalogenase-like hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001708 294.0
BYD3_k127_1255037_15 One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit K02906 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000612 285.0
BYD3_k127_1255037_16 Uroporphyrinogen-III synthase HemD - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000268 279.0
BYD3_k127_1255037_17 Forms part of the polypeptide exit tunnel K02926 GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003700,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0005844,GO:0006355,GO:0006412,GO:0006417,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008428,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0015934,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030234,GO:0030371,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032069,GO:0032074,GO:0032268,GO:0032269,GO:0032991,GO:0032993,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042788,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051336,GO:0051346,GO:0060255,GO:0060698,GO:0060699,GO:0060700,GO:0060701,GO:0060702,GO:0065003,GO:0065007,GO:0065009,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0098772,GO:0140110,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000007494 241.0
BYD3_k127_1255037_18 Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA K02965 GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000001591 162.0
BYD3_k127_1255037_19 The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome K02890 - - 0.00000000000000000000000000000000000000001038 155.0
BYD3_k127_1255037_2 kinase domain - - - 7.425e-242 760.0
BYD3_k127_1255037_20 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000001578 148.0
BYD3_k127_1255037_21 One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome K02892 - - 0.000000000000000000008952 98.0
BYD3_k127_1255037_3 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 1.073e-241 761.0
BYD3_k127_1255037_4 Conserved carboxylase domain K01571 - 4.1.1.3 1.068e-221 697.0
BYD3_k127_1255037_5 An AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism K01961 - 6.3.4.14,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003627 617.0
BYD3_k127_1255037_6 Belongs to the D-alanine--D-alanine ligase family K01921 - 6.3.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002715 464.0
BYD3_k127_1255037_7 Formate/nitrite transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007944 441.0
BYD3_k127_1255037_8 Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate K01007 - 2.7.9.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001812 421.0
BYD3_k127_1255037_9 PFAM Xylose isomerase-like TIM barrel K01816 - 5.3.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 408.0
BYD3_k127_1341829_0 PrpF protein K16514 GO:0003674,GO:0003824,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0009056,GO:0009987,GO:0016054,GO:0016853,GO:0016860,GO:0016863,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0042537,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 5.3.2.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001388 428.0
BYD3_k127_1341829_1 Amidohydrolase K10221 - 3.1.1.57 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004794 420.0
BYD3_k127_1341829_2 Aldolase/RraA K10218 - 4.1.3.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005242 302.0
BYD3_k127_1341829_3 Domain of unknown function (DUF1932) K00020 - 1.1.1.31 0.0000000000000000000000000000000000000000000000000000000000000000001294 239.0
BYD3_k127_1341829_4 siderophore transport K02014 - - 0.000000000000000000001193 96.0
BYD3_k127_1342265_0 receptor - - - 0.0 1243.0
BYD3_k127_1342265_1 X-Pro dipeptidyl-peptidase domain protein K06978 - - 0.0 1035.0
BYD3_k127_1342265_10 Belongs to the glycosyl hydrolase 43 family K06113 - 3.2.1.99 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 583.0
BYD3_k127_1342265_11 PFAM Major Facilitator Superfamily K08191 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006058 566.0
BYD3_k127_1342265_12 Flavin containing amine oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 548.0
BYD3_k127_1342265_13 PFAM Cyclopropane-fatty-acyl-phospholipid synthase K00574 - 2.1.1.79 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001467 535.0
BYD3_k127_1342265_14 Winged helix DNA-binding domain K09927 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006745 502.0
BYD3_k127_1342265_15 Tannase and feruloyl esterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006524 509.0
BYD3_k127_1342265_16 Putative esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009142 483.0
BYD3_k127_1342265_17 Arginase family K01476 - 3.5.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006724 461.0
BYD3_k127_1342265_18 Alpha beta hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 455.0
BYD3_k127_1342265_19 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 449.0
BYD3_k127_1342265_2 TonB-dependent receptor K02014 - - 4.137e-313 989.0
BYD3_k127_1342265_20 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008432 445.0
BYD3_k127_1342265_21 Mycolic acid cyclopropane synthetase K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005572 443.0
BYD3_k127_1342265_22 alpha/beta hydrolase fold K01561 - 3.8.1.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 417.0
BYD3_k127_1342265_23 Belongs to the peptidase S1C family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000313 413.0
BYD3_k127_1342265_24 helix_turn_helix, arabinose operon control protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004158 403.0
BYD3_k127_1342265_25 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008271 391.0
BYD3_k127_1342265_26 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001318 383.0
BYD3_k127_1342265_27 AMP-binding enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000862 378.0
BYD3_k127_1342265_28 NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 359.0
BYD3_k127_1342265_29 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) K13924 - 2.1.1.80,3.1.1.61 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001813 359.0
BYD3_k127_1342265_3 Belongs to the glycosyl hydrolase 43 family K01198 - 3.2.1.37 3.164e-294 931.0
BYD3_k127_1342265_30 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001073 351.0
BYD3_k127_1342265_31 Protein of unknown function (DUF1365) K09701 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001402 337.0
BYD3_k127_1342265_32 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001273 323.0
BYD3_k127_1342265_33 HipA-like C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002002 319.0
BYD3_k127_1342265_34 Transglycosylase SLT domain K08305 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004642 314.0
BYD3_k127_1342265_35 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000703 318.0
BYD3_k127_1342265_36 Enoyl-(Acyl carrier protein) reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 307.0
BYD3_k127_1342265_37 Predicted Zn-dependent protease (DUF2268) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 297.0
BYD3_k127_1342265_38 Phospholipid methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 289.0
BYD3_k127_1342265_39 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000258 285.0
BYD3_k127_1342265_4 Tryptophan halogenase - - - 1.109e-286 886.0
BYD3_k127_1342265_40 Domain of unknown function (DUF4397) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001541 286.0
BYD3_k127_1342265_41 Iron-containing redox enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000006281 265.0
BYD3_k127_1342265_42 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005169 258.0
BYD3_k127_1342265_43 Peptidase family S41 K03797 - 3.4.21.102 0.000000000000000000000000000000000000000000000000000000000000000000000000007727 267.0
BYD3_k127_1342265_44 PilT protein domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002355 256.0
BYD3_k127_1342265_45 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001433 257.0
BYD3_k127_1342265_46 SapC - - - 0.000000000000000000000000000000000000000000000000000000000000000000002061 243.0
BYD3_k127_1342265_47 cephalosporin-C deacetylase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000003243 245.0
BYD3_k127_1342265_48 Outer Membrane Lipoprotein K03098 - - 0.00000000000000000000000000000000000000000000000000000000000005676 218.0
BYD3_k127_1342265_49 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000006551 230.0
BYD3_k127_1342265_5 TonB dependent receptor K02014 - - 1.418e-273 876.0
BYD3_k127_1342265_50 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000000000000000000000003818 198.0
BYD3_k127_1342265_51 3-demethylubiquinone-9 3-methyltransferase K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000005903 192.0
BYD3_k127_1342265_52 lipid A phosphoethanolamine transferase, associated with polymyxin resistance K03760 - 2.7.8.43 0.0000000000000000000000000000000000000000000000000008429 203.0
BYD3_k127_1342265_53 - - - - 0.0000000000000000000000000000000000000000000000006238 179.0
BYD3_k127_1342265_54 Protein of unknown function (DUF1272) K09984 - - 0.00000000000000000000000000000000000000000000003134 171.0
BYD3_k127_1342265_55 3-demethylubiquinone-9 3-methyltransferase - - - 0.00000000000000000000000000000000000000000000187 169.0
BYD3_k127_1342265_56 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000002591 177.0
BYD3_k127_1342265_57 Transcriptional regulator - - - 0.00000000000000000000000000000000000000003896 160.0
BYD3_k127_1342265_58 Domain of unknown function (DUF4136) - - - 0.0000000000000000000000000000000000000004573 154.0
BYD3_k127_1342265_59 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000002384 149.0
BYD3_k127_1342265_6 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 2.713e-215 685.0
BYD3_k127_1342265_60 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000002387 148.0
BYD3_k127_1342265_61 - - - - 0.000000000000000000000000000000000001018 150.0
BYD3_k127_1342265_62 Acid phosphatase homologues K12978 - - 0.0000000000000000000000000000000003197 141.0
BYD3_k127_1342265_63 lactoylglutathione lyase activity - - - 0.00000000000000000000000000000001001 130.0
BYD3_k127_1342265_64 Thermostable hemolysin - - - 0.000000000000000000000000000002627 128.0
BYD3_k127_1342265_65 Acid phosphatase homologues K12978 - - 0.000000000000000000000000000234 130.0
BYD3_k127_1342265_66 PFAM RNP-1 like RNA-binding protein - - - 0.000000000000000000000000004073 113.0
BYD3_k127_1342265_67 Protein of unknown function (DUF2878) - - - 0.000000000000000000000001516 119.0
BYD3_k127_1342265_68 Protein of unknown function (DUF2004) - - - 0.00000000000000006616 87.0
BYD3_k127_1342265_69 LytTr DNA-binding domain K02477 - - 0.000000000000001664 87.0
BYD3_k127_1342265_7 receptor - - - 9.861e-206 682.0
BYD3_k127_1342265_70 PAS domain - - - 0.000000000000004932 81.0
BYD3_k127_1342265_71 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.00000001102 62.0
BYD3_k127_1342265_72 K COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit - - - 0.0000003328 58.0
BYD3_k127_1342265_73 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.00001791 49.0
BYD3_k127_1342265_8 Alpha-L-arabinofuranosidase K01209 - 3.2.1.55 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006009 609.0
BYD3_k127_1342265_9 Sulfatase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000301 610.0
BYD3_k127_139144_0 DNA polymerase III alpha subunit K02337 - 2.7.7.7 0.0 1317.0
BYD3_k127_139144_1 Peptidase M16 - - - 0.0 1123.0
BYD3_k127_139144_10 Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K00748 GO:0003674,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0019637,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 418.0
BYD3_k127_139144_11 TIGRFAM methionine aminopeptidase, type I K01265 - 3.4.11.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004622 391.0
BYD3_k127_139144_12 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001851 395.0
BYD3_k127_139144_13 zinc metalloprotease K11749 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000118 371.0
BYD3_k127_139144_14 Catalyzes the reversible phosphorylation of UMP to UDP K09903 - 2.7.4.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005653 342.0
BYD3_k127_139144_15 Belongs to the universal ribosomal protein uS2 family K02967 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001268 342.0
BYD3_k127_139144_16 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003116 332.0
BYD3_k127_139144_17 Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K02536 - 2.3.1.191 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007565 331.0
BYD3_k127_139144_18 Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates K03787 GO:0003674,GO:0003824,GO:0004309,GO:0005488,GO:0005515,GO:0006139,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008253,GO:0008254,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009125,GO:0009129,GO:0009131,GO:0009158,GO:0009161,GO:0009164,GO:0009166,GO:0009173,GO:0009175,GO:0009218,GO:0009222,GO:0009259,GO:0009261,GO:0009987,GO:0016311,GO:0016462,GO:0016787,GO:0016788,GO:0016791,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0030145,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042578,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046049,GO:0046050,GO:0046131,GO:0046133,GO:0046135,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046914,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.1.3.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001173 316.0
BYD3_k127_139144_19 Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome K02357 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000005115 294.0
BYD3_k127_139144_2 Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates K01937 - 6.3.4.2 1.861e-252 790.0
BYD3_k127_139144_20 Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di-trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide K00806 - 2.5.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001337 293.0
BYD3_k127_139144_21 Responsible for synthesis of pseudouridine from uracil- 13 in transfer RNAs K06176 - 5.4.99.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000006817 298.0
BYD3_k127_139144_22 Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins K00573 - 2.1.1.77 0.000000000000000000000000000000000000000000000000000000000000000000000000000008276 270.0
BYD3_k127_139144_23 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine K04075 - 6.3.4.19 0.0000000000000000000000000000000000000000000000000000000000000000000000009939 275.0
BYD3_k127_139144_24 Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another K02838 GO:0002181,GO:0002184,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006415,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022411,GO:0032984,GO:0034641,GO:0034645,GO:0043021,GO:0043023,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000000007093 246.0
BYD3_k127_139144_25 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000002771 233.0
BYD3_k127_139144_26 AraC family transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000001938 229.0
BYD3_k127_139144_27 Endonuclease that specifically degrades the RNA of RNA- DNA hybrids K03470 - 3.1.26.4 0.000000000000000000000000000000000000000000000000000000000000004909 224.0
BYD3_k127_139144_28 Domain of unknown function (DU1801) - - - 0.000000000000000000000000000000000000000000000000000000000000006173 218.0
BYD3_k127_139144_29 Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) K00991 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0042802,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0050518,GO:0070567,GO:0071704,GO:1901576 2.7.7.60 0.00000000000000000000000000000000000000000000000000000000000075 217.0
BYD3_k127_139144_3 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K07277 - - 1.617e-195 638.0
BYD3_k127_139144_30 Glyoxalase-like domain - - - 0.00000000000000000000000000000000000000000000000000000005576 207.0
BYD3_k127_139144_31 Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) K01770 - 4.6.1.12 0.00000000000000000000000000000000000000000000000000000006238 209.0
BYD3_k127_139144_32 Enoyl-CoA hydratase/isomerase - - - 0.00000000000000000000000000000000000000000000000000001939 205.0
BYD3_k127_139144_33 Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs K02372 - 4.2.1.59 0.000000000000000000000000000000000000000000000000003546 186.0
BYD3_k127_139144_34 Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000005012 181.0
BYD3_k127_139144_35 RDD family - - - 0.0000000000000000000000000000000000000000000000003627 179.0
BYD3_k127_139144_36 Belongs to the CDS family K00981 GO:0003674,GO:0003824,GO:0004605,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006220,GO:0006221,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009117,GO:0009165,GO:0009987,GO:0016020,GO:0016024,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044271,GO:0044281,GO:0044464,GO:0045017,GO:0046341,GO:0046471,GO:0046474,GO:0046483,GO:0046486,GO:0055086,GO:0070567,GO:0071704,GO:0071944,GO:0072527,GO:0072528,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.7.41 0.0000000000000000000000000000000000000000001788 173.0
BYD3_k127_139144_37 protein conserved in bacteria - - - 0.00000000000000000000000000000000001866 143.0
BYD3_k127_139144_38 Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family - - - 0.0000000000000000000000000000001197 134.0
BYD3_k127_139144_39 - - - - 0.000000000000000000000000000007299 121.0
BYD3_k127_139144_4 DHH family K07462 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008297,GO:0008409,GO:0009314,GO:0009628,GO:0009987,GO:0010165,GO:0010212,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0035312,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0045145,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001344 610.0
BYD3_k127_139144_40 Acetyltransferase (GNAT) domain K03829 - - 0.0000000000000000000000000001502 121.0
BYD3_k127_139144_41 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000013 113.0
BYD3_k127_139144_42 Protein of unknown function (DUF498/DUF598) - - - 0.0000000000000000000000006451 109.0
BYD3_k127_139144_43 Belongs to the skp family K06142 - - 0.00000000000000000000000234 109.0
BYD3_k127_139144_44 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K05589 - - 0.000000000000000000005643 96.0
BYD3_k127_139144_45 Antibiotic biosynthesis monooxygenase - - - 0.0000000000000000009579 96.0
BYD3_k127_139144_46 Antitoxin component of a toxin-antitoxin (TA) module - - - 0.00000000000000003474 83.0
BYD3_k127_139144_47 Gamma-glutamyl cyclotransferase, AIG2-like - - - 0.000000000000008112 78.0
BYD3_k127_139144_49 Protein conserved in bacteria - - - 0.00000002243 65.0
BYD3_k127_139144_5 Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis K01689 GO:0000015,GO:0000287,GO:0003674,GO:0003824,GO:0004634,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009986,GO:0009987,GO:0016052,GO:0016053,GO:0016310,GO:0016829,GO:0016835,GO:0016836,GO:0017144,GO:0018130,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0032991,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042802,GO:0042866,GO:0043167,GO:0043169,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046872,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1902494 4.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 602.0
BYD3_k127_139144_6 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 485.0
BYD3_k127_139144_7 Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA K01962 - 2.1.3.15,6.4.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 453.0
BYD3_k127_139144_8 Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) K00099 - 1.1.1.267 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001353 464.0
BYD3_k127_139144_9 3-deoxy-D-manno-octulosonic acid 8-phosphate synthase K01627 - 2.5.1.55 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003572 430.0
BYD3_k127_1395686_0 Peptidase family M3 K01414 - 3.4.24.70 2.331e-217 694.0
BYD3_k127_1395686_1 PFAM ABC transporter K06158 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002291 556.0
BYD3_k127_1395686_10 Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA) K00014 - 1.1.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000005662 287.0
BYD3_k127_1395686_11 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001552 261.0
BYD3_k127_1395686_12 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000177 265.0
BYD3_k127_1395686_13 D-alanyl-D-alanine carboxypeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000002999 221.0
BYD3_k127_1395686_14 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.0000000000000000000000000000000000000000000000000000003871 202.0
BYD3_k127_1395686_15 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.0000000000000000000000000000000000000000000001921 171.0
BYD3_k127_1395686_16 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000008673 172.0
BYD3_k127_1395686_17 MlaD protein K02067,K06192 - - 0.0000000000000000000000000000000000000000004468 170.0
BYD3_k127_1395686_18 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000164 156.0
BYD3_k127_1395686_19 PFAM DoxX family protein K15977 - - 0.00000000000000000000000000000000001745 143.0
BYD3_k127_1395686_2 Acyl-CoA dehydrogenases K06445 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004476 532.0
BYD3_k127_1395686_20 - K01992 - - 0.0000000000000000000000000000000028 141.0
BYD3_k127_1395686_21 Type II and III secretion system protein K02453 - - 0.000000000000000000000000161 115.0
BYD3_k127_1395686_22 biotin lipoate A B protein ligase K03524 - 6.3.4.15 0.000000000003667 77.0
BYD3_k127_1395686_23 ABC transporter K18480 - - 0.00000002884 63.0
BYD3_k127_1395686_24 Protein of unknown function (DUF3379) - - - 0.00001253 56.0
BYD3_k127_1395686_25 - - - - 0.0002567 53.0
BYD3_k127_1395686_3 Catalyzes the reversible oxidation of malate to oxaloacetate K00024 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0006107,GO:0006108,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006734,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009060,GO:0009117,GO:0009987,GO:0015980,GO:0016491,GO:0016614,GO:0016615,GO:0016616,GO:0016999,GO:0017144,GO:0019362,GO:0019637,GO:0019674,GO:0019752,GO:0030060,GO:0034641,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044464,GO:0045333,GO:0046483,GO:0046496,GO:0051186,GO:0055086,GO:0055114,GO:0071704,GO:0072350,GO:0072524,GO:1901360,GO:1901564 1.1.1.37 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001516 475.0
BYD3_k127_1395686_4 sensor diguanylate cyclase phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002846 447.0
BYD3_k127_1395686_5 PLD-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004556 388.0
BYD3_k127_1395686_6 abc transporter atp-binding protein K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004177 372.0
BYD3_k127_1395686_7 ATPases associated with a variety of cellular activities K02065 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004474 306.0
BYD3_k127_1395686_8 Exodeoxyribonuclease III xth K01142 - 3.1.11.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003027 327.0
BYD3_k127_1395686_9 LysR substrate binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001651 291.0
BYD3_k127_1424599_0 Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) K00937 - 2.7.4.1 6.204e-261 831.0
BYD3_k127_1424599_1 Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) K01866 - 6.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003346 545.0
BYD3_k127_1424599_2 Belongs to the GppA Ppx family K01524 - 3.6.1.11,3.6.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002892 471.0
BYD3_k127_1424599_3 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002424 353.0
BYD3_k127_1424599_4 Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily K02015 - - 0.000000000000000000000000000000000000000000000000000000000000000000000004472 264.0
BYD3_k127_1424599_5 Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage K08311 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006401,GO:0006402,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010468,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0016070,GO:0016071,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0019219,GO:0019222,GO:0019439,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0033554,GO:0034353,GO:0034641,GO:0034655,GO:0043167,GO:0043169,GO:0043170,GO:0043487,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0045935,GO:0046483,GO:0046700,GO:0046872,GO:0048518,GO:0048519,GO:0048522,GO:0050779,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000663 203.0
BYD3_k127_1424599_6 Iron--sulfur cluster insertion protein erpA K15724 - - 0.000000000000000000000000000000000000000000000005698 175.0
BYD3_k127_1424599_7 cell shape determination - - - 0.00000000000000000000000000001806 122.0
BYD3_k127_1424599_8 - - - - 0.00000000000000004038 91.0
BYD3_k127_1424599_9 - - - - 0.000001358 55.0
BYD3_k127_1478691_0 Large extracellular alpha-helical protein K06894 - - 0.0 1527.0
BYD3_k127_1478691_1 TIGRFAM RNA helicase, ATP-dependent DEAH box, HrpA type K03578 - 3.6.4.13 0.0 1467.0
BYD3_k127_1478691_10 Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position K00700 - 2.4.1.18 1.989e-248 822.0
BYD3_k127_1478691_100 Peptidase family M23 - - - 0.000000000000000000000000000000000000000000000000000000174 199.0
BYD3_k127_1478691_101 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02194 - - 0.000000000000000000000000000000000000000000000000000005218 203.0
BYD3_k127_1478691_102 Belongs to the Nudix hydrolase family. NudJ subfamily - - - 0.0000000000000000000000000000000000000000000000000001088 190.0
BYD3_k127_1478691_103 PFAM alpha beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000009074 192.0
BYD3_k127_1478691_104 Belongs to the CDP-alcohol phosphatidyltransferase class-I family K00995,K08744 - 2.7.8.41,2.7.8.5 0.00000000000000000000000000000000000000000000000001028 187.0
BYD3_k127_1478691_105 general secretion pathway protein G K02456 - - 0.00000000000000000000000000000000000000000000000002556 184.0
BYD3_k127_1478691_106 PilZ domain K02676 - - 0.0000000000000000000000000000000000000000000000008892 177.0
BYD3_k127_1478691_107 Amino-transferase class IV K02619 GO:0003674,GO:0003824,GO:0005488,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008696,GO:0009987,GO:0016829,GO:0016830,GO:0016833,GO:0019752,GO:0019842,GO:0030170,GO:0034641,GO:0036094,GO:0042558,GO:0043167,GO:0043168,GO:0043436,GO:0043603,GO:0044237,GO:0044281,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0097159,GO:1901360,GO:1901363,GO:1901564 4.1.3.38 0.000000000000000000000000000000000000000000000002329 184.0
BYD3_k127_1478691_108 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes - - - 0.00000000000000000000000000000000000000000000009932 178.0
BYD3_k127_1478691_109 once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system K02193 - 3.6.3.41 0.0000000000000000000000000000000000000000000001108 177.0
BYD3_k127_1478691_11 Elongator protein 3, MiaB family, Radical SAM - - - 1.201e-241 769.0
BYD3_k127_1478691_110 Thiol disulfide interchange protein K02199 - - 0.0000000000000000000000000000000000000000000001589 191.0
BYD3_k127_1478691_111 TonB dependent biopolymer transporter integral cytoplasmic membrane subunit, working with ExbB K03559 - - 0.00000000000000000000000000000000000000000003583 164.0
BYD3_k127_1478691_112 Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH K02197 GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006464,GO:0006807,GO:0006810,GO:0008150,GO:0008152,GO:0009897,GO:0009986,GO:0009987,GO:0015886,GO:0016020,GO:0016043,GO:0017003,GO:0017004,GO:0017006,GO:0018063,GO:0019538,GO:0020037,GO:0022607,GO:0031224,GO:0031226,GO:0031233,GO:0031237,GO:0034622,GO:0036211,GO:0043170,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044425,GO:0044459,GO:0044464,GO:0046906,GO:0048037,GO:0051179,GO:0051181,GO:0051234,GO:0065003,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097159,GO:0098552,GO:0098567,GO:1901363,GO:1901564,GO:1901678 - 0.00000000000000000000000000000000000000001202 161.0
BYD3_k127_1478691_113 DNA polymerase III, delta' K02341 - 2.7.7.7 0.00000000000000000000000000000000000000001764 169.0
BYD3_k127_1478691_114 COG3156 Type II secretory pathway, component PulK K02460 - - 0.00000000000000000000000000000000000000001796 166.0
BYD3_k127_1478691_115 PFAM Glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000000000003084 156.0
BYD3_k127_1478691_116 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000002153 160.0
BYD3_k127_1478691_117 - - - - 0.0000000000000000000000000000000000005368 157.0
BYD3_k127_1478691_118 Transcriptional regulator ArsR family - - - 0.000000000000000000000000000000000001212 143.0
BYD3_k127_1478691_119 ExbD is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane. InterPro Biopolymer transport protein ExbD TolR Pfam Biopolymer transport protein ExbD TolR no signal peptide K03559 - - 0.000000000000000000000000000000000006029 140.0
BYD3_k127_1478691_12 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) K01214 - 3.2.1.68 5.201e-227 732.0
BYD3_k127_1478691_120 TraB family - - - 0.00000000000000000000000000000000009568 147.0
BYD3_k127_1478691_121 Protein of unknown function DUF45 K07043 - - 0.0000000000000000000000000000000001195 150.0
BYD3_k127_1478691_122 involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02461 - - 0.0000000000000000000000000000000006892 145.0
BYD3_k127_1478691_123 helix_turn_helix, Arsenical Resistance Operon Repressor K03892 - - 0.000000000000000000000000000000005176 132.0
BYD3_k127_1478691_124 Rhs_assc_core RHS repeat-associated core domain protein - - - 0.00000000000000000000000000000002014 151.0
BYD3_k127_1478691_125 Rhomboid family - - - 0.0000000000000000000000000000006932 129.0
BYD3_k127_1478691_126 MobA-like NTP transferase domain K07141 - 2.7.7.76 0.000000000000000000000000000002373 128.0
BYD3_k127_1478691_127 Carrier of the growing fatty acid chain in fatty acid biosynthesis K02078 GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008289,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0050896,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - 0.0000000000000000000000000002713 117.0
BYD3_k127_1478691_128 Outer membrane lipoprotein - - - 0.0000000000000000000000000008609 121.0
BYD3_k127_1478691_129 Low molecular weight phosphotyrosine protein phosphatase K03741 - 1.20.4.1 0.00000000000000000000000002095 115.0
BYD3_k127_1478691_13 TIGRFAM cytochrome c-type biogenesis protein CcmF K02198 - - 5.466e-221 706.0
BYD3_k127_1478691_130 Cytochrome C biogenesis K02200 - - 0.00000000000000000000000003834 123.0
BYD3_k127_1478691_131 Type II secretion system (T2SS), protein J K02459 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0098776 - 0.000000000000000000000001667 112.0
BYD3_k127_1478691_132 haloacid dehalogenase-like hydrolase - - - 0.000000000000000000000008867 109.0
BYD3_k127_1478691_133 subunit of a heme lyase K02200 - - 0.00000000000000000000008317 106.0
BYD3_k127_1478691_134 MTH538 TIR-like domain (DUF1863) - - - 0.00000000000000000001446 97.0
BYD3_k127_1478691_135 protein acetylation - - - 0.00000000000000000004118 98.0
BYD3_k127_1478691_136 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000001597 98.0
BYD3_k127_1478691_137 type II secretion system protein K12511 - - 0.000000000000000006617 93.0
BYD3_k127_1478691_138 Type II secretion system (T2SS), protein I - - - 0.000000000000000006635 96.0
BYD3_k127_1478691_139 general secretion pathway protein h K02457 GO:0002790,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0042886,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0071702,GO:0071705 - 0.0000000000000002873 89.0
BYD3_k127_1478691_14 Aldehyde dehydrogenase family K00140 - 1.2.1.18,1.2.1.27 1.448e-216 682.0
BYD3_k127_1478691_140 - - - - 0.000000000000007003 83.0
BYD3_k127_1478691_142 helix_turn_helix, Lux Regulon - - - 0.0000000000002341 76.0
BYD3_k127_1478691_143 - - - - 0.0000000000006311 71.0
BYD3_k127_1478691_144 Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins K02462 - - 0.000000000002652 73.0
BYD3_k127_1478691_145 - - - - 0.0000000004843 72.0
BYD3_k127_1478691_146 PFAM TPR repeat-containing protein - - - 0.0000000005022 72.0
BYD3_k127_1478691_149 - - - - 0.0004135 46.0
BYD3_k127_1478691_15 DNA/RNA non-specific endonuclease - - - 2.252e-208 686.0
BYD3_k127_1478691_150 Propeptide PepSY amd peptidase M4 - - - 0.0005731 50.0
BYD3_k127_1478691_16 belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 6.658e-208 670.0
BYD3_k127_1478691_17 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01703 - 4.2.1.33,4.2.1.35 1.377e-203 642.0
BYD3_k127_1478691_18 PFAM 3-hydroxyacyl-CoA dehydrogenase K01782 - 1.1.1.35,4.2.1.17,5.1.2.3 7.66e-203 651.0
BYD3_k127_1478691_19 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 2.534e-195 621.0
BYD3_k127_1478691_2 RHS Repeat - - - 0.0 1404.0
BYD3_k127_1478691_20 response regulator - - - 8.575e-194 644.0
BYD3_k127_1478691_21 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision K03703 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001221 619.0
BYD3_k127_1478691_22 A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit contributes ATPase, 3'-5' helicase, exonuclease activity and loads RecA onto ssDNA K03582 - 3.1.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 654.0
BYD3_k127_1478691_23 Isocitrate K00031 GO:0003674,GO:0003824,GO:0004448,GO:0004450,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006091,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0022900,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0055114 1.1.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009471 604.0
BYD3_k127_1478691_24 Belongs to the thiolase family K00626 - 2.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003667 571.0
BYD3_k127_1478691_25 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007624 574.0
BYD3_k127_1478691_26 4-alpha-glucanotransferase K00705,K06044 - 2.4.1.25,5.4.99.15 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 578.0
BYD3_k127_1478691_27 CoA-transferase family III K07749 - 2.8.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001298 537.0
BYD3_k127_1478691_28 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001767 530.0
BYD3_k127_1478691_29 Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily K01756 - 4.3.2.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 526.0
BYD3_k127_1478691_3 Catalyzes the isomerization of citrate to isocitrate via cis-aconitate K01681 - 4.2.1.3 0.0 1223.0
BYD3_k127_1478691_30 Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate K01679 - 4.2.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001334 534.0
BYD3_k127_1478691_31 Belongs to the ABC transporter superfamily K02031,K02032 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 499.0
BYD3_k127_1478691_32 Belongs to the peptidase M17 family K01255 - 3.4.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001804 477.0
BYD3_k127_1478691_33 Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate K00052 GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 473.0
BYD3_k127_1478691_34 aminotransferase K14260 - 2.6.1.2,2.6.1.66 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006701 473.0
BYD3_k127_1478691_35 Class-II DAHP synthetase family K01626 GO:0003674,GO:0003824,GO:0003849,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009507,GO:0009536,GO:0009611,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019438,GO:0019752,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0050896,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.54 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 465.0
BYD3_k127_1478691_36 tRNA methyltransferase complex GCD14 subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002662 464.0
BYD3_k127_1478691_37 Threonine synthase K01733 - 4.2.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001554 451.0
BYD3_k127_1478691_38 Dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008365 439.0
BYD3_k127_1478691_39 Subtilase family K14645 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000281 450.0
BYD3_k127_1478691_4 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 7.646e-278 878.0
BYD3_k127_1478691_40 Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate K00053 - 1.1.1.86 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003908 426.0
BYD3_k127_1478691_41 Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 K00566 - 2.8.1.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005971 428.0
BYD3_k127_1478691_42 component I K01657 - 4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001681 413.0
BYD3_k127_1478691_43 Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family K00826 - 2.6.1.42 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004649 393.0
BYD3_k127_1478691_44 drug transmembrane transporter activity K03327 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 416.0
BYD3_k127_1478691_45 Electron transfer flavoprotein K03522 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005301 388.0
BYD3_k127_1478691_46 gluconolactonase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001067 382.0
BYD3_k127_1478691_47 Evidence 4 Homologs of previously reported genes of - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 385.0
BYD3_k127_1478691_48 alpha/beta hydrolase fold K01561 - 3.8.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007491 368.0
BYD3_k127_1478691_49 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 - 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000196 363.0
BYD3_k127_1478691_5 homoserine dehydrogenase K12524 - 1.1.1.3,2.7.2.4 8.573e-272 859.0
BYD3_k127_1478691_50 PFAM Pyruvate carboxyltransferase K01640,K18314 - 4.1.3.4,4.1.3.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 359.0
BYD3_k127_1478691_51 Subtilase family K17734 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001068 377.0
BYD3_k127_1478691_52 electron transfer flavoprotein beta subunit K03521 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001414 354.0
BYD3_k127_1478691_53 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004636 346.0
BYD3_k127_1478691_54 Preprotein translocase subunit TatD K03424 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002074 337.0
BYD3_k127_1478691_55 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000226 341.0
BYD3_k127_1478691_56 transporter, permease K02033,K15581 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005237 337.0
BYD3_k127_1478691_57 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 337.0
BYD3_k127_1478691_58 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07660 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007479 327.0
BYD3_k127_1478691_59 malonyl CoA-acyl carrier protein transacylase K00645 GO:0003674,GO:0003824,GO:0004312,GO:0004314,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009987,GO:0016053,GO:0016417,GO:0016419,GO:0016420,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0071704,GO:0072330,GO:1901576 2.3.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002536 334.0
BYD3_k127_1478691_6 2,4-dienoyl-coa reductase K00219 - 1.3.1.34 2.464e-256 812.0
BYD3_k127_1478691_60 reductase K00059 - 1.1.1.100 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005936 319.0
BYD3_k127_1478691_61 Histidine kinase K07637 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 323.0
BYD3_k127_1478691_62 sequence-specific DNA binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002869 319.0
BYD3_k127_1478691_63 Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes K02195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 310.0
BYD3_k127_1478691_64 Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation K07082 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000188 315.0
BYD3_k127_1478691_65 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002385 318.0
BYD3_k127_1478691_66 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004619 324.0
BYD3_k127_1478691_67 Bacterial protein of unknown function (DUF899) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004406 307.0
BYD3_k127_1478691_68 PFAM MotA TolQ ExbB proton channel K03561 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000007284 300.0
BYD3_k127_1478691_69 Rossmann fold nucleotide-binding protein K06966 - 3.2.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002609 287.0
BYD3_k127_1478691_7 Belongs to the IlvD Edd family K01687 - 4.2.1.9 2.317e-254 794.0
BYD3_k127_1478691_70 Binding-protein-dependent transport system inner membrane component K02034,K15582 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000003661 295.0
BYD3_k127_1478691_71 Peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000008897 298.0
BYD3_k127_1478691_72 MazG family K02499,K04765 GO:0003674,GO:0003824,GO:0006139,GO:0006163,GO:0006195,GO:0006203,GO:0006213,GO:0006220,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0007154,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009147,GO:0009149,GO:0009151,GO:0009155,GO:0009164,GO:0009166,GO:0009199,GO:0009200,GO:0009203,GO:0009204,GO:0009208,GO:0009210,GO:0009211,GO:0009213,GO:0009215,GO:0009217,GO:0009218,GO:0009219,GO:0009222,GO:0009223,GO:0009259,GO:0009261,GO:0009262,GO:0009264,GO:0009267,GO:0009394,GO:0009605,GO:0009987,GO:0009991,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0019693,GO:0031667,GO:0031668,GO:0031669,GO:0033554,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0034656,GO:0042454,GO:0042594,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044282,GO:0044283,GO:0046046,GO:0046047,GO:0046051,GO:0046052,GO:0046060,GO:0046061,GO:0046070,GO:0046075,GO:0046076,GO:0046080,GO:0046081,GO:0046131,GO:0046133,GO:0046135,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0050896,GO:0051716,GO:0055086,GO:0071496,GO:0071704,GO:0072521,GO:0072523,GO:0072527,GO:0072529,GO:1901135,GO:1901136,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901575,GO:1901576,GO:1901657,GO:1901658 3.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000929 278.0
BYD3_k127_1478691_73 Uracil DNA glycosylase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001346 271.0
BYD3_k127_1478691_74 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001631 286.0
BYD3_k127_1478691_75 oxidoreductase activity, acting on CH-OH group of donors - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003327 280.0
BYD3_k127_1478691_76 Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate K01704 - 4.2.1.33,4.2.1.35 0.00000000000000000000000000000000000000000000000000000000000000000000000000000361 268.0
BYD3_k127_1478691_77 Inner membrane protein involved in colicin E2 resistance K06143 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005953 283.0
BYD3_k127_1478691_78 Trehalose utilisation K09992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008228 267.0
BYD3_k127_1478691_79 membrane transporter protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003684 269.0
BYD3_k127_1478691_8 Penicillin-Binding Protein C-terminus Family - - - 2.452e-251 801.0
BYD3_k127_1478691_80 Catalyzes the ATP-dependent phosphorylation of L- homoserine to L-homoserine phosphate K00872 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004413,GO:0006082,GO:0006520,GO:0006555,GO:0006566,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009088,GO:0009092,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000109 276.0
BYD3_k127_1478691_81 Inositol monophosphatase family K01082 - 3.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000007757 262.0
BYD3_k127_1478691_82 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003837 257.0
BYD3_k127_1478691_83 low molecular weight K03741,K03892 - 1.20.4.1 0.00000000000000000000000000000000000000000000000000000000000000000000000009947 251.0
BYD3_k127_1478691_84 Peroxiredoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000001689 247.0
BYD3_k127_1478691_85 PD-(D/E)XK nuclease superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005651 273.0
BYD3_k127_1478691_86 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003265 259.0
BYD3_k127_1478691_87 Belongs to the pseudouridine synthase RsuA family K06181 - 5.4.99.20 0.0000000000000000000000000000000000000000000000000000000000000000000000626 261.0
BYD3_k127_1478691_88 MaoC like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000008965 240.0
BYD3_k127_1478691_89 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000009716 257.0
BYD3_k127_1478691_9 3-hydroxyacyl-CoA dehydrogenase NAD-binding K07516 - 1.1.1.35 8.757e-250 790.0
BYD3_k127_1478691_90 Major facilitator K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000001099 252.0
BYD3_k127_1478691_91 XdhC and CoxI family - - - 0.000000000000000000000000000000000000000000000000000000000000000003043 240.0
BYD3_k127_1478691_92 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000002754 243.0
BYD3_k127_1478691_93 Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis K00943 GO:0003674,GO:0003824,GO:0004798,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006220,GO:0006221,GO:0006227,GO:0006233,GO:0006235,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009041,GO:0009058,GO:0009117,GO:0009123,GO:0009132,GO:0009133,GO:0009138,GO:0009139,GO:0009141,GO:0009142,GO:0009147,GO:0009148,GO:0009165,GO:0009186,GO:0009189,GO:0009196,GO:0009197,GO:0009200,GO:0009202,GO:0009211,GO:0009212,GO:0009219,GO:0009221,GO:0009262,GO:0009263,GO:0009265,GO:0009394,GO:0009987,GO:0015949,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019692,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046072,GO:0046075,GO:0046077,GO:0046385,GO:0046483,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.4.9 0.0000000000000000000000000000000000000000000000000000000000001324 218.0
BYD3_k127_1478691_94 Activator of Hsp90 ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000001772 216.0
BYD3_k127_1478691_95 Belongs to the MIP aquaporin (TC 1.A.8) family - - - 0.00000000000000000000000000000000000000000000000000000000001151 213.0
BYD3_k127_1478691_96 Belongs to the LOG family K06966 - 3.2.2.10 0.0000000000000000000000000000000000000000000000000000000008699 216.0
BYD3_k127_1478691_97 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000000000000000000000000000000000000000000002137 215.0
BYD3_k127_1478691_98 ROK family K00845,K00886 - 2.7.1.2,2.7.1.63 0.00000000000000000000000000000000000000000000000000000006378 211.0
BYD3_k127_1478691_99 translation initiation factor activity K06996 - - 0.0000000000000000000000000000000000000000000000000000001304 210.0
BYD3_k127_1482295_0 Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 542.0
BYD3_k127_1482295_1 Prephenate dehydratase K14170 - 4.2.1.51,5.4.99.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001622 435.0
BYD3_k127_1482295_2 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 GO:0003674,GO:0003824,GO:0004648,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006081,GO:0006082,GO:0006520,GO:0006553,GO:0006563,GO:0006564,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009070,GO:0009085,GO:0009089,GO:0009108,GO:0009110,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019752,GO:0019842,GO:0030170,GO:0033359,GO:0034641,GO:0036094,GO:0042364,GO:0042816,GO:0042819,GO:0042822,GO:0042823,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046184,GO:0046394,GO:0046451,GO:0046483,GO:0048037,GO:0050662,GO:0051186,GO:0051188,GO:0070279,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1901615,GO:1901617 2.6.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002328 385.0
BYD3_k127_1482295_3 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001551 396.0
BYD3_k127_1482295_4 Belongs to the cytidylate kinase family. Type 1 subfamily K00945 - 2.7.4.25 0.000000000000000000000000000000000000000000000000000000000000000000000001713 257.0
BYD3_k127_1482295_5 thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence K02945 - - 0.000000000000000000000000000000000044 136.0
BYD3_k127_1485022_0 COG1629 Outer membrane receptor proteins, mostly Fe transport K02014 - - 4.905e-253 814.0
BYD3_k127_1485022_1 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003952 619.0
BYD3_k127_1485022_10 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07711 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 345.0
BYD3_k127_1485022_11 DNA photolyase K01669 GO:0000003,GO:0000166,GO:0000719,GO:0001101,GO:0002252,GO:0002376,GO:0003006,GO:0003674,GO:0003824,GO:0003904,GO:0003913,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0006139,GO:0006259,GO:0006281,GO:0006290,GO:0006325,GO:0006338,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006873,GO:0006874,GO:0006875,GO:0006950,GO:0006952,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009314,GO:0009414,GO:0009415,GO:0009416,GO:0009605,GO:0009606,GO:0009607,GO:0009615,GO:0009628,GO:0009637,GO:0009638,GO:0009642,GO:0009645,GO:0009646,GO:0009648,GO:0009719,GO:0009725,GO:0009785,GO:0009791,GO:0009881,GO:0009882,GO:0009888,GO:0009893,GO:0009909,GO:0009911,GO:0009987,GO:0010033,GO:0010035,GO:0010073,GO:0010075,GO:0010118,GO:0010228,GO:0010244,GO:0010617,GO:0014070,GO:0016043,GO:0016604,GO:0016829,GO:0016830,GO:0017076,GO:0019222,GO:0019637,GO:0019725,GO:0022414,GO:0022603,GO:0023052,GO:0030003,GO:0030522,GO:0030554,GO:0031323,GO:0031325,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0033993,GO:0034641,GO:0035639,GO:0036094,GO:0038023,GO:0040008,GO:0042221,GO:0042592,GO:0042726,GO:0042752,GO:0042802,GO:0043167,GO:0043168,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044260,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046483,GO:0048037,GO:0048507,GO:0048509,GO:0048511,GO:0048518,GO:0048522,GO:0048571,GO:0048573,GO:0048574,GO:0048580,GO:0048582,GO:0048583,GO:0048608,GO:0048638,GO:0048731,GO:0048831,GO:0048856,GO:0048878,GO:0050660,GO:0050662,GO:0050789,GO:0050793,GO:0050794,GO:0050801,GO:0050896,GO:0051094,GO:0051186,GO:0051239,GO:0051240,GO:0051276,GO:0051480,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0055065,GO:0055074,GO:0055080,GO:0055082,GO:0055086,GO:0060089,GO:0061458,GO:0065007,GO:0065008,GO:0070013,GO:0071214,GO:0071478,GO:0071482,GO:0071483,GO:0071704,GO:0071840,GO:0071949,GO:0072387,GO:0072503,GO:0072507,GO:0090304,GO:0097159,GO:0097367,GO:0098542,GO:0098771,GO:0104004,GO:0140097,GO:1900618,GO:1901265,GO:1901360,GO:1901363,GO:1901371,GO:1901564,GO:1901700,GO:1902347,GO:1905421,GO:2000024,GO:2000026,GO:2000028,GO:2000241,GO:2000243,GO:2000377,GO:2000379 4.1.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008935 338.0
BYD3_k127_1485022_12 serine protease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002788 331.0
BYD3_k127_1485022_13 Diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000117 273.0
BYD3_k127_1485022_14 COG0811 Biopolymer transport proteins - - - 0.000000000000000000000000000000000000000000000000000000000000001826 228.0
BYD3_k127_1485022_15 Transposase IS200 like K07491 - - 0.000000000000000000000000000000000000000000000000000001365 198.0
BYD3_k127_1485022_16 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000001114 181.0
BYD3_k127_1485022_17 Copper chaperone PCu(A)C K09796 - - 0.0000000000000000000000000009002 132.0
BYD3_k127_1485022_18 Amb_all K01728 - 4.2.2.2 0.000000000000000006206 100.0
BYD3_k127_1485022_19 Amb_all K01728 - 4.2.2.2 0.00000000000005408 87.0
BYD3_k127_1485022_2 Sugar (and other) transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007392 548.0
BYD3_k127_1485022_20 Bacterial protein of unknown function (Gcw_chp) - - - 0.000000000002895 78.0
BYD3_k127_1485022_21 - - - - 0.00000000007916 73.0
BYD3_k127_1485022_22 Calcineurin-like phosphoesterase - - - 0.00000001255 68.0
BYD3_k127_1485022_3 acetoacetate metabolism regulatory protein AtoC K07714 K07715 GO:0000156,GO:0000160,GO:0000976,GO:0000984,GO:0001017,GO:0001067,GO:0001130,GO:0001150,GO:0001151,GO:0001158,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0023052,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0035326,GO:0035556,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0051716,GO:0060089,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001252 503.0
BYD3_k127_1485022_4 Male sterility protein K01784 - 5.1.3.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002154 464.0
BYD3_k127_1485022_5 ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity K06048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001265 442.0
BYD3_k127_1485022_6 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005866 460.0
BYD3_k127_1485022_7 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004013 420.0
BYD3_k127_1485022_8 ATPase activity K02045 - 3.6.3.25 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003074 404.0
BYD3_k127_1485022_9 A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000335 353.0
BYD3_k127_148587_0 Required for chromosome condensation and partitioning K03529 - - 0.0 1055.0
BYD3_k127_148587_1 Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction K00962 - 2.7.7.8 9.386e-314 974.0
BYD3_k127_148587_10 Belongs to the SUA5 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000518 296.0
BYD3_k127_148587_11 Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5- dihydroxy-2-cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon K01894 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007161 283.0
BYD3_k127_148587_12 Carboxylesterase K06999 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002895 270.0
BYD3_k127_148587_13 Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs K03177 - 5.4.99.25 0.000000000000000000000000000000000000000000000000000000000000000000000000003456 262.0
BYD3_k127_148587_14 Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) K09457 - 1.7.1.13 0.0000000000000000000000000000000000000000000000000000000001733 205.0
BYD3_k127_148587_15 positive regulation of macromolecule biosynthetic process K03973 - - 0.0000000000000000000000000000000000000000000000000000119 203.0
BYD3_k127_148587_16 Belongs to the ompA family K03286 - - 0.0000000000000000000000000000000000000000000000003365 191.0
BYD3_k127_148587_17 Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression K06204 - - 0.00000000000000000000000000000000000000000000000203 184.0
BYD3_k127_148587_18 PPIC-type PPIASE domain K03769 - 5.2.1.8 0.0000000000000000000000000000000000000000001598 171.0
BYD3_k127_148587_19 TIGRFAM Polyhydroxyalkanoate synthesis repressor PhaR - - - 0.000000000000000000000000000000000000000002049 161.0
BYD3_k127_148587_2 One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex K02519 - - 8.563e-290 913.0
BYD3_k127_148587_20 negative regulation of transcription, DNA-templated K10947 - - 0.0000000000000000000000000000000000000001099 153.0
BYD3_k127_148587_21 DNA-templated transcription, initiation K02405 - - 0.0000000000000000000000000000000000007625 147.0
BYD3_k127_148587_22 Required for maturation of 30S ribosomal subunits K09748 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000004507 134.0
BYD3_k127_148587_23 Transcription factor zinc-finger - - - 0.000000000000000000000000000000006928 135.0
BYD3_k127_148587_24 Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome K02956 - - 0.000000000000000000000000000004853 121.0
BYD3_k127_148587_25 probably involved in intracellular septation K06190 - - 0.00000000000000000000000004285 123.0
BYD3_k127_148587_26 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA K02834 - - 0.000000000000000000000002444 106.0
BYD3_k127_148587_27 Belongs to the BolA IbaG family K05527 - - 0.00000000000000000000003937 103.0
BYD3_k127_148587_28 Histidine kinase - - - 0.0000000000000000000002925 103.0
BYD3_k127_148587_29 Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins K03528 - - 0.000000001087 69.0
BYD3_k127_148587_3 FAD-dependent dehydrogenases K07137 - - 2.346e-280 869.0
BYD3_k127_148587_4 DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA K01972 - 6.5.1.2 7.369e-226 720.0
BYD3_k127_148587_5 Participates in both transcription termination and antitermination K02600 - - 3.147e-215 679.0
BYD3_k127_148587_6 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002326 584.0
BYD3_k127_148587_7 Protein tyrosine kinase K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004483 417.0
BYD3_k127_148587_8 Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family K03437 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002106 343.0
BYD3_k127_148587_9 Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit K02427 GO:0000027,GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008650,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016436,GO:0016740,GO:0016741,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042273,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.166 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 298.0
BYD3_k127_1548238_0 SMART Peptidoglycan-binding Lysin subgroup K16291 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001262 348.0
BYD3_k127_1548238_1 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003506 264.0
BYD3_k127_1548238_2 TPM domain K06872 - - 0.00000000000000000000000000000000000000000000000000000000000000000001189 243.0
BYD3_k127_1548238_3 TPM domain - - - 0.0000000000000000000000000000000000000000000000001756 181.0
BYD3_k127_1674356_0 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 0.0 1117.0
BYD3_k127_1674356_1 Glycosyl hydrolases family 28 - - - 1.667e-223 704.0
BYD3_k127_1674356_10 peroxiredoxin activity K03564 GO:0003674,GO:0003824,GO:0004601,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006950,GO:0006979,GO:0008150,GO:0008152,GO:0008379,GO:0009636,GO:0009987,GO:0016209,GO:0016491,GO:0016684,GO:0019725,GO:0033554,GO:0034599,GO:0042221,GO:0042592,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0045454,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0051920,GO:0055114,GO:0065007,GO:0065008,GO:0070887,GO:0097237,GO:0098754,GO:0098869,GO:1990748 1.11.1.15 0.000000000000000000000000000000001842 137.0
BYD3_k127_1674356_11 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.000000000000000000000000000000003213 132.0
BYD3_k127_1674356_12 PFAM MerR family regulatory protein - - - 0.00000000000000000000000000000004854 135.0
BYD3_k127_1674356_13 Histidine phosphatase superfamily (branch 1) - - - 0.00000000000000000000001041 109.0
BYD3_k127_1674356_14 Domain of unknown function (DUF4154) - - - 0.0000000000000000004922 94.0
BYD3_k127_1674356_15 - - - - 0.00000001459 62.0
BYD3_k127_1674356_16 EF-hand domain pair - - - 0.0000004895 55.0
BYD3_k127_1674356_2 PFAM Haloacid dehalogenase-like hydrolase - - - 2.379e-197 631.0
BYD3_k127_1674356_3 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002025 587.0
BYD3_k127_1674356_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 522.0
BYD3_k127_1674356_5 Alcohol dehydrogenase GroES-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006333 440.0
BYD3_k127_1674356_6 metal-dependent hydrolase with the TIM-barrel fold K07048 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000626 410.0
BYD3_k127_1674356_7 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001002 358.0
BYD3_k127_1674356_8 Belongs to the glycosyl hydrolase 43 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 308.0
BYD3_k127_1674356_9 Uncharacterised protein family UPF0047 - - - 0.00000000000000000000000000000000000000000000000000001768 193.0
BYD3_k127_1685131_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03043 - 2.7.7.6 0.0 2100.0
BYD3_k127_1685131_1 AcrB/AcrD/AcrF family - - - 0.0 1432.0
BYD3_k127_1685131_10 beta-N-acetylhexosaminidase K12373 - 3.2.1.52 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009422 548.0
BYD3_k127_1685131_11 Tfp pilus assembly protein tip-associated adhesin K02674 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004713 508.0
BYD3_k127_1685131_12 Belongs to the cysteine synthase cystathionine beta- synthase family K01738 - 2.5.1.47 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005759 470.0
BYD3_k127_1685131_13 Transfers a succinyl group from succinyl-CoA to L- serine, forming succinyl-L-serine K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005203 436.0
BYD3_k127_1685131_14 Peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002376 444.0
BYD3_k127_1685131_15 Belongs to the metallo-dependent hydrolases superfamily. NagA family K01443 - 3.5.1.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 440.0
BYD3_k127_1685131_16 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009775 424.0
BYD3_k127_1685131_17 Sigma factor regulator FecR K00820 - 2.6.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001167 402.0
BYD3_k127_1685131_18 Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005551 400.0
BYD3_k127_1685131_19 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008068 381.0
BYD3_k127_1685131_2 - - - - 0.0 1062.0
BYD3_k127_1685131_20 Belongs to the peptidase S51 family K05995 - 3.4.13.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007856 347.0
BYD3_k127_1685131_21 Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release K02863 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005386 322.0
BYD3_k127_1685131_22 Participates in transcription elongation, termination and antitermination K02601 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002522 293.0
BYD3_k127_1685131_23 Oxidoreductase molybdopterin binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 304.0
BYD3_k127_1685131_24 PFAM oxidoreductase FAD NAD(P)-binding domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001218 284.0
BYD3_k127_1685131_25 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001424 283.0
BYD3_k127_1685131_26 LemA family K03744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002784 280.0
BYD3_k127_1685131_27 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000002246 246.0
BYD3_k127_1685131_28 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors K02867 - - 0.00000000000000000000000000000000000000000000000000000000000000000002643 233.0
BYD3_k127_1685131_29 UTRA domain - - - 0.00000000000000000000000000000000000000000000000000000000000002979 223.0
BYD3_k127_1685131_3 TonB dependent receptor K02014 - - 7.829e-294 931.0
BYD3_k127_1685131_30 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000149 218.0
BYD3_k127_1685131_31 Electron transfer DM13 - - - 0.000000000000000000000000000000000000000000000000000000000001542 213.0
BYD3_k127_1685131_32 Glyoxalase-like domain - - - 0.0000000000000000000000000000000000000000000000000001562 191.0
BYD3_k127_1685131_33 TraB family - - - 0.0000000000000000000000000000000000000000000000000002248 199.0
BYD3_k127_1685131_34 Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors K02864 - - 0.00000000000000000000000000000000000000000000000002644 188.0
BYD3_k127_1685131_35 Endonuclease/Exonuclease/phosphatase family - - - 0.0000000000000000000000000000000000000000000001595 180.0
BYD3_k127_1685131_36 - - - - 0.000000000000000000000000000000000000000000001351 166.0
BYD3_k127_1685131_37 zinc-transporting ATPase activity K01990 - - 0.00000000000000000000000000000000000002552 155.0
BYD3_k127_1685131_38 Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation K02935 - - 0.00000000000000000000000000000000002246 138.0
BYD3_k127_1685131_39 HEAT repeats - - - 0.000000000000000000000000000001003 133.0
BYD3_k127_1685131_4 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 2.433e-223 696.0
BYD3_k127_1685131_41 PBS lyase HEAT-like repeat - - - 0.0000000000000000000000002351 118.0
BYD3_k127_1685131_42 Prokaryotic N-terminal methylation motif K02655 - - 0.0000000000000000000005185 109.0
BYD3_k127_1685131_43 - - - - 0.00000000000000000002326 104.0
BYD3_k127_1685131_44 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.0000000000000000000471 95.0
BYD3_k127_1685131_45 - - - - 0.00000000000000000004804 96.0
BYD3_k127_1685131_46 PFAM sigma-70 region 2 domain protein K03088 GO:0001101,GO:0005575,GO:0005623,GO:0005886,GO:0006355,GO:0008150,GO:0009410,GO:0009415,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0010035,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0016020,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042221,GO:0044464,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071944,GO:0080090,GO:1901700,GO:1902680,GO:1903506,GO:1903508,GO:2000112,GO:2001141 - 0.000000000000000002153 93.0
BYD3_k127_1685131_5 PTS system, glucose subfamily, IIA K11189 - - 8.71e-221 710.0
BYD3_k127_1685131_50 Type II transport protein GspH K08084 - - 0.0000000000001097 80.0
BYD3_k127_1685131_51 type IV pilus modification protein PilV K02671 - - 0.0000000000002273 76.0
BYD3_k127_1685131_52 Type IV Pilus-assembly protein W K02672 - - 0.00000000000032 81.0
BYD3_k127_1685131_53 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000001855 79.0
BYD3_k127_1685131_54 - - - - 0.000000000004215 73.0
BYD3_k127_1685131_56 PilZ domain - - - 0.000000002043 62.0
BYD3_k127_1685131_57 Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation K03073 - - 0.00000009445 53.0
BYD3_k127_1685131_6 Protein of unknown function (DUF1593) - - - 3.056e-199 632.0
BYD3_k127_1685131_7 PTS system, N-acetylglucosamine-specific K02803,K02804 - 2.7.1.193 1.248e-196 642.0
BYD3_k127_1685131_8 Epoxide hydrolase N terminus - - - 4.912e-194 614.0
BYD3_k127_1685131_9 Tryptophan halogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001785 612.0
BYD3_k127_1766604_0 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 1.141e-283 892.0
BYD3_k127_1766604_1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source K00820 GO:0003674,GO:0003824,GO:0004360,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006002,GO:0006040,GO:0006047,GO:0006139,GO:0006464,GO:0006486,GO:0006487,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009225,GO:0009987,GO:0016740,GO:0016769,GO:0019538,GO:0019637,GO:0034641,GO:0034645,GO:0036211,GO:0043170,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0055086,GO:0070085,GO:0070548,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.6.1.16 6.899e-263 823.0
BYD3_k127_1766604_10 Aldo/keto reductase family K19265 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001256 480.0
BYD3_k127_1766604_11 Peptidoglycan-binding domain 1 protein K02450 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0016020,GO:0044424,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008156 456.0
BYD3_k127_1766604_12 PFAM Peptidase S13, D-Ala-D-Ala carboxypeptidase C K07259 - 3.4.16.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000237 393.0
BYD3_k127_1766604_13 Gluconolactonase K01053 - 3.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001456 369.0
BYD3_k127_1766604_14 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005886,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033178,GO:0034220,GO:0034641,GO:0034654,GO:0036442,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044459,GO:0044464,GO:0044769,GO:0045259,GO:0045260,GO:0045261,GO:0045262,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0046961,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0071944,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0098797,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004542 340.0
BYD3_k127_1766604_15 Major Facilitator Superfamily K03301 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001931 331.0
BYD3_k127_1766604_16 Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII K02346 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001423 310.0
BYD3_k127_1766604_17 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001212 317.0
BYD3_k127_1766604_18 glycosyl transferase group 1 K14335 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003289 305.0
BYD3_k127_1766604_19 PFAM beta-lactamase domain protein K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006256 278.0
BYD3_k127_1766604_2 Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 K14441 - 2.8.4.4 5.421e-203 639.0
BYD3_k127_1766604_20 Glutathione S-Transferase K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000007804 251.0
BYD3_k127_1766604_21 DinB superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000852 237.0
BYD3_k127_1766604_22 2OG-Fe(II) oxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000002383 220.0
BYD3_k127_1766604_23 anaphase-promoting complex binding - - - 0.0000000000000000000000000000000000000000000000000000000000001586 224.0
BYD3_k127_1766604_24 Protein kinase domain K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000007595 230.0
BYD3_k127_1766604_25 glycosyl hydrolase, BNR repeat-containing protein - - - 0.00000000000000000000000000000000000000000000000000000004859 226.0
BYD3_k127_1766604_26 Protein of unknown function, DUF488 - - - 0.000000000000000000000000000000000000000000000000000007973 192.0
BYD3_k127_1766604_27 metal cluster binding K06940 - - 0.0000000000000000000000000000000000000000000000002096 196.0
BYD3_k127_1766604_28 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000002096 190.0
BYD3_k127_1766604_29 Acetyltransferase (GNAT) domain K00657 - 2.3.1.57 0.0000000000000000000000000000000000000000000000005908 182.0
BYD3_k127_1766604_3 converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA K06445 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008212 598.0
BYD3_k127_1766604_30 Domain of unknown function (DUF4399) - - - 0.0000000000000000000000000000000000000000000607 164.0
BYD3_k127_1766604_31 transcriptional regulator K13652 - - 0.00000000000000000000000000000000000000000008115 173.0
BYD3_k127_1766604_32 Protein of unknown function (DUF1697) - - - 0.0000000000000000000000000000000000000000005835 164.0
BYD3_k127_1766604_33 Produces ATP from ADP in the presence of a proton gradient across the membrane K02114 - - 0.000000000000000000000000000000000000000002276 159.0
BYD3_k127_1766604_34 Protein of unknown function (DUF3667) - - - 0.0000000000000000000000000000000000000002851 162.0
BYD3_k127_1766604_35 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 0.00000000000000000000000000000000000000183 148.0
BYD3_k127_1766604_36 Hpt domain - - - 0.00000000000000000000000000000000000205 159.0
BYD3_k127_1766604_37 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.00000000000000000000000000000000003812 145.0
BYD3_k127_1766604_38 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester - - - 0.0000000000000000000000000000000001659 145.0
BYD3_k127_1766604_39 Putative inner membrane exporter, YdcZ K09936 - - 0.00000000000000000000000000003846 121.0
BYD3_k127_1766604_4 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000127 586.0
BYD3_k127_1766604_40 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000394 124.0
BYD3_k127_1766604_41 GDP-mannose mannosyl hydrolase activity K03574 - 3.6.1.55 0.0000000000000000000001259 102.0
BYD3_k127_1766604_42 Type II secretion system protein B K02451 - - 0.00000000000000004234 92.0
BYD3_k127_1766604_43 KTSC domain - - - 0.0000000000000001907 83.0
BYD3_k127_1766604_44 - - - - 0.0000000000000004429 87.0
BYD3_k127_1766604_45 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000009567 82.0
BYD3_k127_1766604_46 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0000000002601 70.0
BYD3_k127_1766604_47 Beta-Casp domain K07576 - - 0.0000000002618 64.0
BYD3_k127_1766604_49 Protein of unknown function (DUF3592) - - - 0.0000009142 56.0
BYD3_k127_1766604_5 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL K07303 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002926 570.0
BYD3_k127_1766604_50 Protein of unknown function (DUF2845) - - - 0.00003012 50.0
BYD3_k127_1766604_52 - - - - 0.0005 48.0
BYD3_k127_1766604_6 Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain K04042 - 2.3.1.157,2.7.7.23 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001099 539.0
BYD3_k127_1766604_7 COG2610 H gluconate symporter and related permeases K03299,K06155,K06157,K16321 GO:0003674,GO:0005215,GO:0005342,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008028,GO:0008150,GO:0008509,GO:0008514,GO:0008643,GO:0015075,GO:0015128,GO:0015144,GO:0015318,GO:0015568,GO:0015711,GO:0015718,GO:0015726,GO:0015849,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034219,GO:0034220,GO:0035429,GO:0042873,GO:0042879,GO:0044425,GO:0044459,GO:0044464,GO:0046942,GO:0046943,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071944,GO:0098656,GO:1903825,GO:1905039 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 514.0
BYD3_k127_1766604_8 COG1473 Metal-dependent amidase aminoacylase carboxypeptidase K01436 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000637 512.0
BYD3_k127_1766604_9 CobW/HypB/UreG, nucleotide-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003503 497.0
BYD3_k127_1864189_0 Domain of Unknown Function with PDB structure (DUF3857) - - - 1.534e-236 782.0
BYD3_k127_1864189_1 PFAM sodium alanine symporter K03310 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005137 476.0
BYD3_k127_1864189_2 Predicted membrane protein (DUF2238) K08984 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 288.0
BYD3_k127_1864189_3 Transglutaminase/protease-like homologues - - - 0.0000000000000000000000000000000000000000005866 175.0
BYD3_k127_1864189_4 PFAM MazG nucleotide pyrophosphohydrolase - - - 0.0000000000000000000000000000000000000003903 152.0
BYD3_k127_1864189_5 - - - - 0.0000000000003332 82.0
BYD3_k127_1865319_0 WD40 repeat, subgroup - - - 0.0 2030.0
BYD3_k127_1865319_1 response regulator receiver K02481 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002306 505.0
BYD3_k127_1865319_10 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000001997 211.0
BYD3_k127_1865319_11 -O-antigen K18814 - - 0.000000000000000000000000000000000000000000000000005382 199.0
BYD3_k127_1865319_12 Fkbm family - - - 0.00000000000000000000000000000000000000000000002647 178.0
BYD3_k127_1865319_13 Hexapeptide repeat of succinyl-transferase K13018 - 2.3.1.201 0.00000000000000000000000000000000000000001324 156.0
BYD3_k127_1865319_14 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000002292 145.0
BYD3_k127_1865319_15 COGs COG5305 membrane protein - - - 0.0000000001672 75.0
BYD3_k127_1865319_16 Acetyltransferase (GNAT) domain - - - 0.0000000002626 72.0
BYD3_k127_1865319_2 Glycosyltransferase like family 2 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004296 454.0
BYD3_k127_1865319_3 COG0463 Glycosyltransferases involved in cell wall biogenesis K00721 - 2.4.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002981 419.0
BYD3_k127_1865319_4 Bacterial sugar transferase K21303 - 2.7.8.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002804 385.0
BYD3_k127_1865319_5 polysaccharide deacetylase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007569 344.0
BYD3_k127_1865319_6 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006409 300.0
BYD3_k127_1865319_7 Formyl transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007989 276.0
BYD3_k127_1865319_8 Glycosyltransferase Family 4 - - - 0.00000000000000000000000000000000000000000000000000000000000000001168 239.0
BYD3_k127_1865319_9 Involved in the tonB-independent uptake of proteins - - - 0.000000000000000000000000000000000000000000000000000000000000002257 231.0
BYD3_k127_1866771_0 Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force K15987 - 3.6.1.1 4.025e-317 983.0
BYD3_k127_1866771_1 Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate K00615 - 2.2.1.1 1.957e-282 883.0
BYD3_k127_1866771_10 Acts as a magnesium transporter K06213 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006616 465.0
BYD3_k127_1866771_11 AAA domain (Cdc48 subfamily) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005316 454.0
BYD3_k127_1866771_12 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released K03092 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007905 437.0
BYD3_k127_1866771_13 Arabinose 5-phosphate isomerase K06041 - 5.3.1.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003099 411.0
BYD3_k127_1866771_14 ABC transporter K06861 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000661 329.0
BYD3_k127_1866771_15 esterase of the alpha-beta hydrolase superfamily K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 313.0
BYD3_k127_1866771_16 Displays ATPase and GTPase activities K06958 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0034641,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009208 307.0
BYD3_k127_1866771_17 Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides K03684 - 3.1.13.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000003847 279.0
BYD3_k127_1866771_18 Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes K03651 GO:0003674,GO:0003824,GO:0004112,GO:0004114,GO:0004115,GO:0005488,GO:0005506,GO:0008081,GO:0008150,GO:0008198,GO:0009987,GO:0016043,GO:0016787,GO:0016788,GO:0042545,GO:0042578,GO:0043167,GO:0043169,GO:0045229,GO:0046872,GO:0046914,GO:0071554,GO:0071555,GO:0071840 3.1.4.53 0.00000000000000000000000000000000000000000000000000000000000000000004682 241.0
BYD3_k127_1866771_19 Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism K00939 - 2.7.4.3 0.0000000000000000000000000000000000000000000000000000000000005507 221.0
BYD3_k127_1866771_2 Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine K00790 - 2.5.1.7 6.645e-200 629.0
BYD3_k127_1866771_20 Glycine zipper - - - 0.000000000000000000000000000000000000000000000000000000005941 205.0
BYD3_k127_1866771_21 peptidase S16, lon K07157 - - 0.000000000000000000000000000000000000000000000000000333 190.0
BYD3_k127_1866771_22 Redoxin K03564 - 1.11.1.15 0.000000000000000000000000000000000000000000000000001453 190.0
BYD3_k127_1866771_23 TraB family K09973 - - 0.000000000000000000000000000000000000000001662 170.0
BYD3_k127_1866771_24 Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate K03270 GO:0000271,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0006629,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008781,GO:0009058,GO:0009059,GO:0009103,GO:0009987,GO:0016051,GO:0016311,GO:0016740,GO:0016772,GO:0016779,GO:0016787,GO:0016788,GO:0016791,GO:0019143,GO:0033692,GO:0034637,GO:0034645,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044424,GO:0044444,GO:0044464,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 3.1.3.45 0.000000000000000000000000000000000000000005336 165.0
BYD3_k127_1866771_25 NIPSNAP family containing protein - - - 0.000000000000000000000000000000000000006851 154.0
BYD3_k127_1866771_26 Belongs to the P-Pant transferase superfamily K06133 - - 0.000000000000000000000000000000000000009492 154.0
BYD3_k127_1866771_27 Sigma 54 modulation protein K05808 - - 0.000000000000000000000000000000000003223 139.0
BYD3_k127_1866771_28 PFAM CAAX amino terminal protease family K07052 - - 0.00000000000000000000000000000111 134.0
BYD3_k127_1866771_29 - - - - 0.00000000000000000000000002855 115.0
BYD3_k127_1866771_3 Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions K21071 - 2.7.1.11,2.7.1.90 9.682e-195 616.0
BYD3_k127_1866771_30 - - - - 0.00000000000000000001675 99.0
BYD3_k127_1866771_31 Belongs to the BolA IbaG family - - - 0.0000000000000000002025 90.0
BYD3_k127_1866771_32 COG0500 SAM-dependent methyltransferases - - - 0.000000000000007198 83.0
BYD3_k127_1866771_33 Lipopolysaccharide-assembly, LptC-related K11719 - - 0.000000005926 66.0
BYD3_k127_1866771_34 - - - - 0.0000001086 63.0
BYD3_k127_1866771_35 Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm K09774 - - 0.0009782 49.0
BYD3_k127_1866771_4 Reutilizes the intact tripeptide L-alanyl-gamma-D- glutamyl-meso-diaminopimelate by linking it to UDP-N- acetylmuramate K02558 - 6.3.2.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007841 580.0
BYD3_k127_1866771_5 PFAM Peptidase S45, penicillin amidase K01434 - 3.5.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 562.0
BYD3_k127_1866771_6 protein conserved in bacteria K09989 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007211 533.0
BYD3_k127_1866771_7 Belongs to the glyceraldehyde-3-phosphate dehydrogenase family K00134 - 1.2.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 529.0
BYD3_k127_1866771_8 Belongs to the phosphoglycerate kinase family K00927 - 2.7.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007705 528.0
BYD3_k127_1866771_9 Belongs to the pyruvate kinase family K00873 - 2.7.1.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004005 530.0
BYD3_k127_1873130_0 Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second K01958 - 6.4.1.1 0.0 1552.0
BYD3_k127_1873130_1 homoserine kinase activity K02204 - 2.7.1.39 0.0 1289.0
BYD3_k127_1873130_10 GMC oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000003995 224.0
BYD3_k127_1873130_11 - - - - 0.00000000000000000000000000000000000000000000000000000000513 211.0
BYD3_k127_1873130_12 diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000002095 213.0
BYD3_k127_1873130_13 gluconolactonase activity K01053 - 3.1.1.17 0.000000000000000000000000000000262 124.0
BYD3_k127_1873130_14 - - - - 0.000000000000000000000000007214 128.0
BYD3_k127_1873130_15 negative regulation of translational initiation - - - 0.000000000000000000003644 102.0
BYD3_k127_1873130_16 WD40-like Beta Propeller - - - 0.00000000000000000001759 106.0
BYD3_k127_1873130_17 Protein of unknown function (DUF2845) - - - 0.0000000000005215 74.0
BYD3_k127_1873130_2 Glycosyl hydrolases family 43 - - - 5.99e-311 969.0
BYD3_k127_1873130_3 Glycogen debranching enzyme - - - 9.594e-205 657.0
BYD3_k127_1873130_4 Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily K01919 - 6.3.2.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006711 552.0
BYD3_k127_1873130_5 oxidoreductase activity, acting on CH-OH group of donors - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001679 419.0
BYD3_k127_1873130_6 Pyridine nucleotide-disulphide oxidoreductase K03885 - 1.6.99.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005101 406.0
BYD3_k127_1873130_7 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007613 379.0
BYD3_k127_1873130_8 Asparaginase K13051 - 3.4.19.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001892 361.0
BYD3_k127_1873130_9 Major intrinsic protein K06188 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004155 260.0
BYD3_k127_1883188_0 Sarcosine oxidase, gamma subunit family K00302 - 1.5.3.1 3.518e-294 930.0
BYD3_k127_1883188_1 Belongs to the glutamate synthase family K22083 - 2.1.1.21 4.75e-246 767.0
BYD3_k127_1883188_10 PFAM glycosyl transferase group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008416 463.0
BYD3_k127_1883188_11 PFAM Protein kinase domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011 483.0
BYD3_k127_1883188_12 COG0457 FOG TPR repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004774 429.0
BYD3_k127_1883188_13 PFAM FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005413 410.0
BYD3_k127_1883188_14 Glutamine amidotransferase domain K22081 - 2.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001714 403.0
BYD3_k127_1883188_15 Lanthionine synthetase C-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 397.0
BYD3_k127_1883188_16 PFAM sugar transferase K03606 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001934 379.0
BYD3_k127_1883188_17 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003575 360.0
BYD3_k127_1883188_18 Amidohydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005612 362.0
BYD3_k127_1883188_19 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001862 343.0
BYD3_k127_1883188_2 multicopper - - - 1.198e-234 739.0
BYD3_k127_1883188_20 RsbT co-antagonist protein rsbRD N-terminal domain K17763 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004325 326.0
BYD3_k127_1883188_21 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007779 313.0
BYD3_k127_1883188_22 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008396 319.0
BYD3_k127_1883188_23 Bacteriocin-protection, YdeI or OmpD-Associated - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002841 298.0
BYD3_k127_1883188_24 GXGXG motif K22082 - 2.1.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007916 310.0
BYD3_k127_1883188_25 LytTr DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001519 292.0
BYD3_k127_1883188_26 Putative cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000007122 271.0
BYD3_k127_1883188_27 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000007658 267.0
BYD3_k127_1883188_28 Glutathione S-transferase K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000001044 251.0
BYD3_k127_1883188_29 transferase activity, transferring glycosyl groups - - - 0.000000000000000000000000000000000000000000000000000000000000000000002762 250.0
BYD3_k127_1883188_3 TonB dependent receptor - - - 4.723e-213 691.0
BYD3_k127_1883188_30 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000483 240.0
BYD3_k127_1883188_31 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000007163 261.0
BYD3_k127_1883188_32 Copper resistance K07233 - - 0.0000000000000000000000000000000000000000000000000000000000001531 224.0
BYD3_k127_1883188_33 HxlR-like helix-turn-helix - - - 0.000000000000000000000000000000000000000000000000000000000003555 216.0
BYD3_k127_1883188_34 Protein conserved in bacteria K13735 - - 0.0000000000000000000000000000000000000000000000001328 203.0
BYD3_k127_1883188_35 Rhodanese-like domain - - - 0.0000000000000000000000000000000000000000000000002417 182.0
BYD3_k127_1883188_36 Histidine kinase-like ATPases K17752 - 2.7.11.1 0.000000000000000000000000000000000000000000000003629 175.0
BYD3_k127_1883188_37 YCII-related domain - - - 0.00000000000000000000000000000000000000000000009363 173.0
BYD3_k127_1883188_38 Anti-anti-sigma regulatory factor (Antagonist of anti-sigma factor) K17762 - - 0.000000000000000000000000000000000000000000006338 177.0
BYD3_k127_1883188_39 UPF0126 domain - - - 0.0000000000000000000000000000000000000000002361 166.0
BYD3_k127_1883188_4 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 7.498e-195 617.0
BYD3_k127_1883188_40 Uncharacterised protein family UPF0066 - - - 0.0000000000000000000000000000000000000000002366 165.0
BYD3_k127_1883188_41 decarboxylase K01607 - 4.1.1.44 0.0000000000000000000000000000000000000000002681 166.0
BYD3_k127_1883188_42 protein involved in exopolysaccharide biosynthesis K16554 - - 0.00000000000000000000000000000000000000003444 174.0
BYD3_k127_1883188_43 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000000003736 154.0
BYD3_k127_1883188_44 Putative lumazine-binding - - - 0.00000000000000000000000000000000000000494 151.0
BYD3_k127_1883188_45 COG1596 Periplasmic protein involved in polysaccharide export K01991 - - 0.0000000000000000000000000000000000000261 161.0
BYD3_k127_1883188_46 PQQ enzyme repeat - - - 0.00000000000000000000000000000000001158 154.0
BYD3_k127_1883188_47 peptidyl-tyrosine sulfation - - - 0.00000000000000000000000000000000002042 147.0
BYD3_k127_1883188_48 Integrin alpha (beta-propellor repeats). - - - 0.000000000000000000000000000001946 138.0
BYD3_k127_1883188_49 The glycine cleavage system catalyzes the degradation of glycine K00302,K00305,K00605,K06980 - 1.5.3.1,2.1.2.10 0.000000000000000000000000000003351 127.0
BYD3_k127_1883188_5 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004511 583.0
BYD3_k127_1883188_50 Sarcosine oxidase, delta subunit family K00304 - 1.5.3.1 0.00000000000000000000000000002346 128.0
BYD3_k127_1883188_51 Belongs to the glycosyl hydrolase family 6 - - - 0.0000000000000000000000001471 122.0
BYD3_k127_1883188_52 Membrane protein involved in the export of O-antigen and teichoic acid - - - 0.0000000000000000000000002146 121.0
BYD3_k127_1883188_53 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000205 103.0
BYD3_k127_1883188_54 SnoaL-like domain - - - 0.0000000000000000000000294 104.0
BYD3_k127_1883188_55 - - - - 0.0000000000000000000001393 111.0
BYD3_k127_1883188_56 Cytochrome P460 - - - 0.0000000000000000000007766 103.0
BYD3_k127_1883188_57 - - - - 0.00000000000000001962 88.0
BYD3_k127_1883188_58 Anti-sigma regulatory factor (Ser Thr protein kinase) K17752 - 2.7.11.1 0.0000000000000009194 90.0
BYD3_k127_1883188_6 Uncharacterised MFS-type transporter YbfB - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002636 535.0
BYD3_k127_1883188_60 Putative beta-barrel porin 2 - - - 0.0000000000001819 84.0
BYD3_k127_1883188_62 - - - - 0.00000006132 53.0
BYD3_k127_1883188_7 TonB-dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 491.0
BYD3_k127_1883188_8 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007553 503.0
BYD3_k127_1883188_9 Sarcosine oxidase, subunit beta K00303 - 1.5.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001177 473.0
BYD3_k127_1900232_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 381.0
BYD3_k127_1900232_1 Subtilase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005509 317.0
BYD3_k127_1900232_2 AntiSigma factor - - - 0.0000000000000000000000000000000000000000001547 174.0
BYD3_k127_1900232_3 Sigma-70, region 4 - - - 0.000000000000000000000000000000000000000001018 164.0
BYD3_k127_1962313_0 ABC transporter - - - 2.811e-279 886.0
BYD3_k127_1962313_1 Aminomethyltransferase folate-binding domain K15066 - 2.1.1.341 7.398e-226 724.0
BYD3_k127_1962313_10 cephalosporin-C deacetylase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001336 460.0
BYD3_k127_1962313_11 ABC-type multidrug transport system, ATPase component - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002863 429.0
BYD3_k127_1962313_12 ABC-2 type transporter K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007006 344.0
BYD3_k127_1962313_13 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004155 292.0
BYD3_k127_1962313_14 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003669 286.0
BYD3_k127_1962313_15 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007295 267.0
BYD3_k127_1962313_16 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000001253 203.0
BYD3_k127_1962313_17 ABC-2 family transporter protein - - - 0.00000000000000000000000000000000000000000000000000000008154 214.0
BYD3_k127_1962313_18 AI-2E family transporter - - - 0.0000000000000000000000000000000000000000000000000006836 199.0
BYD3_k127_1962313_19 HlyD membrane-fusion protein of T1SS K03543 - - 0.0000000000000000000000000000000000000000000000004415 182.0
BYD3_k127_1962313_2 DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation K05592 - 3.6.4.13 2.297e-203 654.0
BYD3_k127_1962313_20 Hemerythrin - - - 0.0000000000000000000000000000000000000000000009255 177.0
BYD3_k127_1962313_21 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.000000000000000000000000000000000000000000003611 169.0
BYD3_k127_1962313_22 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.0000000000000000000000000000000000000009568 151.0
BYD3_k127_1962313_23 Thioesterase - - - 0.000000000000000000000000000000000000003042 153.0
BYD3_k127_1962313_24 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000001285 143.0
BYD3_k127_1962313_25 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000000000000000000001776 147.0
BYD3_k127_1962313_26 Autotransporter beta-domain - - - 0.000000000000000000001923 109.0
BYD3_k127_1962313_27 Pilus assembly protein PilX K02673 - - 0.0000000000000001776 93.0
BYD3_k127_1962313_28 - - - - 0.0000000000003314 80.0
BYD3_k127_1962313_29 amine dehydrogenase activity - - - 0.00000000003562 71.0
BYD3_k127_1962313_3 PAS fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009019 606.0
BYD3_k127_1962313_4 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008 573.0
BYD3_k127_1962313_5 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001307 538.0
BYD3_k127_1962313_6 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 530.0
BYD3_k127_1962313_7 Outer membrane efflux protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001612 514.0
BYD3_k127_1962313_8 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003654 469.0
BYD3_k127_1962313_9 double-stranded DNA 3'-5' exodeoxyribonuclease activity K01142 GO:0003674,GO:0003824,GO:0003906,GO:0004518,GO:0004527,GO:0004529,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008296,GO:0008309,GO:0008311,GO:0008408,GO:0009987,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:1901360 3.1.11.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001415 441.0
BYD3_k127_1977470_0 Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B K02274 - 1.9.3.1 2.974e-281 871.0
BYD3_k127_1977470_1 PFAM GMC oxidoreductase - - - 7.185e-278 865.0
BYD3_k127_1977470_10 PFAM cytochrome c oxidase, subunit III K02276 - 1.9.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003217 361.0
BYD3_k127_1977470_11 Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group K02257 - 2.5.1.141 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001689 359.0
BYD3_k127_1977470_12 Galactose 1-dehydrogenase K00035 - 1.1.1.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857 351.0
BYD3_k127_1977470_13 Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) K02275,K02297 - 1.10.3.10,1.9.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003909 332.0
BYD3_k127_1977470_14 ABC transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004477 326.0
BYD3_k127_1977470_15 Peptidase family S41 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001829 307.0
BYD3_k127_1977470_16 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000005838 313.0
BYD3_k127_1977470_17 cytochrome oxidase assembly K02259 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000005103 305.0
BYD3_k127_1977470_18 lipoprotein biosynthetic process K13292 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003161 279.0
BYD3_k127_1977470_19 Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway K02169 - 2.1.1.197 0.000000000000000000000000000000000000000000000000000000000000000000000000001252 271.0
BYD3_k127_1977470_2 Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) K01649 - 2.3.3.13 7.259e-244 766.0
BYD3_k127_1977470_20 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000000000000000000000000000000000000000003303 237.0
BYD3_k127_1977470_21 PFAM 2-keto-3-deoxy-galactonokinase K00883 - 2.7.1.58 0.0000000000000000000000000000000000000000000000000000000000001314 224.0
BYD3_k127_1977470_22 AAA domain - - - 0.000000000000000000000000000000000000000000000000001432 192.0
BYD3_k127_1977470_23 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000000000000000008 186.0
BYD3_k127_1977470_24 PFAM KDPG and KHG aldolase K01631 GO:0003674,GO:0003824,GO:0005975,GO:0006082,GO:0008150,GO:0008152,GO:0008674,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016830,GO:0016832,GO:0019520,GO:0019583,GO:0019584,GO:0019752,GO:0032787,GO:0034192,GO:0034194,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044262,GO:0044275,GO:0044281,GO:0044282,GO:0046176,GO:0046395,GO:0071704,GO:0072329,GO:1901575 4.1.2.21 0.0000000000000000000000000000000000000000000000004549 194.0
BYD3_k127_1977470_25 PFAM blue (type 1) copper domain protein - - - 0.00000000000000000000000000000000000000000000003619 173.0
BYD3_k127_1977470_26 cytochrome c oxidase assembly protein K02258 - - 0.0000000000000000000000000000000000000000000002911 174.0
BYD3_k127_1977470_27 Competence protein - - - 0.000000000000000000000000000000000000000000228 169.0
BYD3_k127_1977470_28 - - - - 0.0000000000000000000000000000000000000001798 156.0
BYD3_k127_1977470_29 SURF1-like protein - - - 0.0000000000000000000000000000000000000001805 162.0
BYD3_k127_1977470_3 Insecticidal toxin complex protein TcaC - - - 3.395e-217 728.0
BYD3_k127_1977470_30 signal sequence binding - - - 0.000000000000000000000000000001327 133.0
BYD3_k127_1977470_31 Integral membrane protein (DUF2244) - - - 0.00000000000000002591 88.0
BYD3_k127_1977470_32 ORF6N domain - - - 0.000000000002571 73.0
BYD3_k127_1977470_33 - K01611 - 4.1.1.50 0.0000000000593 76.0
BYD3_k127_1977470_34 Protein of unknown function (DUF2909) - - - 0.000000007452 64.0
BYD3_k127_1977470_35 - - - - 0.0004119 48.0
BYD3_k127_1977470_4 Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family K03307 - - 4.552e-215 678.0
BYD3_k127_1977470_5 NMT1-like family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001165 504.0
BYD3_k127_1977470_6 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 - 1.2.1.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007343 476.0
BYD3_k127_1977470_7 Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism K01012 - 2.8.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003374 471.0
BYD3_k127_1977470_8 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00652 - 2.3.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003454 421.0
BYD3_k127_1977470_9 Binding-protein-dependent transport system inner membrane component K02050,K15552,K15554 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005867 394.0
BYD3_k127_1978827_0 E1 component of the oxoglutarate dehydrogenase complex which catalyzes the formation of succinyl-CoA from 2-oxoglutarate K00164 - 1.2.4.2 1.468e-203 646.0
BYD3_k127_1978827_1 E3 component of 2-oxoglutarate dehydrogenase complex K00382 - 1.8.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001614 576.0
BYD3_k127_1978827_10 metallopeptidase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 297.0
BYD3_k127_1978827_11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007043 277.0
BYD3_k127_1978827_12 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000231 278.0
BYD3_k127_1978827_13 COG0811 Biopolymer transport proteins K03562 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0015031,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0017038,GO:0030313,GO:0031224,GO:0031226,GO:0031975,GO:0032153,GO:0033036,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000006494 254.0
BYD3_k127_1978827_14 Mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000007328 246.0
BYD3_k127_1978827_15 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB K03550 - 3.6.4.12 0.00000000000000000000000000000000000000000000000000000000000105 224.0
BYD3_k127_1978827_16 chlorophyll binding - - - 0.00000000000000000000000000000000000000000000000000001367 201.0
BYD3_k127_1978827_17 Protein of unknown function (DUF421) - - - 0.00000000000000000000000000000000000000000000001633 175.0
BYD3_k127_1978827_18 Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division - - - 0.000000000000000000000000000000000000000000001705 176.0
BYD3_k127_1978827_19 Biopolymer transport protein ExbD/TolR K03560 GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008150,GO:0015833,GO:0015893,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032153,GO:0042221,GO:0042493,GO:0042886,GO:0042891,GO:0043213,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051179,GO:0051234,GO:0071702,GO:0071705,GO:0071944 - 0.0000000000000000000000000000000000000005218 155.0
BYD3_k127_1978827_2 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K00951 - 2.7.6.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007822 547.0
BYD3_k127_1978827_20 Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group K01159 GO:0000725,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004536,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006281,GO:0006310,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008821,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009987,GO:0016787,GO:0016788,GO:0016889,GO:0016894,GO:0031297,GO:0032991,GO:0033554,GO:0034641,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0045005,GO:0046483,GO:0048476,GO:0050896,GO:0051716,GO:0071704,GO:0071932,GO:0090304,GO:0090305,GO:0140097,GO:1901360,GO:1901576 3.1.22.4 0.00000000000000000000000000000000000004353 164.0
BYD3_k127_1978827_21 Belongs to the ompA family K03640 - - 0.0000000000000000000000000000000000001059 147.0
BYD3_k127_1978827_22 Lanthionine synthetase C family protein - - - 0.0000000000000000000000000000000000007022 151.0
BYD3_k127_1978827_23 system-associated acyl-CoA thioesterase K07107 - - 0.000000000000000000000000000000001741 146.0
BYD3_k127_1978827_24 Transglycosylase associated protein - - - 0.00000000000000000000000000000008519 126.0
BYD3_k127_1978827_25 Belongs to the UPF0337 (CsbD) family - - - 0.0000000000000000002196 91.0
BYD3_k127_1978827_27 Domain of unknown function (DUF4142) K08995 - - 0.00000000001063 74.0
BYD3_k127_1978827_28 TIGRFAM Diguanylate cyclase - - - 0.0000000003842 71.0
BYD3_k127_1978827_29 Tol-Pal system TolA K03646 - - 0.000000008719 67.0
BYD3_k127_1978827_3 The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing K03551 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 511.0
BYD3_k127_1978827_30 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.00000002358 67.0
BYD3_k127_1978827_31 Bacterial protein of unknown function (DUF883) - - - 0.00000003991 65.0
BYD3_k127_1978827_32 Chromosome partitioning protein ParA - - - 0.0000002539 60.0
BYD3_k127_1978827_4 The 2-oxoglutarate dehydrogenase complex catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and CO(2) K00658 - 2.3.1.61 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006031 490.0
BYD3_k127_1978827_5 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K08139 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008788 441.0
BYD3_k127_1978827_6 Involved in the TonB-independent uptake of proteins K03641 GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0006810,GO:0008104,GO:0008150,GO:0009719,GO:0009987,GO:0010033,GO:0010243,GO:0015031,GO:0015833,GO:0015893,GO:0017038,GO:0019904,GO:0030288,GO:0030313,GO:0031975,GO:0032153,GO:0032991,GO:0033036,GO:0042221,GO:0042493,GO:0042597,GO:0042886,GO:0042891,GO:0043213,GO:0044464,GO:0044877,GO:0045184,GO:0046677,GO:0046678,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0070887,GO:0071236,GO:0071237,GO:0071310,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006878 393.0
BYD3_k127_1978827_7 response regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 350.0
BYD3_k127_1978827_8 Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) K06920 - 6.3.4.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001783 331.0
BYD3_k127_1978827_9 Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds K10026 - 4.3.99.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001499 321.0
BYD3_k127_2000164_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000037 491.0
BYD3_k127_2000164_1 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000004454 215.0
BYD3_k127_2000164_2 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000002609 203.0
BYD3_k127_2000164_3 bis(5'-adenosyl)-triphosphatase activity K02503 - - 0.0000000000000000000000000000000000000000000000000003538 196.0
BYD3_k127_2000164_4 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000000915 182.0
BYD3_k127_2000164_5 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000000000000000000000000004147 183.0
BYD3_k127_2000164_6 - - - - 0.0000000000000000007479 91.0
BYD3_k127_2000164_7 - - - - 0.00000000000001865 83.0
BYD3_k127_2088820_0 Belongs to the glycosyl hydrolase 31 family K01811 - 3.2.1.177 0.0 1205.0
BYD3_k127_2088820_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01869 - 6.1.1.4 0.0 1142.0
BYD3_k127_2088820_10 Cobalamin-independent synthase, Catalytic domain K00549,K22363 - 2.1.1.14,4.4.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003991 547.0
BYD3_k127_2088820_11 peptidase U62, modulator of DNA gyrase K03592 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004763 541.0
BYD3_k127_2088820_12 E COG0620 Methionine synthase II (cobalamin-independent) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003743 515.0
BYD3_k127_2088820_13 Glycosyl Hydrolase Family 88 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001988 479.0
BYD3_k127_2088820_14 carnitine dehydratase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007302 489.0
BYD3_k127_2088820_15 Belongs to the peptidase S33 family K01259 - 3.4.11.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002168 463.0
BYD3_k127_2088820_16 Protein of unknown function (DUF1624) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006433 439.0
BYD3_k127_2088820_17 ribosomal rna small subunit methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001043 447.0
BYD3_k127_2088820_18 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002222 445.0
BYD3_k127_2088820_19 Major facilitator superfamily K02429 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002241 434.0
BYD3_k127_2088820_2 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 4.103e-254 791.0
BYD3_k127_2088820_20 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K05548 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 431.0
BYD3_k127_2088820_21 PFAM PhoH-like protein K06217 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004744 413.0
BYD3_k127_2088820_22 transcriptional regulator K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000257 393.0
BYD3_k127_2088820_23 Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR) K01589 - 6.3.4.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004743 391.0
BYD3_k127_2088820_24 Saccharopine dehydrogenase NADP binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002551 376.0
BYD3_k127_2088820_25 TonB-dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002257 387.0
BYD3_k127_2088820_26 Transfers the fatty acyl group on membrane lipoproteins K03820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004924 368.0
BYD3_k127_2088820_27 WYL domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001482 351.0
BYD3_k127_2088820_28 PFAM aldo keto reductase K00064 - 1.1.1.122 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003562 373.0
BYD3_k127_2088820_29 methyltransferase K15942 - 2.1.1.288 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005821 339.0
BYD3_k127_2088820_3 TonB-dependent receptor - - - 3.766e-251 794.0
BYD3_k127_2088820_30 PKHD-type hydroxylase K07336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001185 333.0
BYD3_k127_2088820_31 AraC family transcriptional regulator K13652 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 332.0
BYD3_k127_2088820_32 metal-dependent hydrolase of the TIM-barrel fold K07046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000145 334.0
BYD3_k127_2088820_33 RibD C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001658 328.0
BYD3_k127_2088820_34 Enoyl-(Acyl carrier protein) reductase K18335 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 322.0
BYD3_k127_2088820_35 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K11206 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 311.0
BYD3_k127_2088820_36 Citrate synthase, C-terminal domain K01647 - 2.3.3.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001814 313.0
BYD3_k127_2088820_37 Type II secretory pathway component ExeA K02450,K12283 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001672 308.0
BYD3_k127_2088820_38 PFAM CBS domain K06189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001725 304.0
BYD3_k127_2088820_39 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 302.0
BYD3_k127_2088820_4 Cytochrome C biogenesis protein transmembrane region K04084,K08344 - 1.8.1.8 1.281e-228 729.0
BYD3_k127_2088820_40 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004608 275.0
BYD3_k127_2088820_41 Belongs to the WrbA family K03809 - 1.6.5.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001591 271.0
BYD3_k127_2088820_42 Methyltransferase domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008965 270.0
BYD3_k127_2088820_43 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001017 261.0
BYD3_k127_2088820_44 helix_turn_helix isocitrate lyase regulation - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001595 248.0
BYD3_k127_2088820_45 Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) K01588 - 5.4.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000005181 240.0
BYD3_k127_2088820_46 DNA polymerase III, delta subunit K02340 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000006559 244.0
BYD3_k127_2088820_47 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000001968 224.0
BYD3_k127_2088820_48 PFAM peptidase M48 Ste24p - - - 0.0000000000000000000000000000000000000000000000000000000000003563 235.0
BYD3_k127_2088820_49 Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) K00969,K01488 GO:0000309,GO:0003674,GO:0003824,GO:0004515,GO:0006082,GO:0006139,GO:0006520,GO:0006531,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009066,GO:0009108,GO:0009117,GO:0009165,GO:0009435,GO:0009987,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019355,GO:0019359,GO:0019362,GO:0019363,GO:0019365,GO:0019438,GO:0019637,GO:0019674,GO:0019752,GO:0034355,GO:0034627,GO:0034628,GO:0034641,GO:0034654,GO:0043094,GO:0043173,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046483,GO:0046496,GO:0051186,GO:0051188,GO:0055086,GO:0070566,GO:0071704,GO:0072524,GO:0072525,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.7.18,3.5.4.4 0.0000000000000000000000000000000000000000000000000000000000004524 218.0
BYD3_k127_2088820_5 TonB dependent receptor K16090 GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0009279,GO:0015688,GO:0015833,GO:0015891,GO:0015893,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0042221,GO:0042493,GO:0042884,GO:0042886,GO:0042891,GO:0044462,GO:0044464,GO:0050896,GO:0051179,GO:0051181,GO:0051234,GO:0071702,GO:0071705,GO:0071944,GO:1901678 - 6.923e-223 715.0
BYD3_k127_2088820_50 Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism K03111 - - 0.000000000000000000000000000000000000000000000000000000000006753 212.0
BYD3_k127_2088820_51 Maf-like protein K06287 - - 0.000000000000000000000000000000000000000000000000000000002271 205.0
BYD3_k127_2088820_52 transcriptional regulator K02624 - - 0.000000000000000000000000000000000000000000000000000000003388 208.0
BYD3_k127_2088820_53 Uracil DNA glycosylase superfamily - - - 0.00000000000000000000000000000000000000000000000000000001944 202.0
BYD3_k127_2088820_54 - - - - 0.000000000000000000000000000000000000000000000000000009243 204.0
BYD3_k127_2088820_55 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.00000000000000000000000000000000000000000000000000005373 193.0
BYD3_k127_2088820_56 HIT domain K02503 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006522,GO:0006524,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009078,GO:0009080,GO:0009987,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019478,GO:0019752,GO:0043436,GO:0043530,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046144,GO:0046395,GO:0046416,GO:0046436,GO:0055130,GO:0071704,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 - 0.000000000000000000000000000000000000000000000000006281 184.0
BYD3_k127_2088820_57 Alpha beta - - - 0.0000000000000000000000000000000000000000006477 167.0
BYD3_k127_2088820_58 Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA K00783 - 2.1.1.177 0.00000000000000000000000000000000000000003174 158.0
BYD3_k127_2088820_59 Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation K09710 - - 0.0000000000000000000000000000000000014 143.0
BYD3_k127_2088820_6 modulator of DNA gyrase K03568 - - 1.434e-209 661.0
BYD3_k127_2088820_60 NUDIX domain - - - 0.000000000000000000000000000000000008 141.0
BYD3_k127_2088820_61 Bacterial protein of unknown function (DUF922) - - - 0.0000000000000000000000000000000009745 137.0
BYD3_k127_2088820_62 Sigma-70 region 2 - - - 0.0000000000000000000000000000003544 128.0
BYD3_k127_2088820_63 Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA K07042 - - 0.000000000000000000000000000001277 138.0
BYD3_k127_2088820_64 - - - - 0.0000000000000000000000000008381 113.0
BYD3_k127_2088820_65 - - - - 0.000000000000000000000000003726 113.0
BYD3_k127_2088820_66 Belongs to the UPF0307 family K09889 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000002607 117.0
BYD3_k127_2088820_67 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000002431 100.0
BYD3_k127_2088820_69 Sigma-70 region 2 K03088 - - 0.000000000000002359 87.0
BYD3_k127_2088820_7 GMC oxidoreductase - - - 2.839e-204 649.0
BYD3_k127_2088820_70 - - - - 0.0000000000001226 79.0
BYD3_k127_2088820_71 Lipopolysaccharide-assembly - - - 0.0000000000002393 82.0
BYD3_k127_2088820_72 ECF sigma factor K03088 - - 0.000000000001157 79.0
BYD3_k127_2088820_73 Domain of unknown function (DUF4880) K07165 - - 0.000002753 59.0
BYD3_k127_2088820_74 Protein of unknown function - - - 0.00001934 59.0
BYD3_k127_2088820_8 Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine K06168 - 2.8.4.3 3.344e-199 630.0
BYD3_k127_2088820_9 COG1530 Ribonucleases G and E K08301 GO:0003674,GO:0003824,GO:0004518,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005856,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008996,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016787,GO:0016788,GO:0022613,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005241 601.0
BYD3_k127_2301379_0 SMP-30/Gluconolaconase/LRE-like region - - - 3.029e-275 879.0
BYD3_k127_2301379_1 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007247 561.0
BYD3_k127_2301379_2 Catalyzes the synthesis of GMP from XMP K01951 - 6.3.5.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002518 429.0
BYD3_k127_2301379_3 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001356 375.0
BYD3_k127_2301379_4 bacterial-type flagellum-dependent cell motility - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 379.0
BYD3_k127_2301379_5 ECF sigma factor - - - 0.00000000000000000000000000000000000000006453 160.0
BYD3_k127_2301379_6 - - - - 0.0000000000000000024 92.0
BYD3_k127_2301379_7 Glyco_18 K01183 - 3.2.1.14 0.0000005152 64.0
BYD3_k127_2301379_8 40-residue YVTN family beta-propeller repeat - - - 0.00001397 59.0
BYD3_k127_2308008_0 Nitric oxide reductase large subunit K04561 - 1.7.2.5 0.0 1213.0
BYD3_k127_2308008_1 arylsulfatase activity - - - 0.0 1074.0
BYD3_k127_2308008_10 Belongs to the aldehyde dehydrogenase family K00128 - 1.2.1.3 1.558e-214 674.0
BYD3_k127_2308008_100 Domain of unknown function (DUF4154) - - - 0.000000000000000000000000000000000004008 144.0
BYD3_k127_2308008_101 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000000000000001072 140.0
BYD3_k127_2308008_102 Transglycosylase associated protein - - - 0.00000000000000000000000000000000001886 138.0
BYD3_k127_2308008_103 BON domain K04065 - - 0.00000000000000000000000000000001854 130.0
BYD3_k127_2308008_104 PFAM DoxX family protein K15977 - - 0.000000000000000000000000000002044 124.0
BYD3_k127_2308008_105 Yip1 domain - - - 0.00000000000000000000000000001733 126.0
BYD3_k127_2308008_106 Ethanolamine utilisation protein EutQ K04030 - - 0.0000000000000000000000000000586 120.0
BYD3_k127_2308008_107 Belongs to the anti-sigma-factor antagonist family - - - 0.0000000000000000000000000001873 121.0
BYD3_k127_2308008_108 Domain in cystathionine beta-synthase and other proteins. - - - 0.0000000000000000000000001856 113.0
BYD3_k127_2308008_109 Domain of unknown function (DUF4266) - - - 0.0000000000000000000000003136 106.0
BYD3_k127_2308008_11 Belongs to the anaerobic coproporphyrinogen-III oxidase family - - - 1.206e-206 657.0
BYD3_k127_2308008_110 PFAM Cell wall hydrolase - - - 0.000000000000000000000001164 111.0
BYD3_k127_2308008_111 flavin-nucleotide-binding protein structurally related to pyridoxine 5'-phosphate oxidase K07006 - - 0.000000000000000000000001262 105.0
BYD3_k127_2308008_112 Universal stress protein - - - 0.000000000000000000003748 102.0
BYD3_k127_2308008_113 Thioredoxin-like - - - 0.00000000000000000008584 91.0
BYD3_k127_2308008_114 C-terminal domain of CHU protein family K20276 - - 0.000000000000000001516 101.0
BYD3_k127_2308008_115 Domain of unknown function (DUF4398) - - - 0.000000000000000002269 89.0
BYD3_k127_2308008_117 - - - - 0.00000000000005549 77.0
BYD3_k127_2308008_118 Transglycosylase associated protein - - - 0.0000000000007459 69.0
BYD3_k127_2308008_119 Protein required for attachment to host cells - - - 0.00000000002449 74.0
BYD3_k127_2308008_12 Histidine kinase - - - 3.385e-204 666.0
BYD3_k127_2308008_120 PFAM SMP-30 Gluconolaconase K01219 - 3.2.1.81 0.0000000000338 77.0
BYD3_k127_2308008_121 Histidine kinase A domain protein - - - 0.000000005411 63.0
BYD3_k127_2308008_122 Tetratricopeptide repeat - - - 0.000000009078 57.0
BYD3_k127_2308008_123 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.00000002392 63.0
BYD3_k127_2308008_124 EF-hand domain pair - - - 0.0000001736 60.0
BYD3_k127_2308008_125 SnoaL-like domain - - - 0.0000008931 52.0
BYD3_k127_2308008_126 Domain of unknown function (DUF4404) - - - 0.00001341 53.0
BYD3_k127_2308008_127 - - - - 0.00001659 55.0
BYD3_k127_2308008_13 epoxide hydrolase - - - 2.807e-196 620.0
BYD3_k127_2308008_14 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 612.0
BYD3_k127_2308008_15 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009607 589.0
BYD3_k127_2308008_16 Amidohydrolase family K01487 - 3.5.4.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001053 584.0
BYD3_k127_2308008_17 thymidine phosphorylase K00758 - 2.4.2.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001047 552.0
BYD3_k127_2308008_18 Carbon-nitrogen hydrolase K01502 - 3.5.5.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001601 528.0
BYD3_k127_2308008_19 Beta-Casp domain K07576 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002477 533.0
BYD3_k127_2308008_2 Alkaline phosphatase - - - 1e-322 1015.0
BYD3_k127_2308008_20 Ca-dependent carbohydrate-binding module xylan-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 541.0
BYD3_k127_2308008_21 TonB-dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006536 535.0
BYD3_k127_2308008_22 UPF0365 protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002973 492.0
BYD3_k127_2308008_23 protein involved in response to NO K07234 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005166 514.0
BYD3_k127_2308008_24 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001145 493.0
BYD3_k127_2308008_25 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003833 477.0
BYD3_k127_2308008_26 NfeD-like C-terminal, partner-binding K07403 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001024 445.0
BYD3_k127_2308008_27 dioxygenase K15777 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000115 410.0
BYD3_k127_2308008_28 MacB-like periplasmic core domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005576 408.0
BYD3_k127_2308008_29 His Kinase A (phosphoacceptor) domain K02482 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002703 419.0
BYD3_k127_2308008_3 Amidohydrolase family - - - 4.833e-271 848.0
BYD3_k127_2308008_30 Di-glucose binding within endoplasmic reticulum - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016 398.0
BYD3_k127_2308008_31 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005849 393.0
BYD3_k127_2308008_32 PFAM ABC transporter related K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001063 379.0
BYD3_k127_2308008_33 PFAM Cyclic nucleotide-binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008044 376.0
BYD3_k127_2308008_34 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002373 372.0
BYD3_k127_2308008_35 Short chain dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007162 366.0
BYD3_k127_2308008_36 Xylose isomerase-like TIM barrel - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004716 360.0
BYD3_k127_2308008_37 Protein of unknown function (DUF3570) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002028 368.0
BYD3_k127_2308008_38 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000491 362.0
BYD3_k127_2308008_39 domain, Protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005524 353.0
BYD3_k127_2308008_4 Fungalysin metallopeptidase (M36) K01417 - - 5.02e-264 839.0
BYD3_k127_2308008_40 ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002543 347.0
BYD3_k127_2308008_41 Putative ABC exporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004984 355.0
BYD3_k127_2308008_42 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003049 344.0
BYD3_k127_2308008_43 ApbE family K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003446 329.0
BYD3_k127_2308008_44 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002195 312.0
BYD3_k127_2308008_45 methyl-accepting chemotaxis protein K07315 - 3.1.3.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002179 338.0
BYD3_k127_2308008_46 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003911 321.0
BYD3_k127_2308008_47 isochorismatase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005824 318.0
BYD3_k127_2308008_48 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 315.0
BYD3_k127_2308008_49 cAMP biosynthetic process K03641 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000275 317.0
BYD3_k127_2308008_5 heavy metal translocating P-type ATPase K17686 - 3.6.3.54 7.085e-254 805.0
BYD3_k127_2308008_50 Protein phosphatase 2A homologues, catalytic domain. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 304.0
BYD3_k127_2308008_51 ABC transporter K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002878 291.0
BYD3_k127_2308008_52 PFAM cytochrome B561 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 288.0
BYD3_k127_2308008_53 Belongs to the ribose-phosphate pyrophosphokinase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001632 290.0
BYD3_k127_2308008_54 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000421 292.0
BYD3_k127_2308008_55 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001012 291.0
BYD3_k127_2308008_56 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001809 293.0
BYD3_k127_2308008_57 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001132 290.0
BYD3_k127_2308008_58 peptide methionine sulfoxide reductase K07305 - 1.8.4.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002516 270.0
BYD3_k127_2308008_59 CorA-like Mg2+ transporter protein K03284 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005259 287.0
BYD3_k127_2308008_6 Multicopper oxidase K00368 - 1.7.2.1 1.17e-250 781.0
BYD3_k127_2308008_60 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003002 292.0
BYD3_k127_2308008_61 signal peptide protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001175 271.0
BYD3_k127_2308008_62 NnrU protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001943 266.0
BYD3_k127_2308008_63 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008534 270.0
BYD3_k127_2308008_64 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001275 269.0
BYD3_k127_2308008_65 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002439 264.0
BYD3_k127_2308008_66 Crp-like helix-turn-helix domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000006824 259.0
BYD3_k127_2308008_67 Arginase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001513 252.0
BYD3_k127_2308008_68 Zn_pept K05996 - 3.4.17.18 0.000000000000000000000000000000000000000000000000000000000000000000001274 265.0
BYD3_k127_2308008_69 Domain of unknown function (DUF4398) - - - 0.000000000000000000000000000000000000000000000000000000000000000000002788 248.0
BYD3_k127_2308008_7 receptor - - - 5.036e-245 791.0
BYD3_k127_2308008_70 Protein involved in outer membrane biogenesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000111 249.0
BYD3_k127_2308008_71 Histidine kinase internal region - - - 0.000000000000000000000000000000000000000000000000000000000000000001526 243.0
BYD3_k127_2308008_72 von Willebrand factor (vWF) type A domain - - - 0.00000000000000000000000000000000000000000000000000000000000000001111 246.0
BYD3_k127_2308008_73 phosphorelay signal transduction system K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000002378 241.0
BYD3_k127_2308008_74 Ferritin-like domain K04047 - - 0.00000000000000000000000000000000000000000000000000000000000000006751 228.0
BYD3_k127_2308008_75 Redoxin - - - 0.0000000000000000000000000000000000000000000000000000000000000008819 225.0
BYD3_k127_2308008_76 NAD(P)H-dependent FMN reductase K19784 - - 0.000000000000000000000000000000000000000000000000000000000000001476 223.0
BYD3_k127_2308008_77 Thioredoxin - - - 0.000000000000000000000000000000000000000000000000000000000000006739 222.0
BYD3_k127_2308008_78 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000000001212 208.0
BYD3_k127_2308008_79 Sodium/calcium exchanger protein K07301 - - 0.0000000000000000000000000000000000000000000000000000000002939 216.0
BYD3_k127_2308008_8 Oligoendopeptidase f - - - 1.305e-240 763.0
BYD3_k127_2308008_80 - - - - 0.00000000000000000000000000000000000000000000000000000001382 204.0
BYD3_k127_2308008_81 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity - - - 0.0000000000000000000000000000000000000000000000000000001444 198.0
BYD3_k127_2308008_82 Transcriptional regulator, Crp Fnr family - - - 0.0000000000000000000000000000000000000000000000000000009448 201.0
BYD3_k127_2308008_83 AraC-like ligand binding domain - - - 0.0000000000000000000000000000000000000000000000000000009588 201.0
BYD3_k127_2308008_84 AraC-like ligand binding domain - - - 0.000000000000000000000000000000000000000000000000000003088 201.0
BYD3_k127_2308008_85 Metallo-beta-lactamase superfamily - - - 0.00000000000000000000000000000000000000000000000000001319 200.0
BYD3_k127_2308008_86 protein histidine kinase activity K11527 - 2.7.13.3 0.0000000000000000000000000000000000000000000000006402 185.0
BYD3_k127_2308008_87 Thioredoxin - - - 0.000000000000000000000000000000000000000000000002433 179.0
BYD3_k127_2308008_88 helix_turn_helix, mercury resistance K19591 - - 0.00000000000000000000000000000000000000000000001025 174.0
BYD3_k127_2308008_89 negative regulation of transcription, DNA-templated - - - 0.00000000000000000000000000000000000000000000003216 177.0
BYD3_k127_2308008_9 COG0457 FOG TPR repeat - - - 2.158e-222 707.0
BYD3_k127_2308008_90 Invasion gene expression up-regulator, SirB - - - 0.0000000000000000000000000000000000000000000001207 173.0
BYD3_k127_2308008_91 Cupin domain - - - 0.00000000000000000000000000000000000000000002357 166.0
BYD3_k127_2308008_92 Domain of unknown function DUF302 - - - 0.0000000000000000000000000000000000000000051 168.0
BYD3_k127_2308008_93 Belongs to the universal stress protein A family - - - 0.00000000000000000000000000000000000000002462 164.0
BYD3_k127_2308008_94 Bacterial regulatory proteins, tetR family - - - 0.00000000000000000000000000000000000000009874 164.0
BYD3_k127_2308008_95 Transcriptional regulator K07978 - - 0.0000000000000000000000000000000000000002356 154.0
BYD3_k127_2308008_96 transferase activity, transferring acyl groups K14658,K15520,K17840,K18815 - 2.3.1.189,2.3.1.59,2.3.1.82 0.0000000000000000000000000000000000000127 150.0
BYD3_k127_2308008_97 SCO1/SenC K07152 - - 0.00000000000000000000000000000000000002433 161.0
BYD3_k127_2308008_98 Protein of unknown function (DUF861) - - - 0.0000000000000000000000000000000000002555 150.0
BYD3_k127_2308008_99 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.0000000000000000000000000000000000002932 149.0
BYD3_k127_2324976_0 aldehyde-lyase activity K01621 - 4.1.2.22,4.1.2.9 0.0 1309.0
BYD3_k127_2324976_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1294.0
BYD3_k127_2324976_10 Domain present in phytochromes and cGMP-specific phosphodiesterases. K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003561 421.0
BYD3_k127_2324976_11 (ABC) transporter K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001625 350.0
BYD3_k127_2324976_12 Belongs to the carbamate kinase family K00926 - 2.7.2.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 339.0
BYD3_k127_2324976_13 Putative peptidoglycan binding domain K21470 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 342.0
BYD3_k127_2324976_14 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005,K13888 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 337.0
BYD3_k127_2324976_15 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 318.0
BYD3_k127_2324976_16 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000793 306.0
BYD3_k127_2324976_17 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 302.0
BYD3_k127_2324976_18 PFAM Cyclic nucleotide-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006518 269.0
BYD3_k127_2324976_19 Predicted membrane protein (DUF2238) K08984 - - 0.000000000000000000000000000000000000000000000000000000000000000000000009447 248.0
BYD3_k127_2324976_2 ATPase, P-type (transporting), HAD superfamily, subfamily IC K01537 - 3.6.3.8 3.71e-273 865.0
BYD3_k127_2324976_20 Flavodoxin-like fold - - - 0.000000000000000000000000000000000000000000000000000000000000000001559 232.0
BYD3_k127_2324976_21 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000001755 230.0
BYD3_k127_2324976_22 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases - - - 0.00000000000000000000000000000000000000000000000000162 194.0
BYD3_k127_2324976_23 - - - - 0.000000000000000000000000000000000000000000005773 184.0
BYD3_k127_2324976_24 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.0000000000000000000000000000000000000001701 154.0
BYD3_k127_2324976_25 Domain of unknown function DUF302 - - - 0.00000000000000000000000000000000000005726 147.0
BYD3_k127_2324976_26 Universal stress protein family K14055 - - 0.0000000000000000000000000000000000001755 153.0
BYD3_k127_2324976_27 PFAM Cytochrome C - - - 0.0000000000000000000000000000000000004484 150.0
BYD3_k127_2324976_28 PFAM Cytochrome C - - - 0.000000000000000000000000000000000001532 147.0
BYD3_k127_2324976_29 Universal stress protein UspA and related nucleotide-binding K14055 - - 0.000000000000000000000000000000000002188 152.0
BYD3_k127_2324976_3 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions - - - 1.123e-246 772.0
BYD3_k127_2324976_30 PFAM Cytochrome C - - - 0.000000000000000000000000000000000002568 146.0
BYD3_k127_2324976_31 Universal stress protein family K14055 - - 0.0000000000000000000000000000000005268 145.0
BYD3_k127_2324976_32 redox protein, regulator of disulfide bond formation - - - 0.000000000000000000000000000000009211 139.0
BYD3_k127_2324976_33 Domain in cystathionine beta-synthase and other proteins. - - - 0.000000000000000000000000000001136 128.0
BYD3_k127_2324976_34 - - - - 0.000000000000000000000000000001389 125.0
BYD3_k127_2324976_35 CoA-binding domain protein K09181 - - 0.000000000000000000000000000002337 127.0
BYD3_k127_2324976_36 - - - - 0.00000000000000000000000000001524 124.0
BYD3_k127_2324976_37 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000158 108.0
BYD3_k127_2324976_38 FG-GAP repeat - - - 0.00000000000000000000000226 117.0
BYD3_k127_2324976_39 COG2010 Cytochrome c, mono- and diheme variants - - - 0.000000000000000000002327 101.0
BYD3_k127_2324976_4 COG0577 ABC-type antimicrobial peptide transport system permease component K02004 - - 5.957e-224 722.0
BYD3_k127_2324976_40 COG1734 DnaK suppressor protein - - - 0.000000000000003308 80.0
BYD3_k127_2324976_41 Putative Actinobacterial Holin-X, holin superfamily III - - - 0.000000005646 68.0
BYD3_k127_2324976_42 Protein of unknown function (DUF2934) - - - 0.00000000881 60.0
BYD3_k127_2324976_43 EF-hand domain pair - - - 0.0000001573 57.0
BYD3_k127_2324976_44 Universal stress protein K14055 - - 0.00001751 57.0
BYD3_k127_2324976_45 COPI associated protein - - - 0.0002787 48.0
BYD3_k127_2324976_5 Pyridine nucleotide-disulphide oxidoreductase K17218 - 1.8.5.4 2.733e-197 622.0
BYD3_k127_2324976_6 Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction K00925 - 2.7.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007956 614.0
BYD3_k127_2324976_7 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000944 517.0
BYD3_k127_2324976_8 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005513 433.0
BYD3_k127_2324976_9 Alcohol dehydrogenase GroES-like domain K13953 - 1.1.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001253 426.0
BYD3_k127_2417284_0 Belongs to the IlvD Edd family K13875 - 4.2.1.25 2.351e-303 938.0
BYD3_k127_2417284_1 TonB dependent receptor - - - 6.714e-246 777.0
BYD3_k127_2417284_10 Belongs to the binding-protein-dependent transport system permease family K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002486 395.0
BYD3_k127_2417284_11 Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate K01834 - 5.4.2.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001276 354.0
BYD3_k127_2417284_12 MoeA domain protein domain I and II K03750 - 2.10.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008482 357.0
BYD3_k127_2417284_13 PFAM Short-chain dehydrogenase reductase SDR K22185 - 1.1.1.175 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001496 338.0
BYD3_k127_2417284_14 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008101 337.0
BYD3_k127_2417284_15 Epoxide hydrolase K01253 - 3.3.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003124 331.0
BYD3_k127_2417284_16 Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety K00453 GO:0003674,GO:0003824,GO:0004833,GO:0005488,GO:0006082,GO:0006084,GO:0006139,GO:0006163,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009117,GO:0009150,GO:0009259,GO:0009308,GO:0009310,GO:0009987,GO:0016043,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0019439,GO:0019441,GO:0019442,GO:0019637,GO:0019693,GO:0019752,GO:0020037,GO:0022607,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0035383,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043436,GO:0043603,GO:0043933,GO:0044085,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0046906,GO:0048037,GO:0051186,GO:0051213,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055086,GO:0055114,GO:0065003,GO:0070189,GO:0071704,GO:0071840,GO:0072521,GO:0097159,GO:1901135,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 1.13.11.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002204 317.0
BYD3_k127_2417284_17 Phenylalanine-4-hydroxylase K00500 - 1.14.16.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000003102 271.0
BYD3_k127_2417284_18 COG3209 Rhs family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000005642 278.0
BYD3_k127_2417284_19 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K02056,K05776,K10441,K10539,K10542,K10545,K10548 - 3.6.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000001062 281.0
BYD3_k127_2417284_2 Part of an ABC transporter complex involved in carbohydrate import. Could be involved in ribose, galactose and or methyl galactoside import. Responsible for energy coupling to the transport system K02056,K10441 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001705 613.0
BYD3_k127_2417284_20 Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo- MPT) cofactor (Moco or molybdenum cofactor) to form Mo- molybdopterin guanine dinucleotide (Mo-MGD) cofactor K03752 - 2.7.7.77 0.00000000000000000000000000000000000000000000000000000000000000000000000000002954 275.0
BYD3_k127_2417284_21 Serine aminopeptidase, S33 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000005927 274.0
BYD3_k127_2417284_22 Lipid A biosynthesis K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000000000000000006931 262.0
BYD3_k127_2417284_23 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.00000000000000000000000000000000000000000000000000000000000000000000001958 261.0
BYD3_k127_2417284_24 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000000000000000000000000000000000001671 233.0
BYD3_k127_2417284_25 Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP) K03637 - 4.6.1.17 0.000000000000000000000000000000000000000000000000000001359 196.0
BYD3_k127_2417284_26 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.0000000000000000000000000000000000000000000000007166 178.0
BYD3_k127_2417284_27 helix_turn_helix ASNC type K03719 - - 0.000000000000000000000000000000000000000000000009319 177.0
BYD3_k127_2417284_28 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000003204 178.0
BYD3_k127_2417284_29 3-demethylubiquinone-9 3-methyltransferase - - - 0.0000000000000000000000000000000000000001854 156.0
BYD3_k127_2417284_3 TonB-dependent receptor plug K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 537.0
BYD3_k127_2417284_30 Nicotinamide mononucleotide transporter K03811 - - 0.00000000000000000000000000000001342 134.0
BYD3_k127_2417284_31 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000001269 121.0
BYD3_k127_2417284_32 2Fe-2S iron-sulfur cluster binding domain K04755 - - 0.000000000000000000000001145 116.0
BYD3_k127_2417284_33 Beta-lactamase - - - 0.00000000000000000000001944 115.0
BYD3_k127_2417284_34 - - - - 0.00000000000000000000006787 112.0
BYD3_k127_2417284_35 YKOF-related Family - - - 0.0000000000000000000001381 99.0
BYD3_k127_2417284_36 choline kinase involved in LPS biosynthesis - - - 0.00000000000000000005248 103.0
BYD3_k127_2417284_37 Regulator of ribonuclease activity B - - - 0.00000000005759 69.0
BYD3_k127_2417284_38 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000001587 63.0
BYD3_k127_2417284_4 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001816 490.0
BYD3_k127_2417284_40 May be involved in cell division K05803 - - 0.0000134 57.0
BYD3_k127_2417284_41 - - - - 0.0001095 50.0
BYD3_k127_2417284_5 Periplasmic binding protein-like domain K02058,K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001617 450.0
BYD3_k127_2417284_6 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 441.0
BYD3_k127_2417284_7 Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate K03639 - 4.1.99.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003382 427.0
BYD3_k127_2417284_8 Branched-chain amino acid transport system / permease component K02057 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006766 421.0
BYD3_k127_2417284_9 hydrolases or acyltransferases (alpha beta hydrolase superfamily) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001598 404.0
BYD3_k127_2451881_0 Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) K03655 - 3.6.4.12 6.246e-260 818.0
BYD3_k127_2451881_1 In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance K01139 - 2.7.6.5,3.1.7.2 6.705e-255 805.0
BYD3_k127_2451881_10 Essential for recycling GMP and indirectly, cGMP K00942 - 2.7.4.8 0.00000000000000000000000000000000000000000000000000000000000000000002615 238.0
BYD3_k127_2451881_11 Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions K02428 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009144,GO:0009146,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035870,GO:0036220,GO:0036222,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0046983,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 0.000000000000000000000000000000000000000000000000000000000000000002594 233.0
BYD3_k127_2451881_12 Sigma factor PP2C-like phosphatases K20074 - 3.1.3.16 0.000000000000000000000000000000000000000000000000003234 192.0
BYD3_k127_2451881_13 mRNA catabolic process - - - 0.0000000000000000000000000000000000000000000000001478 183.0
BYD3_k127_2451881_14 Endoribonuclease K09022 - 3.5.99.10 0.000000000000000000000000000000000000000000000002011 176.0
BYD3_k127_2451881_15 Binds the 23S rRNA K02909 - - 0.00000000000000000000000000113 116.0
BYD3_k127_2451881_16 Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits K03060 - 2.7.7.6 0.0000000000000000003604 99.0
BYD3_k127_2451881_17 TIGRFAM TonB family K03832 - - 0.00000000000000002832 91.0
BYD3_k127_2451881_2 penicillin-binding protein K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 9.883e-227 728.0
BYD3_k127_2451881_3 Belongs to the citrate synthase family K01647 - 2.3.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005201 606.0
BYD3_k127_2451881_4 fad dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001476 524.0
BYD3_k127_2451881_5 Involved in the biosynthesis of porphyrin-containing compound - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000684 409.0
BYD3_k127_2451881_6 Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates K00989 - 2.7.7.56 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007198 349.0
BYD3_k127_2451881_7 Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate K03179 - 2.5.1.39 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 306.0
BYD3_k127_2451881_8 Peptidase family M48 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000104 293.0
BYD3_k127_2451881_9 stress-induced protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001539 260.0
BYD3_k127_2628301_0 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 3.179e-278 871.0
BYD3_k127_2628301_1 Signal transduction histidine kinase K03407 - 2.7.13.3 1.763e-198 646.0
BYD3_k127_2628301_10 Flagellar motor protein K02557 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003965 300.0
BYD3_k127_2628301_11 flagellar K02404 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001709 289.0
BYD3_k127_2628301_12 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes K02405 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001944 277.0
BYD3_k127_2628301_13 Plays a role in the flagellum-specific transport system K02419 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002031 297.0
BYD3_k127_2628301_14 Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis K03411 - 3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000004188 245.0
BYD3_k127_2628301_15 Role in flagellar biosynthesis K02421 - - 0.00000000000000000000000000000000000000000000000000000000004373 213.0
BYD3_k127_2628301_16 response regulator K03413 - - 0.00000000000000000000000000000000000000000000000000000009398 197.0
BYD3_k127_2628301_17 HDOD domain - - - 0.000000000000000000000000000000000000000000000000001891 196.0
BYD3_k127_2628301_18 HDOD domain - - - 0.000000000000000000000000000000000000000000000001209 185.0
BYD3_k127_2628301_19 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000001239 179.0
BYD3_k127_2628301_2 catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins) by CheR K03412 - 3.1.1.61,3.5.1.44 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 467.0
BYD3_k127_2628301_20 chemotaxis signal transduction protein K03408 - - 0.000000000000000000000000000000000000000000005155 169.0
BYD3_k127_2628301_21 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.0000000000000000000000000000000000000000001111 160.0
BYD3_k127_2628301_22 Two component signalling adaptor domain K03408 - - 0.0000000000000000000000000000000000000000001489 166.0
BYD3_k127_2628301_23 Response regulator receiver K03413 - - 0.0000000000000000000000000000000000000000008407 160.0
BYD3_k127_2628301_24 Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P) K03414 - - 0.00000000000000000000000000000000000004836 152.0
BYD3_k127_2628301_25 Bacterial export proteins, family 3 K02420 - - 0.00000000000000000000000000000001645 129.0
BYD3_k127_2628301_26 HDOD domain - - - 0.0000000000000000000000000001875 130.0
BYD3_k127_2628301_27 Flagellar basal body-associated protein FliL - - - 0.000000000000000000000000001444 119.0
BYD3_k127_2628301_28 Metal dependent phosphohydrolases with conserved 'HD' motif. - - - 0.00000000000000000000003174 106.0
BYD3_k127_2628301_29 - - - - 0.00000000001378 71.0
BYD3_k127_2628301_3 methyl-accepting chemotaxis protein (MCP) K03406 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 482.0
BYD3_k127_2628301_30 flagellar K02418 - - 0.00000015 58.0
BYD3_k127_2628301_4 FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02416 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001952 398.0
BYD3_k127_2628301_5 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). K03406,K03776 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0007154,GO:0007165,GO:0008150,GO:0009453,GO:0009454,GO:0009605,GO:0009987,GO:0016020,GO:0023052,GO:0040011,GO:0042221,GO:0042330,GO:0042802,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0050918,GO:0051716,GO:0052128,GO:0052131,GO:0065007,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002948 419.0
BYD3_k127_2628301_6 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002635 336.0
BYD3_k127_2628301_7 this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004119 325.0
BYD3_k127_2628301_8 Belongs to the ParA family K04562 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004881 314.0
BYD3_k127_2628301_9 Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP K00575 - 2.1.1.80 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007458 305.0
BYD3_k127_2648898_0 ATP-dependent helicase K03579 - 3.6.4.13 2.068e-275 871.0
BYD3_k127_2648898_1 Protein conserved in bacteria - - - 3.342e-204 655.0
BYD3_k127_2648898_10 Amidohydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 319.0
BYD3_k127_2648898_11 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003128 297.0
BYD3_k127_2648898_12 Peptidase family S41 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000007971 284.0
BYD3_k127_2648898_13 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004677 275.0
BYD3_k127_2648898_14 Thioredoxin-like - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001538 281.0
BYD3_k127_2648898_15 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003825 253.0
BYD3_k127_2648898_16 PFAM Glyoxalase bleomycin resistance protein dioxygenase K05606 - 5.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000005044 240.0
BYD3_k127_2648898_17 Protein of unknown function (DUF418) K07148 - - 0.00000000000000000000000000000000000000000000000000000000001189 226.0
BYD3_k127_2648898_18 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.0000000000000000000000000000000000000000000000000000005035 206.0
BYD3_k127_2648898_19 Transcriptional regulator - - - 0.00000000000000000000000000000000000001299 151.0
BYD3_k127_2648898_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 571.0
BYD3_k127_2648898_20 protein homotetramerization - - - 0.00000000000000000000000000000000004442 149.0
BYD3_k127_2648898_21 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A - - - 0.000000000000000000000000000000003729 138.0
BYD3_k127_2648898_22 Auxin binding protein - - - 0.000000000000000000000000000004316 123.0
BYD3_k127_2648898_23 - - - - 0.000000000000000000000000000008293 123.0
BYD3_k127_2648898_24 Protein of unknown function (DUF2799) - - - 0.0000000000000000000000006227 111.0
BYD3_k127_2648898_25 transcriptional K07729 - - 0.00000000000000000000002047 103.0
BYD3_k127_2648898_26 Polymer-forming cytoskeletal - - - 0.00000000000000003423 85.0
BYD3_k127_2648898_27 - - - - 0.000000000006282 67.0
BYD3_k127_2648898_28 Polymer-forming cytoskeletal - - - 0.000000001154 66.0
BYD3_k127_2648898_3 Bacterial protein of unknown function (DUF839) K07093 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001443 555.0
BYD3_k127_2648898_4 Cellulase N-terminal ig-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004392 444.0
BYD3_k127_2648898_5 Redoxin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003846 399.0
BYD3_k127_2648898_6 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003792 344.0
BYD3_k127_2648898_7 LysR substrate binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000067 324.0
BYD3_k127_2648898_8 prohibitin homologues - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003508 319.0
BYD3_k127_2648898_9 Putative neutral zinc metallopeptidase K07054 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006077 304.0
BYD3_k127_2674326_0 Outer membrane receptor - - - 3.935e-312 985.0
BYD3_k127_2674326_1 Tryptophan halogenase K14266 - 1.14.19.9 5.95e-222 698.0
BYD3_k127_2674326_10 Beta/gamma crystallins - - - 0.0000000000000000000003719 112.0
BYD3_k127_2674326_11 - - - - 0.000000000000002484 78.0
BYD3_k127_2674326_2 Protein conserved in bacteria - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009897 599.0
BYD3_k127_2674326_3 PFAM glycoside hydrolase family 3 domain protein K05349 - 3.2.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000767 535.0
BYD3_k127_2674326_4 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004135 506.0
BYD3_k127_2674326_5 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.000000000000000000000000000000000000000000000000000000000000000000000000003683 261.0
BYD3_k127_2674326_6 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000007186 260.0
BYD3_k127_2674326_7 FAD dependent oxidoreductase K00285 - 1.4.5.1 0.0000000000000000000000000000000000000000000000000000000000000002802 235.0
BYD3_k127_2674326_8 Domain of unknown function (DUF4126) - - - 0.000000000000000000000000000000000000000000000000000000000001007 218.0
BYD3_k127_2674326_9 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000008303 179.0
BYD3_k127_2675219_0 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03046 - 2.7.7.6 0.0 1267.0
BYD3_k127_2675219_1 Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome K02355 - - 0.0 1047.0
BYD3_k127_2675219_10 methyltransferase activity K21310 - 2.1.1.334 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002301 351.0
BYD3_k127_2675219_11 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 353.0
BYD3_k127_2675219_12 NADP oxidoreductase coenzyme F420-dependent K06988 - 1.5.1.40 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001374 279.0
BYD3_k127_2675219_13 Belongs to the PAPS reductase family. CysH subfamily K00390 GO:0000103,GO:0003674,GO:0003824,GO:0004604,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016667,GO:0016671,GO:0019379,GO:0019419,GO:0044237,GO:0044424,GO:0044464,GO:0055114 1.8.4.10,1.8.4.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000312 286.0
BYD3_k127_2675219_14 Delta-aminolevulinic acid dehydratase K01698 - 4.2.1.24 0.000000000000000000000000000000000000000000000000000000000000000000004354 246.0
BYD3_k127_2675219_15 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA K02992 - - 0.00000000000000000000000000000000000000000000000000000000000003491 217.0
BYD3_k127_2675219_16 With S4 and S5 plays an important role in translational accuracy K02950 GO:0000372,GO:0000375,GO:0000376,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0015935,GO:0016070,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0031323,GO:0031325,GO:0032991,GO:0033120,GO:0034336,GO:0034337,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043484,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045935,GO:0046483,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990145,GO:1990904 - 0.00000000000000000000000000000000000000000000000000000000002759 209.0
BYD3_k127_2675219_17 Involved in the binding of tRNA to the ribosomes K02946 - - 0.000000000000000000000000000000000000000000000000292 177.0
BYD3_k127_2675219_18 - - - - 0.000000000000000000000000000006174 137.0
BYD3_k127_2675219_2 Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily K00955,K00956 - 2.7.1.25,2.7.7.4 2.247e-241 765.0
BYD3_k127_2675219_3 Nitrite and sulphite reductase 4Fe-4S domain K00381 - 1.8.1.2 9.353e-240 758.0
BYD3_k127_2675219_4 GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis K02358 - - 7.901e-225 700.0
BYD3_k127_2675219_5 Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component K00380 - 1.8.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001257 556.0
BYD3_k127_2675219_6 COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase and related enzymes K00957 - 2.7.7.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005202 443.0
BYD3_k127_2675219_7 Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme K02302,K02303 - 1.3.1.76,2.1.1.107,4.99.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 465.0
BYD3_k127_2675219_8 Belongs to the 'phage' integrase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003 407.0
BYD3_k127_2675219_9 transcriptional regulator K13634 GO:0003674,GO:0003676,GO:0003677,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0042802,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0097159,GO:1901363 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001124 357.0
BYD3_k127_275421_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 1.043e-310 969.0
BYD3_k127_275421_1 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 2.214e-233 730.0
BYD3_k127_275421_10 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000002442 258.0
BYD3_k127_275421_11 Aminoacyl-tRNA editing domain K03976 - - 0.000000000000000000000000000000000000000000000000000000000000000005317 228.0
BYD3_k127_275421_12 dioxygenase of extradiol dioxygenase family K06991 - - 0.0000000000000000000000000000000000000000000000000000000000000004496 221.0
BYD3_k127_275421_13 Sugar (and other) transporter K07552 - - 0.0000000000000000000000000000000000000000000000000000000000000004498 234.0
BYD3_k127_275421_14 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000005975 213.0
BYD3_k127_275421_15 Hemolysin III K11068 - - 0.00000000000000000000000000000000000000000000000000000004171 204.0
BYD3_k127_275421_16 Prokaryotic cytochrome b561 K12262 - - 0.000000000000000000000000000000000000000000000000004032 186.0
BYD3_k127_275421_17 - - - - 0.000000000000000000000000000000000000005851 150.0
BYD3_k127_275421_18 YceI-like domain - - - 0.00000000000000000000000000000000412 138.0
BYD3_k127_275421_19 YceI-like domain - - - 0.000000000000000000000000000000006329 136.0
BYD3_k127_275421_2 belongs to the aldehyde dehydrogenase family K00135 - 1.2.1.16,1.2.1.20,1.2.1.79 2.774e-224 704.0
BYD3_k127_275421_20 - - - - 0.00000000000000006007 91.0
BYD3_k127_275421_21 - - - - 0.000000000001892 74.0
BYD3_k127_275421_22 Glyoxalase-like domain - - - 0.00009032 53.0
BYD3_k127_275421_3 homogentisate 1,2-dioxygenase K00451 - 1.13.11.5 1.213e-196 617.0
BYD3_k127_275421_4 Belongs to the peptidase S1B family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006999 620.0
BYD3_k127_275421_5 Acetyl-CoA hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 612.0
BYD3_k127_275421_6 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004888 534.0
BYD3_k127_275421_7 COG0179 2-keto-4-pentenoate hydratase 2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) K16171 - 3.7.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006993 461.0
BYD3_k127_275421_8 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 378.0
BYD3_k127_275421_9 Dienelactone hydrolase family K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000007623 241.0
BYD3_k127_2821340_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - 0.0 1084.0
BYD3_k127_2821340_1 Protein of unknown function (DUF4038) - - - 0.0 1025.0
BYD3_k127_2821340_10 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000241 421.0
BYD3_k127_2821340_11 Membrane protein TerC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000607 358.0
BYD3_k127_2821340_12 D-isomer specific 2-hydroxyacid dehydrogenase K00018 - 1.1.1.29 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003828 333.0
BYD3_k127_2821340_13 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA K04761 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003089 314.0
BYD3_k127_2821340_14 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006982 308.0
BYD3_k127_2821340_15 Aldo/keto reductase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000007393 302.0
BYD3_k127_2821340_16 Outer membrane efflux protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004656 305.0
BYD3_k127_2821340_17 Biotin-lipoyl like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000005946 296.0
BYD3_k127_2821340_18 Redoxin K03386 - 1.11.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006159 280.0
BYD3_k127_2821340_19 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000001575 220.0
BYD3_k127_2821340_2 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 1.702e-301 953.0
BYD3_k127_2821340_20 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000000008964 234.0
BYD3_k127_2821340_21 Periplasmic binding protein - - - 0.000000000000000000000000000000000000000000000000000000006947 210.0
BYD3_k127_2821340_22 WHG domain - - - 0.00000000000000000000000000000000000000000000000000005117 194.0
BYD3_k127_2821340_23 Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity K04756 - - 0.00000000000000000000000000000000000000000000000000006965 198.0
BYD3_k127_2821340_24 Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ K09767 - - 0.00000000000000000000000000000000000000000000000000007467 198.0
BYD3_k127_2821340_25 Belongs to the peptidase S8 family - - - 0.0000000000000000000000000000000000000000000000000001233 203.0
BYD3_k127_2821340_26 Domain of unknown function (DUF1993) K09983 - - 0.0000000000000000000000000000000000000000000000002128 181.0
BYD3_k127_2821340_27 NUDIX domain - - - 0.00000000000000000000000000000000000000000000124 171.0
BYD3_k127_2821340_28 transcriptional regulator - - - 0.00000000000000000000000000000000000000000006215 171.0
BYD3_k127_2821340_29 HAD-superfamily hydrolase, subfamily IA, variant 3 - - - 0.0000000000000000000000000000000000000000542 169.0
BYD3_k127_2821340_3 Dienelactone hydrolase family - - - 4.417e-298 930.0
BYD3_k127_2821340_30 DNA-templated transcription, initiation K03088 - - 0.0000000000000000000000125 108.0
BYD3_k127_2821340_31 SPFH domain Band 7 family protein 4 - - - 0.00000000000000000000005556 109.0
BYD3_k127_2821340_32 CHAT domain - - - 0.00000000000000000001271 108.0
BYD3_k127_2821340_33 Putative diguanylate phosphodiesterase - - - 0.000000000000000001451 100.0
BYD3_k127_2821340_34 Response regulator of the LytR AlgR family K02477 - - 0.00000000000000008065 90.0
BYD3_k127_2821340_35 PFAM FeoA family protein K04758 - - 0.000000000004507 72.0
BYD3_k127_2821340_36 Protein of unknown function VcgC/VcgE (DUF2780) - - - 0.00000098 55.0
BYD3_k127_2821340_4 Ferrous iron transport protein B C terminus K04759 - - 5.425e-246 773.0
BYD3_k127_2821340_5 Tryptophan halogenase K14266 - 1.14.19.9 1.884e-229 721.0
BYD3_k127_2821340_6 acyl-CoA dehydrogenase K20035 - - 4.777e-198 634.0
BYD3_k127_2821340_7 AAA-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007167 586.0
BYD3_k127_2821340_8 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004638 486.0
BYD3_k127_2821340_9 Glycosyl hydrolase family 10 K01181 - 3.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005321 488.0
BYD3_k127_2961453_0 Glycosyl hydrolase family 65, N-terminal domain K15923 - 3.2.1.51 6.991e-264 835.0
BYD3_k127_2961453_1 Diguanylate cyclase - - - 1.035e-201 660.0
BYD3_k127_2961453_10 Domain of unknown function (DUF4252) - - - 0.0000000000000000000000000000002849 130.0
BYD3_k127_2961453_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000003045 131.0
BYD3_k127_2961453_12 membrane - - - 0.00000000000000000000000000001371 121.0
BYD3_k127_2961453_13 Domain of unknown function (DUF4252) - - - 0.0000000000000000000000000004439 121.0
BYD3_k127_2961453_14 Protein of unknown function (DUF3667) - - - 0.000000000000000000000001285 113.0
BYD3_k127_2961453_15 Cysteine-rich CPXCG - - - 0.000000000000007866 78.0
BYD3_k127_2961453_16 Intracellular proteinase inhibitor - - - 0.00006152 53.0
BYD3_k127_2961453_2 Acyl-CoA dehydrogenase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001041 572.0
BYD3_k127_2961453_3 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008656 436.0
BYD3_k127_2961453_4 PFAM Cytochrome P450 K14338 - 1.14.14.1,1.6.2.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008767 408.0
BYD3_k127_2961453_5 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007788 310.0
BYD3_k127_2961453_6 Glycosyl transferase family 2 K00721 - 2.4.1.83 0.000000000000000000000000000000000000000000000000000000000000000000000000000000132 283.0
BYD3_k127_2961453_7 Domain of unknown function (DUF3291) - - - 0.000000000000000000000000000000000000000000000000000000000000478 214.0
BYD3_k127_2961453_8 Domain of unknown function (DUF374) - - - 0.000000000000000000000000000000000000000000009668 172.0
BYD3_k127_2961453_9 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000000634 146.0
BYD3_k127_2994524_0 Domain of unknown function (DUF4331) - - - 3.226e-209 664.0
BYD3_k127_2994524_1 FAD binding domain K03391,K05712 - 1.14.13.127,1.14.13.50 6.701e-205 652.0
BYD3_k127_2994524_10 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001071 437.0
BYD3_k127_2994524_100 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins K03832 - - 0.0005209 50.0
BYD3_k127_2994524_101 TonB family K03832 - - 0.0006995 49.0
BYD3_k127_2994524_11 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002036 429.0
BYD3_k127_2994524_12 Trehalose utilisation K09992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004503 415.0
BYD3_k127_2994524_13 Glycosyl hydrolase family 10 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007813 422.0
BYD3_k127_2994524_14 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002693 426.0
BYD3_k127_2994524_15 Pyridoxal-phosphate dependent enzyme K01738 - 2.5.1.47 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007696 400.0
BYD3_k127_2994524_16 Amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 392.0
BYD3_k127_2994524_17 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007124 396.0
BYD3_k127_2994524_18 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes K03089 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004869 359.0
BYD3_k127_2994524_19 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007829 369.0
BYD3_k127_2994524_2 TonB dependent receptor - - - 7.642e-205 664.0
BYD3_k127_2994524_20 Carboxylesterase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004223 347.0
BYD3_k127_2994524_21 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03110 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005644 344.0
BYD3_k127_2994524_22 diguanylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006398 331.0
BYD3_k127_2994524_23 Transcriptional regulatory protein, C terminal K02483,K07663 GO:0000976,GO:0000984,GO:0000986,GO:0000987,GO:0001017,GO:0001067,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005515,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0042802,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001528 319.0
BYD3_k127_2994524_24 Esterase-like activity of phytase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009282 326.0
BYD3_k127_2994524_25 methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 315.0
BYD3_k127_2994524_26 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates K10563 - 3.2.2.23,4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006166 313.0
BYD3_k127_2994524_27 alpha/beta hydrolase fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001019 312.0
BYD3_k127_2994524_28 COG1073 Hydrolases of the alpha beta superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002007 329.0
BYD3_k127_2994524_29 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003479 293.0
BYD3_k127_2994524_3 ATPase components of ABC transporters with duplicated ATPase domains K15738 - - 6.522e-204 653.0
BYD3_k127_2994524_30 Belongs to the UPF0758 family K03630 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002557 287.0
BYD3_k127_2994524_31 catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA K03439 - 2.1.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004363 288.0
BYD3_k127_2994524_32 Methionine biosynthesis protein MetW - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000005403 287.0
BYD3_k127_2994524_33 TIGRFAM Cell division ATP-binding protein FtsE K09812 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002126 271.0
BYD3_k127_2994524_34 Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) K00762 - 2.4.2.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002636 273.0
BYD3_k127_2994524_35 Glycosyltransferase like family 2 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001196 263.0
BYD3_k127_2994524_36 protocatechuate 3,4-dioxygenase activity K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000000000000000000000002595 258.0
BYD3_k127_2994524_37 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001004 274.0
BYD3_k127_2994524_38 Activator of Hsp90 ATPase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000007868 245.0
BYD3_k127_2994524_39 YMGG-like Gly-zipper K12216 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001072 250.0
BYD3_k127_2994524_4 choline dehydrogenase activity - - - 4.301e-197 629.0
BYD3_k127_2994524_40 Putative diguanylate phosphodiesterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001329 249.0
BYD3_k127_2994524_41 Putative 2OG-Fe(II) oxygenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005879 245.0
BYD3_k127_2994524_42 This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA K01520 - 3.6.1.23 0.00000000000000000000000000000000000000000000000000000000000000000000007447 244.0
BYD3_k127_2994524_43 Glutathione S-transferase, C-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001354 239.0
BYD3_k127_2994524_44 Surface antigen - - - 0.0000000000000000000000000000000000000000000000000000000000000000003636 244.0
BYD3_k127_2994524_45 His Kinase A (phosphoacceptor) domain - - - 0.00000000000000000000000000000000000000000000000000000000000005126 228.0
BYD3_k127_2994524_46 Part of the ABC transporter FtsEX involved in cellular division K09811 - - 0.0000000000000000000000000000000000000000000000000000000000002674 231.0
BYD3_k127_2994524_47 Esterase of the alpha-beta hydrolase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000003318 235.0
BYD3_k127_2994524_48 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000000000000000001593 207.0
BYD3_k127_2994524_49 Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate K00954 - 2.7.7.3 0.0000000000000000000000000000000000000000000000000000000166 209.0
BYD3_k127_2994524_5 Acyl-CoA dehydrogenase K00252 - 1.3.8.6 2.287e-196 617.0
BYD3_k127_2994524_50 Lactoylglutathione lyase K07032 - - 0.00000000000000000000000000000000000000000000000000000004025 201.0
BYD3_k127_2994524_52 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000007966 199.0
BYD3_k127_2994524_53 3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase K00567,K01247 - 2.1.1.63,3.2.2.21 0.00000000000000000000000000000000000000000000000000000009387 213.0
BYD3_k127_2994524_54 Methyltransferase FkbM domain - - - 0.00000000000000000000000000000000000000000000000000004367 204.0
BYD3_k127_2994524_55 Hydrolase - - - 0.0000000000000000000000000000000000000000000000000005486 194.0
BYD3_k127_2994524_56 Endoribonuclease L-PSP - - - 0.000000000000000000000000000000000000000000000002327 178.0
BYD3_k127_2994524_57 Protein of unknown function (DUF502) - - - 0.00000000000000000000000000000000000000000000002432 183.0
BYD3_k127_2994524_58 LytTr DNA-binding domain K02477,K07705 - - 0.00000000000000000000000000000000000000000000006277 178.0
BYD3_k127_2994524_59 Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle K08316 - 2.1.1.171 0.00000000000000000000000000000000000000000000008973 176.0
BYD3_k127_2994524_6 PFAM Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 3.204e-195 623.0
BYD3_k127_2994524_60 TIGRFAM alkylphosphonate utilization operon protein PhnA K06193 - - 0.0000000000000000000000000000000000000000000009094 167.0
BYD3_k127_2994524_61 Histidine kinase K08082 - 2.7.13.3 0.00000000000000000000000000000000000000000000178 179.0
BYD3_k127_2994524_62 MarC family integral membrane protein K05595 - - 0.000000000000000000000000000000000000000000008996 175.0
BYD3_k127_2994524_63 Protein of unknown function (DUF962) - - - 0.00000000000000000000000000000000000000000001019 171.0
BYD3_k127_2994524_64 hydrolase family 5 K01218 - 3.2.1.78 0.00000000000000000000000000000000000000000002172 183.0
BYD3_k127_2994524_65 Rhomboid family - - - 0.00000000000000000000000000000000000000000002175 175.0
BYD3_k127_2994524_66 Transcriptional - - - 0.000000000000000000000000000000000000000000188 163.0
BYD3_k127_2994524_67 Phosphorylase superfamily K01243 - 3.2.2.9 0.000000000000000000000000000000000000004679 153.0
BYD3_k127_2994524_68 Sensors of blue-light using FAD - - - 0.000000000000000000000000000000000000006494 153.0
BYD3_k127_2994524_69 lipolytic protein G-D-S-L family - - - 0.00000000000000000000000000000000000001625 162.0
BYD3_k127_2994524_7 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001072 496.0
BYD3_k127_2994524_70 Domain of unknown function (DUF4440) - - - 0.0000000000000000000000000000000000001914 158.0
BYD3_k127_2994524_71 - - - - 0.0000000000000000000000000000000000004161 148.0
BYD3_k127_2994524_72 Serine hydrolase involved in the detoxification of formaldehyde K01070 - 3.1.2.12 0.0000000000000000000000000000000000198 142.0
BYD3_k127_2994524_73 PD-(D/E)XK nuclease superfamily - - - 0.00000000000000000000000000000000003673 149.0
BYD3_k127_2994524_74 SnoaL-like domain - - - 0.000000000000000000000000000000003187 142.0
BYD3_k127_2994524_75 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases K03828 - - 0.00000000000000000000000000000003977 134.0
BYD3_k127_2994524_76 Belongs to the bacterial ribosomal protein bL28 family K02902 - - 0.000000000000000000000000000002139 121.0
BYD3_k127_2994524_77 Evidence 3 Function proposed based on presence of conserved amino acid motif, structural feature or limited homology - - - 0.00000000000000000000000000001145 138.0
BYD3_k127_2994524_78 Integrin alpha (beta-propellor repeats). - - - 0.000000000000000000000000001661 128.0
BYD3_k127_2994524_79 Protein conserved in bacteria - - - 0.000000000000000000000000002809 120.0
BYD3_k127_2994524_8 Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine K13038 - 4.1.1.36,6.3.2.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009932 472.0
BYD3_k127_2994524_80 Integrin alpha (beta-propellor repeats). - - - 0.00000000000000000000000002657 124.0
BYD3_k127_2994524_81 Rieske 2Fe-2S - - - 0.0000000000000000000000003201 110.0
BYD3_k127_2994524_83 - - - - 0.000000000000000000000005916 110.0
BYD3_k127_2994524_84 Domain of unknown function (DUF4184) - - - 0.00000000000000000000002016 112.0
BYD3_k127_2994524_85 Translation initiation factor SUI1 K03113 GO:0001731,GO:0002181,GO:0002183,GO:0002188,GO:0002190,GO:0002192,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043024,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070992,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0110017,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000002024 103.0
BYD3_k127_2994524_86 there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc K02913 - - 0.00000000000000000001827 91.0
BYD3_k127_2994524_87 Domain of unknown function (DUF4124) - - - 0.00000000000000001837 92.0
BYD3_k127_2994524_88 ExbD is part of the TonB-dependent transduction complex. The TonB complex uses the proton gradient across the inner bacterial membrane to transport large molecules across the outer bacterial membrane. InterPro Biopolymer transport protein ExbD TolR Pfam Biopolymer transport protein ExbD TolR no signal peptide K03559 - - 0.00000000000000002308 87.0
BYD3_k127_2994524_89 Dodecin K09165 - - 0.00000000000000003172 94.0
BYD3_k127_2994524_9 Major facilitator superfamily K08218 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001629 443.0
BYD3_k127_2994524_90 - - - - 0.0000000000000001148 88.0
BYD3_k127_2994524_91 Protein of unknown function (DUF2905) - - - 0.0000000000000001257 82.0
BYD3_k127_2994524_92 - - - - 0.0000000000006346 75.0
BYD3_k127_2994524_93 Parallel beta-helix repeats K12287 - - 0.0000000001122 70.0
BYD3_k127_2994524_97 Alpha amylase, catalytic domain - - - 0.0000001124 53.0
BYD3_k127_3002104_0 hydrolase, family 65, central catalytic - - - 7.098e-264 841.0
BYD3_k127_3002104_1 Homoserine dehydrogenase, NAD binding domain - - - 4.192e-196 621.0
BYD3_k127_3002104_10 Tetratricopeptide repeat - - - 0.000000000000000000000000000000006991 149.0
BYD3_k127_3002104_11 Haloacid dehalogenase-like hydrolase K07025 - - 0.0000000000000000000000000000002836 133.0
BYD3_k127_3002104_12 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.0000000000000000000000000004263 123.0
BYD3_k127_3002104_13 Lysine exporter protein LysE YggA K05834 - - 0.000000000000000000000000003972 118.0
BYD3_k127_3002104_14 cheY-homologous receiver domain - - - 0.000000000000000000003429 98.0
BYD3_k127_3002104_15 Hemerythrin HHE cation binding domain - - - 0.000000000000000007418 89.0
BYD3_k127_3002104_16 - - - - 0.0000002772 62.0
BYD3_k127_3002104_2 Trehalase K01194 - 3.2.1.28 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009183 572.0
BYD3_k127_3002104_3 alkaline phosphatase K01113 - 3.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000172 496.0
BYD3_k127_3002104_4 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003904 332.0
BYD3_k127_3002104_5 PFAM aldo keto reductase K06221 - 1.1.1.346 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002355 310.0
BYD3_k127_3002104_6 Prolyl oligopeptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000056 301.0
BYD3_k127_3002104_7 Histidine kinase-like ATPases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001655 298.0
BYD3_k127_3002104_8 Protein of unknown function (DUF1349) K09702 - - 0.000000000000000000000000000000000000000000004189 175.0
BYD3_k127_3002104_9 PRC-barrel domain - - - 0.000000000000000000000000000000000000000007703 163.0
BYD3_k127_3006314_0 MMPL family K18138,K18902 - - 0.0 1349.0
BYD3_k127_3006314_1 PFAM sulfatase K01130 - 3.1.6.1 0.0 1184.0
BYD3_k127_3006314_10 deiminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005703 534.0
BYD3_k127_3006314_11 RecA-superfamily ATPases implicated in signal transduction K08482 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003931 518.0
BYD3_k127_3006314_12 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004168 512.0
BYD3_k127_3006314_13 Protein of unknown function (DUF1552) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001102 516.0
BYD3_k127_3006314_14 Putative esterase K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000229 510.0
BYD3_k127_3006314_15 PFAM HipA domain protein K07154 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004775 513.0
BYD3_k127_3006314_16 Rieske [2Fe-2S] domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008109 514.0
BYD3_k127_3006314_17 PFAM monooxygenase FAD-binding K05712 - 1.14.13.127 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008342 517.0
BYD3_k127_3006314_18 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 493.0
BYD3_k127_3006314_19 TIGRFAM diguanylate cyclase (GGDEF) domain K21023 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001666 477.0
BYD3_k127_3006314_2 Belongs to the catalase family K03781 - 1.11.1.6 0.0 1131.0
BYD3_k127_3006314_20 Amidohydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002218 466.0
BYD3_k127_3006314_21 peptidase activity, acting on L-amino acid peptides K07004,K09955 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001348 460.0
BYD3_k127_3006314_22 PFAM Outer membrane efflux protein K18300 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005182 451.0
BYD3_k127_3006314_23 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002768 430.0
BYD3_k127_3006314_24 GHKL domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003537 404.0
BYD3_k127_3006314_25 N-formylglutamate amidohydrolase K01479 - 3.5.3.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003093 390.0
BYD3_k127_3006314_26 two-component system sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002447 400.0
BYD3_k127_3006314_27 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K18298 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000567 387.0
BYD3_k127_3006314_28 NAD(P)H-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009137 374.0
BYD3_k127_3006314_29 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009593 362.0
BYD3_k127_3006314_3 Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate K01712 - 4.2.1.49 4.659e-314 966.0
BYD3_k127_3006314_30 Protein of unknown function (DUF1428) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001887 355.0
BYD3_k127_3006314_31 GTP cyclohydrolase K01495 - 3.5.4.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 345.0
BYD3_k127_3006314_32 PAP2 superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001493 347.0
BYD3_k127_3006314_33 LysR substrate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001029 331.0
BYD3_k127_3006314_34 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005511 323.0
BYD3_k127_3006314_35 carboxylic ester hydrolase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004759 315.0
BYD3_k127_3006314_36 Protein of unknown function (DUF1264) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001325 314.0
BYD3_k127_3006314_37 Belongs to the SOS response-associated peptidase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005695 307.0
BYD3_k127_3006314_38 Protein of unknown function DUF72 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002156 298.0
BYD3_k127_3006314_39 Protein of unknown function (DUF3750) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000149 289.0
BYD3_k127_3006314_4 Protein of unknown function (DUF1587) - - - 2.301e-238 764.0
BYD3_k127_3006314_40 Trypsin-like serine protease K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001526 293.0
BYD3_k127_3006314_41 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines K01476,K01480 - 3.5.3.1,3.5.3.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002253 285.0
BYD3_k127_3006314_42 FAD-dependent pyridine nucleotide-disulphide oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002656 271.0
BYD3_k127_3006314_43 PFAM Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000003408 283.0
BYD3_k127_3006314_44 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003403 267.0
BYD3_k127_3006314_45 Hemolysin-type calcium-binding repeat (2 copies) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002498 271.0
BYD3_k127_3006314_46 cation diffusion facilitator family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001169 248.0
BYD3_k127_3006314_47 Sugar (and other) transporter K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002814 259.0
BYD3_k127_3006314_48 cheY-homologous receiver domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005254 255.0
BYD3_k127_3006314_49 Histidine kinase-like ATPases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003102 262.0
BYD3_k127_3006314_5 amino acid K16238 - - 5.092e-206 654.0
BYD3_k127_3006314_50 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000000000000000000000000000004237 241.0
BYD3_k127_3006314_51 Acetyltransferase (GNAT) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000004821 242.0
BYD3_k127_3006314_52 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000000000000000000000000000000000000000000000002769 225.0
BYD3_k127_3006314_53 Prokaryotic cytochrome b561 - - - 0.00000000000000000000000000000000000000000000000000000000000004007 220.0
BYD3_k127_3006314_54 phenylacetate-CoA ligase activity - - - 0.00000000000000000000000000000000000000000000000000000000000006069 220.0
BYD3_k127_3006314_55 SMART metal-dependent phosphohydrolase, HD region K01139 - 2.7.6.5,3.1.7.2 0.0000000000000000000000000000000000000000000000000000000000001027 217.0
BYD3_k127_3006314_56 MerR, DNA binding K13639 - - 0.00000000000000000000000000000000000000000000000000000000001045 212.0
BYD3_k127_3006314_57 Protein of unknown function (DUF2938) - - - 0.00000000000000000000000000000000000000000000000000000000001578 211.0
BYD3_k127_3006314_58 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.00000000000000000000000000000000000000000000000000000000005107 228.0
BYD3_k127_3006314_59 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000000000000000000000000000000000004072 208.0
BYD3_k127_3006314_6 amp-dependent synthetase and ligase K01897 - 6.2.1.3 1.807e-197 644.0
BYD3_k127_3006314_60 helix_turn_helix, Lux Regulon K02479 - - 0.000000000000000000000000000000000000000000000000000000001152 208.0
BYD3_k127_3006314_61 Domain of unknown function (DUF1993) K09983 - - 0.000000000000000000000000000000000000000000000000000000001612 225.0
BYD3_k127_3006314_62 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000001076 201.0
BYD3_k127_3006314_63 membrane - - - 0.000000000000000000000000000000000000000000000000000003021 197.0
BYD3_k127_3006314_64 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000009319 177.0
BYD3_k127_3006314_65 Peptidase C26 K01951 - 6.3.5.2 0.000000000000000000000000000000000000000000003877 168.0
BYD3_k127_3006314_66 cheY-homologous receiver domain - - - 0.0000000000000000000000000000000000000002259 154.0
BYD3_k127_3006314_67 Belongs to the sigma-70 factor family. ECF subfamily - - - 0.0000000000000000000000000000000000006069 144.0
BYD3_k127_3006314_68 Protein of Unknown function (DUF2784) - - - 0.000000000000000000000000000000000001575 141.0
BYD3_k127_3006314_69 Lecithin retinol acyltransferase - - - 0.00000000000000000000000000000000008925 139.0
BYD3_k127_3006314_7 Catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway K01468 - 3.5.2.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000391 603.0
BYD3_k127_3006314_70 - - - - 0.000000000000000000000000000000000247 138.0
BYD3_k127_3006314_71 transferase activity, transferring acyl groups K03824 - - 0.0000000000000000000000000000000003259 138.0
BYD3_k127_3006314_72 Alpha beta - - - 0.0000000000000000000000000000000006734 147.0
BYD3_k127_3006314_73 - - - - 0.0000000000000000000000000000000007734 137.0
BYD3_k127_3006314_74 - - - - 0.0000000000000000000000000000001423 129.0
BYD3_k127_3006314_75 Domain of unknown function (DUF4136) - - - 0.00000000000000000000000000005006 125.0
BYD3_k127_3006314_76 Protein conserved in bacteria K20274 - - 0.00000000000000000000000000007607 135.0
BYD3_k127_3006314_77 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000007078 123.0
BYD3_k127_3006314_78 bacterial OsmY and nodulation domain - - - 0.0000000000000000000000001369 120.0
BYD3_k127_3006314_79 Protein of unknown function (DUF2834) - - - 0.0000000000000000000000009662 106.0
BYD3_k127_3006314_8 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 549.0
BYD3_k127_3006314_80 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000001219 105.0
BYD3_k127_3006314_81 Galactose oxidase, central domain - - - 0.000000000000000000002197 111.0
BYD3_k127_3006314_82 WD40-like Beta Propeller Repeat K03641 - - 0.000000000000000000003437 106.0
BYD3_k127_3006314_83 Cytochrome C' - - - 0.00000000000000000006786 95.0
BYD3_k127_3006314_84 regulatory protein LuxR - - - 0.000000000000001933 85.0
BYD3_k127_3006314_85 Anti-sigma factor K07167 - - 0.000000000000979 77.0
BYD3_k127_3006314_86 Helix-turn-helix domain K15773 - - 0.0000000001082 65.0
BYD3_k127_3006314_87 - - - - 0.0000000002976 68.0
BYD3_k127_3006314_88 - - - - 0.0000000003181 69.0
BYD3_k127_3006314_89 - - - - 0.00000007287 60.0
BYD3_k127_3006314_9 Domain of Unknown Function (DUF748) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008252 566.0
BYD3_k127_3006314_90 Protein of unknown function (DUF2783) - - - 0.000001519 57.0
BYD3_k127_3032669_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 2447.0
BYD3_k127_3032669_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07788 - - 0.0 1495.0
BYD3_k127_3032669_10 - - - - 0.00000000000000000002906 93.0
BYD3_k127_3032669_2 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K07789 - - 0.0 1428.0
BYD3_k127_3032669_3 Major Facilitator - - - 1.078e-245 769.0
BYD3_k127_3032669_4 TonB dependent receptor K02014 - - 8.114e-230 763.0
BYD3_k127_3032669_5 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K07799 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001092 454.0
BYD3_k127_3032669_6 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001766 426.0
BYD3_k127_3032669_7 Belongs to the glycosyl hydrolase 5 (cellulase A) family K01179 - 3.2.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006611 411.0
BYD3_k127_3032669_8 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002744 403.0
BYD3_k127_3032669_9 transmembrane transporter activity K18138 - - 0.0000000000000000000000000000000001137 134.0
BYD3_k127_3074487_0 Histidine kinase - - - 0.0 1392.0
BYD3_k127_3074487_1 Efflux pump membrane transporter K18138 - - 0.0 1152.0
BYD3_k127_3074487_10 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002054 369.0
BYD3_k127_3074487_11 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 369.0
BYD3_k127_3074487_12 short chain amide porin - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 352.0
BYD3_k127_3074487_13 ABC transporter K01996 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002353 334.0
BYD3_k127_3074487_14 UreD urease accessory protein K03190 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004592 282.0
BYD3_k127_3074487_15 TraB family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002242 253.0
BYD3_k127_3074487_16 UreF - - - 0.000000000000000000000000000000000000000000000000000000000004023 218.0
BYD3_k127_3074487_17 Belongs to the urease gamma subunit family K01430 - 3.5.1.5 0.000000000000000000000000000000000000000000000000002691 182.0
BYD3_k127_3074487_18 Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly K03187 - - 0.0000000000000000000000000000000000000000000000000915 182.0
BYD3_k127_3074487_19 in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem to be active K01429 GO:0003674,GO:0003824,GO:0006807,GO:0008150,GO:0008152,GO:0009039,GO:0016787,GO:0016810,GO:0016811 3.5.1.5 0.0000000000000000000000000000000000000000001759 160.0
BYD3_k127_3074487_2 Urease alpha-subunit, N-terminal domain K01428 - 3.5.1.5 2.441e-309 979.0
BYD3_k127_3074487_20 Belongs to the low molecular weight phosphotyrosine protein phosphatase family K03741 - 1.20.4.1 0.00000000000000000000000000000000000000005179 173.0
BYD3_k127_3074487_21 YMGG-like Gly-zipper - - - 0.0000000000000000000000002381 113.0
BYD3_k127_3074487_22 Protein of unknown function (DUF3313) - - - 0.0000000000000000002767 99.0
BYD3_k127_3074487_23 Protein of unknown function (DUF3313) - - - 0.000000000000000003197 93.0
BYD3_k127_3074487_24 - - - - 0.000000000000005639 81.0
BYD3_k127_3074487_3 Periplasmic binding protein domain K11959 - - 2.21e-236 737.0
BYD3_k127_3074487_4 Branched-chain amino acid transport system / permease component K01997 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000556 587.0
BYD3_k127_3074487_5 Branched-chain amino acid transport system / permease component K01998 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 556.0
BYD3_k127_3074487_6 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008634 480.0
BYD3_k127_3074487_7 abc transporter atp-binding protein K11962 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005367 398.0
BYD3_k127_3074487_8 Alpha-L-arabinofuranosidase C-terminus K01209 - 3.2.1.55 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 374.0
BYD3_k127_3074487_9 CobW/HypB/UreG, nucleotide-binding domain K03189 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004197 355.0
BYD3_k127_3082147_0 Glycosyl hydrolase family 9 - - - 3.659e-202 641.0
BYD3_k127_3082147_1 Sodium/hydrogen exchanger family - - - 1.506e-195 619.0
BYD3_k127_3082147_2 Tryptophan halogenase K14266 - 1.14.19.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000141 607.0
BYD3_k127_3082147_3 Sodium/hydrogen exchanger family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009079 505.0
BYD3_k127_3082147_4 protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001015 355.0
BYD3_k127_3082147_5 Tryptophan halogenase K14266 - 1.14.19.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002694 295.0
BYD3_k127_3082147_6 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002576 286.0
BYD3_k127_3082147_7 Sulfite exporter TauE/SafE - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002519 259.0
BYD3_k127_3099818_0 glutamate synthase K00284 - 1.4.7.1 0.0 2303.0
BYD3_k127_3099818_1 Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site K03723 - - 0.0 1272.0
BYD3_k127_3099818_10 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001184 619.0
BYD3_k127_3099818_100 Gram-negative bacterial TonB protein C-terminal - - - 0.000024 55.0
BYD3_k127_3099818_101 Domain of unknown function (DUF4124) - - - 0.00002978 52.0
BYD3_k127_3099818_11 Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis K03688 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002509 548.0
BYD3_k127_3099818_12 Peptidase M16 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004388 535.0
BYD3_k127_3099818_13 magnesium chelatase K07391 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001654 503.0
BYD3_k127_3099818_14 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain K00175 - 1.2.7.11,1.2.7.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009641 492.0
BYD3_k127_3099818_15 The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine K01696 - 4.2.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000215 483.0
BYD3_k127_3099818_16 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000148 464.0
BYD3_k127_3099818_17 Insulinase (Peptidase family M16) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005111 440.0
BYD3_k127_3099818_18 Major facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 437.0
BYD3_k127_3099818_19 COG1131 ABC-type multidrug transport system, ATPase component K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000114 414.0
BYD3_k127_3099818_2 In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity K02335 - 2.7.7.7 0.0 1173.0
BYD3_k127_3099818_20 Lipoprotein releasing system transmembrane protein K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 407.0
BYD3_k127_3099818_21 Arginosuccinate synthase K01940 - 6.3.4.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001361 402.0
BYD3_k127_3099818_22 PFAM Glycosyl transferase, group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003872 392.0
BYD3_k127_3099818_23 Belongs to the 'phage' integrase family. XerC subfamily K03733 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002321 370.0
BYD3_k127_3099818_24 COG0604 NADPH quinone reductase and related Zn-dependent oxidoreductases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001991 369.0
BYD3_k127_3099818_25 Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2- polyprenyl-3-methyl-6-methoxy-1,4-benzoquinol (DMQH2) K03183 GO:0003674,GO:0003824,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0008168,GO:0008169,GO:0008425,GO:0008757,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016740,GO:0016741,GO:0030580,GO:0032259,GO:0042180,GO:0042181,GO:0043333,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663 2.1.1.163,2.1.1.201 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001861 352.0
BYD3_k127_3099818_26 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 347.0
BYD3_k127_3099818_27 TamB, inner membrane protein subunit of TAM complex K09800 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 380.0
BYD3_k127_3099818_28 argininosuccinate lyase K01755 GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 320.0
BYD3_k127_3099818_29 lipoprotein releasing system, transmembrane protein, LolC E family K09808 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005691 320.0
BYD3_k127_3099818_3 - - - - 2.008e-291 944.0
BYD3_k127_3099818_30 Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan K01778 - 5.1.1.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002953 310.0
BYD3_k127_3099818_31 Transport permease protein K01992 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002733 313.0
BYD3_k127_3099818_32 Glucose / Sorbosone dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001394 316.0
BYD3_k127_3099818_33 POTRA domain TamA domain 1 K07277,K07278 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001793 313.0
BYD3_k127_3099818_34 Mediates influx of magnesium ions K03284 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001943 299.0
BYD3_k127_3099818_35 hydrolase of the alpha beta-hydrolase fold K07019 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002208 300.0
BYD3_k127_3099818_36 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001049 310.0
BYD3_k127_3099818_37 Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002119 293.0
BYD3_k127_3099818_38 MFS transporter K07552 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004723 303.0
BYD3_k127_3099818_39 Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions K01507 - 3.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002645 291.0
BYD3_k127_3099818_4 COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases K15022 - 1.17.1.10 2.922e-290 914.0
BYD3_k127_3099818_40 Protein of unknown function (DUF2167) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002295 280.0
BYD3_k127_3099818_41 Histidine kinase K08082 - 2.7.13.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002368 295.0
BYD3_k127_3099818_42 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005758 278.0
BYD3_k127_3099818_43 Belongs to the acetylglutamate kinase family. ArgB subfamily K00930 GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000009903 272.0
BYD3_k127_3099818_44 Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA) K00766,K13497 - 2.4.2.18,4.1.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000004468 273.0
BYD3_k127_3099818_45 Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery K01419 - 3.4.25.2 0.000000000000000000000000000000000000000000000000000000000000000000000000004514 260.0
BYD3_k127_3099818_46 TIGRFAM glutamine amidotransferase of anthranilate synthase K01658,K01664 - 2.6.1.85,4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000004169 253.0
BYD3_k127_3099818_47 PFAM Aminotransferase class-III K00821 - 2.6.1.11,2.6.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000004062 267.0
BYD3_k127_3099818_48 2OG-Fe(II) oxygenase superfamily K03919 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009987,GO:0016070,GO:0016491,GO:0016705,GO:0016706,GO:0032451,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035515,GO:0035552,GO:0035553,GO:0042245,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043734,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0044728,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051213,GO:0051716,GO:0055114,GO:0070579,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0140098,GO:1901360 1.14.11.33 0.00000000000000000000000000000000000000000000000000000000000000000001066 256.0
BYD3_k127_3099818_49 Belongs to the ATCase OTCase family K09065,K13043 GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 0.00000000000000000000000000000000000000000000000000000000000000000001903 244.0
BYD3_k127_3099818_5 TIGRFAM glutamate synthase, NADH NADPH, small subunit K00266 - 1.4.1.13,1.4.1.14 1.575e-262 814.0
BYD3_k127_3099818_50 NADH pyrophosphatase zinc ribbon domain K03426 - 3.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000007541 242.0
BYD3_k127_3099818_51 Response regulator of the LytR AlgR family K08083 - - 0.0000000000000000000000000000000000000000000000000000000000000000001674 238.0
BYD3_k127_3099818_52 alpha beta K06889 - - 0.000000000000000000000000000000000000000000000000000000000000000001166 244.0
BYD3_k127_3099818_53 Transport and Golgi organisation 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000939 231.0
BYD3_k127_3099818_54 Protein of unknown function (DUF938) - - - 0.00000000000000000000000000000000000000000000000000000000000002455 220.0
BYD3_k127_3099818_55 Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner K09810 - - 0.00000000000000000000000000000000000000000000000000000000000003964 218.0
BYD3_k127_3099818_56 methyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000006533 229.0
BYD3_k127_3099818_57 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000000006498 231.0
BYD3_k127_3099818_58 Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde K00145,K05829 - 1.2.1.38 0.00000000000000000000000000000000000000000000000000000000877 211.0
BYD3_k127_3099818_59 The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate K01695 - 4.2.1.20 0.00000000000000000000000000000000000000000000000000003348 197.0
BYD3_k127_3099818_6 pyruvate flavodoxin ferredoxin oxidoreductase K00174 - 1.2.7.11,1.2.7.3 5.412e-251 803.0
BYD3_k127_3099818_60 - - - - 0.00000000000000000000000000000000000000000000000000009393 194.0
BYD3_k127_3099818_61 Alpha/beta hydrolase family K06889 - - 0.00000000000000000000000000000000000000000000000000135 193.0
BYD3_k127_3099818_62 COG2863 Cytochrome c553 - - - 0.000000000000000000000000000000000000000000000000002378 193.0
BYD3_k127_3099818_63 Peptidase C13 family - - - 0.000000000000000000000000000000000000000000000008424 184.0
BYD3_k127_3099818_64 Peptidase C13 family - - - 0.0000000000000000000000000000000000000000000002169 186.0
BYD3_k127_3099818_65 Necessary for normal cell division and for the maintenance of normal septation K03978 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.0000000000000000000000000000000000000000000002388 175.0
BYD3_k127_3099818_66 Bacterial protein of unknown function (DUF924) - - - 0.000000000000000000000000000000000000000000002326 172.0
BYD3_k127_3099818_67 Protein of unknown function (DUF1318) - - - 0.00000000000000000000000000000000000000000003443 181.0
BYD3_k127_3099818_68 Arylesterase - - - 0.00000000000000000000000000000000000000000008655 174.0
BYD3_k127_3099818_7 Prolyl oligopeptidase family - - - 2.152e-250 792.0
BYD3_k127_3099818_70 Acyltransferase family - - - 0.000000000000000000000000000000000000000001703 169.0
BYD3_k127_3099818_71 Protein of unknown function (DUF971) - - - 0.000000000000000000000000000000000000000006413 158.0
BYD3_k127_3099818_72 Thioesterase superfamily K19222 GO:0003674,GO:0003824,GO:0006732,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009233,GO:0009234,GO:0009987,GO:0016289,GO:0016787,GO:0016788,GO:0016790,GO:0042180,GO:0042181,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0051186,GO:0051188,GO:0061522,GO:0071704,GO:1901576,GO:1901661,GO:1901663 3.1.2.28 0.0000000000000000000000000000000000000006701 171.0
BYD3_k127_3099818_73 at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA) K04752 - - 0.00000000000000000000000000000000000001049 150.0
BYD3_k127_3099818_74 Anthranilate synthase component I, N terminal region K01657 - 4.1.3.27 0.00000000000000000000000000000000000001726 145.0
BYD3_k127_3099818_75 Family of unknown function (DUF695) - - - 0.00000000000000000000000000000000000001899 166.0
BYD3_k127_3099818_76 PFAM phosphoesterase PA-phosphatase related K19302 - 3.6.1.27 0.0000000000000000000000000000000000001745 158.0
BYD3_k127_3099818_77 Bleomycin resistance protein K01759 - 4.4.1.5 0.0000000000000000000000000000000000002439 151.0
BYD3_k127_3099818_78 Protein of unknown function, DUF484 K09921 - - 0.000000000000000000000000000000000003544 146.0
BYD3_k127_3099818_79 coa-binding K06929 - - 0.000000000000000000000000000000000007174 140.0
BYD3_k127_3099818_8 this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis K03667 - - 3.044e-196 620.0
BYD3_k127_3099818_80 YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the K09780 - - 0.0000000000000000000000000000000002059 135.0
BYD3_k127_3099818_81 Thiol disulfide interchange protein K03673 GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000003774 139.0
BYD3_k127_3099818_82 Indole-3-glycerol phosphate synthase K01609 GO:0000162,GO:0000287,GO:0003674,GO:0003824,GO:0004425,GO:0005488,GO:0005575,GO:0005618,GO:0005623,GO:0005886,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016020,GO:0016053,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019752,GO:0030312,GO:0034641,GO:0040007,GO:0042401,GO:0042430,GO:0042435,GO:0043167,GO:0043169,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044464,GO:0046219,GO:0046391,GO:0046394,GO:0046483,GO:0046872,GO:0071704,GO:0071944,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.1.1.48 0.000000000000000000000000000000001937 148.0
BYD3_k127_3099818_83 - - - - 0.000000000000000000000000000000007066 135.0
BYD3_k127_3099818_84 Acetyltransferase (GNAT) domain K22441 - 2.3.1.57 0.00000000000000000000000000000002015 145.0
BYD3_k127_3099818_85 cheY-homologous receiver domain - - - 0.00000000000000000000000000000009195 139.0
BYD3_k127_3099818_86 Cytochrome C oxidase, cbb3-type, subunit III - - - 0.000000000000000000000000001462 118.0
BYD3_k127_3099818_87 belongs to the TrpF family K01817 - 5.3.1.24 0.0000000000000000000000001631 117.0
BYD3_k127_3099818_88 Outer membrane protein beta-barrel domain - - - 0.00000000000000000000001947 106.0
BYD3_k127_3099818_89 Catalyzes the formation of 3,6-dideoxy-D-glycero-D-glycero-4-hexulose K00523 - 1.17.1.1 0.0000000000000000002073 101.0
BYD3_k127_3099818_9 Ammonium Transporter K03320 - - 3.816e-194 621.0
BYD3_k127_3099818_90 PFAM helix-turn-helix- domain containing protein, AraC type - - - 0.00000000000000001625 93.0
BYD3_k127_3099818_91 arginine binding K03402 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0006355,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032991,GO:0032993,GO:0043565,GO:0044212,GO:0045893,GO:0045935,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051252,GO:0051254,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0140110,GO:1901363,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000112,GO:2001141 - 0.0000000000000000761 86.0
BYD3_k127_3099818_92 - - - - 0.00000000000001522 76.0
BYD3_k127_3099818_93 protein conserved in bacteria K09806 - - 0.000000000000072 78.0
BYD3_k127_3099818_94 Polymer-forming cytoskeletal - - - 0.0000000000005191 76.0
BYD3_k127_3099818_95 Peptidoglycan-binding protein, CsiV - - - 0.000000000001841 77.0
BYD3_k127_3099818_96 protein conserved in bacteria K03690 - - 0.000000000001939 78.0
BYD3_k127_3099818_98 Sporulation related domain - - - 0.0000003558 60.0
BYD3_k127_3099818_99 COG0457 FOG TPR repeat - - - 0.0000003947 63.0
BYD3_k127_3238996_0 PFAM AMP-dependent synthetase and ligase K01897 - 6.2.1.3 1.409e-213 676.0
BYD3_k127_3238996_1 FtsX-like permease family K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001832 625.0
BYD3_k127_3238996_2 Calcineurin-like phosphoesterase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004579 515.0
BYD3_k127_3238996_3 ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001886 289.0
BYD3_k127_3238996_4 PFAM lipolytic protein G-D-S-L family K10804 - 3.1.1.5 0.000000000000000000000000000000000000000000000000000000000000006352 229.0
BYD3_k127_3336936_0 lysine biosynthetic process via aminoadipic acid - - - 5.276e-284 887.0
BYD3_k127_3336936_1 Allophanate hydrolase K01457 - 3.5.1.54 8.489e-222 711.0
BYD3_k127_3336936_2 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 0.0000000000000000000000000000000000000000000000007828 180.0
BYD3_k127_338502_0 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain - - - 3.462e-237 748.0
BYD3_k127_338502_1 Major facilitator superfamily K08191 - - 6.3e-200 632.0
BYD3_k127_338502_2 Catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge K00574 - 2.1.1.79 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002463 476.0
BYD3_k127_338502_3 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase K00020 - 1.1.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007031 337.0
BYD3_k127_338502_4 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814 - 2.4.1.129 0.00000000000000000000000000000000000000000000000009585 188.0
BYD3_k127_3390258_0 ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP K03544 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004742 574.0
BYD3_k127_3390258_1 Glycosyl Hydrolase Family 88 K15532 - 3.2.1.172 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001149 572.0
BYD3_k127_3390258_10 - - - - 0.0000001623 53.0
BYD3_k127_3390258_2 MFS/sugar transport protein K03292,K16210 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004076 527.0
BYD3_k127_3390258_3 Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase K03545 GO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006464,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0036211,GO:0042802,GO:0043021,GO:0043022,GO:0043170,GO:0043335,GO:0043412,GO:0044183,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0050896,GO:0051083,GO:0061077,GO:0071704,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001788 355.0
BYD3_k127_3390258_4 Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins K01358 - 3.4.21.92 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001469 326.0
BYD3_k127_3390258_5 Involved in the anomeric conversion of L-rhamnose K03534 - 5.1.3.32 0.00000000000000000000000000000000000000007246 153.0
BYD3_k127_3390258_6 - - - - 0.000000000000000001922 89.0
BYD3_k127_3390258_7 methyltransferase activity - - - 0.0000000000000009889 90.0
BYD3_k127_3390258_8 Belongs to the UPF0434 family K09791 - - 0.00000000000001291 75.0
BYD3_k127_3390258_9 - - - - 0.000000000001884 74.0
BYD3_k127_3392718_0 response regulator receiver K02487,K06596 - - 0.0 1082.0
BYD3_k127_3392718_1 Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor K00833 - 2.6.1.62 1.552e-213 670.0
BYD3_k127_3392718_10 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000002355 256.0
BYD3_k127_3392718_11 PFAM N-acetylmuramoyl-L-alanine amidase family 2 K03806 - 3.5.1.28 0.000000000000000000000000000000000000000000000000000000000000008924 233.0
BYD3_k127_3392718_12 Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit K09761 - 2.1.1.193 0.00000000000000000000000000000000000000000000000000000000000003515 236.0
BYD3_k127_3392718_13 COG1120 ABC-type cobalamin Fe3 -siderophores transport systems, ATPase components K02013 - 3.6.3.34 0.00000000000000000000000000000000000000000000001023 184.0
BYD3_k127_3392718_14 Catalyzes the oxidation of either pyridoxine 5'- phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP) K00275 - 1.4.3.5 0.000000000000000000000000000000000000000000001719 173.0
BYD3_k127_3392718_15 - - - - 0.00000000000000000000000000000000000001088 147.0
BYD3_k127_3392718_16 Protein of unknown function (DUF3037) - - - 0.000000000000000000000000000000000002412 144.0
BYD3_k127_3392718_17 chemotaxis signal transduction protein K06598 - - 0.00000000000000000004888 95.0
BYD3_k127_3392718_2 Prephenate dehydrogenase chorismate mutase K00210 - 1.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002372 426.0
BYD3_k127_3392718_3 TonB-dependent Receptor Plug K16092 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003196 383.0
BYD3_k127_3392718_4 Serine threonine protein kinase involved in cell cycle control - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002349 368.0
BYD3_k127_3392718_5 chemotaxis protein K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001778 338.0
BYD3_k127_3392718_6 Inositol monophosphatase K05602 - 3.1.3.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002783 299.0
BYD3_k127_3392718_7 Protein of unknown function, DUF484 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000004011 276.0
BYD3_k127_3392718_8 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000003583 250.0
BYD3_k127_3392718_9 adenosyltransferase K00798 - 2.5.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000001167 249.0
BYD3_k127_344976_0 RHS Repeat - - - 0.0 1177.0
BYD3_k127_344976_1 COG1472 Beta-glucosidase-related glycosidases K05349 - 3.2.1.21 2.761e-308 966.0
BYD3_k127_344976_10 Mannose-6-phosphate isomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006945 382.0
BYD3_k127_344976_11 Serine hydrolase involved in the detoxification of formaldehyde K01070,K09795 - 3.1.2.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 360.0
BYD3_k127_344976_12 Amino acid permease K03294,K03759 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002209 357.0
BYD3_k127_344976_13 PFAM ROK family protein K00847 - 2.7.1.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 348.0
BYD3_k127_344976_14 Transcriptional regulator K02529 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005067 339.0
BYD3_k127_344976_15 Glutathione-dependent formaldehyde-activating enzyme K03396 - 4.4.1.22 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001515 278.0
BYD3_k127_344976_16 Belongs to the bacterial glucokinase family K00845 GO:0003674,GO:0003824,GO:0004340,GO:0004396,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0051156,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576 2.7.1.2 0.0000000000000000000000000000000000000000000000000000000000005142 224.0
BYD3_k127_344976_17 GDSL-like Lipase/Acylhydrolase - - - 0.00000000000000000000000000000000000000000000000000000000004549 213.0
BYD3_k127_344976_18 Outer membrane protein W K07275 - - 0.000000000000000000000000000000000000000000000000063 185.0
BYD3_k127_344976_19 RHS Repeat - - - 0.00000000000000000000000000000000000000001901 180.0
BYD3_k127_344976_2 formate-tetrahydrofolate ligase activity K01938 - 6.3.4.3 1.896e-280 874.0
BYD3_k127_344976_20 TIGRFAM phage conjugal plasmid C-4 type zinc finger protein, TraR family - - - 0.0000000000000000000000000000000003237 132.0
BYD3_k127_344976_21 Tetratricopeptide repeats - - - 0.00000000000000000000000000000001345 141.0
BYD3_k127_344976_22 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K01420 - - 0.000000000000000005012 92.0
BYD3_k127_344976_23 COG2931 RTX toxins and related Ca2 -binding proteins - - - 0.00000000002515 80.0
BYD3_k127_344976_3 RHS Repeat - - - 4.415e-244 848.0
BYD3_k127_344976_4 Belongs to the IlvD Edd family K01690 - 4.2.1.12 1.633e-233 760.0
BYD3_k127_344976_5 Zinc-binding dehydrogenase K00121 - 1.1.1.1,1.1.1.284 7.737e-207 657.0
BYD3_k127_344976_6 Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone K00036 - 1.1.1.363,1.1.1.49 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004384 550.0
BYD3_k127_344976_7 COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit K00499,K16319 - 1.14.12.1,1.14.15.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001635 526.0
BYD3_k127_344976_8 Tryptophan halogenase K14266 - 1.14.19.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 427.0
BYD3_k127_344976_9 PFAM major facilitator superfamily MFS_1 K02429 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004164 423.0
BYD3_k127_3533815_0 Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone K03168 - 5.99.1.2 2.08e-322 1006.0
BYD3_k127_3533815_1 Arginyl-tRNA synthetase K01887 GO:0003674,GO:0003824,GO:0004812,GO:0004814,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006420,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.19 1.368e-209 666.0
BYD3_k127_3533815_10 Gram-negative-bacterium-type cell outer membrane assembly K06880,K21572 - - 0.00000000000000000000000000000000000000000000002033 182.0
BYD3_k127_3533815_11 Specifically methylates the adenine in position 2030 of 23S rRNA K07115 - 2.1.1.266 0.000000000000000000000000000000000000000000004862 179.0
BYD3_k127_3533815_12 Belongs to the Smg family K03747 - - 0.00000000000000000000000000000000000000195 153.0
BYD3_k127_3533815_13 Sporulation related domain - - - 0.000000000000000000000000000000042 132.0
BYD3_k127_3533815_14 Protein of unknown function (DUF1203) - - - 0.0000000000000000000001255 103.0
BYD3_k127_3533815_15 EF-hand domain pair - - - 0.00000000000000001636 88.0
BYD3_k127_3533815_16 - - - - 0.0000000000000001486 92.0
BYD3_k127_3533815_17 Domain of unknown function (DUF4390) - - - 0.000000005269 64.0
BYD3_k127_3533815_2 signal transduction histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007079 557.0
BYD3_k127_3533815_3 response regulator receiver K13599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001088 458.0
BYD3_k127_3533815_4 Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus K00604 GO:0003674,GO:0003824,GO:0004479,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006418,GO:0006431,GO:0006464,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019752,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001794 345.0
BYD3_k127_3533815_5 TIGRFAM DNA protecting protein DprA K04096 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009473 325.0
BYD3_k127_3533815_6 Bacterial capsule synthesis protein PGA_cap K07282 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000005356 302.0
BYD3_k127_3533815_7 Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA K03500 - 2.1.1.176 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003436 302.0
BYD3_k127_3533815_8 peptidoglycan-binding protein, lysm - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000002787 274.0
BYD3_k127_3533815_9 Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions K01462 GO:0003674,GO:0003824,GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016810,GO:0016811,GO:0018193,GO:0018206,GO:0019538,GO:0031365,GO:0036211,GO:0042586,GO:0043170,GO:0043412,GO:0043686,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901564 3.5.1.88 0.00000000000000000000000000000000000000000000000000000000000000003159 228.0
BYD3_k127_3606265_0 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.0 1555.0
BYD3_k127_3606265_1 receptor - - - 1.2e-322 1023.0
BYD3_k127_3606265_10 Short-chain dehydrogenase reductase SDR K00059,K03793 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008667,GO:0009058,GO:0009237,GO:0009238,GO:0009239,GO:0009712,GO:0009713,GO:0009987,GO:0016043,GO:0016491,GO:0016627,GO:0016628,GO:0018130,GO:0018958,GO:0019184,GO:0019290,GO:0019438,GO:0019540,GO:0019748,GO:0022607,GO:0034641,GO:0042802,GO:0043043,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0046189,GO:0046483,GO:0051186,GO:0051188,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0055114,GO:0065003,GO:0071704,GO:0071840,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 1.1.1.100,1.5.1.33 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004686 308.0
BYD3_k127_3606265_11 Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin K06153 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 304.0
BYD3_k127_3606265_12 Histidine kinase internal region - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000008047 284.0
BYD3_k127_3606265_13 Putative aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001031 275.0
BYD3_k127_3606265_14 phosphorelay signal transduction system K02477 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002207 267.0
BYD3_k127_3606265_15 Protein of unknown function (DUF3500) - - - 0.00000000000000000000000000000000000000000000000000000000002157 220.0
BYD3_k127_3606265_16 Yqey-like protein K09117 - - 0.00000000000000000000000000000000000000000000000002789 182.0
BYD3_k127_3606265_17 Integral membrane protein CcmA involved in cell shape determination - - - 0.000000000000000000000000000000000000000003296 165.0
BYD3_k127_3606265_18 Belongs to the small heat shock protein (HSP20) family K13993 - - 0.00000000000000000000000000000000000001084 149.0
BYD3_k127_3606265_19 Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin K01633 - 1.13.11.81,4.1.2.25,5.1.99.8 0.0000000000000000000000000000000000001041 145.0
BYD3_k127_3606265_2 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 GO:0000988,GO:0000990,GO:0003674,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0016987,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043254,GO:0044087,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050789,GO:0050794,GO:0050896,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901576,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 1.972e-217 698.0
BYD3_k127_3606265_20 Belongs to the multicopper oxidase YfiH RL5 family K05810 GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - 0.000000000000000000000000000000000001021 148.0
BYD3_k127_3606265_21 - - - - 0.0000000000000000000000000000000001486 142.0
BYD3_k127_3606265_22 Reverse transcriptase-like K02226,K22316 GO:0003674,GO:0003676,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005488,GO:0006139,GO:0006401,GO:0006725,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009110,GO:0009235,GO:0009236,GO:0009987,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016891,GO:0016893,GO:0017144,GO:0018130,GO:0019438,GO:0019439,GO:0032296,GO:0033013,GO:0033014,GO:0034641,GO:0034655,GO:0042364,GO:0042578,GO:0043170,GO:0043755,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0046700,GO:0051186,GO:0051188,GO:0071667,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576 3.1.26.4,3.1.3.73 0.000000000000000000000000000000002233 138.0
BYD3_k127_3606265_23 - - - - 0.00000000000000000000000000000000475 132.0
BYD3_k127_3606265_24 C4-type zinc ribbon domain K07164 - - 0.00000000000000000000000000000003218 134.0
BYD3_k127_3606265_25 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase K00950 - 2.7.6.3 0.000000000000000000000000000006718 126.0
BYD3_k127_3606265_26 - - - - 0.000000000000000000000000001104 117.0
BYD3_k127_3606265_27 Belongs to the bacterial ribosomal protein bS21 family K02970 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:1990904 - 0.0000000000000000000003442 98.0
BYD3_k127_3606265_28 - - - - 0.0000000000000001821 94.0
BYD3_k127_3606265_29 sequence-specific DNA binding - - - 0.0000000000001247 76.0
BYD3_k127_3606265_3 Belongs to the glycosyl hydrolase 5 (cellulase A) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 518.0
BYD3_k127_3606265_30 HupE / UreJ protein - - - 0.000001406 60.0
BYD3_k127_3606265_4 Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'- nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases K00974 - 2.7.7.72 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003086 514.0
BYD3_k127_3606265_5 RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication K02316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000238 522.0
BYD3_k127_3606265_6 COG0644 Dehydrogenases (flavoproteins) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002088 507.0
BYD3_k127_3606265_7 Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction K01409 GO:0000287,GO:0000408,GO:0002949,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005488,GO:0005506,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006508,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008233,GO:0008237,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0019538,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0070011,GO:0070525,GO:0071704,GO:0090304,GO:0140030,GO:0140032,GO:0140096,GO:1901360,GO:1901564 2.3.1.234 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 433.0
BYD3_k127_3606265_8 Belongs to the peptidase S1C family K04771,K04772 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004741 419.0
BYD3_k127_3606265_9 Putative S-adenosyl-L-methionine-dependent methyltransferase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002986 366.0
BYD3_k127_3634601_0 Major facilitator superfamily K08151 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003708 412.0
BYD3_k127_3634601_1 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K01406 - 3.4.24.40 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 403.0
BYD3_k127_3634601_2 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000006023 151.0
BYD3_k127_3634601_3 protein conserved in bacteria - - - 0.000000000000000000000000000000000005357 146.0
BYD3_k127_3664141_0 Belongs to the Orn Lys Arg decarboxylase class-II family K00928,K12526 - 2.7.2.4,4.1.1.20 8.321e-270 856.0
BYD3_k127_3664141_1 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004445 608.0
BYD3_k127_3664141_10 ATP phosphoribosyltransferase K00765 GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003319 332.0
BYD3_k127_3664141_11 Adenylate and Guanylate cyclase catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006778 308.0
BYD3_k127_3664141_12 Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily K00817 - 2.6.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 304.0
BYD3_k127_3664141_13 PFAM ErfK YbiS YcfS YnhG family protein K16291 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008409 297.0
BYD3_k127_3664141_14 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001086 304.0
BYD3_k127_3664141_15 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000007303 262.0
BYD3_k127_3664141_16 Belongs to the AB hydrolase superfamily. MetX family K00641 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004414,GO:0006082,GO:0006520,GO:0006555,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008374,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009069,GO:0009086,GO:0009092,GO:0009987,GO:0016053,GO:0016407,GO:0016413,GO:0016740,GO:0016746,GO:0016747,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.3.1.31 0.00000000000000000000000000000000000000000000000000000000000000000000000002284 265.0
BYD3_k127_3664141_17 methyltransferase activity K21310 - 2.1.1.334 0.00000000000000000000000000000000000000000000000000000000000000000000000003231 258.0
BYD3_k127_3664141_18 Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis K00759 - 2.4.2.7 0.000000000000000000000000000000000000000000000000000000000000000000000000253 254.0
BYD3_k127_3664141_19 Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP K01496,K11755 - 3.5.4.19,3.6.1.31 0.00000000000000000000000000000000000000000000000000000000000000000005435 240.0
BYD3_k127_3664141_2 Methionine synthase K00549 - 2.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002167 584.0
BYD3_k127_3664141_20 hydrolase activity, acting on ester bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000001732 234.0
BYD3_k127_3664141_21 Xylose isomerase-like TIM barrel - - - 0.000000000000000000000000000000000000000000000000000000000000002258 236.0
BYD3_k127_3664141_22 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR K02501 - - 0.000000000000000000000000000000000000000000000000000000000000007301 223.0
BYD3_k127_3664141_23 - - - - 0.00000000000000000000000000000000000000000000000000000000000135 215.0
BYD3_k127_3664141_24 Histidine biosynthesis protein K01814 - 5.3.1.16 0.0000000000000000000000000000000000000000000000000000000003227 211.0
BYD3_k127_3664141_25 S-adenosyl-l-methionine hydroxide adenosyltransferase K22205 - - 0.000000000000000000000000000000000000000000001522 177.0
BYD3_k127_3664141_26 protein conserved in bacteria - - - 0.00000000000000000000000000000000001072 142.0
BYD3_k127_3664141_27 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000001301 119.0
BYD3_k127_3664141_28 protein, YerC YecD - - - 0.00000000000000000000000001581 111.0
BYD3_k127_3664141_29 Type IV pilus biogenesis stability protein PilW - - - 0.0000000000000000006432 100.0
BYD3_k127_3664141_3 cystathionine K01739 - 2.5.1.48 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005501 506.0
BYD3_k127_3664141_30 - - - - 0.000000000000000001987 95.0
BYD3_k127_3664141_31 Amidase K01426,K02433 - 3.5.1.4,6.3.5.6,6.3.5.7 0.0000000000008787 72.0
BYD3_k127_3664141_32 Phosphoribosyl-AMP cyclohydrolase K11755 - 3.5.4.19,3.6.1.31 0.0000000000009653 72.0
BYD3_k127_3664141_33 lactoylglutathione lyase activity - - - 0.00000000002147 73.0
BYD3_k127_3664141_34 belongs to the PRA-CH family K01496,K11755 - 3.5.4.19,3.6.1.31 0.00009733 46.0
BYD3_k127_3664141_4 PFAM amidohydrolase 2 K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003631 461.0
BYD3_k127_3664141_5 Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine K00013 GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001367 463.0
BYD3_k127_3664141_6 imidazoleglycerol-phosphate dehydratase K01089,K01693 - 3.1.3.15,4.2.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002688 428.0
BYD3_k127_3664141_7 Sugar (and other) transporter K08195 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000309 418.0
BYD3_k127_3664141_8 Glutathione S-transferase, C-terminal domain K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001973 356.0
BYD3_k127_3664141_9 IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit K02500 GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007484 366.0
BYD3_k127_3665204_0 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003293 523.0
BYD3_k127_3665204_1 Reversible hydration of carbon dioxide K01673 - 4.2.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003033 307.0
BYD3_k127_3665204_2 Stringent starvation protein A K03599 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001671 261.0
BYD3_k127_3665204_3 lipoprotein K07121 GO:0000270,GO:0003674,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000000000000000000000000000000000000000004026 247.0
BYD3_k127_3665204_4 cytochrome K00413 - - 0.00000000000000000000000000000000000000000000000000000000000000001458 232.0
BYD3_k127_3665204_5 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000002326 139.0
BYD3_k127_3665204_6 Stringent starvation protein B K03600 - - 0.00000000000000000000000000000000005444 142.0
BYD3_k127_3665204_7 PFAM CBS domain K04767 - - 0.0000000000000000000000000002416 123.0
BYD3_k127_3665204_8 Belongs to the UPF0102 family K07460 - - 0.000000000000000000002493 99.0
BYD3_k127_3674907_0 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate K03701 - - 0.0 1273.0
BYD3_k127_3674907_1 Histidine kinase K03407 - 2.7.13.3 7.352e-316 998.0
BYD3_k127_3674907_10 Biotin-protein ligase, N terminal - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000005084 273.0
BYD3_k127_3674907_11 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000044 275.0
BYD3_k127_3674907_12 CheB methylesterase K03412 - 3.1.1.61,3.5.1.44 0.0000000000000000000000000000000000000000000000000006387 190.0
BYD3_k127_3674907_13 One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit K02986 GO:0000028,GO:0000900,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006355,GO:0006412,GO:0006417,GO:0006446,GO:0006450,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015935,GO:0016043,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030371,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031554,GO:0031564,GO:0032268,GO:0032269,GO:0032270,GO:0032991,GO:0034248,GO:0034249,GO:0034250,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043244,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045182,GO:0045727,GO:0045903,GO:0045947,GO:0048027,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0060255,GO:0065003,GO:0065007,GO:0065008,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0090079,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903506,GO:1990145,GO:1990904,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000236 172.0
BYD3_k127_3674907_14 Ribosomal protein L17 K02879 GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000008851 166.0
BYD3_k127_3674907_15 Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell K03282 - - 0.000000000000000000000000000000000000006555 157.0
BYD3_k127_3674907_16 -acetyltransferase - - - 0.0000000000000000000006281 102.0
BYD3_k127_3674907_2 Gamma-glutamyltranspeptidase K00681 - 2.3.2.2,3.4.19.13 5.922e-218 690.0
BYD3_k127_3674907_3 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003284 516.0
BYD3_k127_3674907_4 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates K03040 - 2.7.7.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000102 482.0
BYD3_k127_3674907_5 Beta-galactosidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006627 438.0
BYD3_k127_3674907_6 Splits dipeptides with a prolyl residue in the C- terminal position K01271 - 3.4.13.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 424.0
BYD3_k127_3674907_7 Isoprenylcysteine carboxyl methyltransferase (ICMT) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006164 391.0
BYD3_k127_3674907_8 PFAM MCP methyltransferase CheR-type K00575 - 2.1.1.80 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004361 372.0
BYD3_k127_3674907_9 WD40 domain protein beta Propeller - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005025 361.0
BYD3_k127_3726065_0 Hpt domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009938 323.0
BYD3_k127_3726065_1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain K04691,K04772 GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006508,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0009897,GO:0009986,GO:0009987,GO:0010033,GO:0016020,GO:0016021,GO:0016787,GO:0017171,GO:0019538,GO:0030288,GO:0030313,GO:0031224,GO:0031226,GO:0031233,GO:0031975,GO:0033554,GO:0035966,GO:0035967,GO:0042221,GO:0042597,GO:0042802,GO:0043170,GO:0044238,GO:0044425,GO:0044459,GO:0044464,GO:0050896,GO:0051716,GO:0051788,GO:0070011,GO:0070887,GO:0071218,GO:0071310,GO:0071575,GO:0071704,GO:0071944,GO:0098552,GO:0140096,GO:1901564 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000964 292.0
BYD3_k127_3726065_2 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00411 - 1.10.2.2 0.000000000000000000000000000000000000000000000000000000000000001095 236.0
BYD3_k127_3726065_3 Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis K00412 - - 0.0000000000000000000000000000000000000000000000000000000007739 204.0
BYD3_k127_3726065_4 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000005845 149.0
BYD3_k127_3726065_5 Chemotaxis phosphatase CheX K03409 - - 0.000000000000000000000000000000004478 132.0
BYD3_k127_3726065_6 Gram-negative bacterial TonB protein C-terminal K03832 - - 0.000001916 61.0
BYD3_k127_3726065_7 Protein tyrosine kinase K08282 - 2.7.11.1 0.00001756 58.0
BYD3_k127_3750454_0 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006389 582.0
BYD3_k127_3750454_1 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008046 579.0
BYD3_k127_3750454_10 Hexapeptide repeat of succinyl-transferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000004802 248.0
BYD3_k127_3750454_11 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000183 263.0
BYD3_k127_3750454_12 - - - - 0.000000000000000000000000000000000000000000000000000000000000001305 229.0
BYD3_k127_3750454_13 Glycosyltransferase like family 2 K16562 - - 0.00000000000000000000000000000000000000000000000000000000003465 230.0
BYD3_k127_3750454_14 polysaccharide export protein K01991 - - 0.0000000000000000000000000000000000000000000000000000003019 199.0
BYD3_k127_3750454_15 COG0457 FOG TPR repeat - - - 0.00000000000000000000000000000000000000000001128 188.0
BYD3_k127_3750454_16 CobQ/CobB/MinD/ParA nucleotide binding domain - - - 0.0000000000000000000000000000000000000000008015 169.0
BYD3_k127_3750454_17 - - - - 0.00000000000000000000000000000000000000007829 157.0
BYD3_k127_3750454_18 Polysaccharide deacetylase - - - 0.000000000000000000000000000000001883 140.0
BYD3_k127_3750454_19 PFAM glycosyl transferase group 1 - - - 0.0000000000000000000000000000000463 139.0
BYD3_k127_3750454_2 Cys/Met metabolism PLP-dependent enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004 568.0
BYD3_k127_3750454_20 polysaccharide biosynthetic process - - - 0.000000000000000000000001715 119.0
BYD3_k127_3750454_21 eight transmembrane protein EpsH - - - 0.0000000000000000002568 102.0
BYD3_k127_3750454_22 Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno- heptose - - - 0.00000000000000008128 86.0
BYD3_k127_3750454_24 - - - - 0.00000009054 53.0
BYD3_k127_3750454_25 Glycosyl transferases group 1 - - - 0.000008162 56.0
BYD3_k127_3750454_26 - - - - 0.00003052 56.0
BYD3_k127_3750454_3 DegT/DnrJ/EryC1/StrS aminotransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001027 563.0
BYD3_k127_3750454_4 GDP-mannose 4,6 dehydratase K01784,K02473 - 5.1.3.2,5.1.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000338 552.0
BYD3_k127_3750454_5 PFAM asparagine synthase K01953 - 6.3.5.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 503.0
BYD3_k127_3750454_6 regulator of chromosome condensation, RCC1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 371.0
BYD3_k127_3750454_7 transferase activity, transferring glycosyl groups - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 349.0
BYD3_k127_3750454_8 Polysaccharide chain length determinant protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007273 324.0
BYD3_k127_3750454_9 Bacterial transferase hexapeptide (six repeats) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000002383 261.0
BYD3_k127_3904706_0 Belongs to the GPAT DAPAT family K00631 - 2.3.1.15 2.19e-211 683.0
BYD3_k127_3904706_1 aminopeptidase - - - 3.829e-206 659.0
BYD3_k127_3904706_10 Photosynthesis system II assembly factor YCF48 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003454 276.0
BYD3_k127_3904706_11 Rhomboid family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004481 258.0
BYD3_k127_3904706_12 - - - - 0.0000000000000000000000000000000000000000000000000000000000000001638 228.0
BYD3_k127_3904706_13 Metal binding domain of Ada K10778 - 2.1.1.63 0.0000000000000000000000000000000000000000000000000000000001898 210.0
BYD3_k127_3904706_14 ECF sigma factor - - - 0.00000000000000000000000000000000000000000000000000008817 191.0
BYD3_k127_3904706_15 Domain of unknown function (DUF4442) - - - 0.000000000000000000000000000000000000000002228 161.0
BYD3_k127_3904706_16 thiolester hydrolase activity K06889,K07000 - - 0.000000000000000000000000000000000000002135 153.0
BYD3_k127_3904706_17 Cysteine methyltransferase K07443 - - 0.000000000000000000000003809 106.0
BYD3_k127_3904706_18 His Kinase A (phosphoacceptor) domain - - - 0.000000000006715 72.0
BYD3_k127_3904706_19 - - - - 0.000003599 55.0
BYD3_k127_3904706_2 Protein of unknown function (DUF1329) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001171 529.0
BYD3_k127_3904706_3 growth of symbiont in host cell K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 465.0
BYD3_k127_3904706_4 Protein of unknown function (DUF1302) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004368 452.0
BYD3_k127_3904706_5 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003632 429.0
BYD3_k127_3904706_6 Protein tyrosine kinase K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009489 361.0
BYD3_k127_3904706_7 Oxygenase, catalysing oxidative methylation of damaged DNA K09990 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000332 334.0
BYD3_k127_3904706_8 Phage tail sheath C-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002083 340.0
BYD3_k127_3904706_9 PFAM Short-chain dehydrogenase reductase SDR - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001594 298.0
BYD3_k127_3925009_0 heat shock protein binding K05516 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006703 379.0
BYD3_k127_3925009_1 protein histidine kinase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001097 275.0
BYD3_k127_3925009_2 Anion-transporting ATPase K01551 - 3.6.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000006977 270.0
BYD3_k127_3925009_3 Pyridine nucleotide-disulphide oxidoreductase - - - 0.0000000000000000000000000000000000000000000002677 187.0
BYD3_k127_3925009_5 Gas vesicle synthesis protein GvpL/GvpF - - - 0.000000000000000005702 93.0
BYD3_k127_3925009_6 Gas vesicle synthesis protein GvpL/GvpF - - - 0.00000000001069 74.0
BYD3_k127_3925009_7 gas vesicle protein - - - 0.000000002205 62.0
BYD3_k127_3947347_0 synthase K06044 - 5.4.99.15 2.416e-310 977.0
BYD3_k127_3947347_1 Amylo-alpha-1,6-glucosidase - - - 7.369e-249 788.0
BYD3_k127_3947347_2 Domain of unknown function (DUF3459) K01236 - 3.2.1.141 3.419e-224 718.0
BYD3_k127_3947347_3 Belongs to the glycosyl hydrolase 13 family K01214,K02438 - 3.2.1.196,3.2.1.68 2.091e-196 617.0
BYD3_k127_3947347_4 PFAM Alcohol dehydrogenase GroES domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001116 607.0
BYD3_k127_3947347_5 Glycosyltransferase Family 4 K12995 - 2.4.1.348 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001249 444.0
BYD3_k127_3947347_6 KR domain K07124 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003452 336.0
BYD3_k127_3947347_7 Polyketide cyclase / dehydrase and lipid transport - - - 0.00000000000000000000000000000000000000000000000000000000001398 216.0
BYD3_k127_3947949_0 TonB-dependent Receptor Plug K02014 - - 9.07e-289 909.0
BYD3_k127_3947949_1 protein synthesis factor, GTP-binding K06207 - - 1.904e-279 872.0
BYD3_k127_3947949_10 glycolate oxidase subunit GlcD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002357 484.0
BYD3_k127_3947949_11 TIGRFAM ATPase, FliI YscN family K02412 - 3.6.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001255 456.0
BYD3_k127_3947949_12 Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate K00931 - 2.7.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003357 451.0
BYD3_k127_3947949_13 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001918 422.0
BYD3_k127_3947949_14 Fatty acid desaturase K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002429 417.0
BYD3_k127_3947949_15 Ferredoxin--NADP reductase K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 418.0
BYD3_k127_3947949_16 Belongs to the peptidase M48B family K03799 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001774 404.0
BYD3_k127_3947949_17 Peptidase S9 prolyl oligopeptidase active site - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004055 382.0
BYD3_k127_3947949_18 VIT family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002203 349.0
BYD3_k127_3947949_19 Transcriptional regulatory protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005092 336.0
BYD3_k127_3947949_2 PFAM carboxyl transferase K01969 - 6.4.1.4 1.538e-277 864.0
BYD3_k127_3947949_20 Acyl-CoA thioesterase K10805 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001775 334.0
BYD3_k127_3947949_21 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001057 328.0
BYD3_k127_3947949_22 Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde K01620 - 4.1.2.48 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005354 335.0
BYD3_k127_3947949_23 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD K01802 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000781 311.0
BYD3_k127_3947949_24 The M ring may be actively involved in energy transduction K02409 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001526 282.0
BYD3_k127_3947949_25 enoyl-CoA hydratase K13766,K15312 - 4.2.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000005542 265.0
BYD3_k127_3947949_26 Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02401,K03229,K22510 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001169 261.0
BYD3_k127_3947949_27 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009806 255.0
BYD3_k127_3947949_28 [2Fe-2S] binding domain K03518 - 1.2.5.3 0.000000000000000000000000000000000000000000000000000000000000000000002527 239.0
BYD3_k127_3947949_29 Plays a role in the flagellum-specific transport system K02419 - - 0.000000000000000000000000000000000000000000000000000000000000000000002791 244.0
BYD3_k127_3947949_3 carboxylase K01968 GO:0003674,GO:0003824,GO:0004075,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010565,GO:0016053,GO:0016874,GO:0016879,GO:0019216,GO:0019217,GO:0019222,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032787,GO:0042304,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0045717,GO:0045833,GO:0045922,GO:0046394,GO:0046890,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051055,GO:0062012,GO:0062014,GO:0065007,GO:0071704,GO:0072330,GO:0080090,GO:1901576 6.4.1.4 1.674e-239 755.0
BYD3_k127_3947949_30 Flagellar basal body rod K02390 - - 0.000000000000000000000000000000000000000000000000000000000000000000122 247.0
BYD3_k127_3947949_31 flagellar basal-body rod protein FlgG - - - 0.00000000000000000000000000000000000000000000000000000000000001212 224.0
BYD3_k127_3947949_32 Belongs to the UPF0502 family K09915 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.00000000000000000000000000000000000000000000000000000000001213 221.0
BYD3_k127_3947949_33 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000003508 218.0
BYD3_k127_3947949_34 protein conserved in bacteria K09922 - - 0.00000000000000000000000000000000000000000000000000004605 190.0
BYD3_k127_3947949_35 Transfers electrons from cytochrome c551 to cytochrome oxidase - GO:0005575,GO:0005623,GO:0042597,GO:0044464 - 0.0000000000000000000000000000000000000000000001215 175.0
BYD3_k127_3947949_36 Regulatory protein GntR HTH - - - 0.000000000000000000000000000000000000000004174 172.0
BYD3_k127_3947949_37 Nitroreductase family - - - 0.000000000000000000000000000000000006141 155.0
BYD3_k127_3947949_38 Flagellar basal body rod FlgEFG protein C-terminal K02391,K02392 - - 0.00000000000000000000000000000000001227 150.0
BYD3_k127_3947949_4 Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin K02400 - - 1.24e-227 724.0
BYD3_k127_3947949_40 sigma factor activity K02405 - - 0.00000000000000000000000000000001447 136.0
BYD3_k127_3947949_41 Molybdopterin-guanine dinucleotide biosynthesis protein K03753 - - 0.00000000000000000000000000000005776 138.0
BYD3_k127_3947949_42 Domain of unknown function (DUF4112) - - - 0.00000000000000000000000002117 114.0
BYD3_k127_3947949_44 Flagellar hook capping protein - N-terminal region - - - 0.0000000000000000000000006588 116.0
BYD3_k127_3947949_45 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.000000000000000000000003478 116.0
BYD3_k127_3947949_46 Tetratricopeptide repeat - - - 0.000000000000000000000007088 108.0
BYD3_k127_3947949_47 Tetratricopeptide repeat - - - 0.00000000000000000000000935 107.0
BYD3_k127_3947949_48 Protein of unknown function (DUF2721) - - - 0.0000000000000000000002375 103.0
BYD3_k127_3947949_49 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000004576 104.0
BYD3_k127_3947949_5 Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 2.054e-209 672.0
BYD3_k127_3947949_50 Domain of unknown function (DU1801) - - - 0.000000000000000000001215 104.0
BYD3_k127_3947949_51 - - - - 0.00000000000000005638 92.0
BYD3_k127_3947949_54 FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02417 - - 0.000000000000281 73.0
BYD3_k127_3947949_55 Flagellar biosynthetic protein FliR K02421 - - 0.000000000003621 71.0
BYD3_k127_3947949_56 - - - - 0.00000000003037 68.0
BYD3_k127_3947949_57 bacterial-type flagellum organization K02411,K03223 - - 0.00000004356 65.0
BYD3_k127_3947949_58 - - - - 0.00000005952 59.0
BYD3_k127_3947949_59 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.0000002485 59.0
BYD3_k127_3947949_6 Oxidoreductase family, NAD-binding Rossmann fold - - - 4.417e-198 629.0
BYD3_k127_3947949_60 PFAM flagellar hook-basal body complex protein FliE K02408 - - 0.0000002572 61.0
BYD3_k127_3947949_61 FlhB HrpN YscU SpaS Family K04061 - - 0.000008866 56.0
BYD3_k127_3947949_62 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.00002423 57.0
BYD3_k127_3947949_7 dehydrogenase K00253 - 1.3.8.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001376 561.0
BYD3_k127_3947949_8 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K07250 - 2.6.1.19,2.6.1.22 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002051 554.0
BYD3_k127_3947949_9 Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate K00147 GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004434 553.0
BYD3_k127_4012854_0 Tryptophan halogenase K14266 - 1.14.19.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005403 561.0
BYD3_k127_4012854_1 Tryptophan halogenase K14266 - 1.14.19.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000004457 284.0
BYD3_k127_4085189_0 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane K03070 - - 0.0 1129.0
BYD3_k127_4085189_1 receptor - - - 0.0 1056.0
BYD3_k127_4085189_2 Oxidoreductase K19813 - 1.1.5.9 1.38e-230 732.0
BYD3_k127_4085189_3 peptidase K01278 - 3.4.14.5 1.987e-230 736.0
BYD3_k127_4085189_4 COG1505 Serine proteases of the peptidase family S9A K01322 - 3.4.21.26 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006698 313.0
BYD3_k127_4085189_5 COG0739 Membrane proteins related to metalloendopeptidases - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000009016 269.0
BYD3_k127_4085189_6 - - - - 0.0000000000000000000000000000000000002396 149.0
BYD3_k127_4085189_7 Belongs to the Nudix hydrolase family K03574 - 3.6.1.55 0.0000000000000000000000000000005625 126.0
BYD3_k127_4085189_8 Gluconate 2-dehydrogenase subunit 3 - - - 0.000000000000000000000000004805 117.0
BYD3_k127_4085189_9 Protein of unknown function (DUF721) - - - 0.0008496 48.0
BYD3_k127_4304530_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 GO:0003674,GO:0003676,GO:0003677,GO:0003824,GO:0003916,GO:0003918,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006265,GO:0006351,GO:0006725,GO:0006807,GO:0006996,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016887,GO:0017111,GO:0018130,GO:0019438,GO:0032774,GO:0034335,GO:0034641,GO:0034645,GO:0034654,GO:0042221,GO:0042493,GO:0042623,GO:0042802,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051276,GO:0061505,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097659,GO:0140097,GO:1901360,GO:1901362,GO:1901363,GO:1901576 5.99.1.3 0.0 1217.0
BYD3_k127_4304530_1 Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine K00831 - 2.6.1.52 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004552 422.0
BYD3_k127_4304530_2 Tryptophanyl-tRNA synthetase K01867 - 6.1.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004847 376.0
BYD3_k127_4304530_3 DNA recombination protein RmuC K09760 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002598 350.0
BYD3_k127_4304530_4 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves K05896 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 332.0
BYD3_k127_4304530_5 O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway K00568 - 2.1.1.222,2.1.1.64 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002711 301.0
BYD3_k127_4304530_6 reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000335 261.0
BYD3_k127_4304530_7 Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves K06024 - - 0.0000000000000000000000000000000000000000000000000000000000000002121 232.0
BYD3_k127_4304530_8 HAD-superfamily hydrolase, subfamily IA, variant 1 K22292 - 3.1.3.105 0.000000000000000000000000000000000000000000000000000000000000003166 224.0
BYD3_k127_4304530_9 Belongs to the pseudouridine synthase RsuA family K06178 - 5.4.99.22 0.0000000000000000000000000000000000001116 152.0
BYD3_k127_4390565_0 flagellar hook-associated protein K02396 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002155 458.0
BYD3_k127_4390565_1 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003148 304.0
BYD3_k127_4390565_2 Rod binding protein K02395 - - 0.000000000000000000000000000000000000000000000000000000000001688 223.0
BYD3_k127_4390565_3 TIGRFAM Flagellar hook-associated protein 3 K02397 - - 0.000000000000000000000000000000000000000000000000000000000009905 217.0
BYD3_k127_4422557_0 Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transduction protein PII (GlnB) which indicates the nitrogen status of the cell K00982 - 2.7.7.42,2.7.7.89 5.677e-236 762.0
BYD3_k127_4422557_1 Radical SAM - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 621.0
BYD3_k127_4422557_10 Glycosyltransferase family 9 (heptosyltransferase) K02849 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 381.0
BYD3_k127_4422557_11 COG1519 3-deoxy-D-manno-octulosonic-acid transferase K02527 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005975,GO:0006629,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016020,GO:0016051,GO:0016740,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044464,GO:0046467,GO:0046493,GO:0071704,GO:0071944,GO:0090407,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003553 385.0
BYD3_k127_4422557_12 glycosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003326 370.0
BYD3_k127_4422557_13 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001032 347.0
BYD3_k127_4422557_14 Acyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004852 335.0
BYD3_k127_4422557_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008289 325.0
BYD3_k127_4422557_16 type I secretion outer membrane protein, TolC K12340 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002603 298.0
BYD3_k127_4422557_17 ABC transporter transmembrane region - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003768 303.0
BYD3_k127_4422557_18 Uncharacterised nucleotidyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 295.0
BYD3_k127_4422557_19 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000001256 254.0
BYD3_k127_4422557_2 Mg-protoporphyrin IX monomethyl ester oxidative cyclase K04034 - 1.21.98.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002515 574.0
BYD3_k127_4422557_20 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002899 245.0
BYD3_k127_4422557_21 Glutathione-dependent formaldehyde-activating enzyme - - - 0.000000000000000000000000000000000000000000000000000000000000000007506 227.0
BYD3_k127_4422557_22 methyltransferase K16048 - - 0.000000000000000000000000000000000000000000000000000000000000000008344 237.0
BYD3_k127_4422557_23 transcription factor binding K15836 - - 0.000000000000000000000000000000000000000000000000000000000000000008994 244.0
BYD3_k127_4422557_24 LysE type translocator - - - 0.00000000000000000000000000000000000000000000000000000000000001434 222.0
BYD3_k127_4422557_25 PFAM Alpha beta hydrolase fold-1 - - - 0.000000000000000000000000000000000000000000000000000000000002982 218.0
BYD3_k127_4422557_26 Catalyzes the ATP-dependent phosphorylation of the 3- deoxy-D-manno-octulosonic acid (Kdo) residue in Kdo-lipid IV(A) at the 4-OH position K11211 - 2.7.1.166 0.000000000000000000000000000000000000000000000000000000000004841 216.0
BYD3_k127_4422557_27 Serine kinase - - - 0.00000000000000000000000000000000000000000000000000000000001476 235.0
BYD3_k127_4422557_28 SelR domain K07305 - 1.8.4.12 0.0000000000000000000000000000000000000000000000000000000002145 210.0
BYD3_k127_4422557_29 radical SAM domain protein K06137,K06138 - 1.3.3.11 0.000000000000000000000000000000000000000000000000000000001946 212.0
BYD3_k127_4422557_3 Metallopeptidase family M24 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006942 546.0
BYD3_k127_4422557_30 protocatechuate 3,4-dioxygenase beta subunit K00449 - 1.13.11.3 0.000000000000000000000000000000000000000000000000000000002529 206.0
BYD3_k127_4422557_31 hydrolase activity, acting on ester bonds - - - 0.0000000000000000000000000000000000000000000000000000004097 207.0
BYD3_k127_4422557_32 COG0346 Lactoylglutathione lyase and related lyases - - - 0.000000000000000000000000000000000000000000000000000001944 193.0
BYD3_k127_4422557_33 Methyltransferase domain - - - 0.0000000000000000000000000000000000000000000000000002155 198.0
BYD3_k127_4422557_34 PFAM protein-L-isoaspartate(D-aspartate) O-methyltransferase K00573 - 2.1.1.77 0.00000000000000000000000000000000000000000000000002661 186.0
BYD3_k127_4422557_35 FMN binding - - - 0.00000000000000000000000000000000000000000000000003902 198.0
BYD3_k127_4422557_36 methyltransferase K03183 - 2.1.1.163,2.1.1.201 0.000000000000000000000000000000000000000003328 167.0
BYD3_k127_4422557_37 gag-polyprotein putative aspartyl protease - - - 0.00000000000000000000000000000000000000001955 166.0
BYD3_k127_4422557_38 PFAM glycosyl transferase family 9 - - - 0.0000000000000000000000000000000000000113 154.0
BYD3_k127_4422557_39 - - - - 0.00000000000000000000000000000000009786 145.0
BYD3_k127_4422557_4 B12 binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002578 537.0
BYD3_k127_4422557_41 rhodanese-related sulfurtransferase - - - 0.0000000000000000000000000001146 118.0
BYD3_k127_4422557_42 Glycosyltransferase like family 2 - - - 0.0000000000000000000000000004312 125.0
BYD3_k127_4422557_43 Methyltransferase - - - 0.00000000000000000000004018 108.0
BYD3_k127_4422557_44 Zinc-finger domain - - - 0.0000000000000000002728 97.0
BYD3_k127_4422557_45 Pfam AhpC TSA family - - - 0.0000000000000000008932 102.0
BYD3_k127_4422557_46 rRNA processing K21402 - - 0.0000000000000003034 93.0
BYD3_k127_4422557_5 Diguanylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001782 502.0
BYD3_k127_4422557_6 DNA alkylation repair - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001006 458.0
BYD3_k127_4422557_7 A domain family that is part of the cupin metalloenzyme superfamily. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008721 422.0
BYD3_k127_4422557_8 Glucose-fructose oxidoreductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002756 420.0
BYD3_k127_4422557_9 Hexosyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001527 404.0
BYD3_k127_4547578_0 Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine - - - 2.566e-280 892.0
BYD3_k127_4547578_1 TIGRFAM type IV-A pilus assembly ATPase PilB K02652 - - 5.346e-222 702.0
BYD3_k127_4547578_10 Histidine kinase K02668 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 382.0
BYD3_k127_4547578_11 Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue K02654 - 3.4.23.43 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003529 335.0
BYD3_k127_4547578_12 Protein of unknown function (DUF229) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006804 316.0
BYD3_k127_4547578_13 Protein of unknown function (DUF229) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000005274 278.0
BYD3_k127_4547578_14 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000005488 261.0
BYD3_k127_4547578_15 - - - - 0.00000000000000000000000000000000000000000000000000000000000407 231.0
BYD3_k127_4547578_16 Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity K18778 - - 0.00000000000000000000000000000000000000000000000000000000005042 214.0
BYD3_k127_4547578_17 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K00859 GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 0.00000000000000000000000000000000000000000000000000000000005245 212.0
BYD3_k127_4547578_18 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000004433 176.0
BYD3_k127_4547578_19 signal sequence binding K07152 - - 0.00000000000000000000000000000000000000002892 163.0
BYD3_k127_4547578_2 Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source K01950 - 6.3.5.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009954 614.0
BYD3_k127_4547578_20 Tfp pilus assembly protein, major pilin PilA K02650 - - 0.00000000000000000000000000000000000003849 149.0
BYD3_k127_4547578_21 lysyltransferase activity K07027 - - 0.000000000000000000000000006482 123.0
BYD3_k127_4547578_22 Methyltransferase FkbM domain - - - 0.00000000000000000000001141 113.0
BYD3_k127_4547578_3 Multicopper oxidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 527.0
BYD3_k127_4547578_4 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains K02667 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001301 517.0
BYD3_k127_4547578_5 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit K01903 GO:0003674,GO:0003824,GO:0004774,GO:0004775,GO:0006082,GO:0006091,GO:0006099,GO:0006101,GO:0008150,GO:0008152,GO:0009060,GO:0009987,GO:0015980,GO:0016874,GO:0016877,GO:0016878,GO:0016999,GO:0017144,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0045333,GO:0055114,GO:0071704,GO:0072350 6.2.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000295 511.0
BYD3_k127_4547578_6 PFAM Bacterial type II secretion system protein F domain K02653 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001429 495.0
BYD3_k127_4547578_7 COG1505 Serine proteases of the peptidase family S9A K01322 - 3.4.21.26 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005688 471.0
BYD3_k127_4547578_8 Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit K01902 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009361,GO:0009987,GO:0016310,GO:0019538,GO:0032991,GO:0036211,GO:0042709,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0045239,GO:0046777,GO:0071704,GO:1901564,GO:1902494 6.2.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004041 449.0
BYD3_k127_4547578_9 PFAM Glycosyl transferase family 2 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009099 387.0
BYD3_k127_4564034_0 Castor and Pollux, part of voltage-gated ion channel - - - 4.001e-278 882.0
BYD3_k127_4564034_1 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 - - 7.407e-269 835.0
BYD3_k127_4564034_10 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines K05540 GO:0002943,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009314,GO:0009451,GO:0009628,GO:0009987,GO:0010467,GO:0016070,GO:0016491,GO:0016627,GO:0017150,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0050896,GO:0055114,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001455 410.0
BYD3_k127_4564034_11 MMPL family K07003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005656 398.0
BYD3_k127_4564034_12 FAD linked oxidase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000354 398.0
BYD3_k127_4564034_13 DnaJ molecular chaperone homology domain K05516 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004493 353.0
BYD3_k127_4564034_14 mechanosensitive ion channel - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001061 314.0
BYD3_k127_4564034_15 Ribosomal protein L11 methyltransferase K02687 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003881 279.0
BYD3_k127_4564034_16 COG0491 Zn-dependent hydrolases, including glyoxylases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000006589 267.0
BYD3_k127_4564034_17 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000001395 247.0
BYD3_k127_4564034_18 Beta-lactamase K17836 - 3.5.2.6 0.0000000000000000000000000000000000000000000000000000000000000000003457 239.0
BYD3_k127_4564034_19 metal-dependent phosphoesterases (PHP family) K07053 GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004534,GO:0004536,GO:0004540,GO:0005488,GO:0006139,GO:0006259,GO:0006521,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008252,GO:0008409,GO:0009987,GO:0010565,GO:0016070,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0016796,GO:0016895,GO:0016896,GO:0019222,GO:0030145,GO:0031323,GO:0033238,GO:0034641,GO:0035312,GO:0042578,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0051171,GO:0062012,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0090305,GO:0090357,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360 3.1.3.97 0.00000000000000000000000000000000000000000000000000000000000001258 225.0
BYD3_k127_4564034_2 oxidase, subunit K00425 - 1.10.3.14 9.912e-236 738.0
BYD3_k127_4564034_20 Uncharacterized ACR, YdiU/UPF0061 family - - - 0.00000000000000000000000000000000000000000000000000000000000001726 222.0
BYD3_k127_4564034_21 - - - - 0.000000000000000000000000000000000000000000000000000000002762 209.0
BYD3_k127_4564034_22 hydrolase K20881 - 3.1.3.5 0.000000000000000000000000000000000000000000000000000006589 201.0
BYD3_k127_4564034_23 Catalyzes a trans-dehydration via an enolate intermediate K03786 - 4.2.1.10 0.000000000000000000000000000000000000000000000000000007955 196.0
BYD3_k127_4564034_24 CHAD domain containing protein - - - 0.0000000000000000000000000000000000000000000000002407 202.0
BYD3_k127_4564034_25 Protein of unknown function (DUF805) - - - 0.000000000000000000000000000000000000000000000003379 177.0
BYD3_k127_4564034_26 first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA K02160 - - 0.000000000000000000000000000000000000000000000006802 177.0
BYD3_k127_4564034_27 Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter K04078 - - 0.00000000000000000000000000000000000000000000859 164.0
BYD3_k127_4564034_28 Belongs to the thioredoxin family K03671 - - 0.0000000000000000000000000000000000000000001387 162.0
BYD3_k127_4564034_29 - - - - 0.00000000000000000000000000000000000000002272 162.0
BYD3_k127_4564034_3 TIGRFAM acetyl-CoA carboxylase, biotin carboxylase K01961 - 6.3.4.14,6.4.1.2 4.899e-225 703.0
BYD3_k127_4564034_30 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000007894 156.0
BYD3_k127_4564034_31 Protein chain release factor B K15034 GO:0003674,GO:0003676,GO:0003723,GO:0003747,GO:0003824,GO:0004045,GO:0005488,GO:0006412,GO:0006414,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0008079,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016043,GO:0016150,GO:0016787,GO:0016788,GO:0019222,GO:0019538,GO:0022411,GO:0031323,GO:0031326,GO:0032268,GO:0032984,GO:0034248,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044877,GO:0050789,GO:0050794,GO:0051171,GO:0051246,GO:0052689,GO:0060255,GO:0065007,GO:0071704,GO:0071840,GO:0072344,GO:0080090,GO:0097159,GO:0140098,GO:0140101,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:2000112 - 0.0000000000000000000000000000005599 127.0
BYD3_k127_4564034_32 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. - - - 0.00000000000000000000000009091 124.0
BYD3_k127_4564034_33 COG0526 Thiol-disulfide isomerase and thioredoxins - - - 0.000000000000000000000001177 113.0
BYD3_k127_4564034_34 phosphohistidine phosphatase, SixA K08296 - - 0.00000000000000000000000395 112.0
BYD3_k127_4564034_35 Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters K03557 GO:0000018,GO:0000229,GO:0000785,GO:0000786,GO:0000787,GO:0000789,GO:0000976,GO:0000984,GO:0000985,GO:0001017,GO:0001046,GO:0001047,GO:0001067,GO:0001121,GO:0001130,GO:0001131,GO:0001140,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005694,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008301,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016032,GO:0016070,GO:0018130,GO:0019042,GO:0019045,GO:0019046,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031421,GO:0032359,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044374,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044427,GO:0044444,GO:0044446,GO:0044464,GO:0044815,GO:0045892,GO:0045893,GO:0045911,GO:0045934,GO:0045935,GO:0046483,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0051704,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000001345 91.0
BYD3_k127_4564034_36 Belongs to the UPF0270 family K09898 - - 0.00000000000001139 77.0
BYD3_k127_4564034_37 small protein containing a coiled-coil domain - - - 0.00000000000004339 75.0
BYD3_k127_4564034_38 MerR HTH family regulatory protein K18997 - - 0.000000000000367 78.0
BYD3_k127_4564034_39 TIGRFAM MJ0042 family finger-like protein - - - 0.000000001835 70.0
BYD3_k127_4564034_4 Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template K03628 - - 1.934e-223 704.0
BYD3_k127_4564034_40 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.00000003652 64.0
BYD3_k127_4564034_41 Domain of unknown function (DUF4412) - - - 0.00000006249 63.0
BYD3_k127_4564034_42 ORF located using - - - 0.000006928 55.0
BYD3_k127_4564034_5 bifunctional purine biosynthesis protein purh K00602 GO:0003674,GO:0003824,GO:0004643,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016741,GO:0016742,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.1.2.3,3.5.4.10 3.817e-212 673.0
BYD3_k127_4564034_6 Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps K04084 - 1.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008697 582.0
BYD3_k127_4564034_7 DEAD-box RNA helicase involved in RNA degradation. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K03732 - 3.6.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002485 537.0
BYD3_k127_4564034_8 Belongs to the GARS family K01945,K13713 GO:0000166,GO:0003674,GO:0003824,GO:0004637,GO:0005488,GO:0005524,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006950,GO:0006974,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016874,GO:0016879,GO:0016887,GO:0017076,GO:0017111,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0033554,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0050896,GO:0051716,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 6.3.2.6,6.3.4.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003016 536.0
BYD3_k127_4564034_9 Cytochrome bd terminal oxidase subunit II K00426 - 1.10.3.14 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008107 467.0
BYD3_k127_4603751_0 Belongs to the peptidase M16 family K07263 - - 4.542e-312 1012.0
BYD3_k127_4603751_1 TonB dependent receptor K02014 - - 6.943e-296 931.0
BYD3_k127_4603751_10 CHRD domain - - - 0.00000000000000000000000000000000001458 147.0
BYD3_k127_4603751_11 glyoxalase bleomycin resistance protein dioxygenase - - - 0.00000000000000000000000000000000001811 143.0
BYD3_k127_4603751_12 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000002815 120.0
BYD3_k127_4603751_13 - - - - 0.000000000000000000000000342 108.0
BYD3_k127_4603751_14 - - - - 0.0000000000000000000003117 101.0
BYD3_k127_4603751_15 MAPEG family - - - 0.000000000000000000001832 106.0
BYD3_k127_4603751_16 Helix-turn-helix domain - - - 0.000000000005812 73.0
BYD3_k127_4603751_17 Putative prokaryotic signal transducing protein - - - 0.00000000002344 73.0
BYD3_k127_4603751_18 LytTr DNA-binding domain - - - 0.0008562 43.0
BYD3_k127_4603751_2 ABC-type multidrug transport system ATPase and permease K06147 - - 5.796e-253 794.0
BYD3_k127_4603751_3 PFAM ABC transporter K01990 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0009314,GO:0009628,GO:0010165,GO:0010212,GO:0016020,GO:0044464,GO:0050896,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008975 484.0
BYD3_k127_4603751_4 Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen K00525 - 1.17.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001506 434.0
BYD3_k127_4603751_5 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001873 388.0
BYD3_k127_4603751_6 COG0209 Ribonucleotide reductase, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009245 296.0
BYD3_k127_4603751_7 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.00000000000000000000000000000000000000000000000000000000000000008382 229.0
BYD3_k127_4603751_8 - - - - 0.00000000000000000000000000000000000000000000000001147 185.0
BYD3_k127_4603751_9 Reprolysin (M12B) family zinc metalloprotease - - - 0.000000000000000000000000000000000000000001433 181.0
BYD3_k127_4712525_0 receptor K02014 - - 6.923e-265 837.0
BYD3_k127_4712525_1 Concanavalin A-like lectin/glucanases superfamily - - - 1.1e-234 753.0
BYD3_k127_4712525_10 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001239 426.0
BYD3_k127_4712525_11 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001142 414.0
BYD3_k127_4712525_12 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001883 360.0
BYD3_k127_4712525_13 Protein of unknown function (DUF3570) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 359.0
BYD3_k127_4712525_14 PFAM Dienelactone hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009675 284.0
BYD3_k127_4712525_15 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003289 280.0
BYD3_k127_4712525_16 amidohydrolase - - - 0.000000000000000000000000000000000000000000000000000000000000000000002591 251.0
BYD3_k127_4712525_17 COG3103 SH3 domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000002261 222.0
BYD3_k127_4712525_18 MotA/TolQ/ExbB proton channel family - - - 0.00000000000000000000000000000000000000000000000000000000002687 213.0
BYD3_k127_4712525_19 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000000000000000000000000000001919 211.0
BYD3_k127_4712525_2 Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle K01595 GO:0003674,GO:0003824,GO:0004611,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008964,GO:0016829,GO:0016830,GO:0016831,GO:0044424,GO:0044444,GO:0044464 4.1.1.31 5.356e-223 725.0
BYD3_k127_4712525_20 - - - - 0.00000000000000000000000000000000000000000000000000000004873 204.0
BYD3_k127_4712525_21 Transcriptional regulatory protein, C terminal - - - 0.00000000000000000000000000000000000000000000000003973 205.0
BYD3_k127_4712525_22 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000004044 197.0
BYD3_k127_4712525_23 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000005139 177.0
BYD3_k127_4712525_24 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.0000000000000000000000000000000000000000000000006045 186.0
BYD3_k127_4712525_25 Thioredoxin-like - - - 0.000000000000000000000000000000000000000000000005112 177.0
BYD3_k127_4712525_26 COG0697 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.0000000000000000000000000000000000000000002131 175.0
BYD3_k127_4712525_27 acetyltransferase K18816 GO:0003674,GO:0003824,GO:0008080,GO:0008150,GO:0016407,GO:0016410,GO:0016740,GO:0016746,GO:0016747,GO:0034069,GO:0042221,GO:0046677,GO:0047663,GO:0050896 2.3.1.82 0.0000000000000000000000000000000000000000004963 164.0
BYD3_k127_4712525_28 Bacterial regulatory proteins, tetR family - - - 0.0000000000000000000000000000000002122 141.0
BYD3_k127_4712525_29 phosphate regulon transcriptional regulatory protein PhoB K07657 GO:0001098,GO:0001108,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006355,GO:0008150,GO:0009889,GO:0010468,GO:0010556,GO:0019219,GO:0019222,GO:0031323,GO:0031326,GO:0042802,GO:0043254,GO:0044087,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0080090,GO:1903506,GO:2000112,GO:2000142,GO:2001141 - 0.000000000000000000000000000000001881 138.0
BYD3_k127_4712525_3 COG0823 Periplasmic component of the Tol biopolymer transport system - - - 1.203e-214 699.0
BYD3_k127_4712525_30 Thioredoxin K03671 - - 0.000000000000000000000000000000002062 132.0
BYD3_k127_4712525_31 CAAX protease self-immunity - - - 0.000000000000000000000000000000004508 140.0
BYD3_k127_4712525_32 membrane - - - 0.000000000000000000000000000000006669 130.0
BYD3_k127_4712525_33 Thiol-disulfide isomerase and thioredoxins - - - 0.00000000000000000000000001143 116.0
BYD3_k127_4712525_34 COG0848 Biopolymer transport protein - - - 0.00000000000000000000000007481 113.0
BYD3_k127_4712525_35 Biopolymer transport protein ExbD/TolR - - - 0.0000000000000000000000001795 113.0
BYD3_k127_4712525_36 Bacterial transcriptional activator domain - - - 0.0000000000000000000000003092 113.0
BYD3_k127_4712525_37 Domain of unknown function (DUF4266) - - - 0.000000000000000000001083 96.0
BYD3_k127_4712525_38 - - - - 0.000000000000000000002683 102.0
BYD3_k127_4712525_39 Tetratricopeptide repeat - - - 0.000000000000000000007747 109.0
BYD3_k127_4712525_4 ABC transporter transmembrane region K06147,K11085 - - 7.911e-198 633.0
BYD3_k127_4712525_40 - - - - 0.000000000000000002622 100.0
BYD3_k127_4712525_42 - - - - 0.0000000366 63.0
BYD3_k127_4712525_43 OmpA-like transmembrane domain K03286 - - 0.0002232 53.0
BYD3_k127_4712525_5 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002695 634.0
BYD3_k127_4712525_6 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 570.0
BYD3_k127_4712525_7 ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003749 523.0
BYD3_k127_4712525_8 COG3119 Arylsulfatase A and related enzymes K01133 - 3.1.6.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004417 497.0
BYD3_k127_4712525_9 Belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family K03455 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001254 498.0
BYD3_k127_4765391_0 Belongs to the nitrite and sulfite reductase 4Fe-4S domain family K00362 - 1.7.1.15 5.135e-294 913.0
BYD3_k127_4765391_1 Rieske-like [2Fe-2S] domain K00362,K05297 - 1.18.1.1,1.7.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007242 599.0
BYD3_k127_4765391_2 Belongs to the prokaryotic molybdopterin-containing oxidoreductase family K00372 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000305 417.0
BYD3_k127_4794803_0 PQQ-like domain K00117 - 1.1.5.2 9.846e-308 960.0
BYD3_k127_4794803_1 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 1.322e-256 807.0
BYD3_k127_4794803_10 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003404 509.0
BYD3_k127_4794803_11 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 502.0
BYD3_k127_4794803_12 Porphyromonas-type peptidyl-arginine deiminase K10536 - 3.5.3.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005435 496.0
BYD3_k127_4794803_13 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004641 473.0
BYD3_k127_4794803_14 TonB dependent receptor K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 468.0
BYD3_k127_4794803_15 FAD dependent oxidoreductase K09471 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 449.0
BYD3_k127_4794803_16 Required for the activity of the bacterial periplasmic transport system of putrescine K02055,K11069,K11073 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004829 441.0
BYD3_k127_4794803_17 glutamine synthetase K01915,K09470 GO:0003674,GO:0003824,GO:0006576,GO:0006595,GO:0006598,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009308,GO:0009310,GO:0009445,GO:0009447,GO:0009987,GO:0016874,GO:0016879,GO:0016880,GO:0034024,GO:0034641,GO:0042402,GO:0044106,GO:0044237,GO:0071704,GO:0097164,GO:1901564,GO:1901565,GO:1901575 6.3.1.11,6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009144 416.0
BYD3_k127_4794803_18 aminotransferase K14287 - 2.6.1.88 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001508 408.0
BYD3_k127_4794803_19 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003568 402.0
BYD3_k127_4794803_2 Isocitrate dehydrogenase - - - 1.375e-219 687.0
BYD3_k127_4794803_20 LysR substrate binding domain K03566 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009802 392.0
BYD3_k127_4794803_21 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K11076 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005704 388.0
BYD3_k127_4794803_22 GIY-YIG type nucleases (URI domain) K02342 - 2.7.7.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002032 401.0
BYD3_k127_4794803_23 Trehalose utilisation - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002921 373.0
BYD3_k127_4794803_24 Putrescine transport system permease K11075 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001407 373.0
BYD3_k127_4794803_25 COG1177 ABC-type spermidine putrescine transport system, permease component II K11074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007787 338.0
BYD3_k127_4794803_26 WD40-like Beta Propeller Repeat - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007647 326.0
BYD3_k127_4794803_27 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002934 314.0
BYD3_k127_4794803_28 Gamma-glutamyl-gamma-aminobutyrate hydrolase K07010 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002075 314.0
BYD3_k127_4794803_29 NAD dependent epimerase/dehydratase family K05281 - 1.3.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004326 312.0
BYD3_k127_4794803_3 Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA K12297 - 2.1.1.173,2.1.1.264 9.627e-219 703.0
BYD3_k127_4794803_30 Polyphosphate kinase 2 (PPK2) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 317.0
BYD3_k127_4794803_31 ATPases associated with a variety of cellular activities K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 299.0
BYD3_k127_4794803_32 Response regulator receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000288 299.0
BYD3_k127_4794803_33 3-oxo-5-alpha-steroid 4-dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000003057 289.0
BYD3_k127_4794803_34 carbon-nitrogen hydrolase K13566 - 3.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000009677 286.0
BYD3_k127_4794803_35 Protein of unknown function (DUF3500) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000003585 276.0
BYD3_k127_4794803_36 methionine gamma-lyase K01739,K01761 - 2.5.1.48,4.4.1.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000004455 276.0
BYD3_k127_4794803_37 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000002685 271.0
BYD3_k127_4794803_38 Polysaccharide deacetylase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000667 264.0
BYD3_k127_4794803_39 Belongs to the Dps family K04047 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000291 244.0
BYD3_k127_4794803_4 Acyltransferase - - - 1.21e-213 687.0
BYD3_k127_4794803_40 Cupin domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000002138 235.0
BYD3_k127_4794803_41 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000211 255.0
BYD3_k127_4794803_42 GCN5-related N-acetyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000002358 214.0
BYD3_k127_4794803_43 redox protein regulator of disulfide bond formation - - - 0.0000000000000000000000000000000000000000000000000000002592 197.0
BYD3_k127_4794803_44 Domain of unknown function (DUF1772) - - - 0.000000000000000000000000000000000000000000000000000002828 194.0
BYD3_k127_4794803_45 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000001554 197.0
BYD3_k127_4794803_46 serine threonine protein kinase - - - 0.000000000000000000000000000000000000000000000155 192.0
BYD3_k127_4794803_47 Polyketide cyclase / dehydrase and lipid transport - - - 0.0000000000000000000000000000000000000000003307 167.0
BYD3_k127_4794803_48 helix_turn_helix gluconate operon transcriptional repressor K07979 - - 0.00000000000000000000000000000000000000158 150.0
BYD3_k127_4794803_49 Domain of unknown function (DU1801) - - - 0.00000000000000000000000000000000005361 140.0
BYD3_k127_4794803_5 Belongs to the aldehyde dehydrogenase family K00130 - 1.2.1.8 4.154e-209 660.0
BYD3_k127_4794803_50 META domain K09914 - - 0.00000000000000000000000000003905 121.0
BYD3_k127_4794803_51 Domain of unknown function (DUF4184) - - - 0.0000000000000000000000000002494 124.0
BYD3_k127_4794803_52 Belongs to the glycosyl hydrolase family 6 - - - 0.000000000000000000000000002976 128.0
BYD3_k127_4794803_53 Helix-turn-helix domain - - - 0.0000000000000000000000000112 120.0
BYD3_k127_4794803_54 Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid K00077 - 1.1.1.169 0.000000000000000005763 95.0
BYD3_k127_4794803_55 Phospholipid methyltransferase - - - 0.00000000000000001857 93.0
BYD3_k127_4794803_57 - - - - 0.000000003809 62.0
BYD3_k127_4794803_58 negative regulation of ER-associated ubiquitin-dependent protein catabolic process K16365 GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006457,GO:0006508,GO:0006511,GO:0006605,GO:0006612,GO:0006620,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0006996,GO:0007029,GO:0008022,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009266,GO:0009408,GO:0009628,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009987,GO:0010033,GO:0010243,GO:0010256,GO:0010498,GO:0010604,GO:0010605,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0016192,GO:0019222,GO:0019538,GO:0019941,GO:0030162,GO:0030163,GO:0030433,GO:0030544,GO:0031072,GO:0031323,GO:0031324,GO:0031325,GO:0031329,GO:0031330,GO:0031331,GO:0031333,GO:0032268,GO:0032269,GO:0032270,GO:0032434,GO:0032435,GO:0032436,GO:0032459,GO:0032460,GO:0032947,GO:0032991,GO:0033036,GO:0033365,GO:0033554,GO:0034613,GO:0034976,GO:0036503,GO:0042176,GO:0042177,GO:0042221,GO:0042802,GO:0042803,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043254,GO:0043621,GO:0043632,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0044877,GO:0045047,GO:0045048,GO:0045184,GO:0045732,GO:0045861,GO:0045862,GO:0046907,GO:0046982,GO:0046983,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0050789,GO:0050794,GO:0050896,GO:0051087,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051205,GO:0051234,GO:0051246,GO:0051247,GO:0051248,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0061024,GO:0061136,GO:0065007,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071816,GO:0071840,GO:0072379,GO:0072380,GO:0072594,GO:0072599,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0090150,GO:1901564,GO:1901565,GO:1901575,GO:1901698,GO:1901799,GO:1901800,GO:1903050,GO:1903051,GO:1903052,GO:1903069,GO:1903070,GO:1903071,GO:1903332,GO:1903334,GO:1903362,GO:1903363,GO:1903364,GO:1903573,GO:1903644,GO:1903646,GO:1904288,GO:1904292,GO:1904293,GO:1904294,GO:1905897,GO:1905898,GO:2000058,GO:2000059,GO:2000060 - 0.00000009159 60.0
BYD3_k127_4794803_6 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K00822 - 2.6.1.18 6.381e-206 648.0
BYD3_k127_4794803_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K12256 - 2.6.1.113 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003633 612.0
BYD3_k127_4794803_8 Glutamine synthetase, catalytic domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006186 605.0
BYD3_k127_4794803_9 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002971 523.0
BYD3_k127_480194_0 nitrite reductase [NAD(P)H] activity K00158,K00363,K03809,K05710 - 1.2.3.3,1.6.5.2,1.7.1.15 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000993 444.0
BYD3_k127_480194_1 PFAM major facilitator superfamily MFS_1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002596 437.0
BYD3_k127_480194_2 Catalytic LigB subunit of aromatic ring-opening dioxygenase K04101 - 1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006608 414.0
BYD3_k127_480194_3 NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form K12410 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001539 335.0
BYD3_k127_480194_4 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001397 327.0
BYD3_k127_480194_5 Domain of unknown function (DUF4010) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000007687 301.0
BYD3_k127_480194_6 Aromatic-ring-opening dioxygenase LigAB, LigA subunit K04100 - 1.13.11.8 0.000000000000000000000000000000000000000002447 160.0
BYD3_k127_480194_7 Circularly permuted ATP-grasp type 2 - - - 0.000000000000000000000000000000000000001245 147.0
BYD3_k127_4880054_0 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02621 - - 3.99e-310 967.0
BYD3_k127_4880054_1 Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule K02622 - - 1.195e-289 900.0
BYD3_k127_4880054_2 Cysteine-rich domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006189 400.0
BYD3_k127_4880054_3 Protein of unknown function (DUF3501) - - - 0.00000000000000000000000000000000000000000000000000000000000000001554 242.0
BYD3_k127_4880054_4 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000001354 129.0
BYD3_k127_4880054_5 SnoaL-like domain - - - 0.0000000000000000000000001515 113.0
BYD3_k127_4921542_0 Protein of unknown function, DUF255 K06888 - - 1.769e-252 796.0
BYD3_k127_4921542_1 Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis K00560 - 2.1.1.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007261 457.0
BYD3_k127_4921542_10 Nuclear protein SET K07117 - - 0.00000000000000000000000000000000000000000004589 168.0
BYD3_k127_4921542_11 Bacterial protein of unknown function (DUF882) - - - 0.00000000000000000000000000000000000000004754 159.0
BYD3_k127_4921542_12 bis(5'-adenosyl)-triphosphatase activity - - - 0.0000000000000000000000000000000000000001365 155.0
BYD3_k127_4921542_13 PFAM TfoX domain protein K07343 - - 0.0000000000000000002384 93.0
BYD3_k127_4921542_14 outer membrane autotransporter barrel domain - - - 0.00000001172 63.0
BYD3_k127_4921542_2 AAA ATPase, central domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001954 454.0
BYD3_k127_4921542_3 Pyridoxal-dependent decarboxylase, pyridoxal binding domain K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008299 441.0
BYD3_k127_4921542_4 SAM-dependent methyltransferase K06969 - 2.1.1.191 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009238 439.0
BYD3_k127_4921542_5 FAD binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004149 440.0
BYD3_k127_4921542_6 Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins K13292 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002704 312.0
BYD3_k127_4921542_7 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.0000000000000000000000000000000000000000000000000000000000000000001027 237.0
BYD3_k127_4921542_8 Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis K00287,K18590 - 1.5.1.3 0.00000000000000000000000000000000000000000000000000004206 201.0
BYD3_k127_4921542_9 2OG-Fe(II) oxygenase K07394 - - 0.0000000000000000000000000000000000000000000000000001441 197.0
BYD3_k127_4928781_0 Protein tyrosine kinase K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006038 571.0
BYD3_k127_4928781_1 ECF sigma factor - - - 0.000000000000000000000000000000000000000000000000001415 188.0
BYD3_k127_4928781_2 Domain of unknown function (DUF4347) - - - 0.000000000000000000000000006193 117.0
BYD3_k127_5150835_0 The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor K00281,K00283 - 1.4.4.2 2.296e-245 765.0
BYD3_k127_5150835_1 PDZ-like domain - - - 4.418e-243 782.0
BYD3_k127_5150835_10 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000956 482.0
BYD3_k127_5150835_11 The glycine cleavage system catalyzes the degradation of glycine K00605 - 2.1.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000168 461.0
BYD3_k127_5150835_12 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005443 409.0
BYD3_k127_5150835_13 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000164 400.0
BYD3_k127_5150835_14 ABC transporter substrate-binding protein K02016 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007047 390.0
BYD3_k127_5150835_15 Belongs to the SAICAR synthetase family K01923 - 6.3.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007924 389.0
BYD3_k127_5150835_16 Belongs to the SUA5 family K07566 GO:0000049,GO:0000166,GO:0002949,GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006450,GO:0006725,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0065007,GO:0065008,GO:0070525,GO:0071704,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 2.7.7.87 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001656 362.0
BYD3_k127_5150835_17 Belongs to the ribulose-phosphate 3-epimerase family K01783 - 5.1.3.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005054 353.0
BYD3_k127_5150835_18 Ubiquinone biosynthesis hydroxylase, UbiH UbiF VisC COQ6 K03185 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001293 357.0
BYD3_k127_5150835_19 PFAM ABC transporter related K02003 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002172 342.0
BYD3_k127_5150835_2 Glycosyl hydrolase, family 20, catalytic domain - - - 9.468e-231 739.0
BYD3_k127_5150835_20 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002621 332.0
BYD3_k127_5150835_21 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005959 317.0
BYD3_k127_5150835_22 PFAM Glutathione S-transferase domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006514 306.0
BYD3_k127_5150835_23 COG0577 ABC-type antimicrobial peptide transport system, permease component K02004 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000006505 307.0
BYD3_k127_5150835_24 Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate K01807 GO:0003674,GO:0003824,GO:0004751,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006014,GO:0006081,GO:0006098,GO:0006139,GO:0006725,GO:0006732,GO:0006733,GO:0006739,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009052,GO:0009117,GO:0009987,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019362,GO:0019637,GO:0019682,GO:0019693,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046496,GO:0051156,GO:0051186,GO:0055086,GO:0071704,GO:0072524,GO:1901135,GO:1901360,GO:1901564 5.3.1.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003027 284.0
BYD3_k127_5150835_25 EamA-like transporter family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000929 287.0
BYD3_k127_5150835_26 Barrel-sandwich domain of CusB or HlyD membrane-fusion K02005 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002262 289.0
BYD3_k127_5150835_27 COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases K10914 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001377 271.0
BYD3_k127_5150835_28 Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol K03184,K18800 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008443 279.0
BYD3_k127_5150835_29 Oxygenase that introduces the hydroxyl group at carbon five of 2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol resulting in the formation of 2-nonaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4- benzoquinol K06134 - - 0.0000000000000000000000000000000000000000000000000000000000000000002734 235.0
BYD3_k127_5150835_3 PFAM glycoside hydrolase, family 10 - - - 2.76e-227 714.0
BYD3_k127_5150835_30 This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly K02871 - - 0.000000000000000000000000000000000000000000000000000000000006522 211.0
BYD3_k127_5150835_31 EVE domain - - - 0.000000000000000000000000000000000000000000000000000000002284 203.0
BYD3_k127_5150835_32 Belongs to the universal ribosomal protein uS9 family K02996 GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000000000000000000000000007536 194.0
BYD3_k127_5150835_33 Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host K05801 - - 0.00000000000000000000000000000000000000000000000001657 189.0
BYD3_k127_5150835_34 The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein K02437 - - 0.000000000000000000000000000000000000000000001113 168.0
BYD3_k127_5150835_35 Phospholipid methyltransferase - - - 0.00000000000000000000000000000000000000000002083 165.0
BYD3_k127_5150835_36 pterin-4-alpha-carbinolamine dehydratase K01724 - 4.2.1.96 0.0000000000000000000000000000000000006078 145.0
BYD3_k127_5150835_37 Recycling of diacylglycerol produced during the turnover of membrane phospholipid K00901 - 2.7.1.107 0.000000000000000000000000000000001069 134.0
BYD3_k127_5150835_38 Belongs to the UPF0149 family K09895 - - 0.0000000000000000000000000000001287 132.0
BYD3_k127_5150835_39 methyltransferase activity - - - 0.000000000000000000000000000001057 128.0
BYD3_k127_5150835_4 protein conserved in bacteria - - - 1.831e-208 663.0
BYD3_k127_5150835_40 Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division K09888 - - 0.000000000000000000008984 100.0
BYD3_k127_5150835_41 Belongs to the 5-formyltetrahydrofolate cyclo-ligase family K01934 GO:0003674,GO:0003824,GO:0006082,GO:0006575,GO:0006725,GO:0006730,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009396,GO:0009987,GO:0016053,GO:0016874,GO:0016879,GO:0016882,GO:0018130,GO:0019438,GO:0019752,GO:0022611,GO:0030272,GO:0032502,GO:0034641,GO:0035999,GO:0042398,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0046653,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.3.2 0.00000000000000000001846 100.0
BYD3_k127_5150835_42 SnoaL-like domain - - - 0.0000000000000000002056 96.0
BYD3_k127_5150835_43 integral membrane protein - - - 0.000000000000000002349 93.0
BYD3_k127_5150835_44 Acetyltransferase (GNAT) family - - - 0.000000000002317 79.0
BYD3_k127_5150835_45 methyltransferase activity - - - 0.0000000001425 75.0
BYD3_k127_5150835_46 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.000000003248 69.0
BYD3_k127_5150835_47 SlyX protein K03745 - - 0.00000002459 60.0
BYD3_k127_5150835_49 SnoaL-like polyketide cyclase - - - 0.0000008862 55.0
BYD3_k127_5150835_5 Major Facilitator Superfamily - - - 3.754e-206 651.0
BYD3_k127_5150835_50 PBS lyase HEAT domain protein repeat-containing protein - - - 0.000009741 57.0
BYD3_k127_5150835_51 regulation of fungal-type cell wall biogenesis K13730 - - 0.0000171 57.0
BYD3_k127_5150835_6 Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate K03526 - 1.17.7.1,1.17.7.3 1.215e-194 616.0
BYD3_k127_5150835_7 peptidase M24B, X-Pro dipeptidase aminopeptidase K01262 - 3.4.11.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004536 614.0
BYD3_k127_5150835_8 Glycine cleavage system P-protein K00282 - 1.4.4.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009138 597.0
BYD3_k127_5150835_9 CheY-like receiver AAA-type ATPase and DNA-binding domains - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009848 515.0
BYD3_k127_52092_0 Belongs to the peptidase S1C family K04771 - 3.4.21.107 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002882 447.0
BYD3_k127_52092_1 Fructose-bisphosphate aldolase class-I K01623 - 4.1.2.13 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001647 396.0
BYD3_k127_52092_10 Peptidoglycan-binding domain 1 protein - - - 0.00000001015 64.0
BYD3_k127_52092_11 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02469 - 5.99.1.3 0.0001202 53.0
BYD3_k127_52092_2 Beta-lactamase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003884 387.0
BYD3_k127_52092_3 Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity K06188 GO:0003674,GO:0005215,GO:0005372,GO:0005488,GO:0005515,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006833,GO:0006884,GO:0006950,GO:0006970,GO:0008150,GO:0008361,GO:0009628,GO:0009987,GO:0009992,GO:0015250,GO:0015267,GO:0015318,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022838,GO:0022857,GO:0030104,GO:0031224,GO:0031226,GO:0032535,GO:0042044,GO:0042592,GO:0042802,GO:0044425,GO:0044459,GO:0044464,GO:0048878,GO:0050896,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0071944,GO:0090066 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004473 303.0
BYD3_k127_52092_4 Integrin alpha (beta-propellor repeats). - - - 0.00000000000000000000000000000000000000000000000000000000000008604 234.0
BYD3_k127_52092_5 Domain of unknown function (DUF5122) beta-propeller - - - 0.000000000000000000000000000000000000000002827 179.0
BYD3_k127_52092_6 Protein of unknown function, DUF481 K07283 - - 0.0000000000000000000000000000000000009524 148.0
BYD3_k127_52092_7 HNH endonuclease - - - 0.00000000000000000000000000000000001506 145.0
BYD3_k127_52092_8 - - - - 0.0000000000000001438 86.0
BYD3_k127_52092_9 - - - - 0.00000000000003024 85.0
BYD3_k127_5312787_0 Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties K00688 - 2.4.1.1 0.0 1247.0
BYD3_k127_5312787_1 PFAM Aldehyde oxidase xanthine dehydrogenase, molybdopterin binding K07303 - 1.3.99.16 0.0 1073.0
BYD3_k127_5312787_10 Involved in the aerobic and anaerobic degradation of long-chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate K07516 - 1.1.1.35 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006205 614.0
BYD3_k127_5312787_11 PFAM oxidoreductase domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001586 573.0
BYD3_k127_5312787_12 GAF domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006731 565.0
BYD3_k127_5312787_13 TIGRFAM 4-hydroxybenzoate 3-monooxygenase K00481 GO:0000166,GO:0003674,GO:0003824,GO:0004497,GO:0005488,GO:0008150,GO:0008152,GO:0016491,GO:0016705,GO:0016709,GO:0018659,GO:0036094,GO:0043167,GO:0043168,GO:0048037,GO:0050660,GO:0050662,GO:0055114,GO:0071949,GO:0097159,GO:1901265,GO:1901363 1.14.13.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001226 537.0
BYD3_k127_5312787_14 Cellulose binding domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004679 590.0
BYD3_k127_5312787_15 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002107 507.0
BYD3_k127_5312787_16 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K00666 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 500.0
BYD3_k127_5312787_17 PFAM Aminotransferase class I and II K00812 - 2.6.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000693 487.0
BYD3_k127_5312787_18 carboxylic acid catabolic process - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003105 490.0
BYD3_k127_5312787_19 Oxidoreductase family, NAD-binding Rossmann fold K10219 - 1.1.1.312 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004811 472.0
BYD3_k127_5312787_2 damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage K03702 - - 1.153e-317 984.0
BYD3_k127_5312787_20 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004202 460.0
BYD3_k127_5312787_21 Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily K01889 GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001314 454.0
BYD3_k127_5312787_22 COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL CutL homologs K07303 - 1.3.99.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000688 456.0
BYD3_k127_5312787_23 membrane K07278 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001706 433.0
BYD3_k127_5312787_24 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007262 430.0
BYD3_k127_5312787_25 Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006709 416.0
BYD3_k127_5312787_26 two-component system sensor protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004718 410.0
BYD3_k127_5312787_27 domain protein K04618 - 1.1.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004449 419.0
BYD3_k127_5312787_28 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008707 375.0
BYD3_k127_5312787_29 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 373.0
BYD3_k127_5312787_3 TonB dependent receptor K02014 - - 6.638e-304 950.0
BYD3_k127_5312787_30 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004015 365.0
BYD3_k127_5312787_31 With MotB forms the ion channels that couple flagellar rotation to proton sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine K02556 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001836 353.0
BYD3_k127_5312787_32 Aldolase/RraA - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009182 346.0
BYD3_k127_5312787_33 Flagellar motor protein K02557 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001521 348.0
BYD3_k127_5312787_34 Belongs to the short-chain dehydrogenases reductases (SDR) family K07124 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005424 339.0
BYD3_k127_5312787_35 lysine 2,3-aminomutase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 339.0
BYD3_k127_5312787_36 Metallo-beta-lactamase superfamily K17837 - 3.5.2.6 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006606 314.0
BYD3_k127_5312787_37 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002205 313.0
BYD3_k127_5312787_38 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001118 305.0
BYD3_k127_5312787_39 Protein of unknown function (DUF3300) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001994 310.0
BYD3_k127_5312787_4 Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) K01868 - 6.1.1.3 4.307e-286 891.0
BYD3_k127_5312787_40 Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides K02003 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003687 306.0
BYD3_k127_5312787_41 Protein of unknown function (DUF2950) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001466 289.0
BYD3_k127_5312787_42 Peptidase family M23 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002672 283.0
BYD3_k127_5312787_43 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000001053 268.0
BYD3_k127_5312787_44 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000007277 272.0
BYD3_k127_5312787_45 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000005548 257.0
BYD3_k127_5312787_46 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000003664 240.0
BYD3_k127_5312787_47 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000008026 235.0
BYD3_k127_5312787_48 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins K02520 - - 0.0000000000000000000000000000000000000000000000000000000000000000007713 231.0
BYD3_k127_5312787_49 COG2080 Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS CutS homologs K07302 - 1.3.99.16 0.000000000000000000000000000000000000000000000000000000000000000001899 230.0
BYD3_k127_5312787_5 Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily K01890 - 6.1.1.20 2.998e-226 726.0
BYD3_k127_5312787_50 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily K07032 - - 0.00000000000000000000000000000000000000000000000000000000000004984 216.0
BYD3_k127_5312787_51 PFAM regulatory protein, MerR - - - 0.0000000000000000000000000000000000000000000000000000000000847 205.0
BYD3_k127_5312787_52 acetyltransferase - - - 0.00000000000000000000000000000000000000000000000000000002055 211.0
BYD3_k127_5312787_53 Bacterial transferase hexapeptide (six repeats) K00640 - 2.3.1.30 0.000000000000000000000000000000000000000000000000003439 188.0
BYD3_k127_5312787_54 Histidine kinase-like ATPases - - - 0.000000000000000000000000000000000000000000000000008114 195.0
BYD3_k127_5312787_55 Fibronectin type 3 domain - - - 0.0000000000000000000000000000000000000000000000001302 206.0
BYD3_k127_5312787_56 Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit K02887 - - 0.00000000000000000000000000000000000000000000001378 173.0
BYD3_k127_5312787_57 metallopeptidase activity K01179 - 3.2.1.4 0.00000000000000000000000000000000000000000000001822 199.0
BYD3_k127_5312787_58 Low affinity iron permease - - - 0.0000000000000000000000000000000000000000000004724 170.0
BYD3_k127_5312787_59 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K04764 GO:0000976,GO:0001067,GO:0001130,GO:0001216,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0032774,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051173,GO:0051252,GO:0051253,GO:0051254,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990837,GO:2000112,GO:2000113,GO:2001141 - 0.00000000000000000000000000000000000000000001236 164.0
BYD3_k127_5312787_6 ATP dependent DNA ligase C terminal region K01971 - 6.5.1.1 1.419e-210 683.0
BYD3_k127_5312787_60 Domain of unknown function (DUF1932) - - - 0.00000000000000000000000000000000000000004635 164.0
BYD3_k127_5312787_61 Protein of unknown function (DUF2892) - - - 0.000000000000000000000000000000000000006765 150.0
BYD3_k127_5312787_62 PFAM regulatory protein MarR - - - 0.00000000000000000000000000000000000005959 148.0
BYD3_k127_5312787_63 - - - - 0.000000000000000000000000000000002018 138.0
BYD3_k127_5312787_64 Heavy-metal-associated domain - - - 0.000000000000000000000000009131 119.0
BYD3_k127_5312787_66 alginic acid biosynthetic process - - - 0.0000000000000000004225 105.0
BYD3_k127_5312787_67 Sh3 type 3 domain protein - - - 0.00000000000000002863 85.0
BYD3_k127_5312787_69 beta-galactosidase K01190 - 3.2.1.23 0.000000001888 73.0
BYD3_k127_5312787_7 epoxide hydrolase K01253,K21159 - 3.3.2.9 1.346e-202 636.0
BYD3_k127_5312787_70 Belongs to the bacterial ribosomal protein bL35 family K02916 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - 0.00000002043 58.0
BYD3_k127_5312787_72 Aldo/keto reductase family - - - 0.0009165 42.0
BYD3_k127_5312787_8 Pathogenicity protein K09800 - - 3.499e-195 651.0
BYD3_k127_5312787_9 Sodium:solute symporter family K03307 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003855 607.0
BYD3_k127_5330805_0 ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner K06942 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003143 543.0
BYD3_k127_5330805_1 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 511.0
BYD3_k127_5330805_10 This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance K02897 GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008097,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000000000000000000000000000002179 209.0
BYD3_k127_5330805_11 Tetratricopeptide repeat - - - 0.00000000000000000000000000000000000000000000000000000004211 218.0
BYD3_k127_5330805_12 conserved protein (some members contain a von Willebrand factor type A (vWA) domain) - - - 0.000000000000000000000000000000000000000000000000007315 197.0
BYD3_k127_5330805_13 - - - - 0.00000000000000000000000000000000000000000000003834 189.0
BYD3_k127_5330805_14 - - - - 0.00000000000000000000000000000000000000000000004096 177.0
BYD3_k127_5330805_17 membrane protein domain - - - 0.0000000000000000000000000004883 132.0
BYD3_k127_5330805_18 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000007896 119.0
BYD3_k127_5330805_19 Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein K02494 GO:0003674,GO:0005488,GO:0005575,GO:0005623,GO:0006807,GO:0008104,GO:0008150,GO:0008152,GO:0008289,GO:0009279,GO:0010876,GO:0016020,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033036,GO:0033218,GO:0034613,GO:0042157,GO:0042277,GO:0043170,GO:0044238,GO:0044462,GO:0044464,GO:0044872,GO:0044873,GO:0044874,GO:0051179,GO:0051641,GO:0051668,GO:0070727,GO:0071704,GO:0071723,GO:0071944,GO:0072657,GO:1901564 - 0.00000000000000000000039 104.0
BYD3_k127_5330805_2 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 - 2.7.6.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006234 468.0
BYD3_k127_5330805_20 Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) K00948 GO:0000287,GO:0003674,GO:0003824,GO:0004749,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006015,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0016740,GO:0016772,GO:0016778,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042301,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046390,GO:0046391,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.6.1 0.0000006789 51.0
BYD3_k127_5330805_21 Belongs to the SEDS family - - - 0.0001166 53.0
BYD3_k127_5330805_3 Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA K02835 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005331 468.0
BYD3_k127_5330805_4 Beta-lactamase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003655 354.0
BYD3_k127_5330805_5 ZIP Zinc transporter K07238 GO:0000041,GO:0003674,GO:0005215,GO:0005381,GO:0005384,GO:0005385,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006824,GO:0006826,GO:0006828,GO:0006829,GO:0008150,GO:0008324,GO:0015075,GO:0015086,GO:0015087,GO:0015093,GO:0015318,GO:0015684,GO:0015691,GO:0016020,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0034755,GO:0044464,GO:0046873,GO:0046915,GO:0051179,GO:0051234,GO:0055085,GO:0070574,GO:0070838,GO:0071421,GO:0071577,GO:0071944,GO:0072509,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:1903874 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003218 338.0
BYD3_k127_5330805_6 Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol K00919 - 2.7.1.148 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005689 327.0
BYD3_k127_5330805_7 associated with various cellular activities K03924 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001266 296.0
BYD3_k127_5330805_8 The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis K01056 - 3.1.1.29 0.00000000000000000000000000000000000000000000000000000000000003534 220.0
BYD3_k127_5330805_9 Membrane - - - 0.0000000000000000000000000000000000000000000000000000000005321 228.0
BYD3_k127_5344539_0 LacY proton/sugar symporter K05820 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001615 583.0
BYD3_k127_5344539_1 amine dehydrogenase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004453 486.0
BYD3_k127_5344539_11 Protein of unknown function (DUF4019) - - - 0.0000007908 60.0
BYD3_k127_5344539_2 conserved protein, contains double-stranded beta-helix domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000008078 263.0
BYD3_k127_5344539_3 Tryptophan-rich sensory protein K05770 - - 0.000000000000000000000000000000000000000000000000000000000005039 213.0
BYD3_k127_5344539_4 Uncharacterized protein conserved in bacteria (DUF2200) - - - 0.000000000000000000000000000000000000000000000000006298 184.0
BYD3_k127_5344539_5 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000002395 181.0
BYD3_k127_5344539_6 Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A K12267 - 1.8.4.11,1.8.4.12 0.00000000000000000000000000000000002473 144.0
BYD3_k127_5344539_7 protein TIM barrel - - - 0.000000000000000000000000001184 127.0
BYD3_k127_5344539_8 Protein of unknown function (DUF2938) - - - 0.00000000000000007657 83.0
BYD3_k127_5344539_9 - - - - 0.00000000000003941 74.0
BYD3_k127_5349057_0 Pfam:KaiC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001045 573.0
BYD3_k127_5349057_1 PhoQ Sensor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007891 296.0
BYD3_k127_5349057_2 KaiB K08481 - - 0.00000000000000000000000000000000000003889 149.0
BYD3_k127_5349057_3 lysine biosynthetic process via aminoadipic acid - - - 0.0000000000000000000000000000000002241 134.0
BYD3_k127_5349057_4 photoreceptor activity K08481 - - 0.000000000000000000000001919 109.0
BYD3_k127_5349302_0 DNA ligase K01971 - 6.5.1.1 0.0 1024.0
BYD3_k127_5349302_1 Hypothetical glycosyl hydrolase 6 - - - 2.065e-307 963.0
BYD3_k127_5349302_10 Cytochrome c - - - 3.398e-235 758.0
BYD3_k127_5349302_100 Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME) - - - 0.0000000000000000000000000001894 126.0
BYD3_k127_5349302_101 Acetyltransferase (GNAT) domain - - - 0.0000000000000000000000000002055 121.0
BYD3_k127_5349302_102 Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA K07447 GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - 0.000000000000000000000000004534 117.0
BYD3_k127_5349302_103 Endonuclease/Exonuclease/phosphatase family - - - 0.00000000000000000000000004911 121.0
BYD3_k127_5349302_104 Belongs to the bacterial histone-like protein family - - - 0.00000000000000000000000005882 114.0
BYD3_k127_5349302_105 DNA-templated transcription, initiation K03088 - - 0.000000000000000000000004073 108.0
BYD3_k127_5349302_106 DNA-templated transcription, initiation - - - 0.0000000000000000000001099 111.0
BYD3_k127_5349302_107 TIGRFAM TonB K03832 - - 0.0000000000000000000003146 108.0
BYD3_k127_5349302_108 ADP binding - - - 0.00000000000000000001449 106.0
BYD3_k127_5349302_11 TonB dependent receptor K02014 - - 2.812e-228 733.0
BYD3_k127_5349302_110 Tetratricopeptide repeat - - - 0.0000000000000000004244 97.0
BYD3_k127_5349302_111 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane - - - 0.000000000000000002146 101.0
BYD3_k127_5349302_112 ChrR Cupin-like domain - - - 0.00000000000003831 81.0
BYD3_k127_5349302_113 - - - - 0.0000000000002027 79.0
BYD3_k127_5349302_114 WD domain, G-beta repeat - - - 0.000000001904 71.0
BYD3_k127_5349302_115 - - - - 0.000000001998 65.0
BYD3_k127_5349302_116 - - - - 0.000000009525 68.0
BYD3_k127_5349302_117 Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions K04077 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0006950,GO:0008144,GO:0008150,GO:0009266,GO:0009314,GO:0009405,GO:0009408,GO:0009628,GO:0009987,GO:0016032,GO:0016462,GO:0016465,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019058,GO:0019068,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0035639,GO:0035821,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0044183,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051704,GO:0051817,GO:0052047,GO:0052212,GO:0061077,GO:0097159,GO:0097367,GO:0101031,GO:1901265,GO:1901363,GO:1990220 - 0.00000002416 63.0
BYD3_k127_5349302_118 ChrR Cupin-like domain - - - 0.00000003819 63.0
BYD3_k127_5349302_119 - - - - 0.0000002767 63.0
BYD3_k127_5349302_12 Alkaline phosphatase K01113 - 3.1.3.1 2.786e-223 711.0
BYD3_k127_5349302_121 - - - - 0.00004625 55.0
BYD3_k127_5349302_122 helix_turn_helix, Lux Regulon - - - 0.0004719 48.0
BYD3_k127_5349302_123 SMART Integrin alpha beta-propellor repeat protein - - - 0.0008342 52.0
BYD3_k127_5349302_13 TonB dependent receptor K02014 - - 5.666e-217 713.0
BYD3_k127_5349302_14 amino acid K03294 - - 1.848e-198 629.0
BYD3_k127_5349302_15 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001664 627.0
BYD3_k127_5349302_16 Domain of unknown function (DUF4478) K06966 - 3.2.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002252 612.0
BYD3_k127_5349302_17 Tryptophan halogenase K14266 - 1.14.19.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002947 593.0
BYD3_k127_5349302_18 PFAM Type II secretion system protein E K02669 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000322 566.0
BYD3_k127_5349302_19 Belongs to the RtcB family K14415 GO:0003674,GO:0003824,GO:0003909,GO:0005488,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006396,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008452,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016886,GO:0030145,GO:0033554,GO:0034641,GO:0042245,GO:0043167,GO:0043169,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0046872,GO:0046914,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:0140098,GO:1901360 6.5.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005526 559.0
BYD3_k127_5349302_2 Belongs to the type-B carboxylesterase lipase family K03929 - - 4.164e-287 903.0
BYD3_k127_5349302_20 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000564 563.0
BYD3_k127_5349302_21 twitching motility protein K02670 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 546.0
BYD3_k127_5349302_22 short chain dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002753 554.0
BYD3_k127_5349302_23 Lysin motif K08307 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001591 551.0
BYD3_k127_5349302_24 RESPONSE REGULATOR receiver - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007051 525.0
BYD3_k127_5349302_25 phosphoesterase, PA-phosphatase related - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005779 512.0
BYD3_k127_5349302_26 Adenylate cyclase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006997 497.0
BYD3_k127_5349302_27 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004346 496.0
BYD3_k127_5349302_28 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001875 454.0
BYD3_k127_5349302_29 Tetratricopeptide TPR_2 repeat protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006028 478.0
BYD3_k127_5349302_3 Aminotransferase class-III K01845 - 5.4.3.8 8.433e-255 798.0
BYD3_k127_5349302_30 twitching motility protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002915 434.0
BYD3_k127_5349302_31 Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family K03308 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003797 437.0
BYD3_k127_5349302_32 enterobactin catabolic process K07214 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001831 424.0
BYD3_k127_5349302_33 Peptidase dimerisation domain K13049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002277 427.0
BYD3_k127_5349302_34 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain K07638 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002449 426.0
BYD3_k127_5349302_35 helix_turn_helix gluconate operon transcriptional repressor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002061 417.0
BYD3_k127_5349302_36 PFAM Glycosyl transferase, group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001608 406.0
BYD3_k127_5349302_37 Bacterial protein of unknown function (DUF899) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002374 397.0
BYD3_k127_5349302_38 Oxidoreductase FAD-binding domain K02823 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002671 390.0
BYD3_k127_5349302_39 Belongs to the prokaryotic GSH synthase family K01920 - 6.3.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005228 386.0
BYD3_k127_5349302_4 PFAM Tannase and feruloyl esterase K21105 - 3.1.1.102 1.228e-253 794.0
BYD3_k127_5349302_40 Beta-lactamase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005801 377.0
BYD3_k127_5349302_41 Transcriptional regulatory protein, C terminal K07659 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007827 374.0
BYD3_k127_5349302_42 Type IV pili methyl-accepting chemotaxis transducer N-term K02660 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001014 378.0
BYD3_k127_5349302_43 Periplasmic binding protein domain K02058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004755 362.0
BYD3_k127_5349302_44 Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) K01613 - 4.1.1.65 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001864 355.0
BYD3_k127_5349302_45 Glucose / Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008015 366.0
BYD3_k127_5349302_46 Dienelactone hydrolase K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006816 342.0
BYD3_k127_5349302_47 PQQ-like domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002043 333.0
BYD3_k127_5349302_48 Membrane protease subunits, stomatin prohibitin homologs - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002174 344.0
BYD3_k127_5349302_49 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain K00609 - 2.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005829 328.0
BYD3_k127_5349302_5 Transporter K03305 - - 2.268e-246 770.0
BYD3_k127_5349302_50 With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD K10979 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 316.0
BYD3_k127_5349302_51 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009167 297.0
BYD3_k127_5349302_52 translation initiation factor activity K02487,K06596 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000006751 309.0
BYD3_k127_5349302_53 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004002 301.0
BYD3_k127_5349302_54 hydrolase of the alpha beta-hydrolase fold K07020 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000008034 283.0
BYD3_k127_5349302_55 Pfam:Pyridox_oxidase K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007322 276.0
BYD3_k127_5349302_56 Protein of unknown function (DUF1684) K09164 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001148 280.0
BYD3_k127_5349302_57 extensin - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001161 271.0
BYD3_k127_5349302_58 PAS domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000988 275.0
BYD3_k127_5349302_59 Family of unknown function (DUF1028) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001848 281.0
BYD3_k127_5349302_6 xanthine dehydrogenase activity K07303 - 1.3.99.16 1.986e-242 771.0
BYD3_k127_5349302_60 Signal transduction protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004919 266.0
BYD3_k127_5349302_61 involved in chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000002936 258.0
BYD3_k127_5349302_62 signal peptide protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000008282 259.0
BYD3_k127_5349302_63 ketosteroid isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001416 256.0
BYD3_k127_5349302_64 COG0662 Mannose-6-phosphate isomerase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001455 246.0
BYD3_k127_5349302_65 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000001247 251.0
BYD3_k127_5349302_66 COG3209 Rhs family protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001802 258.0
BYD3_k127_5349302_67 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000004125 239.0
BYD3_k127_5349302_68 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 - - 0.000000000000000000000000000000000000000000000000000000000000000000005017 241.0
BYD3_k127_5349302_69 Belongs to the UPF0301 (AlgH) family K07735 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 - 0.000000000000000000000000000000000000000000000000000000000000000002353 231.0
BYD3_k127_5349302_7 Tetratricopeptide repeat - - - 1.497e-241 759.0
BYD3_k127_5349302_70 Las17-binding protein actin regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000001057 229.0
BYD3_k127_5349302_71 Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline K00286 - 1.5.1.2 0.0000000000000000000000000000000000000000000000000000000000000005266 235.0
BYD3_k127_5349302_72 Predicted metal-binding integral membrane protein (DUF2182) - - - 0.0000000000000000000000000000000000000000000000000000000000000006369 228.0
BYD3_k127_5349302_73 [2Fe-2S] binding domain K07302 - 1.3.99.16 0.0000000000000000000000000000000000000000000000000000000000003839 218.0
BYD3_k127_5349302_74 diguanylate cyclase K21019 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000553 219.0
BYD3_k127_5349302_75 response regulator K02657 - - 0.0000000000000000000000000000000000000000000000000000000001527 207.0
BYD3_k127_5349302_76 X-Pro dipeptidyl-peptidase (S15 family) K07018 - - 0.000000000000000000000000000000000000000000000000000001038 200.0
BYD3_k127_5349302_77 Alkaline phosphatase - - - 0.000000000000000000000000000000000000000000000000000006011 207.0
BYD3_k127_5349302_78 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000003735 192.0
BYD3_k127_5349302_79 - - - - 0.000000000000000000000000000000000000000000000000000333 190.0
BYD3_k127_5349302_8 Molecular chaperone. Has ATPase activity K04079 - - 6.817e-241 760.0
BYD3_k127_5349302_80 FKBP-type peptidyl-prolyl cis-trans isomerase K01802,K03772 - 5.2.1.8 0.000000000000000000000000000000000000000000000001165 178.0
BYD3_k127_5349302_81 YHS domain protein - - - 0.00000000000000000000000000000000000000000000003537 174.0
BYD3_k127_5349302_82 Signal transduction protein - - - 0.00000000000000000000000000000000000000000000004425 183.0
BYD3_k127_5349302_83 Glutathione-dependent formaldehyde-activating enzyme - - - 0.0000000000000000000000000000000000000000000001022 171.0
BYD3_k127_5349302_84 methyltransferase - - - 0.000000000000000000000000000000000000000000001846 178.0
BYD3_k127_5349302_85 lipolytic protein G-D-S-L family - - - 0.0000000000000000000000000000000000000000002066 169.0
BYD3_k127_5349302_86 protein conserved in bacteria - - - 0.0000000000000000000000000000000000000000009578 162.0
BYD3_k127_5349302_87 cheY-homologous receiver domain K02658 - - 0.00000000000000000000000000000000000000000223 163.0
BYD3_k127_5349302_88 SnoaL-like domain - - - 0.000000000000000000000000000000000000000002231 162.0
BYD3_k127_5349302_89 - - - - 0.00000000000000000000000000000000000000003473 162.0
BYD3_k127_5349302_9 Glycosyl hydrolases family 39 - - - 7.396e-241 756.0
BYD3_k127_5349302_90 - - - - 0.0000000000000000000000000000000000000009644 164.0
BYD3_k127_5349302_92 endoribonuclease L-PSP - - - 0.0000000000000000000000000000000000002166 152.0
BYD3_k127_5349302_93 Cysteine-rich secretory protein family - - - 0.0000000000000000000000000000000000003958 146.0
BYD3_k127_5349302_94 - - - - 0.000000000000000000000000000000000007691 149.0
BYD3_k127_5349302_95 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000009999 146.0
BYD3_k127_5349302_96 lactoylglutathione lyase activity - - - 0.0000000000000000000000000000000009929 139.0
BYD3_k127_5349302_97 Two component signalling adaptor domain K02659 - - 0.000000000000000000000000000000003001 139.0
BYD3_k127_5349302_98 integral membrane protein K02221 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000002785 129.0
BYD3_k127_5349302_99 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000005831 133.0
BYD3_k127_5365630_0 receptor - - - 1.783e-281 887.0
BYD3_k127_5365630_1 COG0457 FOG TPR repeat - - - 4.464e-258 833.0
BYD3_k127_5365630_10 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000003323 254.0
BYD3_k127_5365630_11 Bacterial transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000004933 243.0
BYD3_k127_5365630_12 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.00000000000000000000000000000000000000000000000000000000001168 211.0
BYD3_k127_5365630_13 glyoxalase bleomycin resistance protein dioxygenase K07032 - - 0.000000000000000000000000000000000000000000000000000006615 192.0
BYD3_k127_5365630_14 YCII-related domain - - - 0.00000000000000000000000000000000000000000000002011 173.0
BYD3_k127_5365630_15 HDOD domain - - - 0.000000000000000000000000000000000001949 150.0
BYD3_k127_5365630_16 arsR family - - - 0.000000000000000000000000000000000005485 143.0
BYD3_k127_5365630_18 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00003455 55.0
BYD3_k127_5365630_2 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009556 591.0
BYD3_k127_5365630_3 Acetylornithine deacetylase Succinyl-diaminopimelate - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002925 548.0
BYD3_k127_5365630_4 Belongs to the sigma-70 factor family K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009221 522.0
BYD3_k127_5365630_5 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 527.0
BYD3_k127_5365630_6 Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation K00322 - 1.6.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001112 472.0
BYD3_k127_5365630_7 iron ion homeostasis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004806 404.0
BYD3_k127_5365630_8 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 366.0
BYD3_k127_5365630_9 Protein of unknown function (DUF1348) K09958 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000002005 284.0
BYD3_k127_5367032_0 Cytochrome c - - - 0.0 1083.0
BYD3_k127_5367032_1 Belongs to the glycosyl hydrolase 43 family - - - 5.022e-291 906.0
BYD3_k127_5367032_10 Biotin-lipoyl like K02005 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 474.0
BYD3_k127_5367032_11 TonB dependent receptor - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005323 464.0
BYD3_k127_5367032_12 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003172 368.0
BYD3_k127_5367032_13 NADH:flavin oxidoreductase / NADH oxidase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004419 377.0
BYD3_k127_5367032_14 ATPases associated with a variety of cellular activities K02003 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000113 340.0
BYD3_k127_5367032_15 Tannase and feruloyl esterase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002094 334.0
BYD3_k127_5367032_16 Major facilitator superfamily K05819 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002969 317.0
BYD3_k127_5367032_17 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002105 299.0
BYD3_k127_5367032_18 Fumarylacetoacetate (FAA) hydrolase family K16165 - 3.7.1.20 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003453 295.0
BYD3_k127_5367032_19 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003472 299.0
BYD3_k127_5367032_2 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 1.686e-202 636.0
BYD3_k127_5367032_20 LytTr DNA-binding domain K02477 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000574 282.0
BYD3_k127_5367032_21 dehydratase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000001118 265.0
BYD3_k127_5367032_22 Glutathione S-transferase, C-terminal domain K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001727 256.0
BYD3_k127_5367032_23 PFAM phosphoesterase, PA-phosphatase related K19302 - 3.6.1.27 0.000000000000000000000000000000000000000000000000000000000000000000000002575 255.0
BYD3_k127_5367032_24 ChrR Cupin-like domain - - - 0.00000000000000000000000000000000000000000000000000000000002834 207.0
BYD3_k127_5367032_25 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000001193 191.0
BYD3_k127_5367032_27 transcriptional regulator - - - 0.00000000000000000000000000000000000001113 155.0
BYD3_k127_5367032_28 SnoaL-like domain - - - 0.00000000000000000000000000000000000001279 158.0
BYD3_k127_5367032_29 Transcriptional regulator - - - 0.00000000000000000000000000000000000002121 162.0
BYD3_k127_5367032_3 FAD binding domain - - - 2.143e-202 646.0
BYD3_k127_5367032_30 - - - - 0.0000000000000000000000000000000000003334 150.0
BYD3_k127_5367032_31 Rubredoxin-like zinc ribbon domain (DUF35_N) K07068 - - 0.000000000000000000000000000000000009149 139.0
BYD3_k127_5367032_32 - - - - 0.0000000000000000000000000000000444 135.0
BYD3_k127_5367032_33 SnoaL-like domain - - - 0.00000000000000000000000000000004561 133.0
BYD3_k127_5367032_34 - - - - 0.00000000000000000000000000000004945 136.0
BYD3_k127_5367032_35 PFAM NIPSNAP family containing protein - - - 0.00000000000000000000000001979 111.0
BYD3_k127_5367032_36 serine-type endopeptidase activity K04771,K07126 - 3.4.21.107 0.000000000000000000001133 104.0
BYD3_k127_5367032_38 Putative adhesin - - - 0.0000000000000048 78.0
BYD3_k127_5367032_39 SnoaL-like domain - - - 0.0001117 54.0
BYD3_k127_5367032_4 long-chain fatty acid transporting porin activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002115 606.0
BYD3_k127_5367032_5 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002435 601.0
BYD3_k127_5367032_6 MacB-like periplasmic core domain K02004 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000022 581.0
BYD3_k127_5367032_7 Dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001134 544.0
BYD3_k127_5367032_8 Rieske-like [2Fe-2S] domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002162 535.0
BYD3_k127_5367032_9 AMP-binding enzyme C-terminal domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 515.0
BYD3_k127_5371146_0 receptor - - - 0.0 1302.0
BYD3_k127_5371146_1 Mandelate racemase muconate lactonizing enzyme K08323 GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005975,GO:0008150,GO:0008152,GO:0008927,GO:0009056,GO:0016052,GO:0016829,GO:0016835,GO:0016836,GO:0043167,GO:0043169,GO:0044238,GO:0046872,GO:0071704,GO:1901575 4.2.1.8 1.483e-233 726.0
BYD3_k127_5371146_2 pfkB family carbohydrate kinase K00874 - 2.7.1.45 8.582e-229 709.0
BYD3_k127_5371146_3 glucuronate isomerase K01812 - 5.3.1.12 2.947e-220 691.0
BYD3_k127_5371146_4 Aldolase K01625 - 4.1.2.14,4.1.3.42 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003807 401.0
BYD3_k127_5371146_5 GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004983 430.0
BYD3_k127_5371146_6 Major facilitator superfamily K08191 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001735 404.0
BYD3_k127_5371146_7 FCD - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003211 290.0
BYD3_k127_5373980_0 Oxidizes proline to glutamate for use as a carbon and nitrogen source K13821 - 1.2.1.88,1.5.5.2 0.0 1124.0
BYD3_k127_5373980_1 COG1680 Beta-lactamase class C and other penicillin binding proteins - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004051 529.0
BYD3_k127_5373980_10 NifU-like N terminal domain K04488 - - 0.0000000000000000000000000000000000000000000002681 175.0
BYD3_k127_5373980_11 FeS assembly protein SufD K09015 - - 0.0000000000000000000000000000000000000000000004602 183.0
BYD3_k127_5373980_12 Belongs to the HSP15 family K04762 - - 0.0000000000000000000000000004854 119.0
BYD3_k127_5373980_13 Rieske 2Fe-2S K05710 - - 0.000000000000000000000005083 105.0
BYD3_k127_5373980_14 Histidine phosphatase superfamily (branch 1) K08296 - - 0.000000000000000000176 95.0
BYD3_k127_5373980_2 Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine K11717 - 2.8.1.7,4.4.1.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001726 529.0
BYD3_k127_5373980_3 Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA K00639 - 2.3.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001044 410.0
BYD3_k127_5373980_4 Uncharacterized protein family (UPF0051) K09014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014 392.0
BYD3_k127_5373980_5 FeS assembly ATPase SufC K09013 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0008150,GO:0008152,GO:0009314,GO:0009628,GO:0009987,GO:0016043,GO:0016226,GO:0022607,GO:0031163,GO:0044085,GO:0044237,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:0051186,GO:0071840 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009293 364.0
BYD3_k127_5373980_6 Involved in the import of queuosine (Q) precursors, required for Q precursor salvage K09125 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003976 349.0
BYD3_k127_5373980_7 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002779 267.0
BYD3_k127_5373980_8 FeS assembly SUF system protein SufT - - - 0.00000000000000000000000000000000000000000000000000000000000000000000005195 252.0
BYD3_k127_5373980_9 Tetratricopeptide repeat K05838 - - 0.00000000000000000000000000000000000000000000001305 181.0
BYD3_k127_5396841_0 Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system K01736 GO:0000166,GO:0003674,GO:0003824,GO:0004107,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0010181,GO:0016053,GO:0016829,GO:0016835,GO:0016838,GO:0019438,GO:0019752,GO:0032553,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0048037,GO:0050662,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 4.2.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007377 557.0
BYD3_k127_5396841_1 Elongation factor P--(R)-beta-lysine ligase K04568 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003091 323.0
BYD3_k127_5396841_10 FimV C-terminal K08086 - - 0.00000000000000000000000000000000004886 142.0
BYD3_k127_5396841_11 Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate K00133 GO:0000096,GO:0000097,GO:0003674,GO:0003824,GO:0004073,GO:0006082,GO:0006520,GO:0006549,GO:0006553,GO:0006555,GO:0006566,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009066,GO:0009067,GO:0009081,GO:0009082,GO:0009085,GO:0009086,GO:0009088,GO:0009089,GO:0009097,GO:0009987,GO:0016053,GO:0016491,GO:0016620,GO:0016903,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044272,GO:0044281,GO:0044283,GO:0046394,GO:0046451,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.2.1.11 0.0009869 44.0
BYD3_k127_5396841_2 Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue K07320 - 2.1.1.298 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000106 308.0
BYD3_k127_5396841_3 cyclic-guanylate-specific phosphodiesterase activity K21025 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000004624 316.0
BYD3_k127_5396841_4 Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Prokaryotic type I sub-subfamily K01613 - 4.1.1.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000003371 295.0
BYD3_k127_5396841_5 Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation K02356 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001916 282.0
BYD3_k127_5396841_6 GAF domain K08968 - 1.8.4.14 0.00000000000000000000000000000000000000000000000000000000003126 213.0
BYD3_k127_5396841_7 threonine efflux protein - - - 0.000000000000000000000000000000000000000000000000001693 192.0
BYD3_k127_5396841_8 SCO1/SenC K07152 - - 0.000000000000000000000000000000000002207 145.0
BYD3_k127_5396841_9 acetylesterase activity - - - 0.00000000000000000000000000000000002185 154.0
BYD3_k127_5540975_0 Catalyzes the NAD( )-dependent oxidation of L-threonine to 2-amino-3-ketobutyrate K00060 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006563,GO:0006564,GO:0006566,GO:0006567,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0008270,GO:0008652,GO:0008743,GO:0009056,GO:0009058,GO:0009063,GO:0009066,GO:0009068,GO:0009069,GO:0009070,GO:0009987,GO:0016053,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0030145,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046395,GO:0046870,GO:0046872,GO:0046914,GO:0055114,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 1.1.1.103 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001568 571.0
BYD3_k127_5540975_1 it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins K02314 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004747 539.0
BYD3_k127_5540975_10 Specifically methylates the ribose of guanosine 2251 in 23S rRNA K03218 GO:0000154,GO:0000451,GO:0000453,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008171,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070039,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.185 0.0000000000000000000000000000000000000000000000000000000000000000000000000001337 264.0
BYD3_k127_5540975_11 (FHA) domain - - - 0.00000000000000000000000000000000000000000000000000000000000001486 222.0
BYD3_k127_5540975_12 Catalyzes the decarboxylative condensation of pimeloyl- acyl-carrier protein and L-alanine to produce 8-amino-7- oxononanoate (AON), acyl-carrier protein , and carbon dioxide K00639,K00652 - 2.3.1.29,2.3.1.47 0.00000000000000000000000000000000000000000000000000000001205 200.0
BYD3_k127_5540975_13 This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site K02884 - - 0.00000000000000000000000000000000000000000000000004171 181.0
BYD3_k127_5540975_14 Binds to the 23S rRNA K02939 GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000000000000000000000000000000000009006 181.0
BYD3_k127_5540975_15 Binds together with S18 to 16S ribosomal RNA K02990 - - 0.0000000000000000000000000000000000000000000000002283 181.0
BYD3_k127_5540975_16 An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes K02860 GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0022607,GO:0022613,GO:0022618,GO:0030490,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:1901360 - 0.00000000000000000000000000000000029 138.0
BYD3_k127_5540975_17 Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit K02963 GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0019843,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0048027,GO:0070181,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.000000000000000000000000000000002659 130.0
BYD3_k127_5540975_18 Belongs to the bacterial ribosomal protein bS16 family K02959 - - 0.0000000000000000000003296 99.0
BYD3_k127_5540975_19 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs K12573 - - 0.00001818 50.0
BYD3_k127_5540975_2 PAP2 superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002961 537.0
BYD3_k127_5540975_3 Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components K03106 - 3.6.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003796 499.0
BYD3_k127_5540975_4 DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function K04485 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004958 472.0
BYD3_k127_5540975_5 signal peptide peptidase K04773 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006557 448.0
BYD3_k127_5540975_6 Domain of unknown function DUF21 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005007 392.0
BYD3_k127_5540975_7 Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids K01775 GO:0000270,GO:0003674,GO:0003824,GO:0005488,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008784,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016853,GO:0016854,GO:0016855,GO:0019842,GO:0030170,GO:0030203,GO:0034645,GO:0036094,GO:0036361,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0047661,GO:0048037,GO:0050662,GO:0070279,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0097159,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576 5.1.1.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001425 347.0
BYD3_k127_5540975_8 phosphatase K20074 - 3.1.3.16 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002178 302.0
BYD3_k127_5540975_9 Belongs to the RNA methyltransferase TrmD family K00554 GO:0000287,GO:0001510,GO:0002939,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050518,GO:0052906,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 297.0
BYD3_k127_5586360_0 DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase K14162 - 2.7.7.7 7.588e-217 693.0
BYD3_k127_5586360_1 Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs K08300 - 3.1.26.12 6.503e-210 681.0
BYD3_k127_5586360_10 HDOD domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000009671 325.0
BYD3_k127_5586360_11 DNA internalization-related competence protein ComEC Rec2 K02238 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000009164 314.0
BYD3_k127_5586360_12 Nucleotidyltransferase DNA polymerase involved in DNA repair K14161 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001516 289.0
BYD3_k127_5586360_13 Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1- P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA) K00912 - 2.7.1.130 0.00000000000000000000000000000000000000000000000000000000000000000000000000000002637 291.0
BYD3_k127_5586360_14 Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair K01356 GO:0000976,GO:0001067,GO:0001130,GO:0001217,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006282,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009432,GO:0009605,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0009991,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031668,GO:0032774,GO:0032991,GO:0032993,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0042802,GO:0043170,GO:0043565,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0048519,GO:0048523,GO:0048583,GO:0050789,GO:0050794,GO:0050896,GO:0051052,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0051716,GO:0060255,GO:0065007,GO:0071496,GO:0071704,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990837,GO:2000112,GO:2000113,GO:2001020,GO:2001141 3.4.21.88 0.00000000000000000000000000000000000000000000000000000000000000000000000000007656 263.0
BYD3_k127_5586360_15 Response regulator receiver - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003429 269.0
BYD3_k127_5586360_16 Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria K00979 GO:0000271,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005976,GO:0005996,GO:0006082,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0008690,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0016740,GO:0016772,GO:0016779,GO:0019294,GO:0019752,GO:0033692,GO:0034637,GO:0034645,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0046394,GO:0046400,GO:0046401,GO:0046872,GO:0070567,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 2.7.7.38 0.00000000000000000000000000000000000000000000000000000000000000000000000004634 256.0
BYD3_k127_5586360_17 MOSC N-terminal beta barrel domain K07140 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001371 250.0
BYD3_k127_5586360_18 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000001 233.0
BYD3_k127_5586360_19 Biopolymer K03561 - - 0.0000000000000000000000000000000000000000000000000000000000005623 216.0
BYD3_k127_5586360_2 Pyridine nucleotide-disulfide oxidoreductase domain-containing protein - - - 1.985e-206 655.0
BYD3_k127_5586360_20 Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1 1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division K13053,K14160 - - 0.000000000000000000000000000000000000000000000000000009523 196.0
BYD3_k127_5586360_21 Maf-like protein K06287 - - 0.0000000000000000000000000000000000000000000000001022 183.0
BYD3_k127_5586360_22 cheY-homologous receiver domain - - - 0.000000000000000000000000000000000000000003535 163.0
BYD3_k127_5586360_23 lactoylglutathione lyase activity K01759 - 4.4.1.5 0.000000000000000000000000000000000000000009189 156.0
BYD3_k127_5586360_24 Low molecular weight phosphatase family K01104 - 3.1.3.48 0.00000000000000000000000000000000000000002225 166.0
BYD3_k127_5586360_25 Protein of unknown function (DUF3224) - - - 0.00000000000000000000000000000000000000002544 158.0
BYD3_k127_5586360_26 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000000000498 163.0
BYD3_k127_5586360_27 Part of the ABC transporter complex LolCDE involved in the translocation of K09810 - - 0.0000000000000000000000000000000000002504 142.0
BYD3_k127_5586360_28 protein conserved in bacteria K09928 - - 0.0000000000000000000000000000000000002648 146.0
BYD3_k127_5586360_29 Biopolymer K03559 - - 0.000000000000000000000000000000006403 132.0
BYD3_k127_5586360_3 Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation K11085 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000103 546.0
BYD3_k127_5586360_30 Predicted membrane protein (DUF2339) - - - 0.0000000000000000000000000001222 134.0
BYD3_k127_5586360_31 alpha-galactosidase K01179,K01183 - 3.2.1.14,3.2.1.4 0.00000000000000000000000689 118.0
BYD3_k127_5586360_32 Belongs to the bacterial ribosomal protein bL32 family K02911 - - 0.0000000000000000000001068 98.0
BYD3_k127_5586360_33 Belongs to the UPF0434 family K09791 - - 0.000000000000000002641 88.0
BYD3_k127_5586360_34 Uncharacterized ACR, COG1399 K07040 - - 0.000000000001389 75.0
BYD3_k127_5586360_35 Alanine-zipper, major outer membrane lipoprotein - - - 0.000607 47.0
BYD3_k127_5586360_4 Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids K00648 - 2.3.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000616 436.0
BYD3_k127_5586360_5 Belongs to the glycosyl hydrolase 30 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006953 452.0
BYD3_k127_5586360_6 Fatty acid synthesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006025 328.0
BYD3_k127_5586360_7 guanyl-nucleotide exchange factor activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002073 331.0
BYD3_k127_5586360_8 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002754 327.0
BYD3_k127_5586360_9 Responsible for synthesis of pseudouridine from uracil K06179 - 5.4.99.24 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003744 316.0
BYD3_k127_5602232_0 Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine K00764 - 2.4.2.14 7.45e-222 702.0
BYD3_k127_5602232_1 Belongs to the class-I aminoacyl-tRNA synthetase family K01883 - 6.1.1.16 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000306 575.0
BYD3_k127_5602232_10 COG4445 Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA K06169 - - 0.000000000000000000000000000000000000000000000003586 185.0
BYD3_k127_5602232_11 FimV C-terminal K08086 - - 0.000000000000000000000000000235 129.0
BYD3_k127_5602232_12 Colicin v production K03558 GO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0008152,GO:0009058,GO:0009403,GO:0009404,GO:0009987,GO:0016020,GO:0019748,GO:0044237,GO:0044249,GO:0044464,GO:0044550,GO:0071944 - 0.00000000000000000000000373 108.0
BYD3_k127_5602232_13 PFAM Sporulation K03749 - - 0.00000000000000002064 91.0
BYD3_k127_5602232_2 Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) K01885 - 6.1.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002058 494.0
BYD3_k127_5602232_3 Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA K01963 - 2.1.3.15,6.4.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007344 434.0
BYD3_k127_5602232_4 Belongs to the folylpolyglutamate synthase family K11754 - 6.3.2.12,6.3.2.17 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008811 349.0
BYD3_k127_5602232_5 Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs K06173 GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002035 302.0
BYD3_k127_5602232_6 pfam mofrl K11529 - 2.7.1.165 0.000000000000000000000000000000000000000000000000000000000000000000000000000009332 277.0
BYD3_k127_5602232_7 Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell K03269 - 3.6.1.54 0.000000000000000000000000000000000000000000000000000000000000000000000000009445 260.0
BYD3_k127_5602232_8 serine threonine protein kinase K11912,K12132 - 2.7.11.1 0.000000000000000000000000000000000000000000000000000000000002209 231.0
BYD3_k127_5602232_9 PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides K03768 - 5.2.1.8 0.000000000000000000000000000000000000000000000000005776 189.0
BYD3_k127_5698344_0 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796,K00950,K01633 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0040007,GO:0042221,GO:0042364,GO:0042398,GO:0042493,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.13.11.81,2.5.1.15,2.7.6.3,4.1.2.25,5.1.99.8 0.000000000000000000000000000000000000000000000000000000000000000000000000004058 263.0
BYD3_k127_5698344_1 Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria K18672 - 2.7.7.85 0.00000000000000000000000000000000000000000000000000000000000000000000000007749 257.0
BYD3_k127_5698344_2 Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis K06997 GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0008144,GO:0019842,GO:0030170,GO:0036094,GO:0043167,GO:0043168,GO:0044464,GO:0048037,GO:0050662,GO:0070279,GO:0097159,GO:1901363 - 0.0000000000000000000000000000000000000000000000000003059 193.0
BYD3_k127_5698344_3 PFAM DivIVA K04074 - - 0.00000000000002566 83.0
BYD3_k127_5702168_0 Glycosyl hydrolase family 115 - - - 0.0 1159.0
BYD3_k127_5702168_1 radical SAM protein YgiQ - - - 0.0 1080.0
BYD3_k127_5702168_10 Acetyl xylan esterase (AXE1) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001192 280.0
BYD3_k127_5702168_11 Peptidase M56 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003793 276.0
BYD3_k127_5702168_12 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001355 270.0
BYD3_k127_5702168_13 Uncharacterized protein conserved in bacteria (DUF2272) - - - 0.00000000000000000000000000000000000000000000000000000000000000000001521 237.0
BYD3_k127_5702168_14 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000002353 216.0
BYD3_k127_5702168_15 glyoxalase III activity - - - 0.000000000000000000000000000000000000000000000000005974 185.0
BYD3_k127_5702168_16 Penicillinase repressor - - - 0.00000000000000000000000000000000000000000000009612 170.0
BYD3_k127_5702168_17 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000008217 184.0
BYD3_k127_5702168_18 helix_turn_helix, Arsenical Resistance Operon Repressor - - - 0.000000000000000000000000000000000000000000001047 167.0
BYD3_k127_5702168_19 - - - - 0.000000000000000000000000000000000001095 148.0
BYD3_k127_5702168_2 E-Z type HEAT repeats - - - 2.178e-304 973.0
BYD3_k127_5702168_20 Tetratricopeptide repeat - - - 0.0000000000000000000000000000000007563 152.0
BYD3_k127_5702168_21 - - - - 0.00000000000000000000000000000002151 136.0
BYD3_k127_5702168_22 Alpha-L-arabinofuranosidase B (ABFB) domain - - - 0.00000000000000000000000000000003748 132.0
BYD3_k127_5702168_23 Amidohydrolase family - - - 0.0000000000000000000000000000001269 139.0
BYD3_k127_5702168_24 - - - - 0.00000000000000000000000000005187 129.0
BYD3_k127_5702168_25 - - - - 0.000000000000000000000005871 117.0
BYD3_k127_5702168_26 PFAM Tetratricopeptide repeat - - - 0.0000000000000000000000284 117.0
BYD3_k127_5702168_27 ParE toxin of type II toxin-antitoxin system, parDE - - - 0.0000000000000000000002097 102.0
BYD3_k127_5702168_28 tetratricopeptide repeat - - - 0.0000000000000000006197 103.0
BYD3_k127_5702168_29 Belongs to the UPF0235 family K09131 - - 0.000000000000000002687 93.0
BYD3_k127_5702168_3 X-Pro dipeptidyl-peptidase (S15 family) - - - 1.346e-233 744.0
BYD3_k127_5702168_30 Belongs to the RNase T2 family K01166,K01169 - 3.1.27.1,3.1.27.6 0.00000000000000004404 91.0
BYD3_k127_5702168_31 LytTr DNA-binding domain - - - 0.0000000000000542 81.0
BYD3_k127_5702168_32 LTXXQ motif family protein - - - 0.00000002753 62.0
BYD3_k127_5702168_4 Glycosyl-hydrolase 97 C-terminal, oligomerisation - - - 1.756e-216 690.0
BYD3_k127_5702168_5 BlaR1 peptidase M56 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 378.0
BYD3_k127_5702168_6 PFAM aldo keto reductase K06221 - 1.1.1.346 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008161 327.0
BYD3_k127_5702168_7 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001445 321.0
BYD3_k127_5702168_8 PFAM 3-carboxy-cis,cis-muconate lactonizing enzyme K07404 - 3.1.1.31 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001305 297.0
BYD3_k127_5702168_9 Glutathione S-transferase N-terminal domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004102 282.0
BYD3_k127_5708602_0 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02394 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001306 496.0
BYD3_k127_5708602_1 Flagellar hook protein FlgE K02390 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007121 469.0
BYD3_k127_5708602_10 Belongs to the flagella basal body rod proteins family K02388 - - 0.0000000000000000000000000000000000000000000000239 174.0
BYD3_k127_5708602_11 Required for flagellar hook formation. May act as a scaffolding protein K02389 - - 0.000000000000000000000000000000000000003286 154.0
BYD3_k127_5708602_12 Flagellar rod assembly protein muramidase FlgJ K02395 - - 0.000000000000000000000000000000000001426 144.0
BYD3_k127_5708602_13 Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body K02387 - - 0.00000000000000000000000000000000000429 144.0
BYD3_k127_5708602_14 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control K05788 - - 0.00000000000000000000000000000000001209 136.0
BYD3_k127_5708602_15 Tetratricopeptide repeat - - - 0.00000000000000000000000000000001231 139.0
BYD3_k127_5708602_16 Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P-ring assembly K02386 - - 0.000000000000000000000375 105.0
BYD3_k127_5708602_17 competence protein ComEA K02237 - - 0.000000000000002278 89.0
BYD3_k127_5708602_18 FlgN protein K02399 - - 0.0000005936 57.0
BYD3_k127_5708602_19 COG2747 Negative regulator of flagellin synthesis (anti-sigma28 factor) K02398 - - 0.00000342 54.0
BYD3_k127_5708602_2 PFAM Formylglycine-generating sulfatase enzyme K20333 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002206 416.0
BYD3_k127_5708602_3 Belongs to the flagella basal body rod proteins family K02392 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 374.0
BYD3_k127_5708602_4 UTP-glucose-1-phosphate uridylyltransferase K00963 - 2.7.7.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000357 373.0
BYD3_k127_5708602_5 acetylesterase activity K07214 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001368 323.0
BYD3_k127_5708602_6 Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate K00800 GO:0003674,GO:0003824,GO:0003866,GO:0006082,GO:0008150,GO:0008152,GO:0009058,GO:0009423,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046417,GO:0071704,GO:1901576 2.5.1.19 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007332 288.0
BYD3_k127_5708602_7 TIGRFAM flagellar basal-body rod protein FlgF K02391 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000009277 267.0
BYD3_k127_5708602_8 Protein of unknown function (DUF533) - - - 0.00000000000000000000000000000000000000000000000000000000000000001315 233.0
BYD3_k127_5708602_9 Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation K02393 - - 0.00000000000000000000000000000000000000000000000000000001725 204.0
BYD3_k127_5924404_0 A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner K02470 - 5.99.1.3 0.0 1076.0
BYD3_k127_5924404_1 PFAM UvrD REP helicase K03657 - 3.6.4.12 2.341e-300 936.0
BYD3_k127_5924404_10 Di-haem oxidoreductase, putative peroxidase K01201 - 3.2.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000109 577.0
BYD3_k127_5924404_100 Transcriptional regulator - - - 0.0002533 49.0
BYD3_k127_5924404_101 - - - - 0.0003092 49.0
BYD3_k127_5924404_11 PFAM TrkA-N domain K03499 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001154 567.0
BYD3_k127_5924404_12 response regulator K07712 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000435 578.0
BYD3_k127_5924404_13 Belongs to the beta-ketoacyl-ACP synthases family K09458 - 2.3.1.179 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002116 557.0
BYD3_k127_5924404_14 Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA K03498 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002433 551.0
BYD3_k127_5924404_15 glycyl-tRNA synthetase, alpha subunit K01878 - 6.1.1.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 512.0
BYD3_k127_5924404_16 Bacterial protein of unknown function (DUF885) K01322 - 3.4.21.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001135 523.0
BYD3_k127_5924404_17 Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily K17828 - 1.3.1.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002226 509.0
BYD3_k127_5924404_18 Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34 K03650 GO:0000166,GO:0001510,GO:0001882,GO:0001883,GO:0002097,GO:0002098,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006457,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009268,GO:0009451,GO:0009628,GO:0009636,GO:0009987,GO:0010467,GO:0016020,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0019003,GO:0030488,GO:0030955,GO:0031420,GO:0032259,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034470,GO:0034641,GO:0034660,GO:0035639,GO:0036094,GO:0042221,GO:0042802,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0050896,GO:0061077,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005408 505.0
BYD3_k127_5924404_19 Belongs to the beta-ketoacyl-ACP synthases family K00647,K09458 - 2.3.1.179,2.3.1.41 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001667 495.0
BYD3_k127_5924404_2 NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 K03495 - - 1.637e-270 845.0
BYD3_k127_5924404_20 Bacterial extracellular solute-binding proteins, family 5 Middle K15580 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005497 493.0
BYD3_k127_5924404_21 Flavin containing amine oxidoreductase K00274 - 1.4.3.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 473.0
BYD3_k127_5924404_22 Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins K03217 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004974 450.0
BYD3_k127_5924404_23 TonB dependent receptor - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 462.0
BYD3_k127_5924404_24 COG0644 Dehydrogenases (flavoproteins) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002093 430.0
BYD3_k127_5924404_25 Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria K02338 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003477 417.0
BYD3_k127_5924404_26 Cytidylyltransferase family K00981 - 2.7.7.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002678 398.0
BYD3_k127_5924404_27 Enoyl-(Acyl carrier protein) reductase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003793 382.0
BYD3_k127_5924404_28 Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid K01069 - 3.1.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008313 372.0
BYD3_k127_5924404_29 EamA-like transporter family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 368.0
BYD3_k127_5924404_3 highly regulated protein controlled by the addition removal of adenylyl groups by adenylyltransferase from specific tyrosine residues K01915 - 6.3.1.2 2.886e-250 778.0
BYD3_k127_5924404_30 Glycerol-3-phosphate dehydrogenase K00057 GO:0003674,GO:0003824,GO:0004367,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006072,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009987,GO:0016491,GO:0016614,GO:0016616,GO:0019637,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044424,GO:0044444,GO:0044464,GO:0045017,GO:0046474,GO:0046486,GO:0047952,GO:0052646,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.1.1.94 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003488 351.0
BYD3_k127_5924404_31 KR domain K00059 - 1.1.1.100 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001557 353.0
BYD3_k127_5924404_32 TAP-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 345.0
BYD3_k127_5924404_33 Belongs to the OMP decarboxylase family. Type 2 subfamily K01591 - 4.1.1.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007221 358.0
BYD3_k127_5924404_34 signal transduction histidine kinase K07708 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002476 330.0
BYD3_k127_5924404_35 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001091 331.0
BYD3_k127_5924404_36 Bacterial lipid A biosynthesis acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003491 322.0
BYD3_k127_5924404_37 permease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003907 320.0
BYD3_k127_5924404_38 Acyl-coenzyme A synthetases AMP-(fatty) acid ligases - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008951 327.0
BYD3_k127_5924404_39 Protein of unknown function (DUF692) K09930 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003651 310.0
BYD3_k127_5924404_4 membrane - - - 1.989e-230 738.0
BYD3_k127_5924404_40 Diguanylate cyclase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007457 327.0
BYD3_k127_5924404_41 Glycosyl Transferase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000008058 292.0
BYD3_k127_5924404_42 glutathione transferase activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001455 285.0
BYD3_k127_5924404_43 pteridine-dependent deoxygenase K18240 - 4.1.3.40,4.1.3.45 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001596 288.0
BYD3_k127_5924404_44 abc transporter atp-binding protein K09697 - 3.6.3.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003342 285.0
BYD3_k127_5924404_45 RES domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007459 277.0
BYD3_k127_5924404_46 CYTH - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003762 259.0
BYD3_k127_5924404_47 Appr-1'-p processing enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001446 254.0
BYD3_k127_5924404_48 Belongs to the GST superfamily K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000008414 254.0
BYD3_k127_5924404_49 Domain of unknown function (DU1801) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002514 241.0
BYD3_k127_5924404_5 peptidase M13 - - - 4.787e-217 694.0
BYD3_k127_5924404_50 it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP K03629 GO:0000731,GO:0006139,GO:0006259,GO:0006281,GO:0006302,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0018130,GO:0019438,GO:0033554,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0071897,GO:0090304,GO:1901360,GO:1901362,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000004813 251.0
BYD3_k127_5924404_51 Phosphate acyltransferases K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000000000000002046 250.0
BYD3_k127_5924404_52 peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000001434 247.0
BYD3_k127_5924404_53 transmembrane transport K09696 - - 0.0000000000000000000000000000000000000000000000000000000000000000003684 245.0
BYD3_k127_5924404_54 CDP-alcohol phosphatidyltransferase K00995 - 2.7.8.5 0.000000000000000000000000000000000000000000000000000000000000000008933 231.0
BYD3_k127_5924404_55 LysR substrate binding domain K03566 - - 0.00000000000000000000000000000000000000000000000000000000000000001272 236.0
BYD3_k127_5924404_56 COG0793 Periplasmic protease - - - 0.00000000000000000000000000000000000000000000000000000000000000003135 232.0
BYD3_k127_5924404_57 PFAM SNARE associated Golgi protein K03975 - - 0.000000000000000000000000000000000000000000000000000000000000002147 241.0
BYD3_k127_5924404_58 PFAM Phospholipid glycerol acyltransferase K00655 - 2.3.1.51 0.000000000000000000000000000000000000000000000000000000000008041 215.0
BYD3_k127_5924404_59 Acyltransferase - - - 0.00000000000000000000000000000000000000000000000000000000009299 223.0
BYD3_k127_5924404_6 Glycyl-tRNA synthetase beta subunit K01879 - 6.1.1.14 4.97e-212 682.0
BYD3_k127_5924404_60 Beta-ketoacyl synthase, N-terminal domain - - - 0.0000000000000000000000000000000000000000000000000000006682 212.0
BYD3_k127_5924404_61 PFAM Glutathione-dependent formaldehyde-activating - - - 0.00000000000000000000000000000000000000000000000000001045 192.0
BYD3_k127_5924404_62 ribosylpyrimidine nucleosidase activity - - - 0.00000000000000000000000000000000000000000000000000002737 199.0
BYD3_k127_5924404_63 Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide K03216 - 2.1.1.207 0.0000000000000000000000000000000000000000000000000004969 188.0
BYD3_k127_5924404_64 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000002109 183.0
BYD3_k127_5924404_65 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000005898 180.0
BYD3_k127_5924404_66 FecR protein K07165 - - 0.000000000000000000000000000000000000000000000000407 194.0
BYD3_k127_5924404_67 - - - - 0.000000000000000000000000000000000000000000000001229 193.0
BYD3_k127_5924404_68 Rhomboid family K19225 - 3.4.21.105 0.000000000000000000000000000000000000000000000001388 193.0
BYD3_k127_5924404_69 6-O-methylguanine DNA methyltransferase, DNA binding domain K00567 GO:0003674,GO:0003824,GO:0003908,GO:0005575,GO:0005623,GO:0005886,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0008168,GO:0008172,GO:0009987,GO:0016020,GO:0016740,GO:0016741,GO:0032259,GO:0033554,GO:0034641,GO:0035510,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044464,GO:0046483,GO:0050896,GO:0051409,GO:0051716,GO:0071704,GO:0071944,GO:0090304,GO:1901360 2.1.1.63 0.000000000000000000000000000000000000000000005873 171.0
BYD3_k127_5924404_7 Tryptophan halogenase - - - 3.642e-201 654.0
BYD3_k127_5924404_70 CBS domain - - - 0.000000000000000000000000000000000000000000008496 170.0
BYD3_k127_5924404_71 - - - - 0.000000000000000000000000000000000000000000008949 179.0
BYD3_k127_5924404_72 Protein of unknown function (DUF2384) - - - 0.00000000000000000000000000000000000000000001216 166.0
BYD3_k127_5924404_73 thioesterase K07107 - - 0.000000000000000000000000000000000000000007585 158.0
BYD3_k127_5924404_74 DoxX - - - 0.000000000000000000000000000000000000000426 157.0
BYD3_k127_5924404_75 Diguanylate cyclase K21084 - 2.7.7.65 0.0000000000000000000000000000000000000004484 170.0
BYD3_k127_5924404_76 One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA K03071 GO:0002790,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006605,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0032940,GO:0033036,GO:0034613,GO:0042886,GO:0043952,GO:0044424,GO:0044444,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051082,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0070727,GO:0071702,GO:0071705,GO:0071806,GO:0072321 - 0.000000000000000000000000000000000000002422 152.0
BYD3_k127_5924404_77 TIGRFAM diguanylate cyclase (GGDEF) domain - - - 0.000000000000000000000000000000000000007937 166.0
BYD3_k127_5924404_78 Could be involved in insertion of integral membrane proteins into the membrane K08998 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0008104,GO:0008150,GO:0008565,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0016043,GO:0031224,GO:0031226,GO:0032977,GO:0033036,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0051179,GO:0051205,GO:0051234,GO:0051641,GO:0061024,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072657,GO:0090150 - 0.000000000000000000000000000003235 121.0
BYD3_k127_5924404_79 Protein of unknown function (DUF423) - - - 0.000000000000000000000000000003321 126.0
BYD3_k127_5924404_8 it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids K02313 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005084 610.0
BYD3_k127_5924404_80 acyl carrier protein K02078 - - 0.000000000000000000000000000005829 121.0
BYD3_k127_5924404_81 PFAM Membrane protein of K08972 - - 0.00000000000000000000000000003213 120.0
BYD3_k127_5924404_82 DNA-templated transcription, initiation K03088 - - 0.00000000000000000000000000005574 124.0
BYD3_k127_5924404_83 dehydratase - - - 0.0000000000000000000000000001886 119.0
BYD3_k127_5924404_84 Glyoxalase-like domain - - - 0.000000000000000000000000001112 116.0
BYD3_k127_5924404_85 - - - - 0.00000000000000000000000000483 119.0
BYD3_k127_5924404_86 membrane - - - 0.000000000000000000000000008888 119.0
BYD3_k127_5924404_87 Rhodanese Homology Domain - - - 0.000000000000000000000000129 112.0
BYD3_k127_5924404_88 Fatty acyl CoA synthetase - - - 0.00000000000000000000000206 114.0
BYD3_k127_5924404_89 Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins K03676 - - 0.00000000000000000000000946 109.0
BYD3_k127_5924404_9 Amidase K01426 - 3.5.1.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004981 593.0
BYD3_k127_5924404_90 - - - - 0.00000000000000000006891 104.0
BYD3_k127_5924404_91 Predicted integral membrane protein (DUF2282) - - - 0.0000000000000000004391 89.0
BYD3_k127_5924404_92 Putative DNA-binding domain - - - 0.00000000000000000107 96.0
BYD3_k127_5924404_93 Phosphopantetheine attachment site K02078 - - 0.0000000000000001937 85.0
BYD3_k127_5924404_94 FabA-like domain - - - 0.0000000000000001971 82.0
BYD3_k127_5924404_95 RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme K03536 GO:0000966,GO:0001682,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004526,GO:0004540,GO:0004549,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005655,GO:0005730,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0030677,GO:0030681,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0099116,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1902555,GO:1905348,GO:1990904 3.1.26.5 0.0000000000000002294 86.0
BYD3_k127_5924404_96 Putative FMN-binding domain K07734 - - 0.000000000002498 75.0
BYD3_k127_5924404_97 Belongs to the bacterial ribosomal protein bL34 family K02914 - - 0.000000000002662 68.0
BYD3_k127_5924404_98 RHS Repeat - - - 0.000000000003529 72.0
BYD3_k127_5940433_0 Aminopeptidase puromycin sensitive - - - 1.41e-238 780.0
BYD3_k127_5940433_1 Belongs to the cysteine synthase cystathionine beta- synthase family - - - 3.138e-220 692.0
BYD3_k127_5940433_10 AntiSigma factor - - - 0.0000000000008578 75.0
BYD3_k127_5940433_11 HAF family - - - 0.000000002859 69.0
BYD3_k127_5940433_2 Di-haem cytochrome c peroxidase K00428 - 1.11.1.5 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003132 314.0
BYD3_k127_5940433_3 oxidoreductase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000008856 262.0
BYD3_k127_5940433_4 Belongs to the peptidase S11 family K07262 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000003682 263.0
BYD3_k127_5940433_5 Domain of unknown function (DUF4382) - - - 0.000000000000000000000000000000000000000000000000000000000000001405 230.0
BYD3_k127_5940433_6 Carboxymuconolactone decarboxylase family - - - 0.000000000000000000000000000000000000000000000004112 195.0
BYD3_k127_5940433_7 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000001605 130.0
BYD3_k127_5940433_8 - - - - 0.000000000000000000000000000003248 128.0
BYD3_k127_5940433_9 COG0457 FOG TPR repeat - - - 0.000000000000000000000000001206 129.0
BYD3_k127_6013255_0 Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia K01657,K13503 - 4.1.3.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001753 403.0
BYD3_k127_6013255_1 AAA-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000006205 265.0
BYD3_k127_6013255_2 endoribonuclease L-PSP - - - 0.00000000000000000000000000000000000000000000000006973 184.0
BYD3_k127_6013255_3 COG0512 Anthranilate para-aminobenzoate synthases component II K01658,K01664 GO:0000162,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005950,GO:0006082,GO:0006520,GO:0006568,GO:0006575,GO:0006576,GO:0006586,GO:0006725,GO:0006732,GO:0006760,GO:0006807,GO:0008150,GO:0008152,GO:0008483,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009108,GO:0009308,GO:0009309,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016769,GO:0018130,GO:0019438,GO:0019752,GO:0032991,GO:0034641,GO:0042398,GO:0042401,GO:0042430,GO:0042435,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046820,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 2.6.1.85,4.1.3.27 0.000000000000000000000000000000002815 132.0
BYD3_k127_6034955_0 Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate K01952 - 6.3.5.3 0.0 1582.0
BYD3_k127_6034955_1 Malic enzyme K00029 - 1.1.1.40 0.0 1175.0
BYD3_k127_6034955_10 daunorubicin resistance ABC transporter K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001471 466.0
BYD3_k127_6034955_11 Domain of Unknown Function (DUF1080) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004609 464.0
BYD3_k127_6034955_12 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000134 461.0
BYD3_k127_6034955_13 Succinylglutamate desuccinylase / Aspartoacylase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002436 446.0
BYD3_k127_6034955_14 Protein of unknown function DUF72 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003847 411.0
BYD3_k127_6034955_15 COG4618 ABC-type protease lipase transport system, ATPase and permease components K16299 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 421.0
BYD3_k127_6034955_16 Transport permease protein K01992 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009136 413.0
BYD3_k127_6034955_17 Histone deacetylase domain K04768 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003287 396.0
BYD3_k127_6034955_18 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 359.0
BYD3_k127_6034955_19 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004171 370.0
BYD3_k127_6034955_2 Haemolysin-type calcium-binding repeat (2 copies) - - - 1.302e-278 890.0
BYD3_k127_6034955_20 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000328 347.0
BYD3_k127_6034955_21 2OG-Fe(II) oxygenase K00472 - 1.14.11.2 0.00000000000000000000000000000000000000000000000000000000000000000000000003942 259.0
BYD3_k127_6034955_22 type I secretion membrane fusion K02022,K12537 - - 0.000000000000000000000000000000000000000000000000000000000000000000000001883 265.0
BYD3_k127_6034955_23 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000000001676 237.0
BYD3_k127_6034955_24 Involved in the tonB-independent uptake of proteins K03641,K10117 - - 0.00000000000000000000000000000000000000000000000000000000000000006345 237.0
BYD3_k127_6034955_25 Belongs to the UPF0312 family - - - 0.000000000000000000000000000000000000000000000000000000000000006969 222.0
BYD3_k127_6034955_26 3-carboxymuconate cyclase quinoprotein amine dehydrogenase, beta chain-like - - - 0.000000000000000000000000000000000000000000000000000000001203 228.0
BYD3_k127_6034955_27 Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella K18691 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0006022,GO:0006026,GO:0006027,GO:0006807,GO:0008150,GO:0008152,GO:0008933,GO:0009056,GO:0009057,GO:0009253,GO:0009279,GO:0016020,GO:0016740,GO:0016757,GO:0019867,GO:0030203,GO:0030312,GO:0030313,GO:0031975,GO:0043170,GO:0044462,GO:0044464,GO:0061783,GO:0071704,GO:0071944,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - 0.0000000000000000000000000000000000000000000000000000008499 201.0
BYD3_k127_6034955_28 Thioredoxin - - - 0.0000000000000000000000000000000000000000000000000002399 202.0
BYD3_k127_6034955_29 Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) - - - 0.000000000000000000000000000000000000000000000000347 179.0
BYD3_k127_6034955_3 ABC transporter, ATP-binding protein K06020 - 3.6.3.25 2.489e-249 784.0
BYD3_k127_6034955_30 FAD binding domain - - - 0.0000000000000000000000000000000000000000000000007489 189.0
BYD3_k127_6034955_31 YCII-related domain - - - 0.00000000000000000000000000000000000000007954 153.0
BYD3_k127_6034955_32 Domain of unknown function (DUF1820) - - - 0.00000000000000000000000000000000000001051 148.0
BYD3_k127_6034955_33 Protein conserved in bacteria - - - 0.0000000000000000000000000000000000001523 152.0
BYD3_k127_6034955_34 Belongs to the acetyltransferase family. ArgA subfamily K00537,K00619,K07755 - 1.20.4.1,2.1.1.137,2.3.1.1 0.000000000000000000000000000000000149 137.0
BYD3_k127_6034955_35 SnoaL-like domain - - - 0.0000000000000000000000000000000006751 135.0
BYD3_k127_6034955_36 SnoaL-like domain - - - 0.0000000000000000000000007601 109.0
BYD3_k127_6034955_37 conserved protein, contains FHA domain K11913 - - 0.0000000000000000000006037 109.0
BYD3_k127_6034955_38 protocatechuate 3,4-dioxygenase activity K02014 - - 0.000000000000001494 91.0
BYD3_k127_6034955_39 Lactonase, 7-bladed beta-propeller K07404 - 3.1.1.31 0.000000000000003661 90.0
BYD3_k127_6034955_4 protein conserved in bacteria - - - 4.685e-244 769.0
BYD3_k127_6034955_40 - - - - 0.0000000000002032 82.0
BYD3_k127_6034955_41 lytic transglycosylase activity K03194 - - 0.0000000001949 73.0
BYD3_k127_6034955_42 - - - - 0.00007119 53.0
BYD3_k127_6034955_5 Na dependent nucleoside transporter K03317 - - 7.924e-239 742.0
BYD3_k127_6034955_6 TIGRFAM amino acid adenylation domain - - - 3.272e-204 683.0
BYD3_k127_6034955_7 Amidohydrolase K07045 - - 7.123e-201 636.0
BYD3_k127_6034955_8 Oxidoreductase family, NAD-binding Rossmann fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002622 552.0
BYD3_k127_6034955_9 TIGRFAM RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000468 496.0
BYD3_k127_609917_0 Catalyzes the synthesis of GMP from XMP K01951 GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0042802,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 2.286e-232 728.0
BYD3_k127_609917_1 Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth K00088 - 1.1.1.205 2.39e-222 701.0
BYD3_k127_609917_10 Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) K07568 - 2.4.99.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009419 370.0
BYD3_k127_609917_11 Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins K04487 GO:0001522,GO:0003674,GO:0003824,GO:0004123,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006790,GO:0006807,GO:0008033,GO:0008144,GO:0008150,GO:0008152,GO:0008483,GO:0009000,GO:0009058,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016226,GO:0016740,GO:0016769,GO:0016782,GO:0016783,GO:0016829,GO:0016846,GO:0018130,GO:0018131,GO:0019842,GO:0022607,GO:0030170,GO:0031071,GO:0031119,GO:0031163,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046484,GO:0048037,GO:0050662,GO:0051186,GO:0070279,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:0097163,GO:0140104,GO:1901360,GO:1901363 2.8.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001058 375.0
BYD3_k127_609917_12 Inositol monophosphatase K01092 - 3.1.3.25 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007365 316.0
BYD3_k127_609917_13 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K17713 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0016491,GO:0055114 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002371 291.0
BYD3_k127_609917_14 Peptidase family M23 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000007236 281.0
BYD3_k127_609917_15 Integral membrane protein TerC family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000001464 272.0
BYD3_k127_609917_16 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03074 - - 0.00000000000000000000000000000000000000000000000000000000000000000000002302 252.0
BYD3_k127_609917_17 Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA K15396 - 2.1.1.200 0.00000000000000000000000000000000000000000000000000000000000000000000002436 251.0
BYD3_k127_609917_18 Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate K00940 GO:0003674,GO:0003824,GO:0004550,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006165,GO:0006220,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009117,GO:0009132,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019205,GO:0019637,GO:0034641,GO:0044237,GO:0044238,GO:0044281,GO:0044464,GO:0046483,GO:0046939,GO:0055086,GO:0071704,GO:0072521,GO:0072527,GO:1901360,GO:1901564 2.7.4.6 0.0000000000000000000000000000000000000000000000000000000000000000002526 231.0
BYD3_k127_609917_19 NUDIX hydrolase - - - 0.000000000000000000000000000000000000000000000000000000000001982 214.0
BYD3_k127_609917_2 C-terminus of AA_permease K03294 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001062 599.0
BYD3_k127_609917_20 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.00000000000000000000000000000000000000000000000000000000003158 216.0
BYD3_k127_609917_21 Histidine kinase - - - 0.0000000000000000000000000000000000000000000000000000001177 209.0
BYD3_k127_609917_22 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000008807 188.0
BYD3_k127_609917_23 LytTr DNA-binding domain - - - 0.00000000000000000000000000000000000000000000000000009684 199.0
BYD3_k127_609917_24 Phosphopantetheine attachment site - - - 0.000000000000000000000000000000000000000000001186 175.0
BYD3_k127_609917_25 Is able to transfer iron-sulfur clusters to apo- ferredoxin. Multiple cycles of 2Fe2S cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system K05997,K13628 GO:0003674,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008198,GO:0009987,GO:0010467,GO:0016043,GO:0016226,GO:0016530,GO:0019538,GO:0022607,GO:0031163,GO:0034986,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0048037,GO:0051186,GO:0051536,GO:0051537,GO:0051540,GO:0051604,GO:0071704,GO:0071840,GO:0097428,GO:0140104,GO:1901564 - 0.0000000000000000000000000000000000000001333 155.0
BYD3_k127_609917_26 Preprotein translocase subunit YajC K03210 - - 0.000000000000000000000000000000000004221 139.0
BYD3_k127_609917_27 type IV pilus biogenesis stability protein PilW K02656 - - 0.0000000000000000000000000000000008773 147.0
BYD3_k127_609917_28 Tetratricopeptide repeat-like domain - GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0009897,GO:0009986,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0031233,GO:0044425,GO:0044459,GO:0044464,GO:0071575,GO:0071944,GO:0098552 - 0.000000000000000000000000007546 123.0
BYD3_k127_609917_29 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000007617 123.0
BYD3_k127_609917_3 Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) K00773 - 2.4.2.29 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008931 503.0
BYD3_k127_609917_30 PDZ domain - - - 0.000000000000000000001922 109.0
BYD3_k127_609917_31 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0006139,GO:0006163,GO:0006637,GO:0006725,GO:0006732,GO:0006753,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009117,GO:0009150,GO:0009259,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016853,GO:0016866,GO:0017076,GO:0017111,GO:0019001,GO:0019637,GO:0019693,GO:0019842,GO:0031419,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0033865,GO:0033875,GO:0034032,GO:0034641,GO:0034784,GO:0035383,GO:0035639,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043603,GO:0044237,GO:0044238,GO:0044281,GO:0046483,GO:0046906,GO:0046983,GO:0047727,GO:0048037,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:0097159,GO:0097367,GO:1901135,GO:1901265,GO:1901360,GO:1901363,GO:1901564 5.4.99.13 0.000000000000001708 76.0
BYD3_k127_609917_32 protein conserved in bacteria K15539 - - 0.000000000000001758 87.0
BYD3_k127_609917_33 Cytochrome P460 - - - 0.000000000002791 74.0
BYD3_k127_609917_4 histidyl-tRNA synthetase K01892 - 6.1.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001894 495.0
BYD3_k127_609917_5 Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA K03072 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008176 504.0
BYD3_k127_609917_6 GTPase that plays an essential role in the late steps of ribosome biogenesis K03977 GO:0000027,GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003924,GO:0005488,GO:0005515,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006996,GO:0008150,GO:0009987,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0017076,GO:0017111,GO:0019001,GO:0022607,GO:0022613,GO:0022618,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0032794,GO:0034622,GO:0035639,GO:0036094,GO:0042254,GO:0042255,GO:0042273,GO:0043021,GO:0043022,GO:0043023,GO:0043167,GO:0043168,GO:0043933,GO:0044085,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:0097159,GO:0097216,GO:0097367,GO:1901265,GO:1901363 - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002686 488.0
BYD3_k127_609917_7 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03601 - 3.1.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003736 470.0
BYD3_k127_609917_8 Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs K06941 - 2.1.1.192 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001466 450.0
BYD3_k127_609917_9 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006521 395.0
BYD3_k127_6152254_0 ABC transporter transmembrane region K06147,K11085 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007404 603.0
BYD3_k127_6152254_1 COG0626 Cystathionine beta-lyases cystathionine gamma-synthases K01739,K01761 - 2.5.1.48,4.4.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006152 353.0
BYD3_k127_6152254_2 Calcineurin-like phosphoesterase superfamily domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001059 326.0
BYD3_k127_6152254_3 Phenazine biosynthesis-like protein K06998 - 5.3.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001364 288.0
BYD3_k127_6152254_4 Protein of unknown function (DUF1428) - - - 0.0000000000000000000000000000000000000000000000005641 177.0
BYD3_k127_6218330_0 histidine kinase HAMP region domain protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000178 448.0
BYD3_k127_6218330_1 ATPase activity K02045 - 3.6.3.25 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002881 419.0
BYD3_k127_6218330_2 Binding-protein-dependent transport system inner membrane component K02047 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008099 378.0
BYD3_k127_6218330_3 sulfate transport system, permease K02046 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001604 359.0
BYD3_k127_6218330_4 Two component transcriptional regulator, winged helix family - - - 0.00000000000000000000000000000000000000000000000000000000000000000007996 257.0
BYD3_k127_6218330_5 COG0811 Biopolymer transport proteins - - - 0.00000000000000000000000000000000000000000000000000000000000000000476 235.0
BYD3_k127_6244386_0 Peptidase family M48 - - - 9.039e-313 1000.0
BYD3_k127_6244386_1 Alpha-L-fucosidase K01206 - 3.2.1.51 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003938 576.0
BYD3_k127_6244386_10 Domain of unknown function (DUF4439) - - - 0.000000000000000000000000000000000000000000000000000000000006572 215.0
BYD3_k127_6244386_11 Membrane - - - 0.0000000000000000000000000000000000000000002574 174.0
BYD3_k127_6244386_12 Domain of unknown function (DUF4129) - - - 0.000000000000000000000000000000000000000001127 166.0
BYD3_k127_6244386_13 CGNR zinc finger - - - 0.00000000000000000000000000000000000000005763 159.0
BYD3_k127_6244386_14 L-rhamnose mutarotase K03534 - 5.1.3.32 0.000000000000000000000000000000000000001137 155.0
BYD3_k127_6244386_15 - - - - 0.0000000000000000000000000000000000004638 146.0
BYD3_k127_6244386_16 - - - - 0.0000000000000000000000000000000003774 139.0
BYD3_k127_6244386_17 Cytochrome c K08738 - - 0.00000000000000000000000000002944 120.0
BYD3_k127_6244386_18 cellulase activity - - - 0.000000000000000000004168 109.0
BYD3_k127_6244386_19 N2227 K19787 GO:0003674,GO:0003824,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259 2.1.1.22 0.00000008284 65.0
BYD3_k127_6244386_2 hydrolases or acyltransferases (alpha beta hydrolase superfamily) K00433 - 1.11.1.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001378 479.0
BYD3_k127_6244386_3 Domain of unknown function (DUF4394) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002405 479.0
BYD3_k127_6244386_4 Protein of unknown function DUF58 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001472 456.0
BYD3_k127_6244386_5 alpha/beta hydrolase fold - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005461 446.0
BYD3_k127_6244386_6 ATPase family associated with various cellular activities (AAA) K03924 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005474 377.0
BYD3_k127_6244386_7 Stage II sporulation protein M - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001432 347.0
BYD3_k127_6244386_8 RDD family - - - 0.0000000000000000000000000000000000000000000000000000000000000004843 228.0
BYD3_k127_6244386_9 - - - - 0.0000000000000000000000000000000000000000000000000000000000001321 221.0
BYD3_k127_635374_0 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K18138 - - 1.24e-301 957.0
BYD3_k127_635374_1 WD40-like Beta Propeller Repeat - - - 7.916e-254 804.0
BYD3_k127_635374_10 Belongs to the D-alanine--D-alanine ligase family K01921,K01955 - 6.3.2.4,6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001638 396.0
BYD3_k127_635374_11 Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine cysteine desulfurase (IscS) system K14058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001448 398.0
BYD3_k127_635374_12 Sulfurtransferase K01011 - 2.8.1.1,2.8.1.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002872 299.0
BYD3_k127_635374_13 LemA family K03744 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001328 282.0
BYD3_k127_635374_14 Putative zinc-binding metallo-peptidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000002772 288.0
BYD3_k127_635374_15 TonB dependent receptor K02014 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000007467 281.0
BYD3_k127_635374_16 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K03585 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000002805 286.0
BYD3_k127_635374_17 PFAM ADP-ribosylation Crystallin J1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002919 274.0
BYD3_k127_635374_18 Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated K00567,K10778 - 2.1.1.63 0.000000000000000000000000000000000000000000000000000000000000000000000002415 254.0
BYD3_k127_635374_19 Methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002497 255.0
BYD3_k127_635374_2 peptidase - - - 1.953e-227 725.0
BYD3_k127_635374_20 Domain of unknown function (DUF1731) K07071 - - 0.000000000000000000000000000000000000000000000000000000000000000000000002599 263.0
BYD3_k127_635374_21 Thrombospondin type 3 repeat K03286 - - 0.000000000000000000000000000000000000000000000000000000000000000000001563 252.0
BYD3_k127_635374_22 Belongs to the GbsR family - - - 0.00000000000000000000000000000000000000000000000000000000000009263 218.0
BYD3_k127_635374_23 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length K04760 - - 0.000000000000000000000000000000000000000000000000000000000006066 213.0
BYD3_k127_635374_24 Belongs to the Nudix hydrolase family K01515 - 3.6.1.13 0.0000000000000000000000000000000000000000000000000000000002734 207.0
BYD3_k127_635374_25 Ceramidase - - - 0.00000000000000000000000000000000000000000000000000000000133 213.0
BYD3_k127_635374_26 Glutathione S-transferase, N-terminal domain K00799 - 2.5.1.18 0.0000000000000000000000000000000000000000000000000000004029 201.0
BYD3_k127_635374_27 subfamily IA, variant 1 K20862 - 3.1.3.102,3.1.3.104 0.00000000000000000000000000000000000000000000002065 181.0
BYD3_k127_635374_28 TPM domain K06872 - - 0.000000000000000000000000000000000000000003541 159.0
BYD3_k127_635374_29 Transcriptional regulator - - - 0.000000000000000000000000000000000000001232 149.0
BYD3_k127_635374_3 Homospermidine synthase K00808 - 2.5.1.44 1.135e-223 700.0
BYD3_k127_635374_30 Beta-lactamase - - - 0.00000000000000000000000000000000000003089 158.0
BYD3_k127_635374_31 - - - - 0.000000000000000000000000000000000002061 160.0
BYD3_k127_635374_32 Dual specificity phosphatase, catalytic domain - - - 0.000000000000000000000000000000005772 146.0
BYD3_k127_635374_33 - - - - 0.00000000000000000000000000000005222 133.0
BYD3_k127_635374_34 Uncharacterized ACR, COG1430 K09005 - - 0.00000000000000000000000000004079 124.0
BYD3_k127_635374_35 Domain of unknown function (DUF4166) - - - 0.00000000000000000000000000005572 124.0
BYD3_k127_635374_36 COG0724 RNA-binding proteins (RRM domain) - - - 0.0000000000000000000000000004239 117.0
BYD3_k127_635374_37 Late embryogenesis abundant protein - - - 0.00000000000741 74.0
BYD3_k127_635374_4 Superfamily I DNA and RNA helicases K03657 - 3.6.4.12 3.154e-223 714.0
BYD3_k127_635374_5 Catalyzes the biosynthesis of agmatine from arginine K01585 - 4.1.1.19 2.408e-202 655.0
BYD3_k127_635374_6 Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans K00975 - 2.7.7.27 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001644 545.0
BYD3_k127_635374_7 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water K00507 - 1.14.19.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002516 470.0
BYD3_k127_635374_8 Synthesizes alpha-1,4-glucan chains using ADP-glucose K00703 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002595 464.0
BYD3_k127_635374_9 Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues K01299 - 3.4.17.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004104 452.0
BYD3_k127_6480914_0 Belongs to the glycosyl hydrolase 67 family K01235 - 3.2.1.139 0.0 1025.0
BYD3_k127_6480914_1 Belongs to the IlvD Edd family K22186 - 4.2.1.82 2.622e-314 969.0
BYD3_k127_6480914_10 helix_turn _helix lactose operon repressor K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007887 439.0
BYD3_k127_6480914_11 Gluconolaconase K14274 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003274 370.0
BYD3_k127_6480914_12 NAD dependent epimerase/dehydratase family K22185 - 1.1.1.175 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002311 364.0
BYD3_k127_6480914_13 SapC - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004532 285.0
BYD3_k127_6480914_14 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000006305 258.0
BYD3_k127_6480914_15 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity - - - 0.000000000000000000000000000000000000000000000000002856 190.0
BYD3_k127_6480914_16 Domain of unknown function (DUF1851) - - - 0.0000000000000000000000000000000000006601 144.0
BYD3_k127_6480914_17 Stress responsive A/B Barrel Domain - - - 0.0000000000000000000000000000000002829 144.0
BYD3_k127_6480914_2 receptor - - - 2.046e-311 987.0
BYD3_k127_6480914_3 Aldehyde dehydrogenase K22187 - - 5.366e-222 696.0
BYD3_k127_6480914_4 Tryptophan halogenase K14266 - 1.14.19.9 4.405e-215 678.0
BYD3_k127_6480914_5 carboxymethylenebutenolidase activity K01061 - 3.1.1.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006279 541.0
BYD3_k127_6480914_6 PFAM Mannitol dehydrogenase K00040 - 1.1.1.57 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001503 525.0
BYD3_k127_6480914_7 fumarylacetoacetate (FAA) hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005747 507.0
BYD3_k127_6480914_8 Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family K08138 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004074 510.0
BYD3_k127_6480914_9 Cupin-like domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002767 482.0
BYD3_k127_6527845_0 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006485 646.0
BYD3_k127_6527845_1 WD40-like Beta Propeller Repeat - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004839 604.0
BYD3_k127_6527845_2 Glycosyl Hydrolase Family 88 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000221 417.0
BYD3_k127_6527845_3 Beta-xylanase K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000003572 293.0
BYD3_k127_6527845_4 pectinesterase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000002582 287.0
BYD3_k127_6527845_5 Belongs to the glycosyl hydrolase 2 family K05970 - 3.1.1.53 0.00000000000000000000000000000000000000000000000000000000000000000000004426 262.0
BYD3_k127_6527845_6 Translation Initiation Inhibitor YjgF Family - - - 0.00000000000000000000000000000000000000000000003727 175.0
BYD3_k127_6527845_7 Cytochrome c - - - 0.000000004375 58.0
BYD3_k127_6538609_0 Belongs to the FAD-dependent oxidoreductase 2 family. FRD SDH subfamily K00239 - 1.3.5.1,1.3.5.4 1.139e-309 959.0
BYD3_k127_6538609_1 Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner K03596 - - 1.506e-284 885.0
BYD3_k127_6538609_10 Belongs to the peptidase S26 family K03100 - 3.4.21.89 0.0000000000000000000000000000000000000000000000000000000000000000000000006583 263.0
BYD3_k127_6538609_11 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000000000000000000000000000000000000000000002718 244.0
BYD3_k127_6538609_12 Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism K03685 GO:0000287,GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016072,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019899,GO:0022613,GO:0032296,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043167,GO:0043169,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0071840,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 0.00000000000000000000000000000000000000000000000000000000000002869 223.0
BYD3_k127_6538609_13 Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA K02836 - - 0.000000000000000000000000000000000000000000000000000163 186.0
BYD3_k127_6538609_14 PFAM MucB RseB K03598 - - 0.0000000000000000000000000000000000000000000000000006826 200.0
BYD3_k127_6538609_15 COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain - - - 0.00000000000000000000000000000000000000000000006796 186.0
BYD3_k127_6538609_16 Involved in DNA repair and RecF pathway recombination K03584 - - 0.0000000000000000000000000000000000000000000000705 187.0
BYD3_k127_6538609_17 Belongs to the GcvT family K06980 - - 0.0000000000000000000000000000001321 138.0
BYD3_k127_6538609_18 Succinate dehydrogenase Fumarate reductase K00241 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.000000000000000000000000000004986 123.0
BYD3_k127_6538609_19 succinate dehydrogenase K00242 - - 0.000000000000000000000000006108 122.0
BYD3_k127_6538609_2 Belongs to the class-II aminoacyl-tRNA synthetase family K04567 - 6.1.1.6 2.831e-207 656.0
BYD3_k127_6538609_20 Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein K00997 - 2.7.8.7 0.00000000000000001431 96.0
BYD3_k127_6538609_21 alpha/beta hydrolase fold - - - 0.000000000000001063 89.0
BYD3_k127_6538609_22 Glutaredoxin-like domain (DUF836) K00384 - 1.8.1.9 0.000000000000148 73.0
BYD3_k127_6538609_23 Domain of unknown function (DUF4845) - - - 0.000000000002034 72.0
BYD3_k127_6538609_24 An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH and other flavinylated proteins as well K09159 GO:0006082,GO:0006105,GO:0008150,GO:0008152,GO:0009987,GO:0017144,GO:0019752,GO:0043436,GO:0043648,GO:0044237,GO:0044281,GO:0071704 - 0.0000000007142 65.0
BYD3_k127_6538609_25 Protein of unknown function (DUF1674) - - - 0.0000000642 61.0
BYD3_k127_6538609_26 Anti sigma-E protein RseA K03597 - - 0.00001898 55.0
BYD3_k127_6538609_3 Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA K03215 - 2.1.1.190 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 479.0
BYD3_k127_6538609_4 Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family K00240 - 1.3.5.1,1.3.5.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007734 452.0
BYD3_k127_6538609_5 Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide-linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N-acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides K01207 - 3.2.1.52 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006483 358.0
BYD3_k127_6538609_6 3'-5' exonuclease related to the exonuclease domain of PolB K07501 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000339 346.0
BYD3_k127_6538609_7 An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism K03595 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000356 318.0
BYD3_k127_6538609_8 Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate K03474 - 2.6.99.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003307 312.0
BYD3_k127_6538609_9 Provides the (R)-glutamate required for cell wall biosynthesis K01776 - 5.1.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001967 300.0
BYD3_k127_6557976_0 TonB dependent receptor K02014 - - 3.4e-248 792.0
BYD3_k127_6557976_1 Belongs to the iron ascorbate-dependent oxidoreductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002057 395.0
BYD3_k127_6557976_2 Amidinotransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000004398 263.0
BYD3_k127_6557976_3 Thymidine kinase K00857 GO:0003674,GO:0003824,GO:0004797,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006213,GO:0006259,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009120,GO:0009123,GO:0009124,GO:0009157,GO:0009162,GO:0009165,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0018130,GO:0019136,GO:0019205,GO:0019206,GO:0019438,GO:0019637,GO:0034641,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046104,GO:0046125,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0090304,GO:0090407,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.1.21 0.00000000000000000000000000000000000000000000000000000000000000000000001966 260.0
BYD3_k127_6557976_4 Acts both as a biotin-- acetyl-CoA-carboxylase ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio- 5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon K03524 - 6.3.4.15 0.0000000000000000000000000000000000000000000000000000000000000000002575 256.0
BYD3_k127_6557976_5 Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP K08591 - 2.3.1.15 0.00000000000000000000000000000000000000000001592 169.0
BYD3_k127_6557976_6 Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis K03525 - 2.7.1.33 0.000000000000000000000000000001786 133.0
BYD3_k127_6557976_7 Sporulation related domain - - - 0.0000001578 61.0
BYD3_k127_659692_0 Belongs to the IlvD Edd family K13875 - 4.2.1.25 2.495e-309 955.0
BYD3_k127_659692_1 Histidine kinase-like ATPases - - - 2.374e-256 837.0
BYD3_k127_659692_10 GGDEF domain - - - 0.000000000000000000000000000000000000000000000000000000000000000003111 245.0
BYD3_k127_659692_12 cheY-homologous receiver domain K02658 - - 0.0000000000000000000000000000000004233 134.0
BYD3_k127_659692_13 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.000000000000000000000000000000001539 151.0
BYD3_k127_659692_14 PFAM Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - 0.00000000000000000000000000000004297 146.0
BYD3_k127_659692_15 cheY-homologous receiver domain - - - 0.0000000000000000000000000001039 132.0
BYD3_k127_659692_16 Two component signalling adaptor domain - - - 0.000000000000000000000000002354 122.0
BYD3_k127_659692_17 HD domain K07814 - - 0.00000000000000000000003872 105.0
BYD3_k127_659692_18 Two component signalling adaptor domain K03408 - - 0.000000000000000001417 96.0
BYD3_k127_659692_2 alpha-L-arabinofuranosidase domain protein K01209 - 3.2.1.55 2.761e-252 787.0
BYD3_k127_659692_3 Beta-L-arabinofuranosidase, GH127 K09955 - - 2.283e-229 726.0
BYD3_k127_659692_4 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 1.325e-212 691.0
BYD3_k127_659692_5 Histidine kinase - - - 8.514e-208 689.0
BYD3_k127_659692_6 Methyl-accepting chemotaxis protein (MCP) signaling domain - - - 1.063e-194 636.0
BYD3_k127_659692_7 Periplasmic binding protein-like domain K02058,K10439 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004604 493.0
BYD3_k127_659692_8 Transcriptional regulator - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009575 431.0
BYD3_k127_659692_9 Converts alpha-aldose to the beta-anomer K01785 - 5.1.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005549 315.0
BYD3_k127_6631646_0 Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA K04066 - - 6.051e-211 679.0
BYD3_k127_6631646_1 The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane K00325 - 1.6.1.2 1.672e-194 617.0
BYD3_k127_6631646_10 - - - - 0.0000002124 57.0
BYD3_k127_6631646_2 NADP transhydrogenase K00324 - 1.6.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004498 436.0
BYD3_k127_6631646_3 HNH endonuclease - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000006672 279.0
BYD3_k127_6631646_4 TIGRFAM TIGR00645 family protein - - - 0.000000000000000000000000000000000000000000000000000000000000000005049 238.0
BYD3_k127_6631646_5 Psort location Cytoplasmic, score K14731 - 3.1.1.83 0.00000000000000000000000000000000000000000000000000000000001983 220.0
BYD3_k127_6631646_6 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.000000000000000000000000000000000000000000575 166.0
BYD3_k127_6631646_7 Cupin 2, conserved barrel domain protein K00971,K19547 - 2.7.7.13,5.3.3.19 0.000000000000000000000000000000000000000005464 159.0
BYD3_k127_6631646_8 NADP transhydrogenase K00324 - 1.6.1.2 0.00000000000000000000000000000000000000001277 154.0
BYD3_k127_6631646_9 Protein of unknown function (DUF3106) - - - 0.000000006767 65.0
BYD3_k127_6632586_0 Domain of unknown function (DUF4139) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 493.0
BYD3_k127_6632586_2 Response regulator of the LytR AlgR family K02477 - - 0.000000000000000000000000007703 111.0
BYD3_k127_6673163_0 Belongs to the heme-copper respiratory oxidase family K00404 - 1.9.3.1 1.48e-249 780.0
BYD3_k127_6673163_1 L-serine dehydratase K01752 - 4.3.1.17 8.067e-213 681.0
BYD3_k127_6673163_10 general stress protein - - - 0.00000000000000000000000000000000000000000000000000000000000408 215.0
BYD3_k127_6673163_11 - - - - 0.0000000000000000000000000000000000000000000004223 180.0
BYD3_k127_6673163_12 SNARE associated Golgi protein - - - 0.000000000000000000000000000000000000000008094 171.0
BYD3_k127_6673163_13 heavy metal translocating P-type ATPase K01533 - 3.6.3.4 0.0000000000000000000000000000000002459 135.0
BYD3_k127_6673163_14 Protein of unknown function (DUF4242) - - - 0.00000000000000000000000000000911 126.0
BYD3_k127_6673163_15 TIGRFAM cytochrome oxidase maturation protein, cbb3-type - - - 0.00000000000004705 73.0
BYD3_k127_6673163_16 Cbb3-type cytochrome oxidase K00407 - - 0.0000000000209 65.0
BYD3_k127_6673163_17 FixH family K09926 - - 0.000000003616 68.0
BYD3_k127_6673163_18 - - - - 0.0000001635 57.0
BYD3_k127_6673163_2 IG-like fold at C-terminal of FixG, putative oxidoreductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001005 574.0
BYD3_k127_6673163_20 Surface antigen - - - 0.000006674 55.0
BYD3_k127_6673163_21 - - - - 0.0008496 48.0
BYD3_k127_6673163_3 COG2217 Cation transport ATPase K01533 - 3.6.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 559.0
BYD3_k127_6673163_4 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004882 488.0
BYD3_k127_6673163_5 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002361 342.0
BYD3_k127_6673163_6 C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex K00406 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001223 327.0
BYD3_k127_6673163_7 Sugar (and other) transporter K03762 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009477 316.0
BYD3_k127_6673163_8 subunit II K00405 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000137 296.0
BYD3_k127_6673163_9 Beta-lactamase class C - - - 0.00000000000000000000000000000000000000000000000000000000000000000139 249.0
BYD3_k127_6813432_0 Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) K01662 - 2.2.1.7 4.39e-270 844.0
BYD3_k127_6813432_1 Cysteine-rich domain - - - 1.03e-201 637.0
BYD3_k127_6813432_10 PFAM Rubrerythrin - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000008071 258.0
BYD3_k127_6813432_11 Molybdenum ABC transporter K02020 - - 0.00000000000000000000000000000000000000000000000000000000000000000000001068 252.0
BYD3_k127_6813432_12 riboflavin synthase, alpha subunit K00793 - 2.5.1.9 0.00000000000000000000000000000000000000000000000000000000000005661 225.0
BYD3_k127_6813432_13 Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes K07738 GO:0000166,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0005488,GO:0005524,GO:0006355,GO:0008144,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0017076,GO:0019219,GO:0019222,GO:0030554,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0045892,GO:0045934,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0060255,GO:0065007,GO:0080090,GO:0097159,GO:0097367,GO:1901265,GO:1901363,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000006191 215.0
BYD3_k127_6813432_14 YqcI/YcgG family - - - 0.00000000000000000000000000000000000000000000000000000001296 221.0
BYD3_k127_6813432_15 Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin K00794 - 2.5.1.78 0.0000000000000000000000000000000000003478 150.0
BYD3_k127_6813432_16 Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons K03625 - - 0.0000000000000000000000000000000039 141.0
BYD3_k127_6813432_17 Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides K03602 - 3.1.11.6 0.0000000000000000007769 90.0
BYD3_k127_6813432_18 Protein of unknown function (DUF3501) - - - 0.0000001244 54.0
BYD3_k127_6813432_2 Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate K14652 - 3.5.4.25,4.1.99.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006483 476.0
BYD3_k127_6813432_3 Converts GTP to 7,8-dihydroneopterin triphosphate K09007 - 3.5.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000363 385.0
BYD3_k127_6813432_4 PFAM Phosphate-selective porin O and P K07221 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 387.0
BYD3_k127_6813432_5 Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate K11752 - 1.1.1.193,3.5.4.26 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002885 364.0
BYD3_k127_6813432_6 Cyclic nucleotide-monophosphate binding domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001179 357.0
BYD3_k127_6813432_7 Belongs to the FPP GGPP synthase family K00795,K13789 - 2.5.1.1,2.5.1.10,2.5.1.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001621 308.0
BYD3_k127_6813432_8 Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1 K00946 GO:0000166,GO:0000287,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0006725,GO:0006732,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0009030,GO:0009058,GO:0009108,GO:0009110,GO:0009228,GO:0009229,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0034641,GO:0035639,GO:0036094,GO:0042357,GO:0042364,GO:0042723,GO:0042724,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0046483,GO:0046872,GO:0051186,GO:0051188,GO:0071704,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 2.7.4.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001111 293.0
BYD3_k127_6813432_9 Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism K00600 - 2.1.2.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001623 271.0
BYD3_k127_6870653_0 sulphate transporter - - - 1.873e-196 635.0
BYD3_k127_6870653_1 Polyphosphate kinase 2 (PPK2) K22468 - 2.7.4.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004908 392.0
BYD3_k127_6870653_2 Arabinose-binding domain of AraC transcription regulator, N-term - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005546 342.0
BYD3_k127_6870653_3 Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose-6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor K00697 - 2.4.1.15,2.4.1.347 0.000000000000000000000000000000000000000000000000000000000005417 212.0
BYD3_k127_6870653_4 Response regulator receiver - - - 0.00000000000000002378 91.0
BYD3_k127_6901426_0 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase K03407 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002225 494.0
BYD3_k127_6901426_1 serine threonine protein kinase K11912,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000008406 209.0
BYD3_k127_6901426_2 cheY-homologous receiver domain - - - 0.00000000000000000000000001613 125.0
BYD3_k127_6985756_0 histidine kinase HAMP region domain protein K07716 - 2.7.13.3 0.0 2486.0
BYD3_k127_6985756_1 Peptidase, M28 - - - 3.393e-226 716.0
BYD3_k127_6985756_10 Pectate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000267 285.0
BYD3_k127_6985756_11 PFAM Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008178 284.0
BYD3_k127_6985756_12 PFAM lipopolysaccharide biosynthesis - - - 0.000000000000000000000000000000000000000000000000000000000000000000000001279 265.0
BYD3_k127_6985756_13 Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) K01912 - 6.2.1.30 0.0000000000000000000000000000000000000000000000000000000000002897 239.0
BYD3_k127_6985756_14 Glycosyltransferase Family 4 - - - 0.0000000000000000000000000000000000000000000000000000001954 209.0
BYD3_k127_6985756_15 polysaccharide export protein K01991 - - 0.00000000000000000000000000000000000000000000001801 192.0
BYD3_k127_6985756_16 AAA domain - - - 0.00000000000000000000000000000000000000000000003424 182.0
BYD3_k127_6985756_17 Beta-L-arabinofuranosidase, GH127 - - - 0.00000000000000001122 92.0
BYD3_k127_6985756_18 Putative beta-barrel porin 2 - - - 0.000000000000004028 87.0
BYD3_k127_6985756_19 -O-antigen K02847 - - 0.0000003067 63.0
BYD3_k127_6985756_2 Glycogen debranching enzyme - - - 2.487e-204 661.0
BYD3_k127_6985756_20 Acyl-CoA synthetase - - - 0.0008194 49.0
BYD3_k127_6985756_3 Heparinase II - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005224 608.0
BYD3_k127_6985756_4 UDP binding domain K00066 - 1.1.1.132 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002334 568.0
BYD3_k127_6985756_5 Glycosyl transferases group 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003614 547.0
BYD3_k127_6985756_6 two-component system sensor protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006657 539.0
BYD3_k127_6985756_7 histidine kinase A domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005557 475.0
BYD3_k127_6985756_8 TIGRFAM Undecaprenyl-phosphate glucose phosphotransferase K03606 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000203 430.0
BYD3_k127_6985756_9 Glycosyl transferases group 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 349.0
BYD3_k127_7053540_0 TIGRFAM FeS assembly protein SufB K09014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003543 497.0
BYD3_k127_7053540_1 FMN-dependent alpha-hydroxy acid dehydrogenase K00101 - 1.1.2.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 419.0
BYD3_k127_7053540_2 ABC-type transport system involved in resistance to organic solvents permease component K02066 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001098 269.0
BYD3_k127_7053540_3 ABC transporter K02065 - - 0.00000000000000000000000000000000000000000000000000000002408 205.0
BYD3_k127_7053540_4 transcriptional regulator - - - 0.00000000000000000000000000000000000001219 150.0
BYD3_k127_7053540_5 ABC-type transport system involved in resistance to organic solvents, periplasmic component K02067 - - 0.000000000000000000000000000000000000169 153.0
BYD3_k127_7053540_6 PFAM ABC transporter K02065 - - 0.000000000000000000000000000000001635 133.0
BYD3_k127_7053540_7 ABC-type transport system involved in resistance to organic solvents auxiliary component K07323 - - 0.000000000000000000000000000000004927 138.0
BYD3_k127_7053540_8 STAS domain K07122 - - 0.000001283 56.0
BYD3_k127_7053540_9 NUDIX domain K08310 - 3.6.1.67 0.00002146 55.0
BYD3_k127_7159378_0 transporter - - - 9.197e-260 816.0
BYD3_k127_7159378_1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit K02111 - 3.6.3.14 6.859e-247 770.0
BYD3_k127_7159378_10 COG1071 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001244 508.0
BYD3_k127_7159378_11 Pyruvate 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, beta subunit K00167 - 1.2.4.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000396 517.0
BYD3_k127_7159378_12 Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate K03417 - 4.1.3.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008036 429.0
BYD3_k127_7159378_13 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001663 399.0
BYD3_k127_7159378_14 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex K02115 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000277 386.0
BYD3_k127_7159378_15 class I DNA-(apurinic or apyrimidinic site) endonuclease activity K10563 - 3.2.2.23,4.2.99.18 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003341 377.0
BYD3_k127_7159378_16 Metallo-beta-lactamase superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001765 368.0
BYD3_k127_7159378_17 Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex K09699 - 2.3.1.168 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005344 378.0
BYD3_k127_7159378_18 PFAM Alcohol dehydrogenase K00344 - 1.6.5.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000776 369.0
BYD3_k127_7159378_19 Chromosome partitioning K03496 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002375 341.0
BYD3_k127_7159378_2 Angiotensin-converting enzyme K01283 - 3.4.15.1 1.651e-236 755.0
BYD3_k127_7159378_20 it plays a direct role in the translocation of protons across the membrane K02108 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 322.0
BYD3_k127_7159378_21 Belongs to the ParB family K03497 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003541 321.0
BYD3_k127_7159378_22 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides K03118 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000926 271.0
BYD3_k127_7159378_23 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000001744 235.0
BYD3_k127_7159378_24 Permeases of the drug metabolite transporter (DMT) superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000004388 237.0
BYD3_k127_7159378_25 rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality K07560 - - 0.0000000000000000000000000000000000000000000000000000002157 198.0
BYD3_k127_7159378_26 Protein of unknown function (DUF3014) - - - 0.000000000000000000000000000000000000000000000000000003839 200.0
BYD3_k127_7159378_27 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000002962 194.0
BYD3_k127_7159378_28 Specifically methylates the N7 position of guanine in position 527 of 16S rRNA K03501 - 2.1.1.170 0.000000000000000000000000000000000000000000001137 173.0
BYD3_k127_7159378_29 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02113 - - 0.0000000000000000000000000000000000000000001144 169.0
BYD3_k127_7159378_3 Dehydrogenase K00117 - 1.1.5.2 3.042e-228 726.0
BYD3_k127_7159378_30 cytochrome - - - 0.000000000000000000000000000000000000000005415 162.0
BYD3_k127_7159378_31 PFAM small multidrug resistance protein K11741 - - 0.000000000000000000000000000000000000004214 148.0
BYD3_k127_7159378_32 F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation K02110 - - 0.0000000000000000000000000000000000001118 143.0
BYD3_k127_7159378_33 Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) K02109 - - 0.000000000000000000000000000000000004019 142.0
BYD3_k127_7159378_34 Predicted integral membrane protein (DUF2269) - - - 0.000000000000000000000000000354 119.0
BYD3_k127_7159378_35 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation K03117 - - 0.00000000001591 71.0
BYD3_k127_7159378_36 PFAM ATP synthase I chain K02116 GO:0003674,GO:0003824,GO:0005215,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044769,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - 0.00000000002262 70.0
BYD3_k127_7159378_37 Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system K03116,K03425 GO:0002790,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006886,GO:0008104,GO:0008150,GO:0008565,GO:0009306,GO:0009987,GO:0015031,GO:0015833,GO:0016020,GO:0016021,GO:0031224,GO:0031226,GO:0032940,GO:0032991,GO:0033036,GO:0033281,GO:0034613,GO:0042886,GO:0044425,GO:0044459,GO:0044464,GO:0045184,GO:0046903,GO:0046907,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0070727,GO:0071702,GO:0071705,GO:0071944,GO:0098796,GO:0098797 - 0.0000000009636 63.0
BYD3_k127_7159378_4 2-methylcitrate dehydratase K01720 - 4.2.1.79 2.486e-214 675.0
BYD3_k127_7159378_5 Belongs to the citrate synthase family K01659 - 2.3.3.5 5.04e-198 634.0
BYD3_k127_7159378_6 Transporter K03305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001507 609.0
BYD3_k127_7159378_7 Dienelactone hydrolase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005284 619.0
BYD3_k127_7159378_8 Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family K00383 - 1.8.1.7 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002805 540.0
BYD3_k127_7159378_9 Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits K02112 - 3.6.3.14 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 504.0
BYD3_k127_7188394_0 Bacterial flagellin C-terminal helical region K02406 - - 3.666e-218 693.0
BYD3_k127_7188394_1 Fis family transcriptional regulator K10941 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003063 420.0
BYD3_k127_7188394_2 Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end K02407 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000001272 295.0
BYD3_k127_7188394_3 flagellar protein FliS K02422 - - 0.000000000000000000000000000001065 127.0
BYD3_k127_7188394_4 Atypical PilZ domain, cyclic di-GMP receptor - - - 0.00000000000000000007383 96.0
BYD3_k127_7188394_5 FlaG protein K06603 - - 0.000000001097 64.0
BYD3_k127_7188646_0 oxidoreductase K07222 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001439 546.0
BYD3_k127_7188646_1 OsmC-like protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000571 275.0
BYD3_k127_7188646_2 Belongs to the UPF0312 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000002154 248.0
BYD3_k127_7188646_3 - - - - 0.00000000000000000000000000000000001273 151.0
BYD3_k127_7188646_4 COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases - - - 0.00000000000000000000000000000000006499 151.0
BYD3_k127_7236223_0 Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE K03695 - - 0.0 1279.0
BYD3_k127_7236223_1 Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain K01872 GO:0001130,GO:0001131,GO:0001141,GO:0001217,GO:0002161,GO:0002196,GO:0003674,GO:0003700,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006355,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006450,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009451,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010629,GO:0016070,GO:0016597,GO:0016787,GO:0016788,GO:0016874,GO:0016875,GO:0019219,GO:0019222,GO:0019538,GO:0019752,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0042802,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0045892,GO:0045934,GO:0046483,GO:0046872,GO:0046914,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051252,GO:0051253,GO:0052689,GO:0060255,GO:0065007,GO:0065008,GO:0071704,GO:0080090,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:0140110,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:2000112,GO:2000113,GO:2001141 6.1.1.7 0.0 1080.0
BYD3_k127_7236223_10 Responsible for synthesis of pseudouridine from uracil K06180 - 5.4.99.23 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001403 369.0
BYD3_k127_7236223_11 Amidohydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000101 305.0
BYD3_k127_7236223_12 Tetratricopeptide repeats K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000115 291.0
BYD3_k127_7236223_13 ZIP Zinc transporter K16267 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000004453 275.0
BYD3_k127_7236223_14 LysR substrate binding domain - GO:0003674,GO:0003676,GO:0003677,GO:0003700,GO:0005488,GO:0006139,GO:0006351,GO:0006355,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0016070,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0031323,GO:0031326,GO:0032774,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0046483,GO:0050789,GO:0050794,GO:0051171,GO:0051252,GO:0060255,GO:0065007,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0140110,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1903506,GO:2000112,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000008218 273.0
BYD3_k127_7236223_15 Belongs to the multicopper oxidase YfiH RL5 family K05810 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001324 269.0
BYD3_k127_7236223_16 NAD(P)H-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000000001986 246.0
BYD3_k127_7236223_17 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000000004135 246.0
BYD3_k127_7236223_18 Thiol disulfide interchange protein K03673 - - 0.00000000000000000000000000000000000000000000000000000000000000002385 231.0
BYD3_k127_7236223_19 Transcriptional regulatory protein, C terminal - - - 0.000000000000000000000000000000000000000000000000000000000000001569 243.0
BYD3_k127_7236223_2 that it carries out the mismatch recognition step. This protein has a weak ATPase activity K03555 - - 1.33e-322 1012.0
BYD3_k127_7236223_20 long-chain fatty acid transport protein - - - 0.000000000000000000000000000000000000000000000000000000000005061 216.0
BYD3_k127_7236223_21 cAMP biosynthetic process K08282,K12132 - 2.7.11.1 0.0000000000000000000000000000000000000000000000000000000002578 223.0
BYD3_k127_7236223_22 Carboxylesterase family K03929 - - 0.000000000000000000000000000000000000000000000000000000001317 206.0
BYD3_k127_7236223_23 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K05807 - - 0.000000000000000000000000000000000000000000000000000000008299 207.0
BYD3_k127_7236223_24 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000000000000001576 201.0
BYD3_k127_7236223_25 cAMP biosynthetic process - - - 0.00000000000000000000000000000000000000000000000000002649 211.0
BYD3_k127_7236223_26 Belongs to the CinA family K03743 - 3.5.1.42 0.000000000000000000000000000000000000000000000006793 178.0
BYD3_k127_7236223_27 Alpha/beta hydrolase family - - - 0.0000000000000000000000000000000000000000000000082 179.0
BYD3_k127_7236223_28 Bacterial regulatory proteins, tetR family - - - 0.000000000000000000000000000000000000000003695 161.0
BYD3_k127_7236223_29 Belongs to the HpcH HpaI aldolase family K02510 - 4.1.2.52 0.000000000000000000000000000000000000001615 160.0
BYD3_k127_7236223_3 Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) K01876 - 6.1.1.12 3.275e-261 816.0
BYD3_k127_7236223_30 acetyltransferase - - - 0.0000000000000000000000000000000003237 138.0
BYD3_k127_7236223_31 Modulates RecA activity K03565 - - 0.00000000000000000000000000006319 123.0
BYD3_k127_7236223_32 - - - - 0.00000000000000000000000000273 121.0
BYD3_k127_7236223_33 Protein of unknown function (DUF2628) - - - 0.00000000000000000000000002653 120.0
BYD3_k127_7236223_34 Could accelerate the degradation of some genes transcripts potentially through selective RNA binding K03563 - - 0.000000000000000000000005133 104.0
BYD3_k127_7236223_35 Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester K01975 - 3.1.4.58 0.0000000000000000000001637 105.0
BYD3_k127_7236223_36 Regulatory protein, FmdB family - - - 0.000000000000000000001607 100.0
BYD3_k127_7236223_37 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.0000197 50.0
BYD3_k127_7236223_4 Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage K03553 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002692 552.0
BYD3_k127_7236223_5 Belongs to the aspartokinase family K00928 - 2.7.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007264 479.0
BYD3_k127_7236223_6 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000136 493.0
BYD3_k127_7236223_7 Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007223 478.0
BYD3_k127_7236223_8 serves to protect cells from the toxic effects of hydrogen peroxide K03781 - 1.11.1.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004153 466.0
BYD3_k127_7236223_9 Patatin-like phospholipase K07001 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006686 425.0
BYD3_k127_7416007_0 long-chain fatty acid transport protein - - - 0.0 1400.0
BYD3_k127_7416007_1 Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle K01596 - 4.1.1.32 4.505e-277 863.0
BYD3_k127_7416007_10 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000000000000000000000000000000003565 234.0
BYD3_k127_7416007_11 Adenylate cyclase - - - 0.000000000000000000000000000000000000000000000000000000000000002666 228.0
BYD3_k127_7416007_12 thiolester hydrolase activity K06889 - - 0.00000000000000000000000000000000000000000000000003895 189.0
BYD3_k127_7416007_13 TIGRFAM conserved repeat domain - - - 0.0000000000000000000000000000000000001203 156.0
BYD3_k127_7416007_14 Adenylate cyclase - - - 0.000000000000000000000000001864 125.0
BYD3_k127_7416007_15 Domain of unknown function DUF11 - - - 0.0000000000000000000003419 102.0
BYD3_k127_7416007_2 poly(R)-hydroxyalkanoic acid synthase K03821 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 559.0
BYD3_k127_7416007_3 methyltransferase small - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 507.0
BYD3_k127_7416007_4 aminopeptidase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000725 424.0
BYD3_k127_7416007_5 Belongs to the pseudouridine synthase RsuA family K06182 - 5.4.99.21 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003113 393.0
BYD3_k127_7416007_6 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002211 393.0
BYD3_k127_7416007_7 HELICc2 K03722 - 3.6.4.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 349.0
BYD3_k127_7416007_8 Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs K05539 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008594 339.0
BYD3_k127_7416007_9 poly(3-hydroxyalkanoate) depolymerase K22250 - 3.1.1.76 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001807 308.0
BYD3_k127_7571417_0 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain - - - 7.556e-266 850.0
BYD3_k127_7571417_1 Thiamine pyrophosphate enzyme, central domain K00156,K00158 - 1.2.3.3,1.2.5.1 2.681e-207 662.0
BYD3_k127_7571417_10 Hemerythrin - - - 0.000000000000000000000000000000000000000000000009436 178.0
BYD3_k127_7571417_11 Lecithin retinol acyltransferase - - - 0.00000000000000000000000000000000000002654 149.0
BYD3_k127_7571417_12 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides K08281 GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006208,GO:0006212,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009112,GO:0009987,GO:0017144,GO:0019860,GO:0034641,GO:0042737,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044424,GO:0044464,GO:0046113,GO:0046483,GO:0046700,GO:0055086,GO:0071704,GO:0072527,GO:0072529,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575 3.5.1.19 0.00000000000000000000000000000001906 133.0
BYD3_k127_7571417_15 epoxide hydrolase - - - 0.00000005527 57.0
BYD3_k127_7571417_2 Belongs to the glycosyl hydrolase 13 family K01214 - 3.2.1.68 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001733 555.0
BYD3_k127_7571417_3 Alpha/beta hydrolase family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007757 512.0
BYD3_k127_7571417_4 Sodium/hydrogen exchanger family K03316 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002382 489.0
BYD3_k127_7571417_5 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004128 393.0
BYD3_k127_7571417_6 Cytochrome P460 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000003937 259.0
BYD3_k127_7571417_7 response regulator K02479 - - 0.00000000000000000000000000000000000000000000000000000000000000008734 228.0
BYD3_k127_7571417_8 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000000000002188 218.0
BYD3_k127_7571417_9 - - - - 0.000000000000000000000000000000000000000000000000004584 187.0
BYD3_k127_7656919_0 outer membrane autotransporter barrel - - - 0.0 2108.0
BYD3_k127_7656919_1 Bacterial DNA polymerase III alpha subunit K14162 - 2.7.7.7 0.0 1137.0
BYD3_k127_7656919_10 secretion system protein K02453 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004014 488.0
BYD3_k127_7656919_11 alanine dehydrogenase K00259 - 1.4.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006472 444.0
BYD3_k127_7656919_12 General secretion pathway protein F K02455 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002092 436.0
BYD3_k127_7656919_13 helix_turn_helix, arabinose operon control protein K13652 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003751 336.0
BYD3_k127_7656919_14 Peptidogalycan biosysnthesis/recognition K09919 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005028 339.0
BYD3_k127_7656919_15 Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine K00684 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008914,GO:0016740,GO:0016746,GO:0016755,GO:0016787,GO:0019538,GO:0043170,GO:0044238,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564 2.3.2.6 0.000000000000000000000000000000000000000000000000000000000000000000000000000000003077 279.0
BYD3_k127_7656919_16 helix_turn_helix, Lux Regulon - - - 0.00000000000000000000000000000000000000000000000000000000001906 213.0
BYD3_k127_7656919_17 Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane) K03634 - - 0.00000000000000000000000000000000000000000006819 170.0
BYD3_k127_7656919_18 Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation K06891 - - 0.0000000000000000000000000000000000000002919 151.0
BYD3_k127_7656919_19 Type II secretion system protein C - - - 0.00000000000000000000000000000000000687 149.0
BYD3_k127_7656919_2 Belongs to the ClpA ClpB family K03694 - - 0.0 1030.0
BYD3_k127_7656919_20 One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex K02518 GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - 0.00000000000000000000000000000001389 132.0
BYD3_k127_7656919_21 Important for reducing fluoride concentration in the cell, thus reducing its toxicity K06199 GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006810,GO:0006811,GO:0006820,GO:0008150,GO:0008509,GO:0015075,GO:0015103,GO:0015318,GO:0015698,GO:0016020,GO:0016021,GO:0022857,GO:0031224,GO:0031226,GO:0034220,GO:0044425,GO:0044459,GO:0044464,GO:0051179,GO:0051234,GO:0055085,GO:0071944,GO:0098656,GO:0098660,GO:0098661,GO:1903424,GO:1903425 - 0.000000000000000000104 94.0
BYD3_k127_7656919_22 VanZ like family - - - 0.0000000001466 67.0
BYD3_k127_7656919_23 COG1961 Site-specific recombinases, DNA invertase Pin homologs - - - 0.00006735 46.0
BYD3_k127_7656919_3 Cellulose binding domain K01179,K05988 - 3.2.1.11,3.2.1.4 1.122e-300 958.0
BYD3_k127_7656919_4 DNA segregation ATPase FtsK SpoIIIE K03466 - - 2.293e-272 858.0
BYD3_k127_7656919_5 Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB K02454 - - 2.711e-202 641.0
BYD3_k127_7656919_6 Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec) K01875 - 6.1.1.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005578 569.0
BYD3_k127_7656919_7 AAA ATPase, central domain protein K07478 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 565.0
BYD3_k127_7656919_8 Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family K00384 - 1.8.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006868 485.0
BYD3_k127_7656919_9 His Kinase A (phosphoacceptor) domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001808 498.0
BYD3_k127_779293_0 Protein of unknown function (DUF1624) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002726 504.0
BYD3_k127_779293_1 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001824 416.0
BYD3_k127_779293_10 TupA-like ATPgrasp - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000168 285.0
BYD3_k127_779293_11 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000003573 245.0
BYD3_k127_779293_12 HupE / UreJ protein - - - 0.000000000000000000000000000000000000000000000000000000000000000008041 238.0
BYD3_k127_779293_13 helix_turn_helix, Lux Regulon - - - 0.0000000000000000000000000000000000000000000000000000009589 200.0
BYD3_k127_779293_14 mRNA catabolic process - - - 0.00000000000000000000000000000000000000000000000002307 184.0
BYD3_k127_779293_15 Histidine kinase - - - 0.000000000000000000000000000000000000000000000001075 201.0
BYD3_k127_779293_16 SmpA / OmlA family - - - 0.00000000000000000000000000000000000000000001118 169.0
BYD3_k127_779293_17 Histidine kinase K10125,K13924 - 2.1.1.80,2.7.13.3,3.1.1.61 0.0000000000000000000000000000000000000000006458 182.0
BYD3_k127_779293_18 NNMT/PNMT/TEMT family - - - 0.00000000000000000000000000000000000000002821 164.0
BYD3_k127_779293_19 PFAM AsmA family protein K07289 - - 0.00000000000000000000000000000000000001256 160.0
BYD3_k127_779293_2 Amino acid permease K11735 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001132 420.0
BYD3_k127_779293_20 Sigma-70, region 4 - - - 0.000000000000000000000000000000000005346 145.0
BYD3_k127_779293_21 Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes - - - 0.0000000000000000000000000000000000182 139.0
BYD3_k127_779293_22 ECF sigma factor K03088 - - 0.000000000000000000000000000000003985 136.0
BYD3_k127_779293_23 Putative adhesin - - - 0.000000000000000000000000000001776 137.0
BYD3_k127_779293_24 Sugar efflux transporter for intercellular exchange K15383 - - 0.00000000000000000000000003338 117.0
BYD3_k127_779293_25 Haemolysin secretion/activation protein ShlB/FhaC/HecB - - - 0.00000000000000000000000689 117.0
BYD3_k127_779293_26 Tetratricopeptide repeat - - - 0.000000000000000002431 97.0
BYD3_k127_779293_27 FecR protein - - - 0.000000000000000004886 98.0
BYD3_k127_779293_28 Protein of unknown function (DUF3187) - - - 0.0000000000003548 81.0
BYD3_k127_779293_3 Alpha beta hydrolase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004151 391.0
BYD3_k127_779293_4 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006574 396.0
BYD3_k127_779293_5 Berberine and berberine like - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001393 372.0
BYD3_k127_779293_6 TIGRFAM A G-specific adenine glycosylase K03575 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004508 367.0
BYD3_k127_779293_7 Serine aminopeptidase, S33 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004808 340.0
BYD3_k127_779293_8 Berberine and berberine like - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001893 344.0
BYD3_k127_779293_9 ABC transporter - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001036 304.0
BYD3_k127_7845022_0 TrkA-C domain - - - 8.842e-227 717.0
BYD3_k127_7845022_1 Benzoate membrane transport protein K05782 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001631 500.0
BYD3_k127_7845022_2 Predicted integral membrane protein (DUF2270) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004353 236.0
BYD3_k127_7845022_3 phosphorelay signal transduction system K02477,K07705,K21696 GO:0000156,GO:0000160,GO:0003674,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0023052,GO:0035556,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007 - 0.00000000000000000000000000000000000000000000000000000000000001402 223.0
BYD3_k127_7845022_4 glyoxalase III activity - - - 0.00000000000000000000000000000000000000000000000000000003647 206.0
BYD3_k127_7845022_5 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000002113 214.0
BYD3_k127_7845022_6 Ion channel - - - 0.00000000000000000000000000000000000000004116 157.0
BYD3_k127_7845022_7 Acyltransferase family - - - 0.000000000000000000000001711 109.0
BYD3_k127_7913339_0 type IV pilus secretin PilQ K02666 - - 4.756e-197 637.0
BYD3_k127_7913339_1 Phosphohydrolase-associated domain K01129 - 3.1.5.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004781 471.0
BYD3_k127_7913339_2 Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) K01735 - 4.2.3.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002682 439.0
BYD3_k127_7913339_3 Pilus assembly protein K02662 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002135 364.0
BYD3_k127_7913339_4 Pilus assembly protein, PilO K02664 - - 0.0000000000000000000000000000000000000000000000000000000002359 209.0
BYD3_k127_7913339_5 PFAM glycosyl transferase, family 51 K05366 GO:0000270,GO:0003674,GO:0003824,GO:0004180,GO:0004185,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008360,GO:0008658,GO:0008955,GO:0009002,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016020,GO:0016021,GO:0016740,GO:0016757,GO:0016758,GO:0016787,GO:0017171,GO:0019538,GO:0022603,GO:0022604,GO:0030203,GO:0031224,GO:0031226,GO:0031406,GO:0033218,GO:0033293,GO:0034645,GO:0036094,GO:0042221,GO:0042546,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046677,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051128,GO:0065007,GO:0065008,GO:0070008,GO:0070011,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0097159,GO:0140096,GO:1901135,GO:1901137,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681 2.4.1.129,3.4.16.4 0.000000000000000000000000000000000000000000000003474 179.0
BYD3_k127_7913339_6 Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate K00891 GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009423,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046417,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 0.00000000000000000000000000000000000000000000001384 177.0
BYD3_k127_7913339_7 PFAM Fimbrial assembly K02663 - - 0.000000000000000000000000000000000000000000001394 172.0
BYD3_k127_7913339_8 pilus assembly protein pilp K02665 - - 0.00000000000000000000000000000000000001129 154.0
BYD3_k127_7949042_0 Tryptophan halogenase K14266 - 1.14.19.9 2.757e-205 661.0
BYD3_k127_7949042_1 Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring K03590 GO:0000166,GO:0003674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0008144,GO:0008150,GO:0009898,GO:0009987,GO:0016020,GO:0017076,GO:0030554,GO:0032153,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042802,GO:0043167,GO:0043168,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0051301,GO:0071944,GO:0097159,GO:0097367,GO:0098552,GO:0098562,GO:1901265,GO:1901363 - 3.221e-202 638.0
BYD3_k127_7949042_10 Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) K01925 - 6.3.2.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008456 442.0
BYD3_k127_7949042_11 Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein K01929 GO:0000270,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0008766,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0030203,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0047480,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 6.3.2.10 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004381 401.0
BYD3_k127_7949042_12 Peptidoglycan polymerase that is essential for cell division K03588 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001046 375.0
BYD3_k127_7949042_13 Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) K02563 - 2.4.1.227 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001479 365.0
BYD3_k127_7949042_14 Cell wall formation K01921 - 6.3.2.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000224 359.0
BYD3_k127_7949042_15 MraW methylase family K03438 - 2.1.1.199 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000132 333.0
BYD3_k127_7949042_16 Tryptophan halogenase K14266 - 1.14.19.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001366 315.0
BYD3_k127_7949042_17 Cell wall formation K00075 - 1.3.1.98 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 302.0
BYD3_k127_7949042_18 Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA K07056 - 2.1.1.198 0.00000000000000000000000000000000000000000000000000000000000000000000000000000003313 279.0
BYD3_k127_7949042_19 lipoprotein K07121 GO:0000270,GO:0003674,GO:0005575,GO:0005623,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009279,GO:0009987,GO:0016020,GO:0019867,GO:0030203,GO:0030234,GO:0030312,GO:0030313,GO:0031241,GO:0031975,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044462,GO:0044464,GO:0050790,GO:0065007,GO:0065009,GO:0070589,GO:0071554,GO:0071704,GO:0071840,GO:0071944,GO:0098552,GO:0098772,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576 - 0.000000000000000000000000000000000000000000000000000000000000001411 246.0
BYD3_k127_7949042_2 Tryptophan halogenase K14266 - 1.14.19.9 6.273e-200 636.0
BYD3_k127_7949042_20 MraZ protein, putative antitoxin-like K03925 - - 0.000000000000000000000000000000000000000000000000000109 189.0
BYD3_k127_7949042_21 - - - - 0.00000000000000000000000000000000000000000000001883 175.0
BYD3_k127_7949042_22 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly K03589 - - 0.00000000000000000000000000000000002541 154.0
BYD3_k127_7949042_23 - - - - 0.000000000000002017 83.0
BYD3_k127_7949042_24 Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic K03586 - - 0.00000000000007318 81.0
BYD3_k127_7949042_25 Belongs to the UPF0102 family K07460 - - 0.0000000000006961 72.0
BYD3_k127_7949042_3 Catalyzes cross-linking of the peptidoglycan cell wall at the division septum K03587 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001928 579.0
BYD3_k127_7949042_4 Belongs to the MurCDEF family K01924 - 6.3.2.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 578.0
BYD3_k127_7949042_5 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan K01000 - 2.7.8.13 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001115 515.0
BYD3_k127_7949042_6 Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity K03531 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002821 505.0
BYD3_k127_7949042_7 Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis K02535 - 3.5.1.108 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001282 467.0
BYD3_k127_7949042_8 Tryptophan halogenase K14266 - 1.14.19.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007794 439.0
BYD3_k127_7949042_9 Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan K01928 - 6.3.2.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003088 440.0
BYD3_k127_7968397_0 Orn/Lys/Arg decarboxylase, N-terminal domain K01581 - 4.1.1.17 0.0 1116.0
BYD3_k127_7968397_1 PFAM Orn Lys Arg decarboxylase major region K01582,K01584 - 4.1.1.18,4.1.1.19 0.0 1012.0
BYD3_k127_7968397_10 Amino acid permease K03756,K03759 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006226 418.0
BYD3_k127_7968397_11 transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004028 421.0
BYD3_k127_7968397_12 secretion protein HlyD family - GO:0005575,GO:0005623,GO:0005886,GO:0006950,GO:0006974,GO:0008150,GO:0009987,GO:0016020,GO:0033554,GO:0044464,GO:0050896,GO:0051716,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001271 401.0
BYD3_k127_7968397_13 Metallo-beta-lactamase superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008619 404.0
BYD3_k127_7968397_14 Lytic polysaccharide mono-oxygenase, cellulose-degrading K03933 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001518 405.0
BYD3_k127_7968397_15 Sodium calcium exchanger membrane K07300 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 396.0
BYD3_k127_7968397_16 TIGRFAM RND efflux system, outer membrane lipoprotein, NodT family K18139 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009407 373.0
BYD3_k127_7968397_17 Phosphate-selective porin O and P K07221 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002736 359.0
BYD3_k127_7968397_18 Protein of unknown function (DUF1254) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001243 341.0
BYD3_k127_7968397_19 COG4149 ABC-type molybdate transport system, permease component K02018 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000001791 300.0
BYD3_k127_7968397_2 PQQ enzyme repeat K00117 - 1.1.5.2 8.605e-262 831.0
BYD3_k127_7968397_20 Protein involved in meta-pathway of phenol degradation - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 299.0
BYD3_k127_7968397_21 AI-2E family transporter - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000001715 309.0
BYD3_k127_7968397_22 Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system K02017 - 3.6.3.29 0.00000000000000000000000000000000000000000000000000000000000000000000000000000001148 307.0
BYD3_k127_7968397_23 Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine K07304 - 1.8.4.11 0.000000000000000000000000000000000000000000000000000000000000000000000000000005626 285.0
BYD3_k127_7968397_24 PFAM ATP-binding region, ATPase domain protein K02482,K10819 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000005214 269.0
BYD3_k127_7968397_25 Transcriptional regulator K03566 - - 0.0000000000000000000000000000000000000000000000000000000000000000001393 243.0
BYD3_k127_7968397_26 Zinc-binding dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000003159 239.0
BYD3_k127_7968397_27 Domain of Unknown Function (DUF748) - - - 0.00000000000000000000000000000000000000000000000000000000000000004868 240.0
BYD3_k127_7968397_28 membrane - - - 0.00000000000000000000000000000000000000000000000000000000000000006151 229.0
BYD3_k127_7968397_29 PFAM Methionine sulfoxide reductase B K07305 - 1.8.4.12 0.000000000000000000000000000000000000000000000000000000000003507 228.0
BYD3_k127_7968397_3 TrkA-N domain K03455 - - 3.373e-214 680.0
BYD3_k127_7968397_30 Protein of unknown function (DUF2950) - - - 0.000000000000000000000000000000000000000000000000000000000006443 222.0
BYD3_k127_7968397_31 membrane K07278 - - 0.0000000000000000000000000000000000000000000000000000000001994 224.0
BYD3_k127_7968397_32 Bacterial periplasmic substrate-binding proteins K02030 - - 0.0000000000000000000000000000000000000000000000000002381 198.0
BYD3_k127_7968397_33 Orn/Lys/Arg decarboxylase, N-terminal domain K01581 - 4.1.1.17 0.000000000000000000000000000000000000000000000000003116 186.0
BYD3_k127_7968397_34 Lipoprotein - - - 0.0000000000000000000000000000000000000000000000005868 182.0
BYD3_k127_7968397_35 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000002385 195.0
BYD3_k127_7968397_36 Glutaminase K01425 - 3.5.1.2 0.00000000000000000000000000000000000000000000000858 184.0
BYD3_k127_7968397_37 Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane - - - 0.00000000000000000000000000000000000000003967 175.0
BYD3_k127_7968397_38 PFAM Ion transport 2 - - - 0.0000000000000000000000000000000000000001671 169.0
BYD3_k127_7968397_39 Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine K01579 - 4.1.1.11 0.000000000000000000000000000000000000004076 149.0
BYD3_k127_7968397_4 Amino acid permease K03756,K03759 - - 1.091e-209 659.0
BYD3_k127_7968397_40 Protein of unknown function (DUF3313) - - - 0.0000000000000000000000000000000000006074 149.0
BYD3_k127_7968397_41 Sortase family K07284 - 3.4.22.70 0.000000000000000000000000000000000003617 151.0
BYD3_k127_7968397_42 Outer membrane protein beta-barrel domain - - - 0.000000000000000000000000000000000004691 146.0
BYD3_k127_7968397_43 Cupin superfamily (DUF985) K09705 - - 0.00000000000000000000000000000000004074 142.0
BYD3_k127_7968397_44 Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - 0.0000000000000000000000000000000205 141.0
BYD3_k127_7968397_46 Adenylate cyclase - - - 0.000000000000000000000000004492 123.0
BYD3_k127_7968397_47 Cellulose 1,4-beta-cellobiosidase - - - 0.0000000000000000000000001067 124.0
BYD3_k127_7968397_48 cheY-homologous receiver domain - - - 0.000000000000000000002192 108.0
BYD3_k127_7968397_49 - - - - 0.00000000000000000001068 101.0
BYD3_k127_7968397_5 Pathogenicity protein K09800 - - 1.954e-200 672.0
BYD3_k127_7968397_51 COG0188 Type IIA topoisomerase (DNA gyrase topo II, topoisomerase IV), A subunit - - - 0.000000000000001736 82.0
BYD3_k127_7968397_52 His Kinase A (phosphoacceptor) domain - - - 0.00000000001383 76.0
BYD3_k127_7968397_53 - - - - 0.000002363 60.0
BYD3_k127_7968397_6 Transport of potassium into the cell - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001969 546.0
BYD3_k127_7968397_7 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001409 474.0
BYD3_k127_7968397_8 Sulfate ABC transporter, periplasmic sulfate-binding protein K02048 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009269 442.0
BYD3_k127_7968397_9 cytochrome c biogenesis protein - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000698 432.0
BYD3_k127_8000246_0 Formate dehydrogenase, alpha subunit K00123 - 1.17.1.9 0.0 1399.0
BYD3_k127_8000246_1 Belongs to the glycosyl hydrolase 13 family - - - 0.0 1148.0
BYD3_k127_8000246_10 Alpha-amylase domain - - - 5.108e-250 784.0
BYD3_k127_8000246_11 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding K00124 - - 8.489e-234 741.0
BYD3_k127_8000246_12 Major facilitator superfamily K16211 - - 4.141e-210 665.0
BYD3_k127_8000246_13 Belongs to the xylose isomerase family K01805 - 5.3.1.5 9.731e-208 653.0
BYD3_k127_8000246_14 Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme K00789 - 2.5.1.6 3.368e-204 640.0
BYD3_k127_8000246_15 Tryptophan halogenase K14266 - 1.14.19.9 6.407e-198 628.0
BYD3_k127_8000246_16 Aldehyde dehydrogenase family K21802 - 1.2.1.67 1.87e-197 627.0
BYD3_k127_8000246_17 FGGY family of carbohydrate kinases, C-terminal domain K00854 - 2.7.1.17 4.763e-197 627.0
BYD3_k127_8000246_18 3-hydroxyacyl-coa dehydrogenase - - - 5.392e-197 636.0
BYD3_k127_8000246_19 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain K01652 - 2.2.1.6 1.796e-195 627.0
BYD3_k127_8000246_2 receptor K02014 - - 2.2e-306 966.0
BYD3_k127_8000246_20 belongs to the aldehyde dehydrogenase family K00146 - 1.2.1.39 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005293 601.0
BYD3_k127_8000246_21 Aldehyde dehydrogenase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002547 599.0
BYD3_k127_8000246_22 Amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001048 592.0
BYD3_k127_8000246_23 Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols K04099,K04101 GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0006082,GO:0006725,GO:0008150,GO:0008152,GO:0008198,GO:0009056,GO:0009987,GO:0016054,GO:0016491,GO:0016701,GO:0016702,GO:0017144,GO:0018918,GO:0018958,GO:0019336,GO:0019396,GO:0019439,GO:0019752,GO:0032787,GO:0036238,GO:0042537,GO:0042737,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046395,GO:0046872,GO:0046914,GO:0051213,GO:0055114,GO:0071704,GO:0072329,GO:1901360,GO:1901361,GO:1901575,GO:1901615,GO:1901616 1.13.11.57,1.13.11.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001104 584.0
BYD3_k127_8000246_24 Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate K00108 - 1.1.99.1 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005268 578.0
BYD3_k127_8000246_25 Belongs to the GMC oxidoreductase family K00108 - 1.1.99.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000603 573.0
BYD3_k127_8000246_26 Amidohydrolase K03392,K10220 - 4.1.1.45,4.2.1.83 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002545 516.0
BYD3_k127_8000246_27 - - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002997 488.0
BYD3_k127_8000246_28 Amidohydrolase K07045,K14333,K20941 - 4.1.1.103,4.1.1.46 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001284 451.0
BYD3_k127_8000246_29 Periplasmic binding protein domain K02529 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001323 449.0
BYD3_k127_8000246_3 Acetyl-coenzyme A synthetase N-terminus K01907 - 6.2.1.16 3.153e-290 925.0
BYD3_k127_8000246_30 Retinal pigment epithelial membrane protein K11159 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008615 449.0
BYD3_k127_8000246_31 PFAM pfkB family carbohydrate kinase K00856 - 2.7.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001021 424.0
BYD3_k127_8000246_32 Protein involved in receptor activity and transport K02014 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002238 450.0
BYD3_k127_8000246_33 Aldo/keto reductase family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007038 424.0
BYD3_k127_8000246_34 aldo keto reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003165 422.0
BYD3_k127_8000246_35 Carbon-nitrogen hydrolase K03820 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002942 381.0
BYD3_k127_8000246_36 Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate K01491 - 1.5.1.5,3.5.4.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004023 355.0
BYD3_k127_8000246_37 Fatty acid desaturase K10255 - 1.14.19.23,1.14.19.45 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004804 355.0
BYD3_k127_8000246_38 Transcriptional regulator - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003886 347.0
BYD3_k127_8000246_39 PFAM amidohydrolase 2 K07045 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001299 331.0
BYD3_k127_8000246_4 alpha-glucosidase K01187 - 3.2.1.20 6.495e-285 892.0
BYD3_k127_8000246_40 KR domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005143 334.0
BYD3_k127_8000246_41 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002001 335.0
BYD3_k127_8000246_42 Belongs to the GST superfamily K11209 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 312.0
BYD3_k127_8000246_43 Peptidase M56, BlaR1 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000006255 301.0
BYD3_k127_8000246_44 Involved in the tonB-independent uptake of proteins - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000002647 272.0
BYD3_k127_8000246_45 Methylenetetrahydrofolate reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000001426 274.0
BYD3_k127_8000246_46 Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH K02379 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001966 257.0
BYD3_k127_8000246_47 Major Facilitator Superfamily - - - 0.000000000000000000000000000000000000000000000000000000000000000000005164 252.0
BYD3_k127_8000246_48 Major Facilitator Superfamily - - - 0.00000000000000000000000000000000000000000000000000000000000000001236 254.0
BYD3_k127_8000246_49 FCD K11475 - - 0.000000000000000000000000000000000000000000000000000000000000000267 228.0
BYD3_k127_8000246_5 PQQ-like domain - - - 8.744e-264 831.0
BYD3_k127_8000246_50 MerR family regulatory protein - - - 0.0000000000000000000000000000000000000000000000000000000000000003773 239.0
BYD3_k127_8000246_51 Bacterial regulatory helix-turn-helix protein, lysR family - - - 0.0000000000000000000000000000000000000000000000000000000000002125 222.0
BYD3_k127_8000246_52 Glutathione S-transferase - - - 0.00000000000000000000000000000000000000000000000000000004873 204.0
BYD3_k127_8000246_53 Protein of unknown function (DUF3237) - - - 0.00000000000000000000000000000000000000000000000000000766 209.0
BYD3_k127_8000246_54 PFAM helix-turn-helix- domain containing protein AraC type - - - 0.00000000000000000000000000000000000000000000000000006965 198.0
BYD3_k127_8000246_55 Thioredoxin-like [2Fe-2S] ferredoxin - - - 0.000000000000000000000000000000000000000000000000000382 188.0
BYD3_k127_8000246_56 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.00000000000000000000000000000000000000000000000000994 196.0
BYD3_k127_8000246_57 Protein of unknown function (DUF3237) - - - 0.0000000000000000000000000000000000000000000004882 186.0
BYD3_k127_8000246_58 - - - - 0.00000000000000000000000000000000000000000003183 171.0
BYD3_k127_8000246_59 negative regulation of transcription, DNA-templated - - - 0.000000000000000000000000000000000000000005605 157.0
BYD3_k127_8000246_6 Dehydrogenase K17760 - 1.1.9.1 4.027e-262 826.0
BYD3_k127_8000246_60 Trypsin-like serine protease - - - 0.00000000000000000000000000000000000000003458 165.0
BYD3_k127_8000246_61 membrane - - - 0.0000000000000000000000000000001879 126.0
BYD3_k127_8000246_62 nuclease K01174 GO:0003674,GO:0003824,GO:0004518,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0019439,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:1901360,GO:1901361,GO:1901575 3.1.31.1 0.0000000000000000000000001795 113.0
BYD3_k127_8000246_63 Transcriptional regulator, MarR family protein - - - 0.000000000000000000000002261 108.0
BYD3_k127_8000246_64 auxin-activated signaling pathway K07088 - - 0.0000000000000000000004559 107.0
BYD3_k127_8000246_65 TRANSCRIPTIONal - - - 0.000000000000000000002934 98.0
BYD3_k127_8000246_66 EthD domain - - - 0.0000000000000000005062 92.0
BYD3_k127_8000246_67 Tetratricopeptide repeat - - - 0.00000000000004552 86.0
BYD3_k127_8000246_68 NADH-dependant formate dehydrogenase delta subunit FdsD K00126 - 1.17.1.9 0.0000000000009902 70.0
BYD3_k127_8000246_69 - - - - 0.0000000001692 66.0
BYD3_k127_8000246_7 May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine K01251 - 3.3.1.1 5.4e-259 805.0
BYD3_k127_8000246_70 OmpA-like transmembrane domain K03286 - - 0.000002847 57.0
BYD3_k127_8000246_8 TonB dependent receptor K02014 - - 3.411e-254 816.0
BYD3_k127_8000246_9 alpha-glucosidase K01187 - 3.2.1.20 8.848e-252 793.0
BYD3_k127_8154423_0 Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00163 - 1.2.4.1 0.0 1301.0
BYD3_k127_8154423_1 Glycosyl hydrolase, family 20, catalytic domain - - - 2.145e-318 995.0
BYD3_k127_8154423_10 Beta-xylanase K01181 - 3.2.1.8 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001872 381.0
BYD3_k127_8154423_11 ABC-type multidrug transport system, ATPase component K01990 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001546 351.0
BYD3_k127_8154423_12 PFAM ABC transporter K01990 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003778 351.0
BYD3_k127_8154423_13 quinolinate catabolic process K00767 - 2.4.2.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007052 346.0
BYD3_k127_8154423_14 Phosphoenolpyruvate phosphomutase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008555 332.0
BYD3_k127_8154423_15 InterPro IPR010496 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 338.0
BYD3_k127_8154423_16 DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate K10773 - 4.2.99.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002331 310.0
BYD3_k127_8154423_17 COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K07693 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002268 309.0
BYD3_k127_8154423_18 - - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004698 304.0
BYD3_k127_8154423_19 Di-haem oxidoreductase, putative peroxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000004989 302.0
BYD3_k127_8154423_2 GMC oxidoreductase - - - 2.983e-257 803.0
BYD3_k127_8154423_20 Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis K03683 GO:0000287,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004540,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008408,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0031123,GO:0034470,GO:0034641,GO:0034660,GO:0042780,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0043628,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0140098,GO:1901360 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000621 291.0
BYD3_k127_8154423_21 dienelactone hydrolase K01061 - 3.1.1.45 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001051 293.0
BYD3_k127_8154423_22 Enoyl-(Acyl carrier protein) reductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000002612 254.0
BYD3_k127_8154423_23 Histidine kinase K07778 - 2.7.13.3 0.00000000000000000000000000000000000000000000000000000000000000000000186 249.0
BYD3_k127_8154423_24 phosphinothricin N-acetyltransferase activity K03823 - 2.3.1.183 0.000000000000000000000000000000000000000000000000000000000000000000003034 242.0
BYD3_k127_8154423_25 Urate oxidase N-terminal - - - 0.000000000000000000000000000000000000000000000000000000000000003301 223.0
BYD3_k127_8154423_26 ABC-type multidrug transport system, permease component K01992 - - 0.0000000000000000000000000000000000000000000000000000000000001785 236.0
BYD3_k127_8154423_27 secretion protein K01993 - - 0.00000000000000000000000000000000000000000000000000000004825 217.0
BYD3_k127_8154423_28 Protein of unknown function (DUF1761) - - - 0.0000000000000000000000000000000000000000000000000002506 190.0
BYD3_k127_8154423_29 Part of a membrane complex involved in electron transport K03616 - - 0.0000000000000000000000000000000000000000000000000006174 202.0
BYD3_k127_8154423_3 PFAM biotin lipoyl attachment domain-containing protein K00382 - 1.8.1.4 4.779e-223 717.0
BYD3_k127_8154423_30 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000000000000000000000000000000000000002013 174.0
BYD3_k127_8154423_31 Protein of unknown function (DUF3574) - - - 0.00000000000000000000000000000000000000009147 161.0
BYD3_k127_8154423_32 Domain of unknown function (DUF1841) - - - 0.00000000000000000000000000000000000000239 153.0
BYD3_k127_8154423_33 Belongs to the glutaredoxin family. Monothiol subfamily K07390 - - 0.000000000000000000000000000000000000002928 151.0
BYD3_k127_8154423_34 Tetratricopeptide repeat - - - 0.000000000000000000000000000000000003074 146.0
BYD3_k127_8154423_35 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000001618 149.0
BYD3_k127_8154423_36 Gluconate 2-dehydrogenase subunit 3 - - - 0.00000000000000000000000000000002564 138.0
BYD3_k127_8154423_37 Amidohydrolase family - - - 0.0000000000000000000000000000008916 140.0
BYD3_k127_8154423_38 helix_turn_helix, arabinose operon control protein K07506 - - 0.00000000000000000000000000000142 132.0
BYD3_k127_8154423_39 Carbohydrate binding domain - - - 0.00000000000000000003638 97.0
BYD3_k127_8154423_4 Belongs to the glycosyl hydrolase 43 family K01198,K01209 - 3.2.1.37,3.2.1.55 3.029e-220 695.0
BYD3_k127_8154423_40 YjbR - - - 0.00000000000000003107 93.0
BYD3_k127_8154423_41 Psort location Cytoplasmic, score - - - 0.000000000189 70.0
BYD3_k127_8154423_42 YjbR - - - 0.000000002566 68.0
BYD3_k127_8154423_43 competence protein - - - 0.00007873 55.0
BYD3_k127_8154423_5 The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) K00382,K00627 - 1.8.1.4,2.3.1.12 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001899 505.0
BYD3_k127_8154423_6 Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate K01465 - 3.5.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001122 466.0
BYD3_k127_8154423_7 enterobactin catabolic process K07214,K09689 - 3.6.3.38 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001565 451.0
BYD3_k127_8154423_8 Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation K01874 - 6.1.1.10 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 426.0
BYD3_k127_8154423_9 Transport permease protein K01992 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001669 387.0
BYD3_k127_8170638_0 Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA K01895 - 6.2.1.1 3.544e-287 891.0
BYD3_k127_8170638_1 Exodeoxyribonuclease IX - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000002584 294.0
BYD3_k127_8170638_2 Soluble NSF attachment protein, SNAP - - - 0.0000000000000000000000000000000000000000000000000000000005115 231.0
BYD3_k127_8170638_3 Soluble NSF attachment protein, SNAP - - - 0.0000000000000000000000000000000000000000000000000002035 213.0
BYD3_k127_8170638_4 RNA polymerase sigma factor, sigma-70 family K03088 - - 0.00000000000000000001174 100.0
BYD3_k127_8170638_5 Belongs to the peptidase S8 family K13275,K13277 - - 0.00000000000000001343 96.0
BYD3_k127_8170638_6 Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway - - - 0.000000000004437 76.0
BYD3_k127_8186778_0 His Kinase A (phosphoacceptor) domain - - - 3.579e-225 727.0
BYD3_k127_8186778_1 Bacterial regulatory helix-turn-helix protein, lysR family K04761 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002581 372.0
BYD3_k127_8186778_2 alkaline phosphatase K01113 - 3.1.3.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003291 338.0
BYD3_k127_8186778_3 Histidine kinase - - - 0.0000000000000000000000000000000000005813 162.0
BYD3_k127_8186778_4 Tryptophan halogenase K14266 - 1.14.19.9 0.000000000001875 70.0
BYD3_k127_8219986_0 ATPase FliI YscN family K02412 - 3.6.3.14 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003311 567.0
BYD3_k127_8219986_1 FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation K02410 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003021 412.0
BYD3_k127_8219986_2 The M ring may be actively involved in energy transduction K02409 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009225 412.0
BYD3_k127_8219986_3 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains K10943 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008529 365.0
BYD3_k127_8219986_4 PFAM Flagellar assembly protein FliH K02411 - - 0.00000000000000000000000000000000006051 145.0
BYD3_k127_8219986_5 Flagellar hook-basal body complex protein FliE K02408 - - 0.0000000000000000000002672 100.0
BYD3_k127_8219986_6 Flagellar FliJ protein K02413 - - 0.0000000001054 74.0
BYD3_k127_8243593_0 Histidine kinase-, DNA gyrase B-, and HSP90-like - - - 0.000000000000000000000000000000000000000000000000000000000000003069 236.0
BYD3_k127_8243593_1 L,D-transpeptidase catalytic domain - - - 0.000000000000000000000000000000000000000000000000000003922 200.0
BYD3_k127_8243593_2 Dodecin K09165 - - 0.0000000000000000000000000003569 115.0
BYD3_k127_8243593_3 Adenylate cyclase - - - 0.0001251 51.0
BYD3_k127_8292726_0 COG1629 Outer membrane receptor proteins, mostly Fe transport - - - 1.607e-298 945.0
BYD3_k127_8292726_1 probably responsible for the translocation of the substrate across the membrane K02037 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004234 583.0
BYD3_k127_8292726_10 Belongs to the transferase hexapeptide repeat family K00674 - 2.3.1.117 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000403 405.0
BYD3_k127_8292726_11 Belongs to the GST superfamily K11209 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006629 393.0
BYD3_k127_8292726_12 Histidine kinase K07636 - 2.7.13.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001106 370.0
BYD3_k127_8292726_13 amidohydrolase K07045 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003343 320.0
BYD3_k127_8292726_14 phosphate regulon transcriptional regulatory protein PhoB K07657 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001686 312.0
BYD3_k127_8292726_15 Plays a role in the regulation of phosphate uptake K02039 GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0008150,GO:0009892,GO:0010563,GO:0010966,GO:0019220,GO:0019222,GO:0031323,GO:0031324,GO:0032879,GO:0034762,GO:0034763,GO:0034765,GO:0034766,GO:0042802,GO:0042803,GO:0043269,GO:0043271,GO:0044070,GO:0044424,GO:0044464,GO:0045936,GO:0046983,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051049,GO:0051051,GO:0051174,GO:0065007,GO:1903792,GO:1903795,GO:1903796,GO:1903959,GO:1903960,GO:2000185,GO:2000186 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000447 300.0
BYD3_k127_8292726_16 Helicase K03722 - 3.6.4.12 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000001921 296.0
BYD3_k127_8292726_17 Winged helix DNA-binding domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000001229 286.0
BYD3_k127_8292726_18 Protein of unknown function DUF47 K07220 - - 0.000000000000000000000000000000000000000000000000000000000000000000004155 241.0
BYD3_k127_8292726_19 Putative porin - GO:0005575,GO:0005623,GO:0009279,GO:0016020,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0044462,GO:0044464,GO:0071944 - 0.000000000000000000000000000000000000000000000000000005053 207.0
BYD3_k127_8292726_2 Extracellular solute-binding protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003162 576.0
BYD3_k127_8292726_20 PFAM Peptidase M22, glycoprotease K14742 - - 0.000000000000000000000000000000000000000000000006232 179.0
BYD3_k127_8292726_21 Plays a role in the regulation of phosphate uptake K02039 - - 0.00000000000000000000000000000000000000002216 162.0
BYD3_k127_8292726_22 Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein K03611 - - 0.000000000000000000000000000000000001044 154.0
BYD3_k127_8292726_23 Reprolysin (M12B) family zinc metalloprotease - - - 0.0000000000000000000000001619 122.0
BYD3_k127_8292726_3 Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen K00990 - 2.7.7.59 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005683 575.0
BYD3_k127_8292726_4 Domain of unknown function (DUF3333) K02038 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005677 558.0
BYD3_k127_8292726_5 Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls K01439 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0008652,GO:0009014,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0032153,GO:0042802,GO:0043167,GO:0043169,GO:0043436,GO:0043648,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0046872,GO:0046914,GO:0050897,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005984 497.0
BYD3_k127_8292726_6 COG0436 Aspartate tyrosine aromatic aminotransferase K14261,K14267 - 2.6.1.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001143 498.0
BYD3_k127_8292726_7 Phosphate transporter family K03306 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001302 484.0
BYD3_k127_8292726_8 PBP superfamily domain K02040 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001236 445.0
BYD3_k127_8292726_9 Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system K02036 - 3.6.3.27 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008253 437.0
BYD3_k127_8454150_0 DEAD DEAH box helicase K03724 - - 0.0 1741.0
BYD3_k127_8454150_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K15726 - - 0.0 1487.0
BYD3_k127_8454150_10 Aldehyde dehydrogenase family K00130,K00137 - 1.2.1.19,1.2.1.8 4.051e-234 732.0
BYD3_k127_8454150_100 NACHT domain - - - 0.00000000000000000000000000000000000000000000000000000005101 224.0
BYD3_k127_8454150_101 Sigma-70 region 2 K03088 - - 0.0000000000000000000000000000000000000000000000000000001448 201.0
BYD3_k127_8454150_102 PAS domain containing protein K13924 - 2.1.1.80,3.1.1.61 0.0000000000000000000000000000000000000000000000000000006546 212.0
BYD3_k127_8454150_103 Ferritin-like domain K03594 - 1.16.3.1 0.000000000000000000000000000000000000000000000000000007272 193.0
BYD3_k127_8454150_104 Protein of unknown function (DUF3592) - - - 0.000000000000000000000000000000000000000000000000001652 190.0
BYD3_k127_8454150_105 Methyltransferase domain - - - 0.00000000000000000000000000000000000000000000000000619 190.0
BYD3_k127_8454150_106 Predicted membrane protein (DUF2231) - - - 0.00000000000000000000000000000000000000000000000004915 184.0
BYD3_k127_8454150_107 GDSL-like Lipase/Acylhydrolase family - - - 0.0000000000000000000000000000000000000000000000001165 190.0
BYD3_k127_8454150_108 Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps K01749 - 2.5.1.61 0.0000000000000000000000000000000000000000000000003736 194.0
BYD3_k127_8454150_109 conserved protein UCP033924 - - - 0.000000000000000000000000000000000000000000000002533 176.0
BYD3_k127_8454150_11 CBD_II K01179 - 3.2.1.4 4.344e-224 726.0
BYD3_k127_8454150_110 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K07657 - - 0.00000000000000000000000000000000000000000000001791 179.0
BYD3_k127_8454150_111 Acetyltransferase (GNAT) domain - - - 0.00000000000000000000000000000000000000000000004026 174.0
BYD3_k127_8454150_112 Cro/C1-type HTH DNA-binding domain - - - 0.00000000000000000000000000000000000000000000006051 178.0
BYD3_k127_8454150_113 Cupin 2, conserved barrel domain protein - - - 0.000000000000000000000000000000000000000000001958 181.0
BYD3_k127_8454150_114 ECF sigma factor - - - 0.000000000000000000000000000000000000000000002265 173.0
BYD3_k127_8454150_115 Pirin C-terminal cupin domain K06911 - - 0.000000000000000000000000000000000000000004352 166.0
BYD3_k127_8454150_116 PFAM conserved K08973 - - 0.00000000000000000000000000000000000000001281 164.0
BYD3_k127_8454150_117 PFAM GCN5-related N-acetyltransferase - - - 0.0000000000000000000000000000000000000002733 157.0
BYD3_k127_8454150_118 endonuclease activity - - - 0.00000000000000000000000000000000000005192 157.0
BYD3_k127_8454150_119 META domain K03929 - - 0.00000000000000000000000000000000000006952 153.0
BYD3_k127_8454150_12 Histidine ammonia-lyase K01745 - 4.3.1.3 1.715e-223 702.0
BYD3_k127_8454150_120 Peptidase M14, carboxypeptidase A K05996 - 3.4.17.18 0.00000000000000000000000000000000000007669 164.0
BYD3_k127_8454150_121 Glycosyl hydrolase family 12 K01179,K01183,K20276,K20628,K20844 - 3.2.1.14,3.2.1.4,3.2.1.55 0.0000000000000000000000000000000000003923 162.0
BYD3_k127_8454150_122 HxlR-like helix-turn-helix - - - 0.00000000000000000000000000000000003786 138.0
BYD3_k127_8454150_123 - - - - 0.0000000000000000000000000000000819 133.0
BYD3_k127_8454150_124 PFAM RNP-1 like RNA-binding protein - - - 0.0000000000000000000000000005489 126.0
BYD3_k127_8454150_125 Universal stress protein family K14055 GO:0000302,GO:0001539,GO:0006928,GO:0006950,GO:0006979,GO:0008150,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009636,GO:0009987,GO:0010035,GO:0033554,GO:0034599,GO:0034614,GO:0034644,GO:0035690,GO:0040011,GO:0042221,GO:0042493,GO:0042542,GO:0042710,GO:0044010,GO:0044764,GO:0046677,GO:0048870,GO:0050896,GO:0051179,GO:0051674,GO:0051704,GO:0051716,GO:0070301,GO:0070887,GO:0071214,GO:0071236,GO:0071478,GO:0071482,GO:0071973,GO:0097237,GO:0097588,GO:0104004,GO:1901700,GO:1901701 - 0.0000000000000000000000000006146 126.0
BYD3_k127_8454150_126 transcriptional regulator - - - 0.000000000000000000000000667 112.0
BYD3_k127_8454150_127 Histidine kinase - - - 0.0000000000000000000003703 108.0
BYD3_k127_8454150_128 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.000000000000000000004756 107.0
BYD3_k127_8454150_129 Histidine kinase - - - 0.000000000000000000004958 109.0
BYD3_k127_8454150_13 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K15576,K22067 - - 2.427e-210 664.0
BYD3_k127_8454150_130 CBD_II - - - 0.000000000000000001353 102.0
BYD3_k127_8454150_131 PFAM Rhomboid family - - - 0.0000000000000001062 89.0
BYD3_k127_8454150_132 - - - - 0.000000000000001207 89.0
BYD3_k127_8454150_133 Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - 0.000000000000009792 82.0
BYD3_k127_8454150_134 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily - - - 0.00000000000001764 78.0
BYD3_k127_8454150_135 pyridoxamine 5-phosphate - - - 0.0000000000002273 76.0
BYD3_k127_8454150_136 Protein of unknown function (DUF3313) - - - 0.000000000001371 76.0
BYD3_k127_8454150_137 Protein of unknown function (DUF2934) - - - 0.000000004841 61.0
BYD3_k127_8454150_138 Protein of unknown function (DUF3187) - - - 0.00000003718 65.0
BYD3_k127_8454150_139 Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA) K02492 - 1.2.1.70 0.0000001125 63.0
BYD3_k127_8454150_14 - - - - 1.037e-205 661.0
BYD3_k127_8454150_141 Histidine kinase - - - 0.000007344 53.0
BYD3_k127_8454150_143 Tetratricopeptide repeat - - - 0.0001146 49.0
BYD3_k127_8454150_144 - - - - 0.0001894 49.0
BYD3_k127_8454150_145 - - - - 0.0003183 51.0
BYD3_k127_8454150_146 Hemin uptake protein - - - 0.0004845 45.0
BYD3_k127_8454150_147 cheY-homologous receiver domain - - - 0.0005682 49.0
BYD3_k127_8454150_148 Transcriptional regulatory protein, C terminal - - - 0.0007838 48.0
BYD3_k127_8454150_15 Cellulase (glycosyl hydrolase family 5) - - - 1.314e-199 631.0
BYD3_k127_8454150_16 isomerase K01820 - 5.3.1.14 1.847e-198 625.0
BYD3_k127_8454150_17 Pectic acid lyase - - - 4.283e-195 623.0
BYD3_k127_8454150_18 Glucose / Sorbosone dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006213 620.0
BYD3_k127_8454150_19 Domain of unknown function (DUF3520) K07114 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 613.0
BYD3_k127_8454150_2 pyrroloquinoline quinone binding - - - 0.0 1234.0
BYD3_k127_8454150_20 Bacterial protein of unknown function (DUF885) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003279 590.0
BYD3_k127_8454150_21 Spermidine putrescine ABC transporter substrate-binding protein K02055 GO:0005575,GO:0005623,GO:0006810,GO:0008150,GO:0008152,GO:0009058,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0042618,GO:0042619,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071704,GO:0071705,GO:0098657,GO:1901440,GO:1901441,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001093 568.0
BYD3_k127_8454150_22 DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair K10747 - 6.5.1.1,6.5.1.6,6.5.1.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009619 545.0
BYD3_k127_8454150_23 Ferritin-like K20087 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001146 551.0
BYD3_k127_8454150_24 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003732 537.0
BYD3_k127_8454150_25 Pyridoxal phosphate biosynthetic protein PdxA K00097,K22024 - 1.1.1.262,1.1.1.408,1.1.1.409 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009513 520.0
BYD3_k127_8454150_26 The 2-keto-3-deoxygluconate permease transports the degraded pectin products into the bacterial cell, where they serve as carbon and energy sources. This is a hydrogen coupled transport system K02526 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001216 511.0
BYD3_k127_8454150_27 FMN-dependent alpha-hydroxy acid dehydrogenase K00101 - 1.1.2.3 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005229 492.0
BYD3_k127_8454150_28 Peptidase family M28 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002488 496.0
BYD3_k127_8454150_29 Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system K10562 - 3.6.3.17 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001716 481.0
BYD3_k127_8454150_3 TonB-dependent Receptor Plug Domain - - - 0.0 1199.0
BYD3_k127_8454150_30 Regulatory protein GntR HTH - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005383 462.0
BYD3_k127_8454150_31 FAD binding domain K09828 - 1.3.1.72 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001183 474.0
BYD3_k127_8454150_32 Pfam:Pyridox_oxidase K01768 - 4.6.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002623 462.0
BYD3_k127_8454150_33 Glycerophosphoryl diester phosphodiesterase family K01126 - 3.1.4.46 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001222 441.0
BYD3_k127_8454150_34 Nacht domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001578 455.0
BYD3_k127_8454150_35 Alcohol dehydrogenase GroES-like domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000198 425.0
BYD3_k127_8454150_36 PFAM monooxygenase FAD-binding - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000173 419.0
BYD3_k127_8454150_37 Male sterility protein K01784 - 5.1.3.2 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003384 416.0
BYD3_k127_8454150_38 TIGRFAM nitrate ABC transporter, ATPase subunits C and D K02049,K15578 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004469 413.0
BYD3_k127_8454150_39 Nitrate ABC transporter inner membrane subunit K15577 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000126 415.0
BYD3_k127_8454150_4 TonB-dependent receptor - - - 0.0 1139.0
BYD3_k127_8454150_40 Oxidoreductase family, C-terminal alpha/beta domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004767 408.0
BYD3_k127_8454150_41 lacI family K02529 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009135 407.0
BYD3_k127_8454150_42 topoisomerase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006194 400.0
BYD3_k127_8454150_43 Membrane-bound lytic murein transglycosylase K08304 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001532 404.0
BYD3_k127_8454150_44 Aminotransferase class I and II - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002865 394.0
BYD3_k127_8454150_45 ABC-type spermidine putrescine transport system, permease component I K02054 GO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001543 390.0
BYD3_k127_8454150_46 PFAM Aminotransferase class-III K01845 - 5.4.3.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001008 394.0
BYD3_k127_8454150_47 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000023 382.0
BYD3_k127_8454150_48 Carbohydrate kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000627 399.0
BYD3_k127_8454150_49 beta' subunit K01754 - 4.3.1.19 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002128 377.0
BYD3_k127_8454150_5 Class II Aldolase and Adducin N-terminal domain - - - 7.472e-320 993.0
BYD3_k127_8454150_50 aldo keto reductase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 370.0
BYD3_k127_8454150_51 Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system K02052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001712 381.0
BYD3_k127_8454150_52 Belongs to the binding-protein-dependent transport system permease family K10561 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001566 367.0
BYD3_k127_8454150_53 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) K00065 - 1.1.1.127 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003815 356.0
BYD3_k127_8454150_54 thiolester hydrolase activity - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000108 361.0
BYD3_k127_8454150_55 serine threonine protein kinase K08884,K12132 - 2.7.11.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001514 384.0
BYD3_k127_8454150_56 pyrroloquinoline quinone binding - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001522 366.0
BYD3_k127_8454150_57 Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX K00228 GO:0003674,GO:0003824,GO:0004109,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016491,GO:0016627,GO:0016634,GO:0018130,GO:0019438,GO:0030145,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044424,GO:0044464,GO:0046148,GO:0046483,GO:0046872,GO:0046906,GO:0046914,GO:0046983,GO:0051186,GO:0051188,GO:0055114,GO:0071704,GO:0097159,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576 1.3.3.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001823 355.0
BYD3_k127_8454150_58 KR domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004886 349.0
BYD3_k127_8454150_59 NmrA-like family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001245 350.0
BYD3_k127_8454150_6 Belongs to the glycosyl hydrolase 3 family K05349 - 3.2.1.21 2.1e-285 894.0
BYD3_k127_8454150_60 Belongs to the binding-protein-dependent transport system permease family K10556,K10560 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003974 347.0
BYD3_k127_8454150_61 ABC transporter (permease) K02053 GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008150,GO:0009290,GO:0009292,GO:0009294,GO:0009987,GO:0015931,GO:0016020,GO:0044464,GO:0044764,GO:0050657,GO:0051027,GO:0051179,GO:0051234,GO:0051704,GO:0071702,GO:0071705,GO:0071944,GO:0098657 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008916 341.0
BYD3_k127_8454150_62 DeoR C terminal sensor domain - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003055 334.0
BYD3_k127_8454150_63 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family K15727 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004322 347.0
BYD3_k127_8454150_64 Catalyzes the ferrous insertion into protoporphyrin IX K01772 GO:0003674,GO:0003824,GO:0004325,GO:0006725,GO:0006778,GO:0006779,GO:0006783,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009987,GO:0016829,GO:0018130,GO:0019438,GO:0033013,GO:0033014,GO:0034641,GO:0042168,GO:0042440,GO:0044237,GO:0044249,GO:0044271,GO:0046148,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.99.1.1,4.99.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001408 347.0
BYD3_k127_8454150_65 Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate K01815 - 5.3.1.17 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005891 327.0
BYD3_k127_8454150_66 Outer membrane efflux protein K15725 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000789 334.0
BYD3_k127_8454150_67 infection protein K07052 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002787 328.0
BYD3_k127_8454150_68 Patatin-like phospholipase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003757 344.0
BYD3_k127_8454150_69 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007609 335.0
BYD3_k127_8454150_7 peptidase K01354 - 3.4.21.83 8.358e-280 878.0
BYD3_k127_8454150_70 PFAM pyridoxamine 5-phosphate K07006 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007656 326.0
BYD3_k127_8454150_71 Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth K03086 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008637 306.0
BYD3_k127_8454150_72 ABC transporter K10559 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001224 326.0
BYD3_k127_8454150_73 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002317 310.0
BYD3_k127_8454150_74 PFAM NAD binding domain of 6-phosphogluconate dehydrogenase K00020,K00042 - 1.1.1.31,1.1.1.60 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000004089 302.0
BYD3_k127_8454150_75 Putative nucleotide-binding of sugar-metabolising enzyme K22129 - 2.7.1.219,2.7.1.220 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000009328 317.0
BYD3_k127_8454150_76 Protein of unknown function DUF72 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000003429 299.0
BYD3_k127_8454150_77 Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III K01599 - 4.1.1.37 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000004724 293.0
BYD3_k127_8454150_78 TonB dependent receptor K02014 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001189 306.0
BYD3_k127_8454150_79 His Kinase A (phosphoacceptor) domain - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000009584 297.0
BYD3_k127_8454150_8 Na( ) H( ) antiporter that extrudes sodium in exchange for external protons K03313 - - 3.41e-265 828.0
BYD3_k127_8454150_80 Peptidase family M48 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004052 284.0
BYD3_k127_8454150_81 Phospholipase, patatin family K07001 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000004335 295.0
BYD3_k127_8454150_82 MgtC family K07507 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000004063 289.0
BYD3_k127_8454150_83 FR47-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000007342 276.0
BYD3_k127_8454150_84 ubiE/COQ5 methyltransferase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000008699 284.0
BYD3_k127_8454150_85 abc transporter, permease - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000009834 279.0
BYD3_k127_8454150_86 Pectate lyase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000007819 283.0
BYD3_k127_8454150_87 Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein K03734 - 2.7.1.180 0.0000000000000000000000000000000000000000000000000000000000000000000000000000176 272.0
BYD3_k127_8454150_88 Glutathione S-transferase, C-terminal domain K00799 GO:0000302,GO:0003674,GO:0003824,GO:0004364,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006950,GO:0006979,GO:0008150,GO:0009636,GO:0010035,GO:0016740,GO:0016765,GO:0042221,GO:0042493,GO:0042542,GO:0044424,GO:0044464,GO:0046677,GO:0050896,GO:1901700 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000000000003345 261.0
BYD3_k127_8454150_89 2-keto-4-pentenoate hydratase K02554 - 4.2.1.80 0.0000000000000000000000000000000000000000000000000000000000000000000000008046 256.0
BYD3_k127_8454150_9 Adenylate cyclase - - - 1.138e-263 827.0
BYD3_k127_8454150_90 ATP-binding region ATPase domain protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000001097 263.0
BYD3_k127_8454150_91 helix_turn_helix, Lux Regulon - - - 0.000000000000000000000000000000000000000000000000000000000000000003037 239.0
BYD3_k127_8454150_92 Putative PepSY_TM-like K09939 - - 0.000000000000000000000000000000000000000000000000000000000000003082 223.0
BYD3_k127_8454150_93 Predicted periplasmic protein (DUF2271) - - - 0.00000000000000000000000000000000000000000000000000000000000002038 218.0
BYD3_k127_8454150_94 Glutathione-dependent formaldehyde-activating enzyme - - - 0.00000000000000000000000000000000000000000000000000000000000006472 215.0
BYD3_k127_8454150_95 TK COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain K02479 - - 0.00000000000000000000000000000000000000000000000000000000000864 214.0
BYD3_k127_8454150_96 Xylose isomerase-like TIM barrel - - - 0.00000000000000000000000000000000000000000000000000000000001184 222.0
BYD3_k127_8454150_97 ribonuclease BN K07058 - - 0.00000000000000000000000000000000000000000000000000000000002006 218.0
BYD3_k127_8454150_98 Cytochrome c - - - 0.00000000000000000000000000000000000000000000000000000000002172 227.0
BYD3_k127_8454150_99 glyoxalase bleomycin resistance protein dioxygenase - - - 0.0000000000000000000000000000000000000000000000000000000002809 207.0
BYD3_k127_8520385_0 Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly K11942 - 5.4.99.13 0.0 1442.0
BYD3_k127_8520385_1 glutamate dehydrogenase K15371 - 1.4.1.2 0.0 1402.0
BYD3_k127_8520385_10 Phosphoglycerate mutase family K01834 - 5.4.2.11 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004068 359.0
BYD3_k127_8520385_11 Acyl CoA acetate 3-ketoacid CoA transferase, beta subunit K01029 - 2.8.3.5 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001743 354.0
BYD3_k127_8520385_12 Protein of unknown function (DUF418) K07148 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005541 331.0
BYD3_k127_8520385_13 Reduces the stability of FtsZ polymers in the presence of ATP K06916 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001971 342.0
BYD3_k127_8520385_14 Belongs to the short-chain dehydrogenases reductases (SDR) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000003922 297.0
BYD3_k127_8520385_15 maleylacetoacetate isomerase - - - 0.00000000000000000000000000000000000000000000000000000000000000005537 229.0
BYD3_k127_8520385_16 Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process K03981 - 5.3.4.1 0.000000000000000000000000000000000000000000000000000000009924 208.0
BYD3_k127_8520385_17 glycosyl transferase family 2 - - - 0.00000000000000000000000000000000000000000000000000000002565 214.0
BYD3_k127_8520385_18 Nudix N-terminal - - - 0.00000000000000000000000000000000000000000000000000000003233 201.0
BYD3_k127_8520385_19 PFAM regulatory protein TetR K09017 - - 0.0000000000000000000000000000000000000000000000000002409 192.0
BYD3_k127_8520385_2 Electron transfer flavoprotein-ubiquinone oxidoreductase K00311 - 1.5.5.1 1.358e-233 733.0
BYD3_k127_8520385_20 Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions K05524 - - 0.00000000000000000000000000000000000000000000000000364 187.0
BYD3_k127_8520385_21 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.00000000000000000000000000000000000000000000002199 179.0
BYD3_k127_8520385_22 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II - - - 0.00000000000000000000000000000000000000000000006439 179.0
BYD3_k127_8520385_23 Transcriptional regulator - - - 0.0000000000000000000000000000000000006182 144.0
BYD3_k127_8520385_24 Belongs to the sigma-70 factor family. ECF subfamily K03088 - - 0.0000000000000000000000000000001156 132.0
BYD3_k127_8520385_25 transcriptional regulator - - - 0.00000000000000000000000000001068 128.0
BYD3_k127_8520385_26 - - - - 0.0000000000002228 70.0
BYD3_k127_8520385_27 Trypsin - - - 0.00000009441 61.0
BYD3_k127_8520385_3 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal K00457 - 1.13.11.27 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007542 524.0
BYD3_k127_8520385_4 Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation K00626 - 2.3.1.9 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 485.0
BYD3_k127_8520385_5 TIGRFAM Tyrosine recombinase XerD K04763 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005823 389.0
BYD3_k127_8520385_6 Alpha/beta hydrolase family - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004846 385.0
BYD3_k127_8520385_7 Coenzyme A transferase K01028,K01034 - 2.8.3.5,2.8.3.8,2.8.3.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002893 364.0
BYD3_k127_8520385_8 helix_turn_helix, arabinose operon control protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000494 383.0
BYD3_k127_8520385_9 Nitronate monooxygenase K00459 - 1.13.12.16 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001457 363.0
BYD3_k127_8572073_0 Putative amidoligase enzyme (DUF2126) - - - 0.0 1697.0
BYD3_k127_8572073_1 TonB dependent receptor K02014 - - 0.0 1044.0
BYD3_k127_8572073_10 Domain of unknown function (DUF4394) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001101 451.0
BYD3_k127_8572073_11 PFAM Molybdopterin dehydrogenase, FAD-binding K11178 - 1.17.1.4 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008293 407.0
BYD3_k127_8572073_12 H( )-stimulated, divalent metal cation uptake system - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001108 385.0
BYD3_k127_8572073_13 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003042 311.0
BYD3_k127_8572073_14 Transglutaminase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000779 297.0
BYD3_k127_8572073_15 ParB-like nuclease domain K03497 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000003555 276.0
BYD3_k127_8572073_16 - - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000002753 267.0
BYD3_k127_8572073_17 Histidine kinase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000001365 271.0
BYD3_k127_8572073_18 cytochrome c peroxidase K00428 - 1.11.1.5 0.000000000000000000000000000000000000000000000000000000000000000000000004594 259.0
BYD3_k127_8572073_19 Glutathione S-transferase, C-terminal domain K00799 - 2.5.1.18 0.00000000000000000000000000000000000000000000000000000000000000000001087 242.0
BYD3_k127_8572073_2 Catalyzes the reversible hydration of fumarate to (S)- malate K01676 - 4.2.1.2 3.144e-273 846.0
BYD3_k127_8572073_20 2Fe-2S -binding - - - 0.0000000000000000000000000000000000000000000000000000000000000004603 226.0
BYD3_k127_8572073_21 O-methyltransferase - - - 0.000000000000000000000000000000000000000000000000000001759 197.0
BYD3_k127_8572073_22 LysR family - - - 0.000000000000000000000000000000000000000000000000002205 193.0
BYD3_k127_8572073_23 Methyl-transferase - - - 0.000000000000000000000000000000000000000000000005047 182.0
BYD3_k127_8572073_24 Histidine kinase - - - 0.0000000000000000000000000000000000000000000001458 191.0
BYD3_k127_8572073_25 formate dehydrogenase - - - 0.00000000000000000000000000000000000000002059 162.0
BYD3_k127_8572073_26 - - - - 0.000000000000000000000000000000001153 148.0
BYD3_k127_8572073_27 Putative diguanylate phosphodiesterase - - - 0.0000000000000000000000000004322 132.0
BYD3_k127_8572073_28 - - - - 0.00000000000000000008626 93.0
BYD3_k127_8572073_29 PFAM Cytochrome c, class I K00405 - - 0.000000000000001524 84.0
BYD3_k127_8572073_3 xanthine dehydrogenase a b hammerhead K11177 - 1.17.1.4 9.231e-218 701.0
BYD3_k127_8572073_30 - - - - 0.00000000000001455 82.0
BYD3_k127_8572073_31 A predicted alpha-helical domain with a conserved ER motif. - - - 0.00000001269 56.0
BYD3_k127_8572073_32 Tetratricopeptide repeat - - - 0.0000003962 61.0
BYD3_k127_8572073_33 EF-hand domain pair - - - 0.00003448 53.0
BYD3_k127_8572073_4 Circularly permuted ATP-grasp type 2 - - - 4.047e-213 686.0
BYD3_k127_8572073_5 Protein of unknown function (DUF1343) - - - 5.882e-206 646.0
BYD3_k127_8572073_6 A predicted alpha-helical domain with a conserved ER motif. - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000347 580.0
BYD3_k127_8572073_7 NADH dehydrogenase, FAD-containing subunit K03885 - 1.6.99.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003407 535.0
BYD3_k127_8572073_8 DEAD-box RNA helicase involved in ribosome assembly. Has RNA-dependent ATPase activity and unwinds double-stranded RNA K11927 GO:0003674,GO:0003724,GO:0003824,GO:0004004,GO:0004386,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0008026,GO:0008150,GO:0008152,GO:0008186,GO:0009266,GO:0009408,GO:0009628,GO:0009987,GO:0010501,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0042254,GO:0042255,GO:0042623,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0065003,GO:0070035,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0140098,GO:1901360 3.6.4.13 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006947 501.0
BYD3_k127_8572073_9 Glucose Sorbosone dehydrogenase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003072 473.0
BYD3_k127_8576419_0 Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005404 532.0
BYD3_k127_8576419_1 Lysin motif K08307 GO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0008150,GO:0008932,GO:0008933,GO:0009893,GO:0016020,GO:0016740,GO:0016757,GO:0019222,GO:0030288,GO:0030313,GO:0031975,GO:0042597,GO:0043085,GO:0044093,GO:0044464,GO:0048518,GO:0050789,GO:0050790,GO:0051341,GO:0051353,GO:0061783,GO:0065007,GO:0065009 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002401 453.0
BYD3_k127_8576419_2 Catalyzes a key regulatory step in fatty acid biosynthesis K00208 - 1.3.1.10,1.3.1.9 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001064 366.0
BYD3_k127_8576419_3 peptidylprolyl isomerase K03770 - 5.2.1.8 0.00000134 55.0
BYD3_k127_8758546_0 Glycosyl hydrolase 36 superfamily, catalytic domain K13688,K18786 GO:0003674,GO:0003824,GO:0016740,GO:0016757 2.4.1.321 0.0 3225.0
BYD3_k127_8758546_1 Methionine synthase K00548 - 2.1.1.13 0.0 1587.0
BYD3_k127_8758546_10 Transcriptional regulatory protein, C terminal - - - 4.751e-208 664.0
BYD3_k127_8758546_100 peptidase activity, acting on L-amino acid peptides K14647,K20276,K21449 - - 0.000000005066 70.0
BYD3_k127_8758546_101 COG4968 Tfp pilus assembly protein PilE K02655 - - 0.00000001689 62.0
BYD3_k127_8758546_102 Uncharacterised protein family (UPF0149) K07039 - - 0.00002252 55.0
BYD3_k127_8758546_103 6-phosphogluconolactonase activity - - - 0.0001346 56.0
BYD3_k127_8758546_104 - - - - 0.0001991 51.0
BYD3_k127_8758546_105 - - - - 0.0008996 43.0
BYD3_k127_8758546_11 Cytochrome c - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007745 586.0
BYD3_k127_8758546_12 Prolyl oligopeptidase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007568 595.0
BYD3_k127_8758546_13 Protein conserved in bacteria - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002394 589.0
BYD3_k127_8758546_14 Protein of unknown function (DUF1800) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005886 582.0
BYD3_k127_8758546_15 Respiratory-chain NADH dehydrogenase, 49 Kd subunit - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001623 567.0
BYD3_k127_8758546_16 Domain present in phytochromes and cGMP-specific phosphodiesterases. - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009033 545.0
BYD3_k127_8758546_17 tail sheath protein K06907 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000926 548.0
BYD3_k127_8758546_18 TIGRFAM chromate transporter, chromate ion transporter (CHR) family K07240 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001379 529.0
BYD3_k127_8758546_19 Sulfatase-modifying factor enzyme 1 - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002772 522.0
BYD3_k127_8758546_2 Allophanate hydrolase subunit 1 K01941 - 6.3.4.6 0.0 1395.0
BYD3_k127_8758546_20 PFAM AAA ATPase central domain protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001009 531.0
BYD3_k127_8758546_21 Involved in peptidoglycan biosynthesis. Transports lipid-linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane K03980 GO:0000270,GO:0003674,GO:0005215,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006022,GO:0006023,GO:0006024,GO:0006807,GO:0006810,GO:0006869,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009252,GO:0009273,GO:0009987,GO:0010876,GO:0015647,GO:0015648,GO:0015835,GO:0015836,GO:0016020,GO:0016021,GO:0016043,GO:0022857,GO:0022884,GO:0030203,GO:0031224,GO:0031226,GO:0033036,GO:0034203,GO:0034204,GO:0034645,GO:0042546,GO:0043170,GO:0044036,GO:0044038,GO:0044085,GO:0044237,GO:0044249,GO:0044260,GO:0044425,GO:0044459,GO:0044464,GO:0046836,GO:0051179,GO:0051234,GO:0055085,GO:0061024,GO:0065007,GO:0065008,GO:0070589,GO:0071554,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0097035,GO:1901135,GO:1901137,GO:1901264,GO:1901505,GO:1901564,GO:1901566,GO:1901576 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001326 504.0
BYD3_k127_8758546_22 Major Facilitator Superfamily - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000586 488.0
BYD3_k127_8758546_23 COG0318 Acyl-CoA synthetases (AMP-forming) AMP-acid ligases II K13614 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009662 473.0
BYD3_k127_8758546_24 6-phosphogluconate dehydrogenase K00033 - 1.1.1.343,1.1.1.44 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000272 462.0
BYD3_k127_8758546_25 COG0715 ABC-type nitrate sulfonate bicarbonate transport systems, periplasmic components K02051 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001017 458.0
BYD3_k127_8758546_26 Baseplate J-like protein - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003836 472.0
BYD3_k127_8758546_27 Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis K03527 - 1.17.7.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006846 453.0
BYD3_k127_8758546_28 Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway K00616 - 2.2.1.2 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002911 451.0
BYD3_k127_8758546_29 An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control K03979 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003133 440.0
BYD3_k127_8758546_3 amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) K01870 GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043169,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 0.0 1179.0
BYD3_k127_8758546_30 NADH dehydrogenase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001611 453.0
BYD3_k127_8758546_31 haloacid dehalogenase-like hydrolase - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004635 422.0
BYD3_k127_8758546_32 Belongs to the pirin family K06911 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001691 418.0
BYD3_k127_8758546_33 PFAM glycosyl hydrolase family 88 K15532 - 3.2.1.172 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009168 423.0
BYD3_k127_8758546_34 Protein of unknown function (DUF1800) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009853 413.0
BYD3_k127_8758546_35 Glycosyl hydrolases family 11 - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003552 401.0
BYD3_k127_8758546_36 COG1228 Imidazolonepropionase and related amidohydrolases - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001529 409.0
BYD3_k127_8758546_37 Methylenetetrahydrofolate reductase K00297 - 1.5.1.20 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005051 394.0
BYD3_k127_8758546_38 Baseplate J-like protein - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003164 412.0
BYD3_k127_8758546_39 Phage tail protein (Tail_P2_I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001453 408.0
BYD3_k127_8758546_4 Annexin repeats - - - 0.0 1101.0
BYD3_k127_8758546_40 Belongs to the FPP GGPP synthase family K02523 - 2.5.1.90 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000849 376.0
BYD3_k127_8758546_41 COG3497 Phage tail sheath protein FI K06907 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001152 385.0
BYD3_k127_8758546_42 Protein of unknown function (DUF1501) - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006383 374.0
BYD3_k127_8758546_43 COG3000 Sterol desaturase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006643 349.0
BYD3_k127_8758546_44 Phage late control gene D protein (GPD) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007963 361.0
BYD3_k127_8758546_45 Belongs to the pirin family K06911 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003076 334.0
BYD3_k127_8758546_46 ABC transporter K02049 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001308 333.0
BYD3_k127_8758546_47 Putative esterase K07017 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002425 327.0
BYD3_k127_8758546_48 TIGRFAM Urea carboxylase-associated protein 1 K09967 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001056 320.0
BYD3_k127_8758546_49 Binding-protein-dependent transport system inner membrane component K02050 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006137 321.0
BYD3_k127_8758546_5 Bacterial protein of unknown function (DUF839) K07093 - - 7.144e-320 996.0
BYD3_k127_8758546_50 Putative diguanylate phosphodiesterase K21023 - 2.7.7.65 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004355 341.0
BYD3_k127_8758546_51 transmembrane spans. The family include ribonuclease BN that is involved in tRNA maturation P32146. This family of proteins does not seem to contain any completely conserved polar residues that would be expected in a nuclease enzyme, suggesting that many members of this family may not have this catalytic activity K07058 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007796 307.0
BYD3_k127_8758546_52 TIGRFAM urea carboxylase-associated protein 2 K09967 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000001084 302.0
BYD3_k127_8758546_53 FAD dependent oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000001787 298.0
BYD3_k127_8758546_54 Bacterial regulatory protein, Fis family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000005441 276.0
BYD3_k127_8758546_55 Domain of Unknown Function (DUF1080) - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000004861 268.0
BYD3_k127_8758546_56 hydrogenase 4 membrane K12140 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000001785 259.0
BYD3_k127_8758546_57 NADH ubiquinone oxidoreductase 20 kDa subunit - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000386 252.0
BYD3_k127_8758546_58 Sulfatase-modifying factor enzyme 1 - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000009951 266.0
BYD3_k127_8758546_59 Belongs to the ribF family K11753 - 2.7.1.26,2.7.7.2 0.000000000000000000000000000000000000000000000000000000000000000000000005814 261.0
BYD3_k127_8758546_6 PFAM sulfatase K01130 - 3.1.6.1 1.148e-271 843.0
BYD3_k127_8758546_60 cytochrome - - - 0.0000000000000000000000000000000000000000000000000000000000000000000002963 253.0
BYD3_k127_8758546_62 PFAM Peptidoglycan-binding - - - 0.0000000000000000000000000000000000000000000000000000000000000000004362 237.0
BYD3_k127_8758546_63 Phage tail protein (Tail_P2_I) - - - 0.0000000000000000000000000000000000000000000000000000000000000000004469 246.0
BYD3_k127_8758546_64 - - - - 0.000000000000000000000000000000000000000000000000000000000000000003886 254.0
BYD3_k127_8758546_65 Transcriptional regulator K18900 - - 0.0000000000000000000000000000000000000000000000000000000000000004016 244.0
BYD3_k127_8758546_66 - - - - 0.000000000000000000000000000000000000000000000000000000000000001087 233.0
BYD3_k127_8758546_67 Lipid A biosynthesis acyltransferase K02517 - 2.3.1.241 0.0000000000000000000000000000000000000000000000000000000000001636 222.0
BYD3_k127_8758546_68 T4-like virus tail tube protein gp19 - - - 0.000000000000000000000000000000000000000000000000000000325 197.0
BYD3_k127_8758546_69 Spermine/spermidine synthase domain K00797 - 2.5.1.16 0.00000000000000000000000000000000000000000000000000005775 201.0
BYD3_k127_8758546_7 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit - - - 1.315e-263 827.0
BYD3_k127_8758546_70 T4-like virus tail tube protein gp19 - - - 0.00000000000000000000000000000000000000000000000000006252 210.0
BYD3_k127_8758546_71 helix_turn_helix ASNC type - - - 0.000000000000000000000000000000000000000000000000005495 184.0
BYD3_k127_8758546_72 Belongs to the DNA glycosylase MPG family K03652 - 3.2.2.21 0.00000000000000000000000000000000000000000000000002079 199.0
BYD3_k127_8758546_73 Protein of unknown function (DUF4255) - - - 0.0000000000000000000000000000000000000000000000004804 188.0
BYD3_k127_8758546_74 amine dehydrogenase activity - - - 0.0000000000000000000000000000000000000000000003894 186.0
BYD3_k127_8758546_75 This protein specifically catalyzes the removal of signal peptides from prolipoproteins K03101 - 3.4.23.36 0.000000000000000000000000000000000000000000001385 171.0
BYD3_k127_8758546_76 Water Stress and Hypersensitive response - - - 0.000000000000000000000000000000000000000000005247 168.0
BYD3_k127_8758546_77 Gene 25-like lysozyme K06903 - - 0.000000000000000000000000000000000000000007904 168.0
BYD3_k127_8758546_78 Activator of Hsp90 ATPase homolog 1-like protein - - - 0.0000000000000000000000000000000000000006153 158.0
BYD3_k127_8758546_79 Dienelactone hydrolase family - - - 0.000000000000000000000000000000000000001179 163.0
BYD3_k127_8758546_8 gamma-glutamyltransferase K00681 - 2.3.2.2,3.4.19.13 1.754e-254 795.0
BYD3_k127_8758546_80 Protein of unknown function (DUF1254) - - - 0.00000000000000000000000000000000000003334 149.0
BYD3_k127_8758546_81 This protein binds to 23S rRNA in the presence of protein L20 K02888 - - 0.0000000000000000000000000000000000006375 143.0
BYD3_k127_8758546_82 - - - - 0.0000000000000000000000000000000000008035 162.0
BYD3_k127_8758546_83 Diguanylate cyclase phosphodiesterase with PAS PAC sensor(S) - - - 0.000000000000000000000000000000000001265 155.0
BYD3_k127_8758546_84 Belongs to the bacterial ribosomal protein bL27 family K02899 GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.0000000000000000000000000000000001592 134.0
BYD3_k127_8758546_85 - - - - 0.0000000000000000000000000000000005867 150.0
BYD3_k127_8758546_86 Rhs element Vgr protein - - - 0.0000000000000000000000000000008278 134.0
BYD3_k127_8758546_87 Putative lumazine-binding - - - 0.00000000000000000000000000000229 131.0
BYD3_k127_8758546_88 belongs to the Fur family K09826 - - 0.0000000000000000000000000001062 127.0
BYD3_k127_8758546_89 Protein of unknown function (DUF1254) K03929 - - 0.00000000000000000000000171 103.0
BYD3_k127_8758546_9 Formate hydrogenlyase subunit 3 Multisubunit Na H antiporter, MnhD subunit K12141 - - 1.031e-243 762.0
BYD3_k127_8758546_90 PFAM EamA-like transporter family - - - 0.0000000000000000000001941 102.0
BYD3_k127_8758546_91 Binds directly to 16S ribosomal RNA K02968 GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0004857,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008073,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030234,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0042979,GO:0043043,GO:0043086,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0050790,GO:0065003,GO:0065007,GO:0065009,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:0098772,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - 0.00000000000000000001118 94.0
BYD3_k127_8758546_92 - - - - 0.000000000000000001618 98.0
BYD3_k127_8758546_93 PFAM CopG domain protein DNA-binding domain protein - - - 0.000000000000000003163 86.0
BYD3_k127_8758546_94 amine dehydrogenase activity K20276 - - 0.0000000000000000109 98.0
BYD3_k127_8758546_95 - - - - 0.00000000000002426 82.0
BYD3_k127_8758546_96 LysR substrate binding domain - - - 0.00000000000005859 76.0
BYD3_k127_8758546_97 Type IV Pilus-assembly protein W K02672 - - 0.000000000001169 79.0
BYD3_k127_8758546_98 COG4970 Tfp pilus assembly protein FimT K08084 - - 0.0000000001283 73.0
BYD3_k127_8758546_99 TIGRFAM type IV pilus modification protein PilV K02671 - - 0.0000000006552 70.0
BYD3_k127_878107_0 Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol K06131 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007262 362.0
BYD3_k127_878107_1 von Willebrand factor (vWF) type A domain K07114 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005247 350.0
BYD3_k127_878107_10 Response regulator receiver - - - 0.00000000000000000000000764 107.0
BYD3_k127_878107_11 PFAM AAA ATPase central domain protein - - - 0.000000000000000000004533 100.0
BYD3_k127_878107_12 OmpA-like transmembrane domain - - - 0.000000000000001858 86.0
BYD3_k127_878107_13 UPF0391 membrane protein - - - 0.000000000000003992 76.0
BYD3_k127_878107_14 Bacterial protein of unknown function (DUF883) - - - 0.000000001039 63.0
BYD3_k127_878107_15 Bacterioferritin (cytochrome b1) K03594 - 1.16.3.1 0.0001576 49.0
BYD3_k127_878107_2 Glutathione S-transferase, C-terminal domain K00799,K11209 - 2.5.1.18 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000002102 297.0
BYD3_k127_878107_3 response regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000103 245.0
BYD3_k127_878107_4 Destroys radicals which are normally produced within the cells and which are toxic to biological systems K04564 - 1.15.1.1 0.0000000000000000000000000000000000000000000000000000000005007 209.0
BYD3_k127_878107_5 conserved protein - - - 0.00000000000000000000000000000000000000000000000000001105 202.0
BYD3_k127_878107_6 Histidine kinase K05962 - 2.7.13.1 0.0000000000000000000000000000000000000000000005297 175.0
BYD3_k127_878107_7 bacterial OsmY and nodulation domain K04065 - - 0.00000000000000000000000000004954 123.0
BYD3_k127_878107_8 Peptidase C14 caspase catalytic subunit p20 - - - 0.00000000000000000000000008551 118.0
BYD3_k127_878107_9 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity - - - 0.000000000000000000000007612 105.0
BYD3_k127_8855941_0 Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln) K02434 - 6.3.5.6,6.3.5.7 8.124e-231 735.0
BYD3_k127_8855941_1 Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln) K02433 - 6.3.5.6,6.3.5.7 1.9e-218 687.0
BYD3_k127_8855941_10 Belongs to the peptidase S11 family K07258 - 3.4.16.4 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001771 381.0
BYD3_k127_8855941_11 Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid K00486 GO:0003674,GO:0003824,GO:0004497,GO:0008150,GO:0008152,GO:0009058,GO:0016491,GO:0019748,GO:0044550,GO:0055114 1.14.13.9 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001828 377.0
BYD3_k127_8855941_12 Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation K03771 - 5.2.1.8 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006577 374.0
BYD3_k127_8855941_13 Histidine kinase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001451 357.0
BYD3_k127_8855941_14 Transcriptional regulator - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005883 352.0
BYD3_k127_8855941_15 Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP K01525 - 3.6.1.41 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001874 319.0
BYD3_k127_8855941_16 guanyl-nucleotide exchange factor activity - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002153 343.0
BYD3_k127_8855941_17 Phosphotransferase K07102 - 2.7.1.221 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000002008 308.0
BYD3_k127_8855941_18 PFAM Aminotransferase, class IV K00824 - 2.6.1.21 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000001136 285.0
BYD3_k127_8855941_19 PFAM Nucleotidyl transferase K00992 - 2.7.7.99 0.000000000000000000000000000000000000000000000000000000000000000000000000000000006255 275.0
BYD3_k127_8855941_2 TIGRFAM Cell shape determining protein MreB Mrl K03569 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000807 556.0
BYD3_k127_8855941_20 Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits K02528 GO:0000028,GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0003729,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016043,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0031167,GO:0032259,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043170,GO:0043412,GO:0043414,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0065003,GO:0070475,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0140098,GO:0140102,GO:1901360,GO:1901363 2.1.1.182 0.0000000000000000000000000000000000000000000000000000000000000000000000000002233 267.0
BYD3_k127_8855941_21 Catalyzes the oxidative ring opening of 3- hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate K00452 - 1.13.11.6 0.000000000000000000000000000000000000000000000000000000000000000000000000009995 256.0
BYD3_k127_8855941_22 lytic murein transglycosylase B K08305 - - 0.0000000000000000000000000000000000000000000000000000000000000000000001717 269.0
BYD3_k127_8855941_23 Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate K03801 - 2.3.1.181 0.000000000000000000000000000000000000000000000000000000000000000000000646 260.0
BYD3_k127_8855941_24 Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress K04083 - - 0.0000000000000000000000000000000000000000000000000000000000000003984 243.0
BYD3_k127_8855941_25 Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides K03642 - - 0.0000000000000000000000000000000000000000000000000000000000000009549 229.0
BYD3_k127_8855941_26 ApaG domain K06195 - - 0.000000000000000000000000000000000000000000000000000000001758 201.0
BYD3_k127_8855941_27 Involved in formation and maintenance of cell shape K03570 - - 0.0000000000000000000000000000000000000000000000000000004067 207.0
BYD3_k127_8855941_28 arylformamidase activity - - - 0.00000000000000000000000000000000000000000001698 171.0
BYD3_k127_8855941_29 Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors K03814,K05365 - 2.4.1.129,3.4.16.4 0.00000000000000000000000000000000000000004089 155.0
BYD3_k127_8855941_3 Catalyzes cross-linking of the peptidoglycan cell wall K05515 - 3.4.16.4 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001087 571.0
BYD3_k127_8855941_30 - - - - 0.000000000000000000000000000000000003774 145.0
BYD3_k127_8855941_31 protein conserved in bacteria - - - 0.000000000000000000000000000000000005326 154.0
BYD3_k127_8855941_32 alpha-L-arabinofuranosidase - - - 0.00000000000000000000000000004021 137.0
BYD3_k127_8855941_33 Glu-tRNAGln amidotransferase C subunit - - - 0.0000000000000000000000001817 108.0
BYD3_k127_8855941_34 Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins K03571 - - 0.00000000000000000006741 103.0
BYD3_k127_8855941_35 Belongs to the UPF0250 family K09158 - - 0.00000002788 65.0
BYD3_k127_8855941_4 Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane K04744 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007369 487.0
BYD3_k127_8855941_5 Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively K01556 GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006569,GO:0006576,GO:0006586,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009063,GO:0009072,GO:0009074,GO:0009308,GO:0009310,GO:0009987,GO:0016054,GO:0016787,GO:0016822,GO:0016823,GO:0019439,GO:0019441,GO:0019752,GO:0030429,GO:0032787,GO:0034641,GO:0042180,GO:0042402,GO:0042430,GO:0042436,GO:0042537,GO:0043420,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044248,GO:0044270,GO:0044281,GO:0044282,GO:0044424,GO:0044464,GO:0046218,GO:0046395,GO:0046483,GO:0046700,GO:0070189,GO:0071704,GO:1901360,GO:1901361,GO:1901564,GO:1901565,GO:1901575,GO:1901605,GO:1901606 3.7.1.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003408 465.0
BYD3_k127_8855941_6 Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives K03644 - 2.8.1.8 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001157 465.0
BYD3_k127_8855941_7 Belongs to the peptidase S8 family - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005197 450.0
BYD3_k127_8855941_8 Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP) K00097 - 1.1.1.262 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008524 402.0
BYD3_k127_8855941_9 Peptidoglycan polymerase that is essential for cell wall elongation K05837 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000255 397.0
BYD3_k127_8909469_0 TIGRFAM proton-translocating NADH-quinone oxidoreductase, chain L K00341 - 1.6.5.3 6.352e-255 804.0
BYD3_k127_8909469_1 TIGRFAM NADH-quinone oxidoreductase, chain G K00336 - 1.6.5.3 1.287e-246 786.0
BYD3_k127_8909469_10 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00338 - 1.6.5.3 0.000000000000000000000000000000000000000000000000000000000000000000000000003579 256.0
BYD3_k127_8909469_11 TIGRFAM NADH-quinone oxidoreductase, E subunit K00334 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000003577 255.0
BYD3_k127_8909469_12 Belongs to the complex I subunit 6 family K00339 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000452 206.0
BYD3_k127_8909469_13 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 - 5.4.2.10 0.0000000000000000000000000000000000000000000000000000003816 198.0
BYD3_k127_8909469_14 Carboxypeptidase regulatory-like domain - - - 0.000000000000000000000000000000000002308 151.0
BYD3_k127_8909469_15 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00340 GO:0003674,GO:0003824,GO:0003954,GO:0005575,GO:0005623,GO:0005886,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0015980,GO:0016020,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0022900,GO:0022904,GO:0030964,GO:0032991,GO:0034641,GO:0042773,GO:0042775,GO:0044237,GO:0044238,GO:0044281,GO:0044425,GO:0044459,GO:0044464,GO:0045271,GO:0045272,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0070469,GO:0070470,GO:0071704,GO:0071944,GO:0072521,GO:0098796,GO:0098797,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204 1.6.5.3 0.00000000000000000000000000000000003003 146.0
BYD3_k127_8909469_16 Preprotein translocase subunit SecG K03075 - - 0.0000000000000000005491 91.0
BYD3_k127_8909469_17 - - - - 0.0000001815 53.0
BYD3_k127_8909469_2 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00333 - 1.6.5.3 4.484e-237 749.0
BYD3_k127_8909469_3 NADH ubiquinone oxidoreductase subunit K00342 - 1.6.5.3 1.724e-227 717.0
BYD3_k127_8909469_4 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain K00335 - 1.6.5.3 6.516e-201 638.0
BYD3_k127_8909469_5 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone K00337 - 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001028 453.0
BYD3_k127_8909469_6 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00343 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001966 420.0
BYD3_k127_8909469_7 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00331 - 1.6.5.3 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000678 310.0
BYD3_k127_8909469_8 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000003359 301.0
BYD3_k127_8909469_9 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00332 GO:0003674,GO:0003824,GO:0003954,GO:0006091,GO:0008137,GO:0008150,GO:0008152,GO:0009987,GO:0015980,GO:0016491,GO:0016651,GO:0016655,GO:0044237,GO:0045333,GO:0050136,GO:0055114 1.6.5.3 0.0000000000000000000000000000000000000000000000000000000000000000000000000003182 265.0
BYD3_k127_8951652_0 Glutamine synthetase, catalytic domain K01915 - 6.3.1.2 7.916e-219 686.0
BYD3_k127_8951652_1 Aldehyde dehydrogenase family - - - 6.275e-206 649.0
BYD3_k127_8951652_2 Iron-containing alcohol dehydrogenase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003741 465.0
BYD3_k127_9066769_0 Carbamoyl-phosphate synthetase ammonia chain K01955 GO:0000050,GO:0000166,GO:0003674,GO:0003824,GO:0004087,GO:0004088,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005951,GO:0006082,GO:0006139,GO:0006206,GO:0006220,GO:0006221,GO:0006520,GO:0006525,GO:0006526,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009112,GO:0009117,GO:0009165,GO:0009218,GO:0009220,GO:0009259,GO:0009260,GO:0009987,GO:0016053,GO:0016597,GO:0016874,GO:0016879,GO:0016884,GO:0017076,GO:0018130,GO:0019438,GO:0019627,GO:0019637,GO:0019693,GO:0019752,GO:0019856,GO:0030554,GO:0031406,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0034641,GO:0034654,GO:0035639,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046112,GO:0046390,GO:0046394,GO:0046483,GO:0046872,GO:0055086,GO:0071704,GO:0071941,GO:0072527,GO:0072528,GO:0090407,GO:0097159,GO:0097367,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607,GO:1902494 6.3.5.5 0.0 1616.0
BYD3_k127_9066769_1 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 0.0 1092.0
BYD3_k127_9066769_10 DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity K02343 - 2.7.7.7 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003084 537.0
BYD3_k127_9066769_11 ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins K03686 GO:0000988,GO:0000989,GO:0003674,GO:0003756,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006457,GO:0006458,GO:0006725,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009059,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010556,GO:0015035,GO:0015036,GO:0016020,GO:0016032,GO:0016043,GO:0016491,GO:0016667,GO:0016853,GO:0016860,GO:0016864,GO:0016989,GO:0019219,GO:0019222,GO:0022607,GO:0031323,GO:0031326,GO:0032991,GO:0034641,GO:0034645,GO:0042026,GO:0043167,GO:0043169,GO:0043170,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044403,GO:0044419,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051704,GO:0055114,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:0090304,GO:0140096,GO:0140110,GO:1901360,GO:1901576,GO:1903506,GO:2001141 - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001444 496.0
BYD3_k127_9066769_12 Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate K03431 GO:0003674,GO:0003824,GO:0004614,GO:0004615,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006040,GO:0006047,GO:0006048,GO:0006139,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008966,GO:0009058,GO:0009225,GO:0009226,GO:0009987,GO:0016310,GO:0016853,GO:0016866,GO:0016868,GO:0018130,GO:0019438,GO:0019538,GO:0034641,GO:0034654,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046349,GO:0046483,GO:0046777,GO:0055086,GO:0071704,GO:1901135,GO:1901137,GO:1901360,GO:1901362,GO:1901564,GO:1901576 5.4.2.10 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005453 486.0
BYD3_k127_9066769_13 FAD linked oxidase - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001602 471.0
BYD3_k127_9066769_14 PFAM fumarylacetoacetate (FAA) hydrolase K18336 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004007 420.0
BYD3_k127_9066769_15 May be involved in recombinational repair of damaged DNA K03631 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004235 441.0
BYD3_k127_9066769_16 CHASE4 domain - - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001285 427.0
BYD3_k127_9066769_17 Nitrilase cyanide hydratase and apolipoprotein N-acyltransferase K12251 - 3.5.1.53 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002658 407.0
BYD3_k127_9066769_18 Domain of Unknown Function (DUF1080) - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002978 395.0
BYD3_k127_9066769_19 Negative regulator of class I heat shock genes (grpE- dnaK-dnaJ and groELS operons). Prevents heat-shock induction of these operons K03705 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000609 371.0
BYD3_k127_9066769_2 Heat shock 70 kDa protein K04043 GO:0000166,GO:0000988,GO:0000989,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005886,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008144,GO:0008150,GO:0008270,GO:0009266,GO:0009408,GO:0009628,GO:0009889,GO:0009987,GO:0010033,GO:0010556,GO:0016020,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0016989,GO:0017076,GO:0017111,GO:0019219,GO:0019222,GO:0022607,GO:0030554,GO:0031323,GO:0031326,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033554,GO:0034620,GO:0035639,GO:0035966,GO:0035967,GO:0036094,GO:0042221,GO:0043167,GO:0043168,GO:0043169,GO:0043531,GO:0043933,GO:0044085,GO:0044183,GO:0044424,GO:0044444,GO:0044464,GO:0046872,GO:0046914,GO:0050789,GO:0050794,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0051171,GO:0051252,GO:0051716,GO:0060255,GO:0061077,GO:0065003,GO:0065007,GO:0070887,GO:0071310,GO:0071840,GO:0071944,GO:0080090,GO:0097159,GO:0097367,GO:0140110,GO:1901265,GO:1901363,GO:1903506,GO:2001141 - 2.711e-308 956.0
BYD3_k127_9066769_20 Oxidoreductase family, NAD-binding Rossmann fold K09949 - - 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002938 356.0
BYD3_k127_9066769_21 Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives K00796 GO:0003674,GO:0003824,GO:0004156,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006575,GO:0006725,GO:0006732,GO:0006760,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009110,GO:0009396,GO:0009987,GO:0016053,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042221,GO:0042364,GO:0042398,GO:0042493,GO:0042558,GO:0042559,GO:0043436,GO:0043603,GO:0043604,GO:0043648,GO:0043650,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046653,GO:0046654,GO:0046655,GO:0046656,GO:0050896,GO:0051186,GO:0051188,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.15 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001155 332.0
BYD3_k127_9066769_22 Oxidoreductase - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004704 333.0
BYD3_k127_9066769_23 Threonine dehydratase K01754 - 4.3.1.19 0.00000000000000000000000000000000000000000000000000000000000000000000000000000000000000002444 306.0
BYD3_k127_9066769_24 Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) K01803 - 5.3.1.1 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000996 299.0
BYD3_k127_9066769_25 Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state - - - 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000004114 300.0
BYD3_k127_9066769_26 Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) K01714 GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006553,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008840,GO:0009058,GO:0009066,GO:0009067,GO:0009085,GO:0009089,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0019877,GO:0042802,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046451,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.3.7 0.00000000000000000000000000000000000000000000000000000000000000000000000000004073 279.0
BYD3_k127_9066769_27 Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - 0.0000000000000000000000000000000000000000000000000000000000000000000000000004306 269.0
BYD3_k127_9066769_28 Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP K00858 - 2.7.1.23 0.0000000000000000000000000000000000000000000000000000000000000000000000000004511 265.0
BYD3_k127_9066769_29 May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO K06187 - - 0.000000000000000000000000000000000000000000000000000000000000000000000000002987 257.0
BYD3_k127_9066769_3 Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins K03798 - - 4.796e-295 917.0
BYD3_k127_9066769_30 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain K02483,K07661 - - 0.0000000000000000000000000000000000000000000000000000000000000000000000001423 265.0
BYD3_k127_9066769_31 3'-to-5' exoribonuclease specific for small oligoribonucleotides K13288 GO:0000175,GO:0003674,GO:0003824,GO:0004518,GO:0004527,GO:0004529,GO:0004532,GO:0004536,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006401,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008296,GO:0008297,GO:0008310,GO:0008408,GO:0008946,GO:0009056,GO:0009057,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0016896,GO:0019439,GO:0034611,GO:0034641,GO:0034655,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0046700,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090503,GO:0140097,GO:0140098,GO:1901360,GO:1901361,GO:1901575 - 0.00000000000000000000000000000000000000000000000000000000000000000000001301 252.0
BYD3_k127_9066769_32 (Lipo)protein K04754 - - 0.000000000000000000000000000000000000000000000000000000000000000000001742 245.0
BYD3_k127_9066769_33 Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides K03624 - - 0.000000000000000000000000000000000000000000000000000000000003522 213.0
BYD3_k127_9066769_34 Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate K00215 - 1.17.1.8 0.000000000000000000000000000000000000000000000000000000000005026 217.0
BYD3_k127_9066769_35 Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene K03664 - - 0.00000000000000000000000000000000000000000000000000000000006118 217.0
BYD3_k127_9066769_36 Belongs to the Fur family K03711 - - 0.000000000000000000000000000000000000000000000000000000000085 208.0
BYD3_k127_9066769_37 One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit K06949 - 3.1.3.100 0.00000000000000000000000000000000000000000000000000000002348 209.0
BYD3_k127_9066769_38 PFAM Amino acid-binding ACT K03567 - - 0.0000000000000000000000000000000000000000000000000007237 190.0
BYD3_k127_9066769_39 Histidine kinase K02484,K07639,K18072 - 2.7.13.3 0.000000000000000000000000000000000000000000000000002497 199.0
BYD3_k127_9066769_4 Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family K03296 - - 6.769e-238 770.0
BYD3_k127_9066769_40 alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen K03564 - 1.11.1.15 0.00000000000000000000000000000000000000000000000001624 189.0
BYD3_k127_9066769_41 Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ K03687 - - 0.0000000000000000000000000000000000001688 149.0
BYD3_k127_9066769_42 Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection K09747 - - 0.000000000000000000000000000000000005278 139.0
BYD3_k127_9066769_43 COG2867 Oligoketide cyclase lipid transport protein - GO:0003674,GO:0005488,GO:0006417,GO:0006446,GO:0008150,GO:0009889,GO:0009890,GO:0009892,GO:0010468,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0017148,GO:0019222,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032269,GO:0034248,GO:0034249,GO:0043021,GO:0043023,GO:0044877,GO:0045947,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051248,GO:0060255,GO:0065007,GO:0080090,GO:2000112,GO:2000113 - 0.000000000000000000000000000000000007378 141.0
BYD3_k127_9066769_44 PFAM MltA-interacting MipA family protein K07274 - - 0.00000000000000000000000000000001385 141.0
BYD3_k127_9066769_45 NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient K00330 - 1.6.5.3 0.000000000000000000000000000001094 123.0
BYD3_k127_9066769_46 SAF - - - 0.000000000000000000000000000007311 121.0
BYD3_k127_9066769_47 dithiol-disulfide isomerase involved in polyketide biosynthesis - - - 0.00000000000000000000000000009021 124.0
BYD3_k127_9066769_48 Acid phosphatase homologues K09474 - 3.1.3.2 0.0000000000000000000000000001285 134.0
BYD3_k127_9066769_49 protein conserved in bacteria K09920 - - 0.000000000000000000000009207 107.0
BYD3_k127_9066769_5 SMART Nucleotide binding protein, PINc K07175 - - 1.067e-213 674.0
BYD3_k127_9066769_50 RNA-binding protein K07574 - - 0.0000000000000000000001944 102.0
BYD3_k127_9066769_51 PFAM Preprotein translocase SecG subunit K03075 - - 0.000000000000000001584 89.0
BYD3_k127_9066769_52 Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane K06186 - - 0.000000000000000003052 91.0
BYD3_k127_9066769_53 Helix-turn-helix domain K07729 - - 0.0000000000000002661 83.0
BYD3_k127_9066769_54 Belongs to the UPF0125 (RnfH) family K09801 - - 0.00000000000004102 76.0
BYD3_k127_9066769_55 Protein of unknown function (DUF3019) - - - 0.0000003196 57.0
BYD3_k127_9066769_56 Calmodulin-like 5 K02183 GO:0001775,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0003674,GO:0005488,GO:0005509,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0006810,GO:0006887,GO:0006955,GO:0007154,GO:0007165,GO:0008150,GO:0008544,GO:0009888,GO:0009987,GO:0010033,GO:0012505,GO:0016192,GO:0023052,GO:0030141,GO:0031410,GO:0031974,GO:0031982,GO:0032502,GO:0032940,GO:0034097,GO:0036230,GO:0042119,GO:0042221,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043233,GO:0043299,GO:0043312,GO:0044422,GO:0044424,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0045055,GO:0045321,GO:0046872,GO:0046903,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051716,GO:0065007,GO:0070013,GO:0070887,GO:0071310,GO:0071345,GO:0097708,GO:0099503,GO:0101002,GO:1904813,GO:1990823,GO:1990830 - 0.000001347 53.0
BYD3_k127_9066769_57 Resolvase - - - 0.0003852 45.0
BYD3_k127_9066769_6 PFAM D-galactarate dehydratase Altronate hydrolase domain protein K01685 - 4.2.1.7 7.582e-197 622.0
BYD3_k127_9066769_7 Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate K00864 GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007847 609.0
BYD3_k127_9066769_8 Belongs to the peptidase S41A family K03797 - 3.4.21.102 0.0000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001399 574.0
BYD3_k127_9066769_9 carbamoyl-phosphate synthetase glutamine chain K01956 - 6.3.5.5 0.000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005753 540.0